# push `F2` on your keyboard to open interactive R session
q("no") # closes R session on head node
srun --x11 --partition=intel --mem=2gb --cpus-per-task 1 --ntasks 1 --time 07-0:00:00 --pty bash -l
RNow check whether your R session is running on a computer node of the cluster and not on a head node.
system("echo HOSTNAME HOSTNAME HOSTNAME HOSTNAME HOSTNAME HOSTNAME HOSTNAME")
system("hostname") # should return name of a compute node starting with i or c
getwd() # checks current working directory of R session## [1] "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq"dir() # returns content of current working directory## [1] "badresults"
## [2] "BattagliaREADME.Rmd"
## [3] "bibtex.bib"
## [4] "complex-css.css"
## [5] "complex-css.css~"
## [6] "data"
## [7] "DEGlist.RData"
## [8] "descv.RData"
## [9] "ego.RData"
## [10] "Ex_Files_Int_Presentations_Shiny_R"
## [11] "Ex_Files_Int_Presentations_Shiny_R.zip"
## [12] "FGSEA"
## [13] "GenomeAnnotation.PNG"
## [14] "ggo.RData"
## [15] "GOslimbarplotMF.pdf"
## [16] "GOstatsTutorial.R"
## [17] "GOstatsTutorial.R~"
## [18] "GSE4NGS_SlidyPresentation.html"
## [19] "GSE4NGS_SlidyPresentation.Rmd"
## [20] "GSE4NGS_SlidyPresentationV0831.html"
## [21] "GSE4NGS_SlidyPresentationV0831.Rmd"
## [22] "GSE4NGS_SlidyPresentationV2.html"
## [23] "GSE4NGS_SlidyPresentationV2.Rmd"
## [24] "GSE4NGS_SlidyPresentationV3.Rmd"
## [25] "GSE4NGS_SlidyPresentationV5.html"
## [26] "GSE4NGS_SlidyPresentationV5.Rmd"
## [27] "heatmap1.pdf"
## [28] "hstest.txt"
## [29] "Hypergeometric.tex"
## [30] "Hypergeometric.txt"
## [31] "jordan_history.txt"
## [32] "KEGG.gif"
## [33] "KEGG.jpg"
## [34] "knit.sh"
## [35] "knit.sh~"
## [36] "KnitrImages"
## [37] "Kolmogorov-Smirnov_ORIG.jpg"
## [38] "Kolmogorov-Smirnov.jpg"
## [39] "lec14a.pdf"
## [40] "Makefile"
## [41] "MARC-U-STAR_ORIG.png"
## [42] "MARC-U-STAR.png"
## [43] "my.stdout"
## [44] "myBatch.sh"
## [45] "myBatch.sh~"
## [46] "MyhyperGresult.html"
## [47] "myR.sh"
## [48] "NGS_ORIG.jpg"
## [49] "NGS_resize80x30percent.jpg"
## [50] "NIHlog_square.png"
## [51] "NIHlogo_long.jpg"
## [52] "param"
## [53] "PresentationNotes.txt"
## [54] "results"
## [55] "savehist.txt"
## [56] "setLinks.sh"
## [57] "setLinks.sh~"
## [58] "slidy"
## [59] "slidy.css"
## [60] "slidy.zip"
## [61] "slidyOLD.css"
## [62] "slurm.tmpl"
## [63] "str-edgeDF.txt"
## [64] "systemPipeR-Orig.PNG"
## [65] "systemPipeR-v2.PNG"
## [66] "systemPipeR-v3.PNG"
## [67] "systemPipeR.PNG"
## [68] "systemPipeRNAseq.pdf"
## [69] "systemPipeRNAseq.R"
## [70] "systemPipeRNAseq.Rmd"
## [71] "systemPipeRNAseq.Rmd~"
## [72] "systemPipeRNAseq.Rnw"
## [73] "systemPipeRNAseqIntegrateClusterProfiler_cache"
## [74] "systemPipeRNAseqIntegrateClusterProfiler_files"
## [75] "systemPipeRNAseqIntegrateClusterProfiler_good.html"
## [76] "systemPipeRNAseqIntegrateClusterProfiler_plants_mart.Rmd"
## [77] "systemPipeRNAseqIntegrateClusterProfiler_saveSessionInfo4oldVersion.html"
## [78] "systemPipeRNAseqIntegrateClusterProfiler.allchunks.html"
## [79] "systemPipeRNAseqIntegrateClusterProfiler.html"
## [80] "systemPipeRNAseqIntegrateClusterProfiler.Rmd"
## [81] "systemPipeRNAseqIntegrateClusterProfiler.Rmd~"
## [82] "systemPipeRNAseqJianhaiYAML.Rmd"
## [83] "systemPipeRNAseqWalltimeFixed.Rmd"
## [84] "targets_trim.txt"
## [85] "targets.txt"
## [86] "targetsPE_Gordon.txt"
## [87] "targetsPE.txt"
## [88] "test.Rmd"
## [89] "toydata"
## [90] "toyresults"
## [91] "UCRlogo_long.png"
## [92] "UMBCslidy.css"
## [93] "w3c-blue.css"readline("Press <Enter> to continue.")## Press <Enter> to continue.## [1] ""sort( sapply(ls(),function(x){object.size(get(x))}))
sort( sapply(mget(ls()),object.size) )
sort(sapply(ls(), function(x) format(object.size(get(x)), unit = 'auto')))
library(RenvCheck) # Jordan's environment checker for systemPipeR
detach(package:RenvCheck)
search() # list loaded libraries
rm(counteByg); rm(align); rm(fqlist); rm(desc); rm(speciesMap);
rm(BatchResult); rm(BatchResultslim); rm(catdb)
save.image()## DOSE v3.6.1 For help: https://guangchuangyu.github.io/DOSE
##
## If you use DOSE in published research, please cite:
## Guangchuang Yu, Li-Gen Wang, Guang-Rong Yan, Qing-Yu He. DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics 2015, 31(4):608-609Note: the most recent version of this tutorial can be found here and a short overview slide show here.
1 Introduction
Users want to provide here background information about the design of their RNA-Seq project.
2 Samples and environment settings
2.1 Environment settings and input data
Typically, the user wants to record here the sources and versions of the reference genome sequence along with the corresponding annotations. In the provided sample data set all data inputs are stored in a data subdirectory and all results will be written to a separate results directory, while the systemPipeRNAseq.Rmd script and the targets file are expected to be located in the parent directory. The R session is expected to run from this parent directory.
To run this sample report, mini sample FASTQ and reference genome files can be downloaded from here. The chosen data set SRP010938 contains 18 paired-end (PE) read sets from Arabidposis thaliana (Howard et al. 2013). To minimize processing time during testing, each FASTQ file has been subsetted to 90,000-100,000 randomly sampled PE reads that map to the first 100,000 nucleotides of each chromosome of the A. thalina genome. The corresponding reference genome sequence (FASTA) and its GFF annotion files (provided in the same download) have been truncated accordingly. This way the entire test sample data set is less than 200MB in storage space. A PE read set has been chosen for this test data set for flexibility, because it can be used for testing both types of analysis routines requiring either SE (single end) reads or PE reads.
The following loads one of the available NGS workflow templates (here RNA-Seq) into the user’s current working directory. At the moment, the package includes workflow templates for RNA-Seq, ChIP-Seq, VAR-Seq and Ribo-Seq. Templates for additional NGS applications will be provided in the future.
library(systemPipeRdata)
genWorkenvir(workflow="rnaseq")
setwd("rnaseq")Alternatively, this can be done from the command-line as follows:
Rscript -e "systemPipeRdata::genWorkenvir(workflow='rnaseq')"Now open the R markdown script systemPipeRNAseq.Rmdin your R IDE (e.g. vim-r or RStudio) and run the workflow as outlined below. If you work under Vim-R-Tmux, the following command sequence will connect the user in an interactive session with a node on the cluster. The code of the Rmd script can then be sent from Vim on the login (head) node to an open R session running on the corresponding computer node. This is important since Tmux sessions should not be run on the computer nodes.
NOTE: chunks node_environment and r_environment were here, now moved to top of file for convenience.
2.2 Required packages and resources
The systemPipeR package needs to be loaded to perform the analysis steps shown in this report (H Backman and Girke 2016).
library(systemPipeR)If applicable load custom functions not provided by
source("systemPipeRNAseq_Fct.R")2.3 Experiment definition provided by targets file
The targets file defines all FASTQ files and sample comparisons of the analysis workflow.
targetspath <- system.file("extdata", "targets.txt", package="systemPipeR")
targetspath
## [1] "/rhome/gdmosher/R/x86_64-pc-linux-gnu-library/3.5/systemPipeR/extdata/targets.txt"
# system('cat ') # dangerous, puts cat on stdin - hangs batch jobs
# system(paste0('cat ', targetspath))
cat(system('cat "/bigdata/bioinfo/pkgadmin/opt/linux/centos/7.x/x86_64/pkgs/R/3.4.0/lib64/R/library/systemPipeR/extdata/targets.txt"', intern = T), sep = '\n')
## # Project ID: Arabidopsis - Pseudomonas alternative splicing study (SRA: SRP010938; PMID: 24098335)
## # The following line(s) allow to specify the contrasts needed for comparative analyses, such as DEG identification. All possible comparisons can be specified with 'CMPset: ALL'.
## # <CMP> CMPset1: M1-A1, M1-V1, A1-V1, M6-A6, M6-V6, A6-V6, M12-A12, M12-V12, A12-V12
## # <CMP> CMPset2: ALL
## FileName SampleName Factor SampleLong Experiment Date
## ./data/SRR446027_1.fastq M1A M1 Mock.1h.A 1 23-Mar-2012
## ./data/SRR446028_1.fastq M1B M1 Mock.1h.B 1 23-Mar-2012
## ./data/SRR446029_1.fastq A1A A1 Avr.1h.A 1 23-Mar-2012
## ./data/SRR446030_1.fastq A1B A1 Avr.1h.B 1 23-Mar-2012
## ./data/SRR446031_1.fastq V1A V1 Vir.1h.A 1 23-Mar-2012
## ./data/SRR446032_1.fastq V1B V1 Vir.1h.B 1 23-Mar-2012
## ./data/SRR446033_1.fastq M6A M6 Mock.6h.A 1 23-Mar-2012
## ./data/SRR446034_1.fastq M6B M6 Mock.6h.B 1 23-Mar-2012
## ./data/SRR446035_1.fastq A6A A6 Avr.6h.A 1 23-Mar-2012
## ./data/SRR446036_1.fastq A6B A6 Avr.6h.B 1 23-Mar-2012
## ./data/SRR446037_1.fastq V6A V6 Vir.6h.A 1 23-Mar-2012
## ./data/SRR446038_1.fastq V6B V6 Vir.6h.B 1 23-Mar-2012
## ./data/SRR446039_1.fastq M12A M12 Mock.12h.A 1 23-Mar-2012
## ./data/SRR446040_1.fastq M12B M12 Mock.12h.B 1 23-Mar-2012
## ./data/SRR446041_1.fastq A12A A12 Avr.12h.A 1 23-Mar-2012
## ./data/SRR446042_1.fastq A12B A12 Avr.12h.B 1 23-Mar-2012
## ./data/SRR446043_1.fastq V12A V12 Vir.12h.A 1 23-Mar-2012
## ./data/SRR446044_1.fastq V12B V12 Vir.12h.B 1 23-Mar-2012
targets <- read.delim(targetspath, comment.char = "#")[,1:4] # all rows, 4 columns
str(targets)
## 'data.frame': 18 obs. of 4 variables:
## $ FileName : Factor w/ 18 levels "./data/SRR446027_1.fastq",..: 1 2 3 4 5 6 7 8 9 10 ...
## $ SampleName: Factor w/ 18 levels "A12A","A12B",..: 9 10 3 4 15 16 11 12 5 6 ...
## $ Factor : Factor w/ 9 levels "A1","A12","A6",..: 4 4 1 1 7 7 6 6 3 3 ...
## $ SampleLong: Factor w/ 18 levels "Avr.12h.A","Avr.12h.B",..: 9 10 3 4 15 16 11 12 5 6 ...
targets
## FileName SampleName Factor SampleLong
## 1 ./data/SRR446027_1.fastq M1A M1 Mock.1h.A
## 2 ./data/SRR446028_1.fastq M1B M1 Mock.1h.B
## 3 ./data/SRR446029_1.fastq A1A A1 Avr.1h.A
## 4 ./data/SRR446030_1.fastq A1B A1 Avr.1h.B
## 5 ./data/SRR446031_1.fastq V1A V1 Vir.1h.A
## 6 ./data/SRR446032_1.fastq V1B V1 Vir.1h.B
## 7 ./data/SRR446033_1.fastq M6A M6 Mock.6h.A
## 8 ./data/SRR446034_1.fastq M6B M6 Mock.6h.B
## 9 ./data/SRR446035_1.fastq A6A A6 Avr.6h.A
## 10 ./data/SRR446036_1.fastq A6B A6 Avr.6h.B
## 11 ./data/SRR446037_1.fastq V6A V6 Vir.6h.A
## 12 ./data/SRR446038_1.fastq V6B V6 Vir.6h.B
## 13 ./data/SRR446039_1.fastq M12A M12 Mock.12h.A
## 14 ./data/SRR446040_1.fastq M12B M12 Mock.12h.B
## 15 ./data/SRR446041_1.fastq A12A A12 Avr.12h.A
## 16 ./data/SRR446042_1.fastq A12B A12 Avr.12h.B
## 17 ./data/SRR446043_1.fastq V12A V12 Vir.12h.A
## 18 ./data/SRR446044_1.fastq V12B V12 Vir.12h.B
# now look inside the fastq.gz file at the seq ID, sequence and quality data
cat(system(paste0('gzip -cd ', targets[1,1], '.gz | head'), intern = T), sep = '\n')
## @SRR446027.1 HWI-EAS407_0126:7:17:1258:1056 length=75
## GGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCAAGAGTTATGCGGAATGATTG
## +SRR446027.1 HWI-EAS407_0126:7:17:1258:1056 length=75
## G4DDBEG>DGG8EGGDGGG<DDDE>@B/EA?:?:?A>AC5@@<@<BBE>B7>BAB####################
## @SRR446027.2 HWI-EAS407_0126:7:17:1744:1056 length=75
## TGCATCCCGTGCATGCCCTGGTGCTGCATCCCGTGCCCGCCCTGGTGCTGCATCCCGTGTATGTCGTGGTGCTGG
## +SRR446027.2 HWI-EAS407_0126:7:17:1744:1056 length=75
## H@HHHGGGBGHHH>HHHHHH><GDBEGGGGHFHHHHDHBGDDDGB<DDBGGEGEEFEEHE<BB@D##########
## @SRR446027.3 HWI-EAS407_0126:7:17:2201:1054 length=75
## CCCATCTTGGCCATGACAAGCTCACACTGGAAGGATTTACCTTGACCTTTGCCTCCCCATATACCCAAAATAAGT
cat(system('ls -l data/', intern = T), sep = '\n') # system output doesn't knit to html
## total 81798144
## -rw-r--r-- 1 gdmosher girkelab 1642 Jun 18 2018 getGENOMEdata.Rmd
## -rw-r--r-- 1 gdmosher girkelab 767 Jun 18 2018 getSRAdata.Rmd
## drwxr-xr-x 2 gdmosher girkelab 4096 Jun 20 2018 GO
## drwxr-xr-x 3 gdmosher girkelab 4096 Jun 18 2018 public
## -rw-r--r-- 1 gdmosher girkelab 4622164740 Jun 19 2018 SRR446027_1.fastq
## -rw-r--r-- 1 gdmosher girkelab 1189682813 Jun 18 2018 SRR446027_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1188685666 Jun 18 2018 SRR446027_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2306988208 Jun 18 2018 SRR446028_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2441738137 Jun 18 2018 SRR446028_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1776266283 Jun 18 2018 SRR446029_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1780158497 Jun 18 2018 SRR446029_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1884560507 Jun 18 2018 SRR446030_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1978872532 Jun 18 2018 SRR446030_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1540054712 Jun 18 2018 SRR446031_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1568016253 Jun 18 2018 SRR446031_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2400586504 Jun 18 2018 SRR446032_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2494560575 Jun 18 2018 SRR446032_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2445555522 Jun 18 2018 SRR446033_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2477573365 Jun 18 2018 SRR446033_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2495416905 Jun 18 2018 SRR446034_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2522937604 Jun 18 2018 SRR446034_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2242795890 Jun 18 2018 SRR446035_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2276755139 Jun 18 2018 SRR446035_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2333728000 Jun 19 2018 SRR446036_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2432407126 Jun 19 2018 SRR446036_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 3013855148 Jun 18 2018 SRR446037_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 3031993946 Jun 18 2018 SRR446037_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2696430388 Jun 18 2018 SRR446038_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2782899567 Jun 18 2018 SRR446038_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1038538049 Jun 18 2018 SRR446039_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1112906948 Jun 18 2018 SRR446039_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2936143350 Jun 19 2018 SRR446040_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 3026977391 Jun 19 2018 SRR446040_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2601689525 Jun 18 2018 SRR446041_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2576367463 Jun 18 2018 SRR446041_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2596366242 Jun 18 2018 SRR446042_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2680103306 Jun 18 2018 SRR446042_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1087481480 Jun 18 2018 SRR446043_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 1156193389 Jun 18 2018 SRR446043_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2126701811 Jun 19 2018 SRR446044_1.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 2187572774 Jun 19 2018 SRR446044_2.fastq.gz
## -rw-r--r-- 1 gdmosher girkelab 121183059 Nov 23 2010 TAIR10_chr_all.fas
## -rw-r--r-- 1 gdmosher girkelab 121163641 Jun 18 2018 tair10.fasta
## -rw-r--r-- 1 gdmosher girkelab 44026044 Jun 20 2018 tair10.fasta.1.bt2
## -rw-r--r-- 1 gdmosher girkelab 44026064 Mar 4 09:27 tair10.fasta.1.ht2
## -rw-r--r-- 1 gdmosher girkelab 29870392 Jun 20 2018 tair10.fasta.2.bt2
## -rw-r--r-- 1 gdmosher girkelab 29870392 Mar 4 09:27 tair10.fasta.2.ht2
## -rw-r--r-- 1 gdmosher girkelab 3257 Jun 20 2018 tair10.fasta.3.bt2
## -rw-r--r-- 1 gdmosher girkelab 3257 Mar 4 09:26 tair10.fasta.3.ht2
## -rw-r--r-- 1 gdmosher girkelab 29870386 Jun 20 2018 tair10.fasta.4.bt2
## -rw-r--r-- 1 gdmosher girkelab 29870386 Mar 4 09:26 tair10.fasta.4.ht2
## -rw-r--r-- 1 gdmosher girkelab 52471155 Mar 4 09:27 tair10.fasta.5.ht2
## -rw-r--r-- 1 gdmosher girkelab 30416490 Mar 4 09:27 tair10.fasta.6.ht2
## -rw-r--r-- 1 gdmosher girkelab 8 Mar 4 09:26 tair10.fasta.7.ht2
## -rw-r--r-- 1 gdmosher girkelab 8 Mar 4 09:26 tair10.fasta.8.ht2
## -rw-r--r-- 1 gdmosher girkelab 44026044 Jun 20 2018 tair10.fasta.rev.1.bt2
## -rw-r--r-- 1 gdmosher girkelab 29870392 Jun 20 2018 tair10.fasta.rev.2.bt2
## -rw-r--r-- 1 gdmosher girkelab 25396966 Jun 18 2018 tair10_functional_descriptions
## -rw-r--r-- 1 gdmosher girkelab 44139005 Jun 18 2018 tair10.gff
## -rw-r--r-- 1 gdmosher girkelab 19410944 Mar 4 09:59 tair10.sqlite
cat(system('ls -l', intern = T), sep = '\n') # system output doesn't knit to html
## total 45568
## drwxr-xr-x 2 gdmosher girkelab 4096 Jun 20 2018 badresults
## -rw-r--r-- 1 gdmosher girkelab 38014 Jul 6 2017 BattagliaREADME.Rmd
## -rw-r--r-- 1 gdmosher girkelab 15863 Jun 30 2017 bibtex.bib
## -rw-r--r-- 1 gdmosher girkelab 1159 Aug 15 2017 complex-css.css
## -rw-r--r-- 1 gdmosher girkelab 665 Aug 1 2017 complex-css.css~
## drwxr-xr-x 4 gdmosher girkelab 4096 Mar 4 09:59 data
## -rw-r--r-- 1 gdmosher girkelab 62089 Mar 4 10:02 DEGlist.RData
## -rw-r--r-- 1 gdmosher girkelab 583904 Mar 4 10:01 descv.RData
## -rw-r--r-- 1 gdmosher girkelab 442636 Sep 12 2017 ego.RData
## drwxr-xr-x 3 gdmosher girkelab 4096 Aug 1 2017 Ex_Files_Int_Presentations_Shiny_R
## -rw-r--r-- 1 gdmosher girkelab 577417 Aug 1 2017 Ex_Files_Int_Presentations_Shiny_R.zip
## drwxrwxr-x 3 gdmosher girkelab 4096 Feb 25 2018 FGSEA
## -rw-r--r-- 1 gdmosher girkelab 52675 Jul 31 2017 GenomeAnnotation.PNG
## -rw-r--r-- 1 gdmosher girkelab 1160 Sep 12 2017 ggo.RData
## -rw-r--r-- 1 gdmosher girkelab 10862 Mar 4 10:08 GOslimbarplotMF.pdf
## -rw-r--r-- 1 gdmosher girkelab 18437 Aug 14 2017 GOstatsTutorial.R
## -rw-r--r-- 1 gdmosher girkelab 18091 Aug 7 2017 GOstatsTutorial.R~
## -rw-r--r-- 1 gdmosher girkelab 810391 Aug 29 2017 GSE4NGS_SlidyPresentation.html
## -rw-r--r-- 1 gdmosher girkelab 8347 Aug 29 2017 GSE4NGS_SlidyPresentation.Rmd
## -rw-r--r-- 1 gdmosher girkelab 810391 Sep 1 2017 GSE4NGS_SlidyPresentationV0831.html
## -rw-r--r-- 1 gdmosher girkelab 8347 Sep 1 2017 GSE4NGS_SlidyPresentationV0831.Rmd
## -rw-r--r-- 1 gdmosher girkelab 744204 Aug 17 2017 GSE4NGS_SlidyPresentationV2.html
## -rw-r--r-- 1 gdmosher girkelab 8799 Aug 24 2017 GSE4NGS_SlidyPresentationV2.Rmd
## -rw-r--r-- 1 gdmosher girkelab 7446 Aug 25 2017 GSE4NGS_SlidyPresentationV3.Rmd
## -rw-r--r-- 1 gdmosher girkelab 810293 Aug 29 2017 GSE4NGS_SlidyPresentationV5.html
## -rw-r--r-- 1 gdmosher girkelab 8238 Aug 29 2017 GSE4NGS_SlidyPresentationV5.Rmd
## -rw-r--r-- 1 gdmosher girkelab 3611 Mar 4 10:18 heatmap1.pdf
## -rw-r--r-- 1 gdmosher girkelab 0 Jul 16 2017 hstest.txt
## -rw-r--r-- 1 gdmosher girkelab 2566 Aug 15 2017 Hypergeometric.tex
## -rw-r--r-- 1 gdmosher girkelab 3235 Sep 21 2017 Hypergeometric.txt
## -rw-r--r-- 1 gdmosher girkelab 986 Jul 12 2017 jordan_history.txt
## -rw-r--r-- 1 gdmosher girkelab 35770 Aug 28 2017 KEGG.gif
## -rw-r--r-- 1 gdmosher girkelab 75702 Aug 28 2017 KEGG.jpg
## drwxr-xr-x 2 gdmosher girkelab 4096 Aug 13 2017 KnitrImages
## -rwxrwxrwx 1 gdmosher girkelab 199 Jun 21 2018 knit.sh
## -rwxrwxrwx 1 gdmosher girkelab 199 Jun 19 2018 knit.sh~
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# dir()3 (3)Read preprocessing
3.1 Read quality filtering and trimming
The function preprocessReads allows to apply predefined or custom read preprocessing functions to all FASTQ files referenced in a SYSargs container, such as quality filtering or adaptor trimming routines. The following example performs adaptor trimming with the trimLRPatterns function from the Biostrings package. After the trimming step a new targets file is generated (here targets_trim.txt) containing the paths to the trimmed FASTQ files. The new targets file can be used for the next workflow step with an updated SYSargs instance, e.g. running the NGS alignments using the trimmed FASTQ files.
displayKnitStatus()
cat(system(paste0('cat param/trim.param'), intern = T), sep = '\n')
args <- systemArgs(sysma="param/trim.param", mytargets="targets.txt")
args
names(args); modules(args); cores(args); outpaths(args); sysargs(args)
showClass("SYSargs")
# next line takes approx 6 hours on alldata
systemPipeR::preprocessReads(args=args, Fct="Biostrings::trimLRPatterns(Rpattern='GCCCGGGTAA', subject=fq)",
batchsize=100000, overwrite=TRUE, compress=TRUE)
systemPipeR::writeTargetsout(x=args, file="targets_trim.txt", overwrite=TRUE)
outpaths(args)[1]
cat(system(paste0('cat targets_trim.txt'), intern = T), sep = '\n')
cat(system(paste0('zcat results/SRR446027_1.fastq_trim.gz | head'), intern = T), sep = '\n')3.2 FASTQ quality report
The following seeFastq and seeFastqPlot functions generate and plot a series of useful quality statistics for a set of FASTQ files including per cycle quality box lots, base proportions, base-level quality trends, relative k-mer diversity, length and occurrence distribution of reads, number of reads above quality cutoffs and mean quality distribution. The results are written to a PDF file named fastqReport.pdf.
displayKnitStatus()
#knitr::knit_exit()
cat(system(paste0('cat param/tophat.param'), intern = T), sep = '\n')
cat(system(paste0('cat targets.txt'), intern = T), sep = '\n')
args <- systemArgs(sysma="param/tophat.param", mytargets="targets.txt")
args
names(args); modules(args); cores(args); outpaths(args); sysargs(args)
names(args)
modules(args)
cores(args)
outpaths(args)
sysargs(args) # shows tophat calls
sysargs(args)[1] # Command-line parameters for first FASTQ file
cat('Next line takes time 6 minutes.\n') # takes 6 minutes, takes 25 min for alldata
displayKnitStatus()
fqlist <- systemPipeR::seeFastq(fastq=infile1(args), batchsize=100000, klength=8)
displayKnitStatus()
save(fqlist, file="data/GO/fqlist.RData") # GO folder must exist or this fails
load("data/GO/fqlist.RData")
cat('fqlist is a Large list (18 * 9 elements, 1.3 Mb)\n')
str(fqlist, max.level = 1)
str(fqlist[[1]])
if (FALSE) {
fqlist[[1]][1] # lots of data here, best to visualize with seeFastqPlot?
fqlist[['M1A']]['fqstats']
fqlist[['M1A']]['astats']
fqlist[['M1A']]['bstats']
fqlist[['M1A']]['cstats']
fqlist[['M1A']]['dstats']
fqlist[['M1A']]['estats']
fqlist[['M1A']]['fstats']
fqlist[['M1A']]['gstats']
fqlist[['M1A']]['hstats']
summary(fqlist)
summary(fqlist[['M1A']])
summary(fqlist[['M1A']][[1]])
summary(fqlist[['M1A']][[2]])
summary(fqlist[['M1A']][[3]])
summary(fqlist[['M1A']][[4]])
summary(fqlist[['M1A']][[5]])
summary(fqlist[['M1A']][[6]])
summary(fqlist[['M1A']][[7]])
summary(fqlist[['M1A']][[8]])
summary(fqlist[['M1A']][[9]])
}
pdf("./results/fastqReport.pdf", height=18, width=4*length(fqlist))
systemPipeR::seeFastqPlot(fqlist)
dev.off()
# Neerja help me read/understand the pdf contents
#knitr::knit_exit()
Figure 1: FASTQ quality report for 18 samples
4 (4)Alignments
4.1 Read mapping with Bowtie2/Tophat2
The NGS reads of this project will be aligned against the reference genome sequence using Bowtie2/TopHat2 (Kim et al. 2013; Langmead and Salzberg 2012). The parameter settings of the aligner are defined in the tophat.param file.
args <- systemArgs(sysma="param/tophat.param", mytargets="targets.txt")
sysargs(args)[1] # Command-line parameters for first FASTQ file## M1A
## "tophat -p 4 -g 1 --segment-length 25 -i 30 -I 3000 -o /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446027_1.fastq.gz.tophat /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446027_1.fastq.gz "Submission of alignment jobs to compute cluster, here using 72 CPU cores (18 qsub processes each with 4 CPU cores).
displayKnitStatus()
# ?moduleload
# q
args
modules(args)
systemPipeR::moduleload(modules(args))
# next line says Building a SMALL index
system('pwd')
cat(system("bowtie2-build ./data/tair10.fasta ./data/tair10.fasta > results/bowtie2-build.out 2> results/bowtie2-build.err", intern = T), sep = '\n')
system('pwd')
cat(system(paste0('cat results/bowtie2-build.err'), intern = T), sep = '\n')
cat(system(paste0('cat results/bowtie2-build.out'), intern = T), sep = '\n')
resources <- list(walltime="01:00:00", ntasks=1, ncpus=cores(args), memory="10G")
resources
args
names(args)
modules(args)
cores(args)
outpaths(args)
sysargs(args) # shows tophat calls
cat(system(paste0('cat .BatchJobs.R'), intern = T), sep = '\n')
cat(system(paste0('cat slurm.tmpl'), intern = T), sep = '\n')
reg <- systemPipeR::clusterRun(args, conffile=".BatchJobs.R", template="slurm.tmpl", Njobs=18, runid="01",
resourceList=resources) # takes about 63 min for alldata
# creates results/star.tophat # do I want to look at these also?
# don't submit for 20 hours on short-list!
# 1 minute
reg
waitForJobs(reg)4.2 Read mapping with HISAT2
displayKnitStatus()
args <- systemArgs(sysma="param/hisat2.param", mytargets="targets.txt")
cat(system(paste0('cat param/hisat2.param'), intern = T), sep = '\n')## ## Parameter file for HISAT2
## ## Values in <...> reference column titles in targets file
## PairSet Name Value
## modules NA hisat2/2.0.1
## software NA hisat2
## cores -p 4
## other NA -k 1 --min-intronlen 30 --max-intronlen 3000
## outfile1 -S <FileName1>
## outfile1 path ./results/
## outfile1 remove NA
## outfile1 append .hisat.sam
## outfile1 outextension .hisat.bam
## reference NA ./data/tair10.fasta
## infile1 -U <FileName1>
## infile1 path NA
## infile2 NA <FileName2>
## infile2 path NAnames(args)## [1] "targetsin" "targetsout" "targetsheader" "modules" "software" "cores"
## [7] "other" "reference" "results" "infile1" "infile2" "outfile1"
## [13] "sysargs" "outpaths"modules(args)## [1] "hisat2/2.0.1"cores(args)## [1] 4outpaths(args)## M1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446027_1.fastq.gz.hisat.bam"
## M1B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446028_1.fastq.gz.hisat.bam"
## A1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446029_1.fastq.gz.hisat.bam"
## A1B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446030_1.fastq.gz.hisat.bam"
## V1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446031_1.fastq.gz.hisat.bam"
## V1B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446032_1.fastq.gz.hisat.bam"
## M6A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446033_1.fastq.gz.hisat.bam"
## M6B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446034_1.fastq.gz.hisat.bam"
## A6A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446035_1.fastq.gz.hisat.bam"
## A6B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446036_1.fastq.gz.hisat.bam"
## V6A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446037_1.fastq.gz.hisat.bam"
## V6B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446038_1.fastq.gz.hisat.bam"
## M12A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446039_1.fastq.gz.hisat.bam"
## M12B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446040_1.fastq.gz.hisat.bam"
## A12A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446041_1.fastq.gz.hisat.bam"
## A12B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446042_1.fastq.gz.hisat.bam"
## V12A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446043_1.fastq.gz.hisat.bam"
## V12B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446044_1.fastq.gz.hisat.bam"sysargs(args) # shows hisat2 calls## M1A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446027_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446027_1.fastq.gz "
## M1B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446028_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446028_1.fastq.gz "
## A1A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446029_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446029_1.fastq.gz "
## A1B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446030_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446030_1.fastq.gz "
## V1A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446031_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446031_1.fastq.gz "
## V1B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446032_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446032_1.fastq.gz "
## M6A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446033_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446033_1.fastq.gz "
## M6B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446034_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446034_1.fastq.gz "
## A6A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446035_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446035_1.fastq.gz "
## A6B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446036_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446036_1.fastq.gz "
## V6A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446037_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446037_1.fastq.gz "
## V6B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446038_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446038_1.fastq.gz "
## M12A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446039_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446039_1.fastq.gz "
## M12B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446040_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446040_1.fastq.gz "
## A12A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446041_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446041_1.fastq.gz "
## A12B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446042_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446042_1.fastq.gz "
## V12A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446043_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446043_1.fastq.gz "
## V12B
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446044_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446044_1.fastq.gz "sysargs(args)[1] # Command-line parameters for first FASTQ file## M1A
## "hisat2 -p 4 -k 1 --min-intronlen 30 --max-intronlen 3000 -S /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446027_1.fastq.gz.hisat.sam /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/tair10.fasta -U /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/data/SRR446027_1.fastq.gz "moduleload(modules(args))
system('pwd')
cat(system("hisat2-build ./data/tair10.fasta ./data/tair10.fasta > results/hisat2-build.out 2> results/hisat2-build.err", intern = T), sep = '\n')system('pwd')
cat(system(paste0('cat results/hisat2-build.err'), intern = T), sep = '\n')## Settings:
## Output files: "./data/tair10.fasta.*.ht2"
## Line rate: 6 (line is 64 bytes)
## Lines per side: 1 (side is 64 bytes)
## Offset rate: 4 (one in 16)
## FTable chars: 10
## Strings: unpacked
## Local offset rate: 3 (one in 8)
## Local fTable chars: 6
## Local sequence length: 57344
## Local sequence overlap between two consecutive indexes: 1024
## Endianness: little
## Actual local endianness: little
## Sanity checking: disabled
## Assertions: disabled
## Random seed: 0
## Sizeofs: void*:8, int:4, long:8, size_t:8
## Input files DNA, FASTA:
## ./data/tair10.fasta
## Reading reference sizes
## Time reading reference sizes: 00:00:01
## Calculating joined length
## Writing header
## Reserving space for joined string
## Joining reference sequences
## Time to join reference sequences: 00:00:01
## Time to read SNPs and splice sites: 00:00:00
## Doing ahead-of-time memory usage test
## Passed! Constructing with these parameters: --bmax 22402789 --dcv 1024
## Constructing suffix-array element generator
## Converting suffix-array elements to index image
## Allocating ftab, absorbFtab
## Entering GFM loop
## Exited GFM loop
## fchr[A]: 0
## fchr[C]: 38223602
## fchr[G]: 59775041
## fchr[T]: 81303691
## fchr[$]: 119481543
## Exiting GFM::buildToDisk()
## Returning from initFromVector
## Wrote 44026064 bytes to primary GFM file: ./data/tair10.fasta.1.ht2
## Wrote 29870392 bytes to secondary GFM file: ./data/tair10.fasta.2.ht2
## Re-opening _in1 and _in2 as input streams
## Returning from GFM constructor
## Returning from initFromVector
## Wrote 52471155 bytes to primary GFM file: ./data/tair10.fasta.5.ht2
## Wrote 30416490 bytes to secondary GFM file: ./data/tair10.fasta.6.ht2
## Re-opening _in5 and _in5 as input streams
## Returning from HierEbwt constructor
## Headers:
## len: 119481543
## gbwtLen: 119481544
## nodes: 119481544
## sz: 29870386
## gbwtSz: 29870387
## lineRate: 6
## offRate: 4
## offMask: 0xfffffff0
## ftabChars: 10
## eftabLen: 0
## eftabSz: 0
## ftabLen: 1048577
## ftabSz: 4194308
## offsLen: 7467597
## offsSz: 29870388
## lineSz: 64
## sideSz: 64
## sideGbwtSz: 48
## sideGbwtLen: 192
## numSides: 622300
## numLines: 622300
## gbwtTotLen: 39827200
## gbwtTotSz: 39827200
## reverse: 0
## linearFM: Yes
## Total time for call to driver() for forward index: 00:01:50cat(system(paste0('cat results/hisat2-build.out'), intern = T), sep = '\n')## Building DifferenceCoverSample
## Building sPrime
## Building sPrimeOrder
## V-Sorting samples
## V-Sorting samples time: 00:00:03
## Allocating rank array
## Ranking v-sort output
## Ranking v-sort output time: 00:00:01
## Invoking Larsson-Sadakane on ranks
## Invoking Larsson-Sadakane on ranks time: 00:00:01
## Sanity-checking and returning
## Building samples
## Reserving space for 12 sample suffixes
## Generating random suffixes
## QSorting 12 sample offsets, eliminating duplicates
## QSorting sample offsets, eliminating duplicates time: 00:00:00
## Multikey QSorting 12 samples
## (Using difference cover)
## Multikey QSorting samples time: 00:00:00
## Calculating bucket sizes
## Binary sorting into buckets
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Binary sorting into buckets time: 00:00:05
## Splitting and merging
## Splitting and merging time: 00:00:00
## Split 1, merged 6; iterating...
## Binary sorting into buckets
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Binary sorting into buckets time: 00:00:04
## Splitting and merging
## Splitting and merging time: 00:00:00
## Split 1, merged 1; iterating...
## Binary sorting into buckets
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Binary sorting into buckets time: 00:00:04
## Splitting and merging
## Splitting and merging time: 00:00:00
## Avg bucket size: 1.49352e+07 (target: 22402788)
## Getting block 1 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:02
## Sorting block of length 17731233
## (Using difference cover)
## Sorting block time: 00:00:07
## Returning block of 17731234
## Getting block 2 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:01
## Sorting block of length 11741600
## (Using difference cover)
## Sorting block time: 00:00:04
## Returning block of 11741601
## Getting block 3 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:02
## Sorting block of length 18337273
## (Using difference cover)
## Sorting block time: 00:00:06
## Returning block of 18337274
## Getting block 4 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:02
## Sorting block of length 10852725
## (Using difference cover)
## Sorting block time: 00:00:04
## Returning block of 10852726
## Getting block 5 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:02
## Sorting block of length 13449274
## (Using difference cover)
## Sorting block time: 00:00:05
## Returning block of 13449275
## Getting block 6 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:02
## Sorting block of length 21279068
## (Using difference cover)
## Sorting block time: 00:00:08
## Returning block of 21279069
## Getting block 7 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:02
## Sorting block of length 20672363
## (Using difference cover)
## Sorting block time: 00:00:07
## Returning block of 20672364
## Getting block 8 of 8
## Reserving size (22402789) for bucket
## Calculating Z arrays
## Calculating Z arrays time: 00:00:00
## Entering block accumulator loop:
## 10%
## 20%
## 30%
## 40%
## 50%
## 60%
## 70%
## 80%
## 90%
## 100%
## Block accumulator loop time: 00:00:01
## Sorting block of length 5418000
## (Using difference cover)
## Sorting block time: 00:00:02
## Returning block of 5418001resources <- list(walltime="01:00:00", ntasks=1, ncpus=cores(args), memory="10G")
resources## $walltime
## [1] "01:00:00"
##
## $ntasks
## [1] 1
##
## $ncpus
## [1] 4
##
## $memory
## [1] "10G"reg <- clusterRun(args, conffile=".BatchJobs.R", template="slurm.tmpl", Njobs=18, runid="01",
resourceList=resources) # takes about 30 min for alldata## Creating dir: /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/submitargs01_BJdb_7193## Loading required package: BatchJobs## Loading required package: BBmisc##
## Attaching package: 'BBmisc'## The following object is masked from 'package:Biostrings':
##
## collapse## The following object is masked from 'package:IRanges':
##
## collapse## The following object is masked from 'package:BiocGenerics':
##
## normalize## The following object is masked from 'package:base':
##
## isFALSE## The development of BatchJobs and BatchExperiments is discontinued.## Consider switching to 'batchtools' for new features and improved stability## Sourced 2 configuration files:## 1: /bigdata/operations/pkgadmin/opt/linux/centos/7.x/x86_64/pkgs/R/3.5.0/lib64/R/library/BatchJobs/etc/BatchJobs_global_config.R## 2: /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/.BatchJobs.R## BatchJobs configuration:
## cluster functions: SLURM
## mail.from:
## mail.to:
## mail.start: none
## mail.done: none
## mail.error: none
## default.resources:
## debug: FALSE
## raise.warnings: FALSE
## staged.queries: TRUE
## max.concurrent.jobs: Inf
## fs.timeout: NA
## measure.mem: TRUE## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries## Saving registry: /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/submitargs01_BJdb_7193/registry.RData## Adding 18 jobs to DB.## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries## Saving conf: /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/submitargs01_BJdb_7193/conf.RData## Submitting 18 chunks / 18 jobs.## Cluster functions: SLURM.## Auto-mailer settings: start=none, done=none, error=none.## Sending 18 submit messages...
## Might take some time, do not interrupt this!# don't submit for 20 hours on short-list!
# 1 minute
reg## Job registry: systemPipe
## Number of jobs: 18
## Files dir: /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/submitargs01_BJdb_7193
## Work dir: /bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq
## Multiple result files: FALSE
## Seed: 654033616
## Required packages: BatchJobs, systemPipeRwaitForJobs(reg)## Syncing registry ...## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries
## Warning in result_fetch(res@ptr, n = n): Don't need to call dbFetch() for statements, only for
## queries## [1] TRUECheck whether all BAM files have been created
outpaths(args)## M1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446027_1.fastq.gz.hisat.bam"
## M1B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446028_1.fastq.gz.hisat.bam"
## A1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446029_1.fastq.gz.hisat.bam"
## A1B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446030_1.fastq.gz.hisat.bam"
## V1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446031_1.fastq.gz.hisat.bam"
## V1B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446032_1.fastq.gz.hisat.bam"
## M6A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446033_1.fastq.gz.hisat.bam"
## M6B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446034_1.fastq.gz.hisat.bam"
## A6A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446035_1.fastq.gz.hisat.bam"
## A6B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446036_1.fastq.gz.hisat.bam"
## V6A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446037_1.fastq.gz.hisat.bam"
## V6B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446038_1.fastq.gz.hisat.bam"
## M12A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446039_1.fastq.gz.hisat.bam"
## M12B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446040_1.fastq.gz.hisat.bam"
## A12A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446041_1.fastq.gz.hisat.bam"
## A12B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446042_1.fastq.gz.hisat.bam"
## V12A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446043_1.fastq.gz.hisat.bam"
## V12B
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446044_1.fastq.gz.hisat.bam"file.exists(outpaths(args))## [1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE TRUE4.3 Read and alignment stats
The following provides an overview of the number of reads in each sample and how many of them aligned to the reference.
displayKnitStatus()
read_statsDF <- systemPipeR::alignStats(args=args)
read_statsDF## FileName Nreads Nalign Perc_Aligned Nalign_Primary Perc_Aligned_Primary
## M1A M1A 16804839 15230200 90.62985 15230200 90.62985
## M1B M1B 26501201 22334774 84.27835 22334774 84.27835
## A1A A1A 25111748 23842057 94.94384 23842057 94.94384
## A1B A1B 21825000 18773190 86.01691 18773190 86.01691
## V1A V1A 21615691 19770992 91.46593 19770992 91.46593
## V1B V1B 27407590 26294999 95.94057 26294999 95.94057
## M6A M6A 35641168 29538001 82.87607 29538001 82.87607
## M6B M6B 35377173 31996736 90.44458 31996736 90.44458
## A6A A6A 32762724 28756528 87.77209 28756528 87.77209
## A6B A6B 34047095 28282398 83.06846 28282398 83.06846
## V6A V6A 42129667 38486822 91.35325 38486822 91.35325
## V6B V6B 38506053 36117739 93.79756 36117739 93.79756
## M12A M12A 16792086 12662780 75.40921 12662780 75.40921
## M12B M12B 41478748 38375635 92.51879 38375635 92.51879
## A12A A12A 37013155 33670266 90.96838 33670266 90.96838
## A12B A12B 37277181 30957233 83.04607 30957233 83.04607
## V12A V12A 17196483 14359283 83.50128 14359283 83.50128
## V12B V12B 31228111 27671780 88.61176 27671780 88.61176write.table(read_statsDF, "results/alignStats.xls", row.names=FALSE, quote=FALSE, sep="\t")The following shows the alignment statistics for a sample file provided by the systemPipeR package.
read.table(system.file("extdata", "alignStats.xls", package="systemPipeR"), header=TRUE)[1:4,]## FileName Nreads2x Nalign Perc_Aligned Nalign_Primary Perc_Aligned_Primary
## 1 M1A 192918 177961 92.24697 177961 92.24697
## 2 M1B 197484 159378 80.70426 159378 80.70426
## 3 A1A 189870 176055 92.72397 176055 92.72397
## 4 A1B 188854 147768 78.24457 147768 78.244574.4 Create symbolic links for viewing BAM files in IGV
The symLink2bam function creates symbolic links to view the BAM alignment files in a genome browser such as IGV. The corresponding URLs are written to a file with a path specified under urlfile in the results directory.
symLink2bam(sysargs=args, htmldir=c("~/.html/", "somedir/"),
urlbase="http://biocluster.ucr.edu/~tgirke/",
urlfile="./results/IGVurl.txt")5 (5)Read quantification
5.1 Read counting with summarizeOverlaps in parallel mode using multiple cores
Reads overlapping with annotation ranges of interest are counted for each sample using the summarizeOverlaps function (Lawrence et al. 2013). The read counting is preformed for exonic gene regions in a non-strand-specific manner while ignoring overlaps among different genes. Subsequently, the expression count values are normalized by reads per kp per million mapped reads (RPKM). The raw read count table (countDFeByg.xls) and the correspoding RPKM table (rpkmDFeByg.xls) are written to separate files in the directory of this project. Parallelization is achieved with the BiocParallel package, here using 8 CPU cores.
displayKnitStatus()
# uses >3GB memory
library("GenomicFeatures"); library(BiocParallel)## Loading required package: AnnotationDbicat(system(paste0('head data/tair10.gff'), intern = T), sep = '\n')## Chr1 TAIR10 chromosome 1 30427671 . . . ID=Chr1;Name=Chr1
## Chr1 TAIR10 gene 3631 5899 . + . ID=AT1G01010;Note=protein_coding_gene;Name=AT1G01010
## Chr1 TAIR10 mRNA 3631 5899 . + . ID=AT1G01010.1;Parent=AT1G01010;Name=AT1G01010.1;Index=1
## Chr1 TAIR10 protein 3760 5630 . + . ID=AT1G01010.1-Protein;Name=AT1G01010.1;Derives_from=AT1G01010.1
## Chr1 TAIR10 exon 3631 3913 . + . Parent=AT1G01010.1
## Chr1 TAIR10 five_prime_UTR 3631 3759 . + . Parent=AT1G01010.1
## Chr1 TAIR10 CDS 3760 3913 . + 0 Parent=AT1G01010.1,AT1G01010.1-Protein;
## Chr1 TAIR10 exon 3996 4276 . + . Parent=AT1G01010.1
## Chr1 TAIR10 CDS 3996 4276 . + 2 Parent=AT1G01010.1,AT1G01010.1-Protein;
## Chr1 TAIR10 exon 4486 4605 . + . Parent=AT1G01010.1cat(system(paste0('tail data/tair10.gff'), intern = T), sep = '\n')## ChrM TAIR10 gene 363725 364042 . + . ID=ATMG01400;Note=protein_coding_gene;Name=ATMG01400
## ChrM TAIR10 mRNA 363725 364042 . + . ID=ATMG01400.1;Parent=ATMG01400;Name=ATMG01400.1;Index=1
## ChrM TAIR10 protein 363725 364042 . + . ID=ATMG01400.1-Protein;Name=ATMG01400.1;Derives_from=ATMG01400.1
## ChrM TAIR10 exon 363725 364042 . + . Parent=ATMG01400.1
## ChrM TAIR10 CDS 363725 364042 . + 0 Parent=ATMG01400.1,ATMG01400.1-Protein;
## ChrM TAIR10 gene 366086 366700 . - . ID=ATMG01410;Note=protein_coding_gene;Name=ATMG01410
## ChrM TAIR10 mRNA 366086 366700 . - . ID=ATMG01410.1;Parent=ATMG01410;Name=ATMG01410.1;Index=1
## ChrM TAIR10 protein 366086 366700 . - . ID=ATMG01410.1-Protein;Name=ATMG01410.1;Derives_from=ATMG01410.1
## ChrM TAIR10 CDS 366086 366700 . - 0 Parent=ATMG01410.1,ATMG01410.1-Protein;
## ChrM TAIR10 exon 366086 366700 . - . Parent=ATMG01410.1txdb <- GenomicFeatures::makeTxDbFromGFF(file="data/tair10.gff", format="gff", dataSource="TAIR", organism="Arabidopsis thaliana")## Import genomic features from the file as a GRanges object ...## OK## Prepare the 'metadata' data frame ... OK
## Make the TxDb object ...## Warning in .extract_exons_from_GRanges(exon_IDX, gr, ID, Name, Parent, feature = "exon", : The following orphan exon were dropped (showing only the 6 first):
## seqid start end strand ID Parent Name
## 1 Chr1 433031 433819 - <NA> AT1G02228.1 <NA>
## 2 Chr1 846664 847739 + <NA> AT1G03420.1 <NA>
## 3 Chr1 2070737 2070893 + <NA> AT1G06740.1 <NA>
## 4 Chr1 2071102 2073535 + <NA> AT1G06740.1 <NA>
## 5 Chr1 2415041 2415970 + <NA> AT1G07800.1 <NA>
## 6 Chr1 2531695 2534786 - <NA> AT1G08105.1 <NA>## Warning in .extract_exons_from_GRanges(cds_IDX, gr, ID, Name, Parent, feature = "cds", : The following orphan CDS were dropped (showing only the 6 first):
## seqid start end strand ID Parent Name
## 1 Chr1 3760 3913 + <NA> AT1G01010.1-Protein <NA>
## 2 Chr1 3996 4276 + <NA> AT1G01010.1-Protein <NA>
## 3 Chr1 4486 4605 + <NA> AT1G01010.1-Protein <NA>
## 4 Chr1 4706 5095 + <NA> AT1G01010.1-Protein <NA>
## 5 Chr1 5174 5326 + <NA> AT1G01010.1-Protein <NA>
## 6 Chr1 5439 5630 + <NA> AT1G01010.1-Protein <NA>## OKtxdb## TxDb object:
## # Db type: TxDb
## # Supporting package: GenomicFeatures
## # Data source: TAIR
## # Organism: Arabidopsis thaliana
## # Taxonomy ID: 3702
## # miRBase build ID: NA
## # Genome: NA
## # transcript_nrow: 37760
## # exon_nrow: 163022
## # cds_nrow: 147494
## # Db created by: GenomicFeatures package from Bioconductor
## # Creation time: 2019-03-05 00:16:59 -0800 (Tue, 05 Mar 2019)
## # GenomicFeatures version at creation time: 1.32.3
## # RSQLite version at creation time: 2.1.1
## # DBSCHEMAVERSION: 1.2saveDb(txdb, file="./data/tair10.sqlite")## TxDb object:
## # Db type: TxDb
## # Supporting package: GenomicFeatures
## # Data source: TAIR
## # Organism: Arabidopsis thaliana
## # Taxonomy ID: 3702
## # miRBase build ID: NA
## # Genome: NA
## # transcript_nrow: 37760
## # exon_nrow: 163022
## # cds_nrow: 147494
## # Db created by: GenomicFeatures package from Bioconductor
## # Creation time: 2019-03-05 00:16:59 -0800 (Tue, 05 Mar 2019)
## # GenomicFeatures version at creation time: 1.32.3
## # RSQLite version at creation time: 2.1.1
## # DBSCHEMAVERSION: 1.2txdb <- loadDb("./data/tair10.sqlite")
outpaths(args)[1]## M1A
## "/bigdata/girkelab/gdmosher/code/systemPipeRstudy/rnaseq/results/SRR446027_1.fastq.gz.hisat.bam"(align <- GenomicAlignments::readGAlignments(outpaths(args)[1])) # Demonstrates how to read bam file into R## GAlignments object with 15230200 alignments and 0 metadata columns:
## seqnames strand cigar qwidth start end width njunc
## <Rle> <Rle> <character> <integer> <integer> <integer> <integer> <integer>
## [1] Chr1 - 12S63M 75 3645 3707 63 0
## [2] Chr1 + 75M 75 3647 3721 75 0
## [3] Chr1 + 75M 75 3648 3722 75 0
## [4] Chr1 + 75M 75 3650 3724 75 0
## [5] Chr1 + 75M 75 3653 3727 75 0
## ... ... ... ... ... ... ... ... ...
## [15230196] ChrC - 75M 75 153771 153845 75 0
## [15230197] ChrC + 75M 75 154036 154110 75 0
## [15230198] ChrC + 75M 75 154283 154357 75 0
## [15230199] ChrC + 75M 75 154307 154381 75 0
## [15230200] ChrC + 75M 75 154323 154397 75 0
## -------
## seqinfo: 7 sequences from an unspecified genomealign## GAlignments object with 15230200 alignments and 0 metadata columns:
## seqnames strand cigar qwidth start end width njunc
## <Rle> <Rle> <character> <integer> <integer> <integer> <integer> <integer>
## [1] Chr1 - 12S63M 75 3645 3707 63 0
## [2] Chr1 + 75M 75 3647 3721 75 0
## [3] Chr1 + 75M 75 3648 3722 75 0
## [4] Chr1 + 75M 75 3650 3724 75 0
## [5] Chr1 + 75M 75 3653 3727 75 0
## ... ... ... ... ... ... ... ... ...
## [15230196] ChrC - 75M 75 153771 153845 75 0
## [15230197] ChrC + 75M 75 154036 154110 75 0
## [15230198] ChrC + 75M 75 154283 154357 75 0
## [15230199] ChrC + 75M 75 154307 154381 75 0
## [15230200] ChrC + 75M 75 154323 154397 75 0
## -------
## seqinfo: 7 sequences from an unspecified genomeeByg <- GenomicFeatures::exonsBy(txdb, by=c("gene"))
eByg## GRangesList object of length 29699:
## $AT1G01010
## GRanges object with 6 ranges and 2 metadata columns:
## seqnames ranges strand | exon_id exon_name
## <Rle> <IRanges> <Rle> | <integer> <character>
## [1] Chr1 3631-3913 + | 1 <NA>
## [2] Chr1 3996-4276 + | 2 <NA>
## [3] Chr1 4486-4605 + | 3 <NA>
## [4] Chr1 4706-5095 + | 4 <NA>
## [5] Chr1 5174-5326 + | 5 <NA>
## [6] Chr1 5439-5899 + | 6 <NA>
##
## $AT1G01020
## GRanges object with 12 ranges and 2 metadata columns:
## seqnames ranges strand | exon_id exon_name
## [1] Chr1 5928-6263 - | 21367 <NA>
## [2] Chr1 6437-7069 - | 21368 <NA>
## [3] Chr1 6790-7069 - | 21369 <NA>
## [4] Chr1 7157-7232 - | 21370 <NA>
## [5] Chr1 7157-7450 - | 21371 <NA>
## ... ... ... ... . ... ...
## [8] Chr1 7762-7835 - | 21374 <NA>
## [9] Chr1 7942-7987 - | 21375 <NA>
## [10] Chr1 8236-8325 - | 21376 <NA>
## [11] Chr1 8417-8464 - | 21377 <NA>
## [12] Chr1 8571-8737 - | 21378 <NA>
##
## $AT1G01030
## GRanges object with 2 ranges and 2 metadata columns:
## seqnames ranges strand | exon_id exon_name
## [1] Chr1 11649-13173 - | 21379 <NA>
## [2] Chr1 13335-13714 - | 21380 <NA>
##
## ...
## <29696 more elements>
## -------
## seqinfo: 7 sequences (2 circular) from an unspecified genome; no seqlengthsbfl <- Rsamtools::BamFileList(outpaths(args), yieldSize=50000, index=character())
bfl## BamFileList of length 18
## names(18): M1A M1B A1A A1B V1A V1B M6A M6B A6A A6B V6A V6B M12A M12B A12A A12B V12A V12BmulticoreParam <- MulticoreParam(workers=2); register(multicoreParam); registered()## $MulticoreParam
## class: MulticoreParam
## bpisup: FALSE; bpnworkers: 2; bptasks: 0; bpjobname: BPJOB
## bplog: FALSE; bpthreshold: INFO; bpstopOnError: TRUE
## bptimeout: 2592000; bpprogressbar: FALSE
## bpRNGseed:
## bplogdir: NA
## bpresultdir: NA
## cluster type: FORK
##
## $SnowParam
## class: SnowParam
## bpisup: FALSE; bpnworkers: 62; bptasks: 0; bpjobname: BPJOB
## bplog: FALSE; bpthreshold: INFO; bpstopOnError: TRUE
## bptimeout: 2592000; bpprogressbar: FALSE
## bpRNGseed:
## bplogdir: NA
## bpresultdir: NA
## cluster type: SOCK
##
## $SerialParam
## class: SerialParam
## bpisup: TRUE; bpnworkers: 1; bptasks: 0; bpjobname: BPJOB
## bplog: FALSE; bpthreshold: INFO; bpstopOnError: TRUE
## bptimeout: 2592000; bpprogressbar: FALSE
## bplogdir: NAmulticoreParam## class: MulticoreParam
## bpisup: FALSE; bpnworkers: 2; bptasks: 0; bpjobname: BPJOB
## bplog: FALSE; bpthreshold: INFO; bpstopOnError: TRUE
## bptimeout: 2592000; bpprogressbar: FALSE
## bpRNGseed:
## bplogdir: NA
## bpresultdir: NA
## cluster type: FORK#knitr::knit_exit(){r read_counting2, eval=FALSEdoallchunks} # was TRUE until 2019-0304 displayKnitStatus() # takes about 30 min for alldata counteByg <- bplapply(bfl, function(x) GenomicAlignments::summarizeOverlaps(eByg, x, mode="Union", ignore.strand=TRUE, inter.feature=FALSE, singleEnd=TRUE)) displayKnitStatus() str(counteByg) counteByg countDFeByg <- sapply(seq(along=counteByg), function(x) SummarizedExperiment::assays(counteByg[[x]])$counts) str(countDFeByg) countDFeByg displayKnitStatus() rownames(countDFeByg) <- names(rowRanges(counteByg[[1]])); colnames(countDFeByg) <- names(bfl) rownames(countDFeByg) rpkmDFeByg <- apply(countDFeByg, 2, function(x) returnRPKM(counts=x, ranges=eByg)) str(rpkmDFeByg) rpkmDFeByg write.table(countDFeByg, "results/countDFeByg.xls", col.names=NA, quote=FALSE, sep="\t") write.table(rpkmDFeByg, "results/rpkmDFeByg.xls", col.names=NA, quote=FALSE, sep="\t")
Sample of data slice of count table {r view_counts, eval=T} # always T read.delim("results/countDFeByg.xls", row.names=1, check.names=FALSE)[1:4,1:5]
Sample of data slice of RPKM table
{r view_rpkm, eval=T} # always T read.delim("results/rpkmDFeByg.xls", row.names=1, check.names=FALSE)[1:4,1:4]
Note, for most statistical differential expression or abundance analysis methods, such as edgeR or DESeq2, the raw count values should be used as input. The usage of RPKM values should be restricted to specialty applications required by some users, e.g. manually comparing the expression levels among different genes or features.
5.2 Sample-wise correlation analysis
The following computes the sample-wise Spearman correlation coefficients from the rlog transformed expression values generated with the DESeq2 package. After transformation to a distance matrix, hierarchical clustering is performed with the hclust function and the result is plotted as a dendrogram (also see file sample_tree.pdf).
library(DESeq2, quietly=TRUE); library(ape, warn.conflicts=FALSE)##
## Attaching package: 'DESeq2'## The following object is masked from 'package:systemPipeR':
##
## resultscountDF <- as.matrix(read.table("./results/countDFeByg.xls"))
str(countDF)## int [1:29699, 1:18] 408 163 189 1384 23 291 144 5 0 572 ...
## - attr(*, "dimnames")=List of 2
## ..$ : chr [1:29699] "AT1G01010" "AT1G01020" "AT1G01030" "AT1G01040" ...
## ..$ : chr [1:18] "M1A" "M1B" "A1A" "A1B" ...countDF # exactly the same as countDFeByg above## M1A M1B A1A A1B V1A V1B M6A M6B A6A A6B V6A V6B
## AT1G01010 408 609 631 371 935 523 643 348 1236 877 2205 1381
## AT1G01020 163 333 235 265 272 261 373 291 309 296 548 553
## AT1G01030 189 231 294 124 250 340 190 76 68 208 312 570
## AT1G01040 1384 1866 1758 1411 1721 1582 2145 1421 2133 1813 4465 3925
## AT1G01046 23 18 29 5 29 22 42 21 47 29 60 62
## AT1G01050 291 388 446 355 394 662 1298 1422 940 1209 1722 2483
## AT1G01060 144 742 152 154 56 52 15 10 11 5 3 17
## AT1G01070 5 2 7 8 16 6 28 32 68 25 76 47
## AT1G01073 0 0 0 0 0 0 0 0 0 0 0 0
## AT1G01080 572 1079 659 942 813 1148 1183 1769 660 967 1065 1929
## AT1G01090 1815 3215 2362 2777 2006 4109 4398 4649 2670 3542 4193 6173
## AT1G01100 1383 1497 1739 1176 1272 2090 5540 5203 6320 4230 8018 7433
## AT1G01110 16 23 36 23 14 55 13 29 37 31 50 87
## AT1G01115 0 0 0 0 0 0 0 0 0 0 0 0
## AT1G01120 4267 6903 5669 4517 4467 6728 3207 1773 982 968 2919 2512
## AT1G01130 25 32 30 38 16 26 12 17 21 8 32 17
## AT1G01140 2601 5992 4407 3267 3555 4765 3355 4941 1705 3142 5711 6677
## AT1G01150 0 0 0 0 0 0 0 0 0 0 1 0
## AT1G01160 318 501 516 339 517 413 1380 1182 1308 1020 2005 1875
## AT1G01170 419 330 480 199 619 695 1177 1122 779 836 1046 1498
## AT1G01180 110 84 202 86 214 209 467 442 509 418 588 456
## AT1G01183 0 0 0 0 0 0 0 0 0 1 0 0
## AT1G01190 62 75 19 46 13 49 66 150 25 76 47 60
## AT1G01200 12 26 12 43 3 17 13 25 16 18 31 30
## AT1G01210 74 131 135 88 122 83 323 244 386 290 519 572
## AT1G01220 242 353 351 276 356 371 758 901 599 633 992 962
## AT1G01225 17 13 20 17 27 31 27 44 25 14 27 30
## AT1G01230 584 814 1118 671 1037 1159 739 791 811 703 1058 979
## AT1G01240 533 347 703 418 811 441 700 556 504 559 1011 785
## AT1G01250 19 22 35 29 30 19 48 91 103 20 116 43
## AT1G01260 412 939 665 787 569 1140 279 340 480 471 716 923
## AT1G01270 0 0 0 0 0 0 0 0 0 0 0 0
## AT1G01280 0 0 0 0 0 3 0 0 0 0 0 0
## AT1G01290 105 201 173 221 153 232 258 288 303 251 363 452
## AT1G01300 908 3235 2319 2904 1522 3673 1154 1461 1086 1081 2464 2653
## AT1G01305 0 0 0 0 0 0 0 0 0 0 0 0
## AT1G01310 3 2 2 5 1 1 2 4 3 10 3 8
## AT1G01320 1266 3670 1182 2510 1440 1886 13371 13333 5693 8850 17263 21114
## AT1G01340 220 334 699 396 635 680 470 432 2924 1388 2058 588
## AT1G01350 302 597 616 493 487 655 512 455 505 532 771 684
## AT1G01355 5 4 5 0 6 8 10 1 9 2 12 18
## AT1G01360 168 422 319 230 371 208 515 481 601 345 819 615
## AT1G01370 10 6 12 14 15 23 11 24 41 40 33 22
## AT1G01380 1 3 3 3 0 1 8 4 19 3 14 13
## AT1G01390 27 111 41 117 22 32 96 106 25 21 30 26
## AT1G01400 0 0 0 0 0 0 0 0 0 0 0 0
## AT1G01410 0 0 0 0 0 0 0 0 0 0 0 0
## AT1G01420 160 428 199 243 139 199 384 280 293 192 529 303
## AT1G01430 331 703 427 504 469 660 1237 1605 430 691 1217 1534
## AT1G01440 216 231 304 199 266 337 487 570 896 482 875 479
## AT1G01448 59 101 112 117 160 211 359 272 360 314 536 622
## AT1G01450 27 59 60 61 67 108 138 134 144 140 275 306
## AT1G01453 1 5 1 0 1 2 0 0 6 1 3 2
## AT1G01460 0 5 2 0 0 2 0 0 0 0 0 2
## AT1G01470 15799 19149 29036 13666 27581 27510 5890 9290 4951 5290 11713 8708
## M12A M12B A12A A12B V12A V12B
## AT1G01010 365 582 1289 1447 1028 1607
## AT1G01020 99 367 324 331 145 373
## AT1G01030 77 147 105 173 295 1110
## AT1G01040 994 2786 3440 2318 1104 2437
## AT1G01046 22 38 72 26 26 55
## AT1G01050 1033 3476 1862 1813 1008 2428
## AT1G01060 328 804 1254 667 262 408
## AT1G01070 16 128 165 151 37 50
## AT1G01073 0 0 0 0 0 0
## AT1G01080 632 2734 933 1047 416 986
## AT1G01090 2070 6748 2892 3382 1919 3660
## AT1G01100 2310 6602 7034 3134 2783 5512
## AT1G01110 22 114 34 55 21 100
## AT1G01115 0 0 0 0 0 0
## AT1G01120 986 2257 1257 721 1335 1827
## AT1G01130 1 32 29 11 6 15
## AT1G01140 1476 5180 3813 3807 1345 2927
## AT1G01150 0 3 1 3 0 0
## AT1G01160 760 2147 2007 1466 673 1281
## AT1G01170 523 2495 1314 1271 487 1399
## AT1G01180 272 697 577 690 365 347
## AT1G01183 0 0 0 0 0 0
## AT1G01190 22 202 21 48 13 31
## AT1G01200 12 36 23 6 11 26
## AT1G01210 81 403 306 291 93 475
## AT1G01220 453 987 741 542 330 436
## AT1G01225 10 29 18 14 12 8
## AT1G01230 338 857 847 591 364 509
## AT1G01240 305 717 977 1046 226 464
## AT1G01250 70 128 333 35 105 86
## AT1G01260 177 570 528 654 233 617
## AT1G01270 0 0 0 0 0 0
## AT1G01280 0 0 0 0 0 0
## AT1G01290 145 459 398 284 118 242
## AT1G01300 1083 1076 1062 708 975 1727
## AT1G01305 0 0 0 0 0 0
## AT1G01310 0 8 6 7 3 4
## AT1G01320 9286 23087 17633 14018 6759 10738
## AT1G01340 367 372 3489 2712 959 844
## AT1G01350 150 645 611 614 203 597
## AT1G01355 8 17 22 6 4 4
## AT1G01360 277 1030 1034 626 214 501
## AT1G01370 5 22 79 48 10 12
## AT1G01380 0 12 14 3 3 12
## AT1G01390 48 165 82 54 41 40
## AT1G01400 0 0 0 0 0 0
## AT1G01410 0 0 0 0 0 0
## AT1G01420 246 497 537 304 227 257
## AT1G01430 786 2145 634 653 436 496
## AT1G01440 281 762 1008 795 417 440
## AT1G01448 209 958 436 458 210 320
## AT1G01450 106 491 200 269 102 165
## AT1G01453 1 0 17 1 2 0
## AT1G01460 0 0 0 1 0 1
## AT1G01470 1506 3305 4254 3071 3993 12291
## [ reached getOption("max.print") -- omitted 29644 rows ]countDF[1:6,1:18]## M1A M1B A1A A1B V1A V1B M6A M6B A6A A6B V6A V6B M12A M12B A12A A12B V12A V12B
## AT1G01010 408 609 631 371 935 523 643 348 1236 877 2205 1381 365 582 1289 1447 1028 1607
## AT1G01020 163 333 235 265 272 261 373 291 309 296 548 553 99 367 324 331 145 373
## AT1G01030 189 231 294 124 250 340 190 76 68 208 312 570 77 147 105 173 295 1110
## AT1G01040 1384 1866 1758 1411 1721 1582 2145 1421 2133 1813 4465 3925 994 2786 3440 2318 1104 2437
## AT1G01046 23 18 29 5 29 22 42 21 47 29 60 62 22 38 72 26 26 55
## AT1G01050 291 388 446 355 394 662 1298 1422 940 1209 1722 2483 1033 3476 1862 1813 1008 2428head(countDF)## M1A M1B A1A A1B V1A V1B M6A M6B A6A A6B V6A V6B M12A M12B A12A A12B V12A V12B
## AT1G01010 408 609 631 371 935 523 643 348 1236 877 2205 1381 365 582 1289 1447 1028 1607
## AT1G01020 163 333 235 265 272 261 373 291 309 296 548 553 99 367 324 331 145 373
## AT1G01030 189 231 294 124 250 340 190 76 68 208 312 570 77 147 105 173 295 1110
## AT1G01040 1384 1866 1758 1411 1721 1582 2145 1421 2133 1813 4465 3925 994 2786 3440 2318 1104 2437
## AT1G01046 23 18 29 5 29 22 42 21 47 29 60 62 22 38 72 26 26 55
## AT1G01050 291 388 446 355 394 662 1298 1422 940 1209 1722 2483 1033 3476 1862 1813 1008 2428showClass("SYSargs")## Class "SYSargs" [package "systemPipeR"]
##
## Slots:
##
## Name: targetsin targetsout targetsheader modules software cores
## Class: data.frame data.frame character character character numeric
##
## Name: other reference results infile1 infile2 outfile1
## Class: character character character character character character
##
## Name: sysargs outpaths
## Class: character charactersystemPipeR::targetsin(args)$SampleName## [1] M1A M1B A1A A1B V1A V1B M6A M6B A6A A6B V6A V6B M12A M12B A12A A12B V12A V12B
## Levels: A12A A12B A1A A1B A6A A6B M12A M12B M1A M1B M6A M6B V12A V12B V1A V1B V6A V6Btargetsin(args)$Factor## [1] M1 M1 A1 A1 V1 V1 M6 M6 A6 A6 V6 V6 M12 M12 A12 A12 V12 V12
## Levels: A1 A12 A6 M1 M12 M6 V1 V12 V6colData <- data.frame(row.names=targetsin(args)$SampleName, condition=targetsin(args)$Factor)
colData## condition
## M1A M1
## M1B M1
## A1A A1
## A1B A1
## V1A V1
## V1B V1
## M6A M6
## M6B M6
## A6A A6
## A6B A6
## V6A V6
## V6B V6
## M12A M12
## M12B M12
## A12A A12
## A12B A12
## V12A V12
## V12B V12dds <- DESeq2::DESeqDataSetFromMatrix(countData = countDF, colData = colData, design = ~ condition)
dds## class: DESeqDataSet
## dim: 29699 18
## metadata(1): version
## assays(1): counts
## rownames(29699): AT1G01010 AT1G01020 ... ATMG01400 ATMG01410
## rowData names(0):
## colnames(18): M1A M1B ... V12A V12B
## colData names(1): conditiond <- stats::cor(SummarizedExperiment::assay(DESeq2::rlog(dds)), method="spearman")
d## M1A M1B A1A A1B V1A V1B M6A M6B A6A
## M1A 1.0000000 0.9944677 0.9968751 0.9925802 0.9954879 0.9943393 0.9880320 0.9883368 0.9823649
## M1B 0.9944677 1.0000000 0.9933141 0.9966724 0.9927792 0.9928392 0.9840803 0.9860381 0.9797374
## A1A 0.9968751 0.9933141 1.0000000 0.9927994 0.9974562 0.9954403 0.9854112 0.9858012 0.9838425
## A1B 0.9925802 0.9966724 0.9927994 1.0000000 0.9931923 0.9933901 0.9841116 0.9869330 0.9819459
## V1A 0.9954879 0.9927792 0.9974562 0.9931923 1.0000000 0.9952934 0.9854905 0.9863596 0.9831903
## V1B 0.9943393 0.9928392 0.9954403 0.9933901 0.9952934 1.0000000 0.9836741 0.9852956 0.9810943
## M6A 0.9880320 0.9840803 0.9854112 0.9841116 0.9854905 0.9836741 1.0000000 0.9967254 0.9904169
## M6B 0.9883368 0.9860381 0.9858012 0.9869330 0.9863596 0.9852956 0.9967254 1.0000000 0.9890102
## A6A 0.9823649 0.9797374 0.9838425 0.9819459 0.9831903 0.9810943 0.9904169 0.9890102 1.0000000
## A6B 0.9868785 0.9844799 0.9862008 0.9864027 0.9868605 0.9857454 0.9947531 0.9950620 0.9950594
## V6A 0.9859721 0.9834497 0.9863807 0.9847424 0.9860366 0.9838573 0.9945816 0.9926379 0.9964082
## V6B 0.9859342 0.9841289 0.9839949 0.9841059 0.9847769 0.9831987 0.9957342 0.9946693 0.9889455
## M12A 0.9834261 0.9816501 0.9811381 0.9817027 0.9807686 0.9812911 0.9941149 0.9922778 0.9902384
## M12B 0.9829830 0.9803510 0.9788754 0.9799548 0.9794480 0.9793303 0.9947599 0.9934401 0.9846624
## A12A 0.9814329 0.9784049 0.9810786 0.9793789 0.9803676 0.9784945 0.9904985 0.9882111 0.9954449
## A12B 0.9825677 0.9803498 0.9813207 0.9816537 0.9823017 0.9807573 0.9902858 0.9899702 0.9919886
## V12A 0.9844633 0.9823954 0.9834204 0.9824447 0.9829268 0.9822580 0.9918371 0.9901456 0.9931087
## V12B 0.9839019 0.9812687 0.9816512 0.9806642 0.9817820 0.9796547 0.9912961 0.9895803 0.9877990
## A6B V6A V6B M12A M12B A12A A12B V12A V12B
## M1A 0.9868785 0.9859721 0.9859342 0.9834261 0.9829830 0.9814329 0.9825677 0.9844633 0.9839019
## M1B 0.9844799 0.9834497 0.9841289 0.9816501 0.9803510 0.9784049 0.9803498 0.9823954 0.9812687
## A1A 0.9862008 0.9863807 0.9839949 0.9811381 0.9788754 0.9810786 0.9813207 0.9834204 0.9816512
## A1B 0.9864027 0.9847424 0.9841059 0.9817027 0.9799548 0.9793789 0.9816537 0.9824447 0.9806642
## V1A 0.9868605 0.9860366 0.9847769 0.9807686 0.9794480 0.9803676 0.9823017 0.9829268 0.9817820
## V1B 0.9857454 0.9838573 0.9831987 0.9812911 0.9793303 0.9784945 0.9807573 0.9822580 0.9796547
## M6A 0.9947531 0.9945816 0.9957342 0.9941149 0.9947599 0.9904985 0.9902858 0.9918371 0.9912961
## M6B 0.9950620 0.9926379 0.9946693 0.9922778 0.9934401 0.9882111 0.9899702 0.9901456 0.9895803
## A6A 0.9950594 0.9964082 0.9889455 0.9902384 0.9846624 0.9954449 0.9919886 0.9931087 0.9877990
## A6B 1.0000000 0.9965674 0.9951192 0.9925138 0.9916105 0.9929950 0.9954056 0.9937431 0.9923309
## V6A 0.9965674 1.0000000 0.9948829 0.9936435 0.9901958 0.9952397 0.9937098 0.9952530 0.9924744
## V6B 0.9951192 0.9948829 1.0000000 0.9934253 0.9951448 0.9898375 0.9927653 0.9932089 0.9953356
## M12A 0.9925138 0.9936435 0.9934253 1.0000000 0.9948128 0.9935184 0.9919088 0.9954861 0.9914423
## M12B 0.9916105 0.9901958 0.9951448 0.9948128 1.0000000 0.9890250 0.9914882 0.9907286 0.9924152
## A12A 0.9929950 0.9952397 0.9898375 0.9935184 0.9890250 1.0000000 0.9949628 0.9954713 0.9913995
## A12B 0.9954056 0.9937098 0.9927653 0.9919088 0.9914882 0.9949628 1.0000000 0.9948148 0.9941524
## V12A 0.9937431 0.9952530 0.9932089 0.9954861 0.9907286 0.9954713 0.9948148 1.0000000 0.9953072
## V12B 0.9923309 0.9924744 0.9953356 0.9914423 0.9924152 0.9913995 0.9941524 0.9953072 1.0000000hc <- stats::hclust(dist(1-d))
hc##
## Call:
## stats::hclust(d = dist(1 - d))
##
## Cluster method : complete
## Distance : euclidean
## Number of objects: 18grDevices::pdf("results/sample_tree.pdf")
ape::plot.phylo(ape::as.phylo(hc), type="p", edge.col="blue", edge.width=2, show.node.label=TRUE, no.margin=TRUE)
grDevices::dev.off()## png
## 2
Figure 2: Correlation dendrogram of samples
6 (6)Analysis of DEGs
The analysis of differentially expressed genes (DEGs) is performed with the glm method of the edgeR package (Robinson, McCarthy, and Smyth 2010). The sample comparisons used by this analysis are defined in the header lines of the targets.txt file starting with <CMP>.
6.1 Run edgeR
library(edgeR)## Loading required package: limma##
## Attaching package: 'limma'## The following object is masked from 'package:DESeq2':
##
## plotMA## The following object is masked from 'package:BBmisc':
##
## printHead## The following object is masked from 'package:BiocGenerics':
##
## plotMAcountDF <- read.delim("results/countDFeByg.xls", row.names=1, check.names=FALSE)
head(countDF) # best way to see counts!## M1A M1B A1A A1B V1A V1B M6A M6B A6A A6B V6A V6B M12A M12B A12A A12B V12A V12B
## AT1G01010 408 609 631 371 935 523 643 348 1236 877 2205 1381 365 582 1289 1447 1028 1607
## AT1G01020 163 333 235 265 272 261 373 291 309 296 548 553 99 367 324 331 145 373
## AT1G01030 189 231 294 124 250 340 190 76 68 208 312 570 77 147 105 173 295 1110
## AT1G01040 1384 1866 1758 1411 1721 1582 2145 1421 2133 1813 4465 3925 994 2786 3440 2318 1104 2437
## AT1G01046 23 18 29 5 29 22 42 21 47 29 60 62 22 38 72 26 26 55
## AT1G01050 291 388 446 355 394 662 1298 1422 940 1209 1722 2483 1033 3476 1862 1813 1008 2428targets <- utils::read.delim("targets.txt", comment="#")
targets## FileName SampleName Factor SampleLong Experiment Date
## 1 ./data/SRR446027_1.fastq.gz M1A M1 Mock.1h.A 1 23-Mar-2012
## 2 ./data/SRR446028_1.fastq.gz M1B M1 Mock.1h.B 1 23-Mar-2012
## 3 ./data/SRR446029_1.fastq.gz A1A A1 Avr.1h.A 1 23-Mar-2012
## 4 ./data/SRR446030_1.fastq.gz A1B A1 Avr.1h.B 1 23-Mar-2012
## 5 ./data/SRR446031_1.fastq.gz V1A V1 Vir.1h.A 1 23-Mar-2012
## 6 ./data/SRR446032_1.fastq.gz V1B V1 Vir.1h.B 1 23-Mar-2012
## 7 ./data/SRR446033_1.fastq.gz M6A M6 Mock.6h.A 1 23-Mar-2012
## 8 ./data/SRR446034_1.fastq.gz M6B M6 Mock.6h.B 1 23-Mar-2012
## 9 ./data/SRR446035_1.fastq.gz A6A A6 Avr.6h.A 1 23-Mar-2012
## 10 ./data/SRR446036_1.fastq.gz A6B A6 Avr.6h.B 1 23-Mar-2012
## 11 ./data/SRR446037_1.fastq.gz V6A V6 Vir.6h.A 1 23-Mar-2012
## 12 ./data/SRR446038_1.fastq.gz V6B V6 Vir.6h.B 1 23-Mar-2012
## 13 ./data/SRR446039_1.fastq.gz M12A M12 Mock.12h.A 1 23-Mar-2012
## 14 ./data/SRR446040_1.fastq.gz M12B M12 Mock.12h.B 1 23-Mar-2012
## 15 ./data/SRR446041_1.fastq.gz A12A A12 Avr.12h.A 1 23-Mar-2012
## 16 ./data/SRR446042_1.fastq.gz A12B A12 Avr.12h.B 1 23-Mar-2012
## 17 ./data/SRR446043_1.fastq.gz V12A V12 Vir.12h.A 1 23-Mar-2012
## 18 ./data/SRR446044_1.fastq.gz V12B V12 Vir.12h.B 1 23-Mar-2012cmp <- systemPipeR::readComp(file="targets.txt", format="matrix", delim="-")
cmp## $CMPset1
## [,1] [,2]
## [1,] "M1" "A1"
## [2,] "M1" "V1"
## [3,] "A1" "V1"
## [4,] "M6" "A6"
## [5,] "M6" "V6"
## [6,] "A6" "V6"
## [7,] "M12" "A12"
## [8,] "M12" "V12"
## [9,] "A12" "V12"
##
## $CMPset2
## [,1] [,2]
## [1,] "M1" "A1"
## [2,] "M1" "V1"
## [3,] "M1" "M6"
## [4,] "M1" "A6"
## [5,] "M1" "V6"
## [6,] "M1" "M12"
## [7,] "M1" "A12"
## [8,] "M1" "V12"
## [9,] "A1" "V1"
## [10,] "A1" "M6"
## [11,] "A1" "A6"
## [12,] "A1" "V6"
## [13,] "A1" "M12"
## [14,] "A1" "A12"
## [15,] "A1" "V12"
## [16,] "V1" "M6"
## [17,] "V1" "A6"
## [18,] "V1" "V6"
## [19,] "V1" "M12"
## [20,] "V1" "A12"
## [21,] "V1" "V12"
## [22,] "M6" "A6"
## [23,] "M6" "V6"
## [24,] "M6" "M12"
## [25,] "M6" "A12"
## [26,] "M6" "V12"
## [27,] "A6" "V6"
## [28,] "A6" "M12"
## [29,] "A6" "A12"
## [30,] "A6" "V12"
## [31,] "V6" "M12"
## [32,] "V6" "A12"
## [33,] "V6" "V12"
## [34,] "M12" "A12"
## [35,] "M12" "V12"
## [36,] "A12" "V12"debug(run_edgeR)
edgeDF <- systemPipeR::run_edgeR(countDF=countDF, targets=targets, cmp=cmp[[1]], independent=FALSE, mdsplot="")## debugging in: systemPipeR::run_edgeR(countDF = countDF, targets = targets,
## cmp = cmp[[1]], independent = FALSE, mdsplot = "")
## debug: {
## if (class(cmp) != "matrix" & length(cmp) == 2)
## cmp <- t(as.matrix(cmp))
## samples <- as.character(targets$Factor)
## names(samples) <- paste(as.character(targets$SampleName),
## "", sep = "")
## countDF <- countDF[, names(samples)]
## countDF[is.na(countDF)] <- 0
## edgeDF <- data.frame(row.names = rownames(countDF))
## group <- as.character(samples)
## if (independent == TRUE) {
## loopv <- seq(along = cmp[, 1])
## }
## else {
## loopv <- 1
## }
## for (j in loopv) {
## y <- DGEList(counts = countDF, group = group)
## if (independent == TRUE) {
## subset <- samples[samples %in% cmp[j, ]]
## y <- y[, names(subset)]
## y$samples$group <- factor(as.character(y$samples$group))
## }
## keep <- rowSums(cpm(y) > 1) >= 2
## y <- y[keep, ]
## y <- calcNormFactors(y)
## if (length(paired) == 0) {
## design <- model.matrix(~0 + y$samples$group, data = y$samples)
## colnames(design) <- levels(y$samples$group)
## }
## else {
## if (length(paired) > 0 & independent == FALSE)
## stop("When providing values under 'paired' also set independent=TRUE")
## Subject <- factor(paired[samples %in% cmp[j, ]])
## Treat <- y$samples$group
## design <- model.matrix(~Subject + Treat)
## levels(design) <- levels(y$samples$group)
## }
## y <- estimateGLMCommonDisp(y, design, verbose = TRUE)
## y <- estimateGLMTrendedDisp(y, design)
## y <- estimateGLMTagwiseDisp(y, design)
## fit <- glmFit(y, design)
## if (independent == TRUE) {
## mycomp <- paste(cmp[j, 1], cmp[j, 2], sep = "-")
## }
## else {
## mycomp <- paste(cmp[, 1], cmp[, 2], sep = "-")
## }
## if (length(paired) == 0)
## contrasts <- makeContrasts(contrasts = mycomp, levels = design)
## for (i in seq(along = mycomp)) {
## if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## }
## else {
## lrt <- glmLRT(fit)
## }
## deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## colnames(deg) <- paste(paste(mycomp[i], collapse = "_"),
## colnames(deg), sep = "_")
## edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## }
## if (nchar(mdsplot) > 0) {
## pdf(paste("./results/sample_MDS_", paste(unique(subset),
## collapse = "-"), ".pdf", sep = ""))
## plotMDS(y)
## dev.off()
## }
## }
## return(edgeDF)
## }
## debug: if (class(cmp) != "matrix" & length(cmp) == 2) cmp <- t(as.matrix(cmp))
## debug: samples <- as.character(targets$Factor)
## debug: names(samples) <- paste(as.character(targets$SampleName), "",
## sep = "")
## debug: countDF <- countDF[, names(samples)]
## debug: countDF[is.na(countDF)] <- 0
## debug: edgeDF <- data.frame(row.names = rownames(countDF))
## debug: group <- as.character(samples)
## debug: if (independent == TRUE) {
## loopv <- seq(along = cmp[, 1])
## } else {
## loopv <- 1
## }
## debug: loopv <- 1
## debug: for (j in loopv) {
## y <- DGEList(counts = countDF, group = group)
## if (independent == TRUE) {
## subset <- samples[samples %in% cmp[j, ]]
## y <- y[, names(subset)]
## y$samples$group <- factor(as.character(y$samples$group))
## }
## keep <- rowSums(cpm(y) > 1) >= 2
## y <- y[keep, ]
## y <- calcNormFactors(y)
## if (length(paired) == 0) {
## design <- model.matrix(~0 + y$samples$group, data = y$samples)
## colnames(design) <- levels(y$samples$group)
## }
## else {
## if (length(paired) > 0 & independent == FALSE)
## stop("When providing values under 'paired' also set independent=TRUE")
## Subject <- factor(paired[samples %in% cmp[j, ]])
## Treat <- y$samples$group
## design <- model.matrix(~Subject + Treat)
## levels(design) <- levels(y$samples$group)
## }
## y <- estimateGLMCommonDisp(y, design, verbose = TRUE)
## y <- estimateGLMTrendedDisp(y, design)
## y <- estimateGLMTagwiseDisp(y, design)
## fit <- glmFit(y, design)
## if (independent == TRUE) {
## mycomp <- paste(cmp[j, 1], cmp[j, 2], sep = "-")
## }
## else {
## mycomp <- paste(cmp[, 1], cmp[, 2], sep = "-")
## }
## if (length(paired) == 0)
## contrasts <- makeContrasts(contrasts = mycomp, levels = design)
## for (i in seq(along = mycomp)) {
## if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## }
## else {
## lrt <- glmLRT(fit)
## }
## deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## colnames(deg) <- paste(paste(mycomp[i], collapse = "_"),
## colnames(deg), sep = "_")
## edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## }
## if (nchar(mdsplot) > 0) {
## pdf(paste("./results/sample_MDS_", paste(unique(subset),
## collapse = "-"), ".pdf", sep = ""))
## plotMDS(y)
## dev.off()
## }
## }
## debug: y <- DGEList(counts = countDF, group = group)
## debug: if (independent == TRUE) {
## subset <- samples[samples %in% cmp[j, ]]
## y <- y[, names(subset)]
## y$samples$group <- factor(as.character(y$samples$group))
## }
## debug: keep <- rowSums(cpm(y) > 1) >= 2
## debug: y <- y[keep, ]
## debug: y <- calcNormFactors(y)
## debug: if (length(paired) == 0) {
## design <- model.matrix(~0 + y$samples$group, data = y$samples)
## colnames(design) <- levels(y$samples$group)
## } else {
## if (length(paired) > 0 & independent == FALSE)
## stop("When providing values under 'paired' also set independent=TRUE")
## Subject <- factor(paired[samples %in% cmp[j, ]])
## Treat <- y$samples$group
## design <- model.matrix(~Subject + Treat)
## levels(design) <- levels(y$samples$group)
## }
## debug: design <- model.matrix(~0 + y$samples$group, data = y$samples)
## debug: colnames(design) <- levels(y$samples$group)
## debug: y <- estimateGLMCommonDisp(y, design, verbose = TRUE)
## Disp = 0.10358 , BCV = 0.3218
## debug: y <- estimateGLMTrendedDisp(y, design)
## debug: y <- estimateGLMTagwiseDisp(y, design)
## debug: fit <- glmFit(y, design)
## debug: if (independent == TRUE) {
## mycomp <- paste(cmp[j, 1], cmp[j, 2], sep = "-")
## } else {
## mycomp <- paste(cmp[, 1], cmp[, 2], sep = "-")
## }
## debug: mycomp <- paste(cmp[, 1], cmp[, 2], sep = "-")
## debug: if (length(paired) == 0) contrasts <- makeContrasts(contrasts = mycomp,
## levels = design)
## debug: contrasts <- makeContrasts(contrasts = mycomp, levels = design)
## debug: for (i in seq(along = mycomp)) {
## if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## }
## else {
## lrt <- glmLRT(fit)
## }
## deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## colnames(deg) <- paste(paste(mycomp[i], collapse = "_"),
## colnames(deg), sep = "_")
## edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## }
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (length(paired) == 0) {
## lrt <- glmLRT(fit, contrast = contrasts[, i])
## } else {
## lrt <- glmLRT(fit)
## }
## debug: lrt <- glmLRT(fit, contrast = contrasts[, i])
## debug: deg <- as.data.frame(topTags(lrt, n = length(rownames(y))))
## debug: colnames(deg) <- paste(paste(mycomp[i], collapse = "_"), colnames(deg),
## sep = "_")
## debug: edgeDF <- cbind(edgeDF, deg[rownames(edgeDF), ])
## debug: if (nchar(mdsplot) > 0) {
## pdf(paste("./results/sample_MDS_", paste(unique(subset),
## collapse = "-"), ".pdf", sep = ""))
## plotMDS(y)
## dev.off()
## }
## debug: return(edgeDF)
## exiting from: systemPipeR::run_edgeR(countDF = countDF, targets = targets,
## cmp = cmp[[1]], independent = FALSE, mdsplot = "")str(edgeDF)## 'data.frame': 29699 obs. of 45 variables:
## $ M1-A1_logFC : num 0.307 0.198 0.34 0.34 0.669 ...
## $ M1-A1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M1-A1_LR : num 0.5 0.296 0.318 0.96 0.849 ...
## $ M1-A1_PValue : num 0.479 0.587 0.573 0.327 0.357 ...
## $ M1-A1_FDR : num 1 1 1 1 1 ...
## $ M1-V1_logFC : num -0.2241 0.1591 -0.0991 0.3239 0.1076 ...
## $ M1-V1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M1-V1_LR : num 0.2673 0.1909 0.0271 0.8735 0.0228 ...
## $ M1-V1_PValue : num 0.605 0.662 0.869 0.35 0.88 ...
## $ M1-V1_FDR : num 0.968 0.978 0.995 0.909 0.995 ...
## $ A1-V1_logFC : num -0.5312 -0.0391 -0.439 -0.0157 -0.5614 ...
## $ A1-V1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ A1-V1_LR : num 1.49756 0.0116 0.53156 0.00206 0.61461 ...
## $ A1-V1_PValue : num 0.221 0.914 0.466 0.964 0.433 ...
## $ A1-V1_FDR : num 1 1 1 1 1 ...
## $ M6-A6_logFC : num -1.1162 0.0832 -0.1386 -0.1854 -0.2889 ...
## $ M6-A6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M6-A6_LR : num 6.5097 0.053 0.0522 0.2872 0.1771 ...
## $ M6-A6_PValue : num 0.0107 0.8179 0.8192 0.592 0.6739 ...
## $ M6-A6_FDR : num 0.141 0.97 0.97 0.912 0.937 ...
## $ M6-V6_logFC : num -1.284 -0.185 -1.185 -0.68 -0.398 ...
## $ M6-V6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M6-V6_LR : num 8.569 0.266 3.772 3.84 0.343 ...
## $ M6-V6_PValue : num 0.00342 0.6059 0.0521 0.05004 0.55828 ...
## $ M6-V6_FDR : num 0.147 0.986 0.511 0.504 0.981 ...
## $ A6-V6_logFC : num -0.168 -0.269 -1.046 -0.495 -0.109 ...
## $ A6-V6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ A6-V6_LR : num 0.152 0.557 2.959 2.041 0.026 ...
## $ A6-V6_PValue : num 0.6968 0.4554 0.0854 0.1531 0.8719 ...
## $ A6-V6_FDR : num 1 1 0.889 1 1 ...
## $ M12-A12_logFC : num -1.021 -0.247 0.104 -0.251 -0.169 ...
## $ M12-A12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ M12-A12_LR : num 5.4576 0.4582 0.0294 0.525 0.0602 ...
## $ M12-A12_PValue: num 0.0195 0.4985 0.8639 0.4687 0.8062 ...
## $ M12-A12_FDR : num 0.16 0.775 0.954 0.754 0.931 ...
## $ M12-V12_logFC : num -1.728 -0.587 -2.808 -0.283 -0.677 ...
## $ M12-V12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ M12-V12_LR : num 15.1 2.559 19.029 0.668 0.948 ...
## $ M12-V12_PValue: num 1.02e-04 1.10e-01 1.29e-05 4.14e-01 3.30e-01 ...
## $ M12-V12_FDR : num 0.00676 0.49483 0.00136 0.77717 0.72591 ...
## $ A12-V12_logFC : num -0.707 -0.3401 -2.9122 -0.0324 -0.5081 ...
## $ A12-V12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ A12-V12_LR : num 2.66751 0.87762 20.45825 0.00877 0.55889 ...
## $ A12-V12_PValue: num 1.02e-01 3.49e-01 6.09e-06 9.25e-01 4.55e-01 ...
## $ A12-V12_FDR : num 0.74581 0.9398 0.00229 0.99732 0.96621 ...edgeDF## M1-A1_logFC M1-A1_logCPM M1-A1_LR M1-A1_PValue M1-A1_FDR M1-V1_logFC
## AT1G01010 3.071825e-01 5.1056531712 5.003612e-01 4.793415e-01 1.0000000000 -2.240632e-01
## AT1G01020 1.982376e-01 3.5271659050 2.958419e-01 5.865010e-01 1.0000000000 1.590885e-01
## AT1G01030 3.399341e-01 3.4304291411 3.175254e-01 5.730986e-01 1.0000000000 -9.909402e-02
## AT1G01040 3.396633e-01 6.3128156908 9.599576e-01 3.271975e-01 1.0000000000 3.239473e-01
## AT1G01046 6.689327e-01 0.4467076771 8.491142e-01 3.568030e-01 1.0000000000 1.075644e-01
## AT1G01050 6.472866e-02 5.5062711559 3.200508e-02 8.580165e-01 1.0000000000 -2.534781e-01
## AT1G01060 1.580283e+00 3.4587690203 9.800418e+00 1.744722e-03 0.6960714527 3.131730e+00
## AT1G01070 -7.340948e-01 0.7402392544 7.104416e-01 3.992972e-01 1.0000000000 -1.260630e+00
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 2.655583e-01 5.3384877922 4.283437e-01 5.128028e-01 1.0000000000 5.330859e-02
## AT1G01090 2.069099e-01 7.0318251298 2.784823e-01 5.976977e-01 1.0000000000 5.524690e-02
## AT1G01100 3.363970e-01 7.1502373443 7.131034e-01 3.984155e-01 1.0000000000 2.073476e-01
## AT1G01110 -3.152643e-01 0.6862047177 2.062385e-01 6.497317e-01 1.0000000000 -4.275560e-01
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 3.972628e-01 7.0576612165 1.070849e+00 3.007537e-01 1.0000000000 3.353836e-01
## AT1G01130 4.170787e-02 -0.1931336905 3.490141e-03 9.528904e-01 1.0000000000 8.168900e-01
## AT1G01140 3.538394e-01 7.1985973651 7.771371e-01 3.780181e-01 1.0000000000 3.032262e-01
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 2.093154e-01 5.2604591779 3.992322e-01 5.274860e-01 1.0000000000 1.210644e-01
## AT1G01170 5.663073e-01 5.0518544572 1.552024e+00 2.128368e-01 1.0000000000 -3.399076e-01
## AT1G01180 -1.524292e-01 3.7683297591 1.089592e-01 7.413322e-01 1.0000000000 -6.679357e-01
## AT1G01183 NA NA NA NA NA NA
## M1-V1_logCPM M1-V1_LR M1-V1_PValue M1-V1_FDR A1-V1_logFC A1-V1_logCPM
## AT1G01010 5.1056531712 2.673280e-01 6.051299e-01 9.684419e-01 -5.312457e-01 5.1056531712
## AT1G01020 3.5271659050 1.909062e-01 6.621634e-01 9.778846e-01 -3.914907e-02 3.5271659050
## AT1G01030 3.4304291411 2.713914e-02 8.691489e-01 9.949260e-01 -4.390281e-01 3.4304291411
## AT1G01040 6.3128156908 8.735166e-01 3.499836e-01 9.092843e-01 -1.571597e-02 6.3128156908
## AT1G01046 0.4467076771 2.284209e-02 8.798684e-01 9.949260e-01 -5.613683e-01 0.4467076771
## AT1G01050 5.5062711559 4.925967e-01 4.827713e-01 9.496030e-01 -3.182067e-01 5.5062711559
## AT1G01060 3.4587690203 3.352764e+01 7.025861e-09 8.409078e-06 1.551447e+00 3.4587690203
## AT1G01070 0.7402392544 2.238227e+00 1.346353e-01 7.619116e-01 -5.265353e-01 0.7402392544
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 5.3384877922 1.730738e-02 8.953343e-01 9.949260e-01 -2.122497e-01 5.3384877922
## AT1G01090 7.0318251298 1.987768e-02 8.878792e-01 9.949260e-01 -1.516630e-01 7.0318251298
## AT1G01100 7.1502373443 2.714460e-01 6.023634e-01 9.684419e-01 -1.290494e-01 7.1502373443
## AT1G01110 0.6862047177 3.829220e-01 5.360436e-01 9.571949e-01 -1.122918e-01 0.6862047177
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 7.0576612165 7.640028e-01 3.820788e-01 9.206226e-01 -6.187918e-02 7.0576612165
## AT1G01130 -0.1931336905 1.284127e+00 2.571330e-01 8.716759e-01 7.751821e-01 -0.1931336905
## AT1G01140 7.1985973651 5.711565e-01 4.497997e-01 9.430704e-01 -5.061324e-02 7.1985973651
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 5.2604591779 1.338414e-01 7.144819e-01 9.803661e-01 -8.825100e-02 5.2604591779
## AT1G01170 5.0518544572 5.651790e-01 4.521811e-01 9.430704e-01 -9.062149e-01 5.0518544572
## AT1G01180 3.7683297591 2.100603e+00 1.472411e-01 7.771993e-01 -5.155065e-01 3.7683297591
## AT1G01183 NA NA NA NA NA NA
## A1-V1_LR A1-V1_PValue A1-V1_FDR M6-A6_logFC M6-A6_logCPM M6-A6_LR
## AT1G01010 1.497563e+00 2.210468e-01 1.000000e+00 -1.116224e+00 5.1056531712 6.509700e+00
## AT1G01020 1.160132e-02 9.142262e-01 1.000000e+00 8.322345e-02 3.5271659050 5.303064e-02
## AT1G01030 5.315579e-01 4.659526e-01 1.000000e+00 -1.386105e-01 3.4304291411 5.222713e-02
## AT1G01040 2.060839e-03 9.637913e-01 1.000000e+00 -1.854372e-01 6.3128156908 2.871585e-01
## AT1G01046 6.146139e-01 4.330559e-01 1.000000e+00 -2.888513e-01 0.4467076771 1.770847e-01
## AT1G01050 7.802069e-01 3.770779e-01 1.000000e+00 2.628204e-01 5.5062711559 5.443440e-01
## AT1G01060 8.934552e+00 2.798261e-03 6.709752e-01 6.042778e-01 3.4587690203 8.398749e-01
## AT1G01070 4.834145e-01 4.868797e-01 1.000000e+00 -6.497371e-01 0.7402392544 1.033115e+00
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 2.742838e-01 6.004725e-01 1.000000e+00 7.657245e-01 5.3384877922 3.541511e+00
## AT1G01090 1.497880e-01 6.987380e-01 1.000000e+00 4.646074e-01 7.0318251298 1.402017e+00
## AT1G01100 1.052511e-01 7.456169e-01 1.000000e+00 -1.161308e-02 7.1502373443 8.576734e-04
## AT1G01110 2.769785e-02 8.678212e-01 1.000000e+00 -7.636104e-01 0.6862047177 1.238867e+00
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 2.606373e-02 8.717448e-01 1.000000e+00 1.310891e+00 7.0576612165 1.124456e+01
## AT1G01130 1.177320e+00 2.779023e-01 1.000000e+00 -3.172972e-02 -0.1931336905 1.793065e-03
## AT1G01140 1.594058e-02 8.995293e-01 1.000000e+00 6.705190e-01 7.1985973651 2.770663e+00
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 7.135186e-02 7.893786e-01 1.000000e+00 9.517826e-02 5.2604591779 8.529927e-02
## AT1G01170 3.964645e+00 4.646531e-02 1.000000e+00 4.462037e-01 5.0518544572 9.837791e-01
## AT1G01180 1.280137e+00 2.578736e-01 1.000000e+00 -7.721081e-02 3.7683297591 2.992933e-02
## AT1G01183 NA NA NA NA NA NA
## M6-A6_PValue M6-A6_FDR M6-V6_logFC M6-V6_logCPM M6-V6_LR M6-V6_PValue
## AT1G01010 1.072876e-02 1.412067e-01 -1.284078e+00 5.1056531712 8.569484e+00 3.418441e-03
## AT1G01020 8.178712e-01 9.699191e-01 -1.853898e-01 3.5271659050 2.661925e-01 6.058974e-01
## AT1G01030 8.192323e-01 9.700061e-01 -1.184565e+00 3.4304291411 3.772498e+00 5.210177e-02
## AT1G01040 5.920472e-01 9.124516e-01 -6.801532e-01 6.3128156908 3.840134e+00 5.003952e-02
## AT1G01046 6.738907e-01 9.371147e-01 -3.976400e-01 0.4467076771 3.426978e-01 5.582761e-01
## AT1G01050 4.606380e-01 8.557642e-01 -1.067200e-01 5.5062711559 9.018894e-02 7.639371e-01
## AT1G01060 3.594325e-01 7.935362e-01 8.289292e-01 3.4587690203 1.676803e+00 1.953497e-01
## AT1G01070 3.094281e-01 7.568161e-01 -4.862182e-01 0.7402392544 5.879995e-01 4.431937e-01
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 5.985091e-02 3.598545e-01 4.842673e-01 5.3384877922 1.431015e+00 2.315988e-01
## AT1G01090 2.363862e-01 6.875486e-01 3.258259e-01 7.0318251298 6.916226e-01 4.056130e-01
## AT1G01100 9.766364e-01 9.983192e-01 1.706623e-02 7.1502373443 1.853004e-03 9.656644e-01
## AT1G01110 2.656895e-01 7.158709e-01 -1.200662e+00 0.6862047177 3.131395e+00 7.679801e-02
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 7.985678e-04 3.004435e-02 4.353024e-01 7.0576612165 1.281667e+00 2.575893e-01
## AT1G01130 9.662240e-01 9.959386e-01 -2.094435e-01 -0.1931336905 8.198044e-02 7.746313e-01
## AT1G01140 9.600638e-02 4.498464e-01 -5.942004e-02 7.1985973651 2.198475e-02 8.821277e-01
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 7.702404e-01 9.605611e-01 -5.481313e-02 5.2604591779 2.838993e-02 8.661954e-01
## AT1G01170 3.212676e-01 7.643526e-01 3.803506e-01 5.0518544572 7.172454e-01 3.970490e-01
## AT1G01180 8.626507e-01 9.804012e-01 3.470148e-01 3.7683297591 6.041039e-01 4.370165e-01
## AT1G01183 NA NA NA NA NA NA
## M6-V6_FDR A6-V6_logFC A6-V6_logCPM A6-V6_LR A6-V6_PValue A6-V6_FDR
## AT1G01010 1.474395e-01 -1.678537e-01 5.1056531712 1.517799e-01 6.968402e-01 0.999964129
## AT1G01020 9.858516e-01 -2.686133e-01 3.5271659050 5.571096e-01 4.554272e-01 0.999964129
## AT1G01030 5.114039e-01 -1.045954e+00 3.4304291411 2.959102e+00 8.539535e-02 0.888761338
## AT1G01040 5.039681e-01 -4.947160e-01 6.3128156908 2.041096e+00 1.530993e-01 0.999964129
## AT1G01046 9.807330e-01 -1.087887e-01 0.4467076771 2.598493e-02 8.719371e-01 0.999964129
## AT1G01050 9.973490e-01 -3.695404e-01 5.5062711559 1.077054e+00 2.993576e-01 0.999964129
## AT1G01060 8.178006e-01 2.246514e-01 3.4587690203 1.116084e-01 7.383204e-01 0.999964129
## AT1G01070 9.620096e-01 1.635190e-01 0.7402392544 6.862761e-02 7.933456e-01 0.999964129
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 8.512700e-01 -2.814573e-01 5.3384877922 4.831754e-01 4.869875e-01 0.999964129
## AT1G01090 9.484735e-01 -1.387815e-01 7.0318251298 1.256066e-01 7.230315e-01 0.999964129
## AT1G01100 9.978412e-01 2.867930e-02 7.1502373443 5.232655e-03 9.423336e-01 0.999964129
## AT1G01110 6.000334e-01 -4.370515e-01 0.6862047177 4.375335e-01 5.083153e-01 0.999964129
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 8.784774e-01 -8.755890e-01 7.0576612165 5.106810e+00 2.383210e-02 0.586007631
## AT1G01130 9.973490e-01 -1.777138e-01 -0.1931336905 5.895857e-02 8.081496e-01 0.999964129
## AT1G01140 9.973490e-01 -7.299390e-01 7.1985973651 3.279834e+00 7.013601e-02 0.843041035
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 9.973490e-01 -1.499914e-01 5.2604591779 2.123345e-01 6.449438e-01 0.999964129
## AT1G01170 9.466484e-01 -6.585310e-02 5.0518544572 2.151888e-02 8.833742e-01 0.999964129
## AT1G01180 9.612756e-01 4.242256e-01 3.7683297591 9.019850e-01 3.422500e-01 0.999964129
## AT1G01183 NA NA NA NA NA NA
## M12-A12_logFC M12-A12_logCPM M12-A12_LR M12-A12_PValue M12-A12_FDR M12-V12_logFC
## AT1G01010 -1.021283e+00 5.1056531712 5.457650e+00 1.948283e-02 1.604715e-01 -1.728291e+00
## AT1G01020 -2.467412e-01 3.5271659050 4.581919e-01 4.984702e-01 7.746951e-01 -5.868087e-01
## AT1G01030 1.044802e-01 3.4304291411 2.937847e-02 8.639081e-01 9.542807e-01 -2.807670e+00
## AT1G01040 -2.507635e-01 6.3128156908 5.250289e-01 4.687044e-01 7.536237e-01 -2.831444e-01
## AT1G01046 -1.689051e-01 0.4467076771 6.019614e-02 8.061862e-01 9.314756e-01 -6.770085e-01
## AT1G01050 5.642023e-01 5.5062711559 2.507762e+00 1.132867e-01 3.853947e-01 -2.808203e-02
## AT1G01060 -3.444641e-01 3.4587690203 4.965508e-01 4.810196e-01 7.618328e-01 3.566354e-01
## AT1G01070 -1.051511e+00 0.7402392544 2.893644e+00 8.892957e-02 3.406684e-01 7.322868e-03
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 9.486183e-01 5.3384877922 5.408149e+00 2.004296e-02 1.629128e-01 7.646060e-01
## AT1G01090 7.557157e-01 7.0318251298 3.682214e+00 5.499579e-02 2.652819e-01 2.060879e-01
## AT1G01100 1.898774e-01 7.1502373443 2.289599e-01 6.322961e-01 8.514500e-01 -3.007640e-01
## AT1G01110 7.397920e-01 0.6862047177 1.255793e+00 2.624489e-01 5.810503e-01 -2.627754e-01
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 1.149689e+00 7.0576612165 8.691184e+00 3.197529e-03 6.342670e-02 -3.658529e-01
## AT1G01130 -1.909465e-01 -0.1931336905 6.634873e-02 7.967292e-01 9.269138e-01 -2.609082e-02
## AT1G01140 5.854569e-02 7.1985973651 2.130924e-02 8.839397e-01 9.612405e-01 1.874641e-01
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 9.101353e-02 5.2604591779 7.814011e-02 7.798339e-01 9.193820e-01 1.647979e-01
## AT1G01170 3.904340e-01 5.0518544572 7.558003e-01 3.846460e-01 6.932505e-01 1.866135e-01
## AT1G01180 -4.471208e-02 3.7683297591 1.004493e-02 9.201662e-01 9.748925e-01 -6.638176e-02
## AT1G01183 NA NA NA NA NA NA
## M12-V12_logCPM M12-V12_LR M12-V12_PValue M12-V12_FDR A12-V12_logFC A12-V12_logCPM
## AT1G01010 5.1056531712 1.509980e+01 1.019739e-04 6.757093e-03 -7.070075e-01 5.1056531712
## AT1G01020 3.5271659050 2.558583e+00 1.096969e-01 4.948336e-01 -3.400675e-01 3.5271659050
## AT1G01030 3.4304291411 1.902872e+01 1.287656e-05 1.362354e-03 -2.912151e+00 3.4304291411
## AT1G01040 6.3128156908 6.676574e-01 4.138695e-01 7.771722e-01 -3.238086e-02 6.3128156908
## AT1G01046 0.4467076771 9.481269e-01 3.301965e-01 7.259060e-01 -5.081034e-01 0.4467076771
## AT1G01050 5.5062711559 6.246728e-03 9.370038e-01 9.849392e-01 -5.922844e-01 5.5062711559
## AT1G01060 3.4587690203 5.272831e-01 4.677514e-01 8.061750e-01 7.010995e-01 3.4587690203
## AT1G01070 0.7402392544 1.390634e-04 9.905912e-01 9.977008e-01 1.058834e+00 0.7402392544
## AT1G01073 NA NA NA NA NA NA
## AT1G01080 5.3384877922 3.523145e+00 6.051749e-02 3.861818e-01 -1.840122e-01 5.3384877922
## AT1G01090 7.0318251298 2.765540e-01 5.989688e-01 8.707395e-01 -5.496278e-01 7.0318251298
## AT1G01100 7.1502373443 5.736104e-01 4.488278e-01 7.959807e-01 -4.906414e-01 7.1502373443
## AT1G01110 0.6862047177 1.611894e-01 6.880638e-01 9.108315e-01 -1.002567e+00 0.6862047177
## AT1G01115 NA NA NA NA NA NA
## AT1G01120 7.0576612165 9.019232e-01 3.422666e-01 7.335242e-01 -1.515542e+00 7.0576612165
## AT1G01130 -0.1931336905 1.074939e-03 9.738450e-01 9.945674e-01 1.648557e-01 -0.1931336905
## AT1G01140 7.1985973651 2.180076e-01 6.405623e-01 8.905572e-01 1.289184e-01 7.1985973651
## AT1G01150 NA NA NA NA NA NA
## AT1G01160 5.2604591779 2.547970e-01 6.137174e-01 8.785531e-01 7.378439e-02 5.2604591779
## AT1G01170 5.0518544572 1.727360e-01 6.776916e-01 9.060926e-01 -2.038205e-01 5.0518544572
## AT1G01180 3.7683297591 2.197663e-02 8.821493e-01 9.716468e-01 -2.166969e-02 3.7683297591
## AT1G01183 NA NA NA NA NA NA
## A12-V12_LR A12-V12_PValue A12-V12_FDR
## AT1G01010 2.667506e+00 1.024164e-01 7.458090e-01
## AT1G01020 8.776236e-01 3.488534e-01 9.398003e-01
## AT1G01030 2.045825e+01 6.094633e-06 2.288475e-03
## AT1G01040 8.769807e-03 9.253894e-01 9.973219e-01
## AT1G01046 5.588851e-01 4.547098e-01 9.662054e-01
## AT1G01050 2.760448e+00 9.662119e-02 7.306380e-01
## AT1G01060 2.034248e+00 1.537902e-01 8.216068e-01
## AT1G01070 2.875411e+00 8.994200e-02 7.161978e-01
## AT1G01073 NA NA NA
## AT1G01080 2.058525e-01 6.500378e-01 9.874064e-01
## AT1G01090 1.956651e+00 1.618720e-01 8.331848e-01
## AT1G01100 1.522857e+00 2.171877e-01 8.763471e-01
## AT1G01110 2.292601e+00 1.299919e-01 7.963358e-01
## AT1G01115 NA NA NA
## AT1G01120 1.484983e+01 1.164184e-04 1.955625e-02
## AT1G01130 4.709191e-02 8.282031e-01 9.947391e-01
## AT1G01140 1.032167e-01 7.480031e-01 9.926409e-01
## AT1G01150 NA NA NA
## AT1G01160 5.124358e-02 8.209133e-01 9.947391e-01
## AT1G01170 2.060892e-01 6.498500e-01 9.874064e-01
## AT1G01180 2.354432e-03 9.612998e-01 9.973219e-01
## AT1G01183 NA NA NA
## [ reached getOption("max.print") -- omitted 29677 rows ]Add gene descriptions
# useMart() call fails if mart is down for maintenance
library("biomaRt")
m <- biomaRt::useMart("plants_mart", dataset="athaliana_eg_gene", host="plants.ensembl.org")
m## Object of class 'Mart':
## Using the plants_mart BioMart database
## Using the athaliana_eg_gene datasetdesc <- biomaRt::getBM(attributes=c("tair_locus", "description"), mart=m)
# desc # too big to print
str(desc)## 'data.frame': 28610 obs. of 2 variables:
## $ tair_locus : chr "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" ...
## $ description: chr "NADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]" "Beta-1,3-N-Acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JTI5]" "RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]" "unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazo"| __truncated__ ...head(desc)## tair_locus
## 1 AT5G16970
## 2 AT4G32100
## 3 AT2G43120
## 4 AT1G30814
## 5 AT3G18710
## 6 AT4G25880
## description
## 1 NADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]
## 2 Beta-1,3-N-Acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JTI5]
## 3 RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]
## 4 unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT1G30814]
## 5 RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJJ8]
## 6 pumilio 6 [Source:TAIR;Acc:AT4G25880]# m <- useMart("ensembl", dataset="xmaculatus_gene_ensembl", host="ensembl.org")
# desc <- biomaRt::getBM(attributes=c("band", "description"), mart=m)
desc <- desc[!base::duplicated(desc[,1]),]
descv <- as.character(desc[,2]); names(descv) <- as.character(desc[,1])
save(descv, file="descv.RData") # save for clusterProfiler work
str(descv)## Named chr [1:28279] "NADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]" ...
## - attr(*, "names")= chr [1:28279] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" ...head(descv)## AT5G16970
## "NADPH-dependent oxidoreductase 2-alkenal reductase [Source:UniProtKB/Swiss-Prot;Acc:Q39172]"
## AT4G32100
## "Beta-1,3-N-Acetylglucosaminyltransferase family protein [Source:UniProtKB/TrEMBL;Acc:F4JTI5]"
## AT2G43120
## "RmlC-like cupins superfamily protein [Source:TAIR;Acc:AT2G43120]"
## AT1G30814
## "unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT1G30814]"
## AT3G18710
## "RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A178VJJ8]"
## AT4G25880
## "pumilio 6 [Source:TAIR;Acc:AT4G25880]"names(descv) # this is the list for clusterProfiler## [1] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" "AT3G18710" "AT4G25880" "AT1G78930"
## [8] "AT3G07950" "AT4G03450" "AT1G71695" "AT1G58983" "AT1G12980" "AT5G41480" "AT5G15008"
## [15] "AT3G51870" "AT4G29950" "AT3G18310" "AT5G07360" "" "AT4G26490" "AT5G46240"
## [22] "AT5G62260" "AT3G25717" "AT1G45223" "AT5G35715" "AT5G41908" "AT2G21390" "AT3G48330"
## [29] "AT4G32710" "AT3G46440" "AT2G21930" "AT3G53910" "AT4G25090" "AT2G18870" "AT1G56250"
## [36] "AT3G16830" "AT5G20470" "AT5G04950" "AT4G13720" "AT5G50110" "AT3G03305" "AT5G66670"
## [43] "AT4G08039" "AT2G38310" "AT2G26900" "AT5G23000" "AT1G66852" "AT1G69810" "AT1G72450"
## [50] "AT5G03560" "AT4G27340" "AT1G76280" "AT3G03272" "AT3G28960" "AT1G65630" "AT3G10210"
## [57] "AT4G27830" "AT1G71390" "AT5G46260" "AT2G32710" "AT5G27680" "AT4G19380" "AT5G61960"
## [64] "AT4G29180" "AT3G09680" "AT1G56233" "AT1G15210" "AT3G63470" "AT2G16970" "AT1G15250"
## [71] "AT1G79700" "AT2G46620" "AT3G46920" "AT2G43750" "AT2G24490" "AT3G57080" "AT3G13820"
## [78] "AT2G15080" "AT1G73360" "AT1G16360" "AT3G49770" "AT4G31660" "AT1G26670" "AT1G52200"
## [85] "AT1G57800" "AT4G23200" "AT1G69460" "AT1G04310" "AT1G08080" "AT2G37678" "AT3G56070"
## [92] "AT5G15420" "AT5G06020" "AT3G15251" "AT1G75550" "AT1G71890" "AT1G05430" "AT4G29810"
## [99] "AT3G02780" "AT4G26560" "AT1G80870" "AT4G23670" "AT2G46225" "AT5G18730" "AT5G67570"
## [106] "AT1G75310" "AT5G29054" "AT2G27700" "AT1G02010" "AT1G47900" "AT5G57625" "AT4G02725"
## [113] "AT1G14315" "AT5G66440" "AT4G35440" "AT3G52460" "AT4G26240" "AT3G55380" "AT2G22320"
## [120] "AT1G26760" "AT1G05250" "AT3G44560" "AT1G67260" "AT4G31950" "AT5G51680" "AT4G10925"
## [127] "AT3G56520" "AT1G24575" "AT4G31690" "AT1G12790" "AT4G34640" "AT4G03340" "AT2G37260"
## [134] "AT5G54610" "AT3G27970" "AT4G13550" "AT1G04850" "AT5G20560" "AT3G17420" "AT3G08780"
## [141] "AT1G31760" "AT5G65470" "AT1G33250" "AT1G74000" "AT3G55660" "AT3G48480" "AT5G66420"
## [148] "AT3G02740" "AT1G55580" "AT1G53903" "AT3G63400" "AT1G19715" "AT5G62750" "AT2G04031"
## [155] "AT3G06130" "AT5G50000" "AT1G69430" "AT1G53340" "ATCG00160" "AT3G05660" "AT2G16130"
## [162] "AT5G63820" "AT3G17140" "AT3G24110" "AT1G29890" "AT2G47560" "AT4G28600" "AT1G80290"
## [169] "AT1G56540" "AT2G37390" "AT2G06050" "AT3G20920" "AT5G26220" "AT3G54830" "AT3G09190"
## [176] "AT3G05545" "AT1G48650" "AT4G27400" "AT2G35250" "AT5G15730" "AT1G22670" "AT1G07030"
## [183] "AT5G61930" "AT4G27260" "AT1G69860" "AT1G10120" "AT5G08760" "AT2G38390" "AT1G43650"
## [190] "AT3G26470" "AT1G09960" "AT4G27370" "AT2G25250" "AT5G42110" "AT1G51990" "AT5G23030"
## [197] "AT3G51100" "AT3G29580" "AT3G28370" "AT2G15710" "AT5G20250" "AT4G21470" "AT4G05220"
## [204] "AT4G04730" "AT2G33520" "AT1G53625" "AT1G63360" "AT1G33330" "AT3G26840" "AT1G74929"
## [211] "AT3G29010" "AT3G10450" "AT4G34800" "AT4G28340" "AT1G63430" "AT3G14510" "AT1G80720"
## [218] "AT1G69770" "AT1G08460" "AT1G78710" "AT4G03820" "AT3G28930" "AT3G52950" "AT2G26330"
## [225] "AT1G08610" "AT3G57620" "AT5G08070" "AT1G17540" "AT2G39280" "AT1G27380" "AT1G58643"
## [232] "AT5G08450" "AT5G14030" "AT1G48953" "AT5G66080" "AT2G47730" "AT2G02310" "AT4G11020"
## [239] "AT3G50670" "AT1G51440" "AT2G07719" "AT1G18871" "AT1G25210" "AT1G21610" "AT5G05340"
## [246] "AT5G45440" "AT4G05110" "AT5G25380" "AT3G44080" "AT1G79710" "AT5G56920" "AT5G38000"
## [253] "AT5G15050" "AT3G50370" "AT1G80840" "AT5G53670" "ATMG00440" "AT2G23160" "AT4G29940"
## [260] "AT4G23640" "AT3G09550" "AT3G07568" "AT5G44630" "AT2G40900" "AT2G39140" "AT5G05950"
## [267] "AT3G48670" "AT5G63810" "AT5G02340" "AT4G32470" "AT3G11270" "AT2G46440" "AT2G17630"
## [274] "AT5G24100" "AT4G29330" "AT2G15470" "AT2G47790" "AT1G71300" "AT5G48545" "AT1G49490"
## [281] "AT3G08530" "AT1G09795" "AT2G19190" "AT5G56950" "AT3G22380" "AT2G41835" "AT4G23590"
## [288] "AT3G05140" "AT1G48690" "AT4G35620" "AT3G29750" "AT1G49570" "AT3G54500" "AT2G45130"
## [295] "AT1G68470" "AT5G58400" "AT2G39110" "AT5G39510" "AT4G32660" "AT1G75580" "AT5G23090"
## [302] "AT5G45920" "AT3G52760" "AT5G52750" "AT5G18830" "AT3G27460" "AT2G38910" "AT3G62780"
## [309] "AT3G28210" "AT3G47675" "AT2G44360" "AT5G50720" "AT2G36060" "AT1G26400" "AT4G19470"
## [316] "AT4G04360" "AT3G25060" "AT2G07684" "AT1G72980" "AT5G51840" "AT4G17490" "AT1G59970"
## [323] "AT2G32950" "AT3G26240" "AT3G04860" "AT1G11520" "AT2G24420" "AT1G30640" "AT2G40950"
## [330] "AT5G21930" "AT1G26440" "AT1G51320" "AT5G24240" "AT1G22070" "AT4G25310" "AT1G26700"
## [337] "AT3G55990" "AT3G43940" "AT2G40750" "AT3G09920" "AT3G54900" "AT3G16500" "AT5G25480"
## [344] "AT3G12910" "AT2G05100" "AT3G18510" "AT1G73603" "AT4G08876" "AT1G55650" "AT5G65130"
## [351] "AT3G25730" "AT1G78180" "AT2G28960" "AT3G48680" "AT2G04842" "AT3G63360" "AT1G55928"
## [358] "AT3G18010" "AT4G18550" "AT4G12000" "AT1G29880" "AT3G01250" "AT5G27280" "AT1G53645"
## [365] "AT3G46070" "AT3G19120" "AT5G37180" "AT4G37760" "AT3G01840" "AT2G20690" "AT4G02510"
## [372] "AT5G10110" "AT2G45580" "AT2G31360" "AT3G14290" "AT3G23090" "AT3G08690" "AT2G01830"
## [379] "AT3G48540" "AT4G34750" "AT1G06240" "AT5G05050" "AT1G72330" "AT3G54300" "AT5G42470"
## [386] "AT5G51380" "AT4G28150" "AT3G36659" "AT1G20840" "AT4G33040" "AT1G45050" "AT5G61770"
## [393] "AT3G58970" "AT1G52500" "AT5G58750" "AT3G13010" "AT1G10430" "AT3G01820" "AT2G31865"
## [400] "AT3G54630" "AT1G05670" "AT5G66240" "AT4G19990" "AT4G18380" "AT1G64110" "AT2G16710"
## [407] "AT5G47050" "AT1G65220" "AT1G13635" "AT4G27415" "AT2G29080" "AT4G03635" "AT5G45095"
## [414] "AT3G45720" "AT5G65000" "AT2G46280" "AT4G34200" "AT2G19870" "AT5G35660" "AT3G15548"
## [421] "AT5G34908" "AT2G14210" "AT5G59800" "AT3G54530" "AT1G54950" "AT2G28520" "ATMG00850"
## [428] "AT4G12800" "AT3G62900" "AT3G54410" "AT1G55730" "AT1G07310" "AT1G77230" "AT1G52400"
## [435] "AT5G60580" "AT5G24790" "AT5G48780" "AT5G41490" "AT3G22320" "AT5G22820" "AT2G22345"
## [442] "AT2G44440" "AT4G30993" "AT3G57440" "AT5G60260" "AT5G14740" "AT1G16430" "AT5G66760"
## [449] "AT5G54225" "AT1G27752" "AT3G09700" "AT2G16580" "AT5G47510" "AT3G50390" "AT1G14880"
## [456] "AT4G34350" "AT4G14368" "AT1G11190" "AT2G30730" "AT3G23070" "AT5G16950" "AT2G23690"
## [463] "AT2G40710" "AT2G30925" "AT3G14360" "AT1G43100" "AT1G26650" "AT5G43066" "AT5G20300"
## [470] "AT3G01550" "AT5G49950" "AT1G54420" "AT5G40530" "AT2G02930" "AT4G38730" "AT4G22320"
## [477] "AT2G32040" "AT5G45850" "AT3G58010" "AT3G03740" "AT3G53900" "AT3G08970" "AT1G34640"
## [484] "AT5G38420" "AT4G11790" "AT3G62620" "AT5G37910" "AT2G34940" "AT2G18720" "AT3G51780"
## [491] "AT4G05130" "AT5G11320" "AT5G63910" "AT2G20320" "AT3G14880" "AT2G16190" "AT1G50310"
## [498] "AT4G02730" "AT3G45600" "AT4G11175" "AT4G21350" "AT3G25573" "AT4G25670" "AT2G27300"
## [505] "AT1G49430" "AT3G59110" "AT3G04570" "AT5G59120" "AT2G31800" "AT5G43420" "AT1G74240"
## [512] "AT3G10320" "AT3G02640" "AT3G03110" "ATCG00065" "AT1G01760" "AT3G28917" "AT3G19960"
## [519] "AT3G14820" "AT3G45630" "AT2G46420" "AT1G61160" "AT4G30410" "AT4G27140" "AT5G04347"
## [526] "AT3G20560" "AT2G36420" "AT1G47480" "AT2G33580" "AT5G53330" "AT1G65820" "AT1G22900"
## [533] "AT5G11050" "AT1G76820" "AT5G61700" "AT2G38010" "AT1G52080" "AT2G20625" "AT2G19490"
## [540] "AT1G35180" "AT1G30070" "AT1G35210" "AT1G10410" "AT3G12050" "AT3G03341" "AT5G07160"
## [547] "AT1G73740" "AT3G50120" "AT4G16780" "AT2G35320" "AT1G53350" "AT1G34110" "AT1G17240"
## [554] "AT3G15970" "AT3G01970" "AT4G15830" "AT2G47400" "AT4G09580" "AT1G61730" "AT1G29260"
## [561] "AT4G33905" "AT4G02940" "AT2G40360" "AT1G33890" "AT1G08040" "AT3G47670" "AT1G63522"
## [568] "AT5G09900" "AT1G08810" "AT3G26810" "AT1G09210" "AT5G64920" "AT5G65590" "AT1G70080"
## [575] "AT4G02930" "AT4G38480" "AT3G27190" "AT1G10522" "AT1G04570" "AT4G04370" "AT4G34970"
## [582] "AT5G60470" "AT5G10430" "AT3G10130" "AT4G33610" "AT5G52790" "AT1G01830" "AT5G44020"
## [589] "AT1G12340" "AT4G23882" "AT3G54826" "AT4G33690" "AT1G67590" "AT1G69080" "AT1G31400"
## [596] "AT3G08040" "ATMG01350" "AT3G10680" "AT1G73300" "AT3G52590" "AT5G47840" "AT2G42240"
## [603] "AT5G04850" "AT1G05760" "AT1G30530" "AT1G12480" "AT2G35270" "AT2G46330" "AT1G76850"
## [610] "AT1G73570" "AT1G44130" "AT1G67340" "AT5G44870" "AT1G43666" "AT5G60400" "AT5G59010"
## [617] "AT3G54920" "AT1G08630" "AT3G22040" "AT3G47836" "AT5G50115" "AT2G27035" "AT1G66150"
## [624] "AT2G03300" "AT5G45790" "AT2G35610" "AT5G27700" "AT1G04640" "AT1G56500" "AT2G30460"
## [631] "AT3G44570" "AT3G02590" "AT2G19560" "AT5G19970" "AT5G48430" "AT3G18430" "AT4G33490"
## [638] "AT5G18130" "AT1G77120" "AT1G50590" "AT5G05470" "AT3G44735" "AT2G31740" "AT3G57570"
## [645] "AT1G17147" "AT4G27670" "AT1G44740" "AT1G08005" "AT3G28300" "AT3G23830" "AT4G33220"
## [652] "AT1G24380" "AT4G24660" "AT4G08810" "AT3G32980" "AT3G25030" "AT4G29580" "AT4G14226"
## [659] "AT3G62200" "AT5G40730" "AT4G21600" "AT1G26796" "AT3G54060" "AT3G19830" "AT5G09805"
## [666] "AT4G05360" "AT3G43810" "AT2G14880" "AT3G03780" "AT3G01030" "AT1G68500" "ATMG01300"
## [673] "AT3G54110" "AT5G41250" "AT5G12430" "AT4G03350" "AT1G15500" "AT4G24026" "AT3G44230"
## [680] "AT1G77760" "AT3G24780" "AT4G25970" "AT1G24062" "AT5G37620" "AT3G06150" "AT5G19770"
## [687] "AT5G07040" "AT1G53510" "AT3G52750" "AT1G51410" "AT5G27810" "AT1G50020" "AT4G20440"
## [694] "AT4G02482" "AT3G13600" "AT5G59880" "AT4G32050" "AT2G39725" "AT1G22370" "AT2G38660"
## [701] "AT4G00690" "AT3G15380" "AT3G45390" "AT1G53265" "AT4G35640" "AT5G27230" "AT3G13222"
## [708] "AT1G17270" "AT4G17920" "AT4G33360" "AT1G74350" "AT5G54062" "AT1G75230" "AT1G29150"
## [715] "AT1G17140" "AT1G08380" "AT5G11020" "AT1G43560" "AT5G26030" "AT4G24900" "AT4G03190"
## [722] "AT3G56660" "AT1G07700" "AT1G33750" "AT3G28680" "AT3G51880" "AT1G61270" "AT1G14750"
## [729] "AT5G62760" "AT3G18035" "AT1G05900" "AT2G16505" "AT5G17210" "AT5G02190" "AT1G44120"
## [736] "AT4G01995" "AT2G07785" "AT2G41082" "AT1G52990" "AT4G21320" "AT1G37130" "AT5G42957"
## [743] "AT5G48510" "AT4G28365" "AT5G55560" "AT3G14400" "AT5G65820" "AT4G02300" "AT2G25330"
## [750] "AT5G32590" "AT3G18840" "AT1G48175" "ATCG01250" "AT2G28560" "AT5G63190" "AT4G03565"
## [757] "AT1G72140" "AT2G21140" "AT4G00530" "AT2G01300" "AT1G43260" "AT1G14420" "AT1G01710"
## [764] "AT4G15460" "AT2G35240" "AT5G38120" "AT3G16590" "AT4G28170" "AT1G44000" "AT1G73960"
## [771] "AT4G31570" "AT2G35960" "AT1G11360" "AT3G10845" "AT2G33400" "AT5G02810" "AT1G04490"
## [778] "AT1G78476" "AT1G15310" "AT1G13300" "AT3G12010" "AT1G55530" "AT1G47350" "AT3G56390"
## [785] "AT3G19660" "AT1G74458" "AT4G01595" "AT4G30280" "AT4G10050" "AT2G02180" "AT2G42690"
## [792] "AT1G32120" "AT1G17260" "AT4G25160" "AT2G39570" "AT2G23060" "AT1G32660" "AT1G31480"
## [799] "AT4G15880" "AT4G26620" "AT1G17500" "AT1G50780" "AT1G21150" "AT3G04990" "AT2G22120"
## [806] "AT1G78110" "AT1G80080" "AT3G46840" "AT2G47470" "AT4G02790" "AT4G19410" "AT2G45110"
## [813] "AT1G23260" "AT1G09790" "AT3G58710" "AT5G65100" "AT1G60270" "AT5G57350" "AT5G32613"
## [820] "AT2G03955" "AT1G25400" "AT3G29100" "AT5G49240" "AT2G46890" "AT1G77980" "AT1G43140"
## [827] "AT2G39770" "AT3G58810" "AT1G42470" "AT5G16130" "AT3G05640" "AT4G35520" "AT2G24180"
## [834] "AT4G10790" "AT3G28330" "AT2G29970" "AT1G34170" "AT1G56150" "AT3G24440" "AT3G27500"
## [841] "AT1G75520" "AT1G53890" "AT5G27470" "AT5G03260" "AT5G01370" "AT5G26920" "AT2G40340"
## [848] "AT2G03620" "AT4G37950" "AT5G54750" "AT5G47180" "AT5G04810" "AT5G44000" "AT5G08020"
## [855] "AT5G64570" "AT1G43722" "AT4G36250" "AT1G73370" "AT3G01185" "AT5G42797" "AT5G14060"
## [862] "AT3G61190" "AT5G11480" "AT1G01230" "AT4G14680" "AT2G27930" "AT1G70700" "AT3G15010"
## [869] "AT5G17847" "AT5G05270" "AT2G03230" "AT2G34770" "AT2G01540" "AT1G02380" "AT4G17895"
## [876] "AT1G48870" "AT3G50840" "AT4G35100" "AT3G51171" "AT1G69280" "AT1G36950" "AT4G09090"
## [883] "AT4G33380" "AT3G60100" "AT1G12430" "AT3G17440" "AT3G10350" "AT1G56320" "AT1G50880"
## [890] "AT4G14465" "AT4G22580" "AT1G36310" "AT3G46086" "AT3G17030" "AT1G44830" "AT4G16180"
## [897] "AT4G15396" "AT2G16880" "AT5G45190" "AT5G41120" "AT4G02860" "AT3G12145" "AT5G19940"
## [904] "AT1G01300" "AT2G43790" "AT1G48050" "AT5G66820" "AT5G08240" "AT3G01080" "AT1G36925"
## [911] "AT1G30670" "AT1G22180" "AT3G60190" "AT1G17450" "AT1G61630" "AT5G18260" "AT1G28590"
## [918] "AT5G38450" "AT3G49990" "AT2G33793" "AT5G19380" "AT1G79670" "AT4G14230" "AT3G55580"
## [925] "AT1G68170" "AT5G11660" "AT4G14810" "AT1G60080" "AT5G17860" "AT2G44030" "AT2G45650"
## [932] "AT5G20620" "AT4G38080" "AT4G08980" "AT2G28350" "AT3G03180" "AT1G51240" "AT5G10790"
## [939] "AT5G07070" "AT3G42786" "AT3G25655" "AT1G07130" "AT4G08590" "AT2G44080" "AT2G18400"
## [946] "AT5G40280" "AT3G44718" "AT3G04010" "AT4G15910" "AT5G07380" "AT5G62320" "AT1G42525"
## [953] "AT1G64355" "AT3G02270" "AT1G04820" "AT1G71866" "AT1G33050" "AT3G42770" "AT2G39210"
## [960] "AT5G23950" "AT5G45110" "AT2G47040" "AT3G08650" "AT3G48231" "AT2G28630" "AT2G03290"
## [967] "AT3G61150" "AT1G77810" "AT3G12970" "AT5G52990" "AT5G44330" "AT4G30930" "AT1G16210"
## [974] "AT3G61980" "AT5G08530" "AT2G39320" "AT2G36200" "AT1G34580" "AT5G13970" "AT1G02050"
## [981] "AT1G66500" "AT5G56200" "AT5G24830" "AT4G09110" "ATCG00590" "AT3G15115" "AT5G24530"
## [988] "AT1G04030" "AT5G13360" "AT3G33530" "ATMG01275" "AT4G03070" "AT3G18210" "AT3G01410"
## [995] "AT1G32480" "AT5G01230" "AT5G63080" "AT1G29370" "AT5G10710" "AT3G05720"
## [ reached getOption("max.print") -- omitted 27279 entries ]length(names(descv))## [1] 28279edgeDF <- data.frame(edgeDF, Desc=descv[rownames(edgeDF)], check.names=FALSE)
str(edgeDF)## 'data.frame': 29699 obs. of 46 variables:
## $ M1-A1_logFC : num 0.307 0.198 0.34 0.34 0.669 ...
## $ M1-A1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M1-A1_LR : num 0.5 0.296 0.318 0.96 0.849 ...
## $ M1-A1_PValue : num 0.479 0.587 0.573 0.327 0.357 ...
## $ M1-A1_FDR : num 1 1 1 1 1 ...
## $ M1-V1_logFC : num -0.2241 0.1591 -0.0991 0.3239 0.1076 ...
## $ M1-V1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M1-V1_LR : num 0.2673 0.1909 0.0271 0.8735 0.0228 ...
## $ M1-V1_PValue : num 0.605 0.662 0.869 0.35 0.88 ...
## $ M1-V1_FDR : num 0.968 0.978 0.995 0.909 0.995 ...
## $ A1-V1_logFC : num -0.5312 -0.0391 -0.439 -0.0157 -0.5614 ...
## $ A1-V1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ A1-V1_LR : num 1.49756 0.0116 0.53156 0.00206 0.61461 ...
## $ A1-V1_PValue : num 0.221 0.914 0.466 0.964 0.433 ...
## $ A1-V1_FDR : num 1 1 1 1 1 ...
## $ M6-A6_logFC : num -1.1162 0.0832 -0.1386 -0.1854 -0.2889 ...
## $ M6-A6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M6-A6_LR : num 6.5097 0.053 0.0522 0.2872 0.1771 ...
## $ M6-A6_PValue : num 0.0107 0.8179 0.8192 0.592 0.6739 ...
## $ M6-A6_FDR : num 0.141 0.97 0.97 0.912 0.937 ...
## $ M6-V6_logFC : num -1.284 -0.185 -1.185 -0.68 -0.398 ...
## $ M6-V6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M6-V6_LR : num 8.569 0.266 3.772 3.84 0.343 ...
## $ M6-V6_PValue : num 0.00342 0.6059 0.0521 0.05004 0.55828 ...
## $ M6-V6_FDR : num 0.147 0.986 0.511 0.504 0.981 ...
## $ A6-V6_logFC : num -0.168 -0.269 -1.046 -0.495 -0.109 ...
## $ A6-V6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ A6-V6_LR : num 0.152 0.557 2.959 2.041 0.026 ...
## $ A6-V6_PValue : num 0.6968 0.4554 0.0854 0.1531 0.8719 ...
## $ A6-V6_FDR : num 1 1 0.889 1 1 ...
## $ M12-A12_logFC : num -1.021 -0.247 0.104 -0.251 -0.169 ...
## $ M12-A12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ M12-A12_LR : num 5.4576 0.4582 0.0294 0.525 0.0602 ...
## $ M12-A12_PValue: num 0.0195 0.4985 0.8639 0.4687 0.8062 ...
## $ M12-A12_FDR : num 0.16 0.775 0.954 0.754 0.931 ...
## $ M12-V12_logFC : num -1.728 -0.587 -2.808 -0.283 -0.677 ...
## $ M12-V12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ M12-V12_LR : num 15.1 2.559 19.029 0.668 0.948 ...
## $ M12-V12_PValue: num 1.02e-04 1.10e-01 1.29e-05 4.14e-01 3.30e-01 ...
## $ M12-V12_FDR : num 0.00676 0.49483 0.00136 0.77717 0.72591 ...
## $ A12-V12_logFC : num -0.707 -0.3401 -2.9122 -0.0324 -0.5081 ...
## $ A12-V12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ A12-V12_LR : num 2.66751 0.87762 20.45825 0.00877 0.55889 ...
## $ A12-V12_PValue: num 1.02e-01 3.49e-01 6.09e-06 9.25e-01 4.55e-01 ...
## $ A12-V12_FDR : num 0.74581 0.9398 0.00229 0.99732 0.96621 ...
## $ Desc : Factor w/ 28068 levels "","(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LX13]",..: 14063 1873 4841 7736 13560 23380 12766 27624 NA 22292 ...summary(edgeDF)## M1-A1_logFC M1-A1_logCPM M1-A1_LR M1-A1_PValue M1-A1_FDR
## Min. :-6.009 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.231 1st Qu.: 2.332 1st Qu.: 0.057 1st Qu.:0.355 1st Qu.:1.000
## Median :-0.003 Median : 3.998 Median : 0.267 Median :0.606 Median :1.000
## Mean :-0.023 Mean : 3.879 Mean : 0.740 Mean :0.573 Mean :0.998
## 3rd Qu.: 0.225 3rd Qu.: 5.422 3rd Qu.: 0.857 3rd Qu.:0.811 3rd Qu.:1.000
## Max. : 5.033 Max. :13.741 Max. :33.946 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M1-V1_logFC M1-V1_logCPM M1-V1_LR M1-V1_PValue M1-V1_FDR
## Min. :-7.023 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.323 1st Qu.: 2.332 1st Qu.: 0.113 1st Qu.:0.211 1st Qu.:0.846
## Median :-0.027 Median : 3.998 Median : 0.513 Median :0.474 Median :0.947
## Mean :-0.003 Mean : 3.879 Mean : 1.408 Mean :0.476 Mean :0.861
## 3rd Qu.: 0.312 3rd Qu.: 5.422 3rd Qu.: 1.561 3rd Qu.:0.737 3rd Qu.:0.982
## Max. : 5.482 Max. :13.741 Max. :110.219 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## A1-V1_logFC A1-V1_logCPM A1-V1_LR A1-V1_PValue A1-V1_FDR
## Min. :-6.955 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.265 1st Qu.: 2.332 1st Qu.: 0.079 1st Qu.:0.305 1st Qu.:1.000
## Median :-0.027 Median : 3.998 Median : 0.358 Median :0.550 Median :1.000
## Mean : 0.020 Mean : 3.879 Mean : 0.860 Mean :0.537 Mean :0.996
## 3rd Qu.: 0.257 3rd Qu.: 5.422 3rd Qu.: 1.053 3rd Qu.:0.779 3rd Qu.:1.000
## Max. : 5.968 Max. :13.741 Max. :50.449 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M6-A6_logFC M6-A6_logCPM M6-A6_LR M6-A6_PValue M6-A6_FDR
## Min. :-8.610 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.350 1st Qu.: 2.332 1st Qu.: 0.139 1st Qu.:0.132 1st Qu.:0.529
## Median :-0.014 Median : 3.998 Median : 0.656 Median :0.418 Median :0.836
## Mean :-0.050 Mean : 3.879 Mean : 1.955 Mean :0.434 Mean :0.710
## 3rd Qu.: 0.367 3rd Qu.: 5.422 3rd Qu.: 2.265 3rd Qu.:0.709 3rd Qu.:0.945
## Max. : 6.779 Max. :13.741 Max. :50.140 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M6-V6_logFC M6-V6_logCPM M6-V6_LR M6-V6_PValue M6-V6_FDR
## Min. :-7.404 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.302 1st Qu.: 2.332 1st Qu.: 0.103 1st Qu.:0.208 1st Qu.:0.830
## Median :-0.024 Median : 3.998 Median : 0.489 Median :0.484 Median :0.968
## Mean : 0.004 Mean : 3.879 Mean : 1.418 Mean :0.481 Mean :0.858
## 3rd Qu.: 0.304 3rd Qu.: 5.422 3rd Qu.: 1.588 3rd Qu.:0.748 3rd Qu.:0.997
## Max. : 5.340 Max. :13.741 Max. :57.223 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## A6-V6_logFC A6-V6_logCPM A6-V6_LR A6-V6_PValue A6-V6_FDR
## Min. :-5.366 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.004
## 1st Qu.:-0.259 1st Qu.: 2.332 1st Qu.: 0.081 1st Qu.:0.274 1st Qu.:1.000
## Median :-0.014 Median : 3.998 Median : 0.375 Median :0.540 Median :1.000
## Mean : 0.054 Mean : 3.879 Mean : 1.058 Mean :0.521 Mean :0.959
## 3rd Qu.: 0.277 3rd Qu.: 5.422 3rd Qu.: 1.197 3rd Qu.:0.777 3rd Qu.:1.000
## Max. : 5.813 Max. :13.741 Max. :25.885 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M12-A12_logFC M12-A12_logCPM M12-A12_LR M12-A12_PValue M12-A12_FDR
## Min. :-7.435 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.441 1st Qu.: 2.332 1st Qu.: 0.216 1st Qu.:0.081 1st Qu.:0.324
## Median :-0.015 Median : 3.998 Median : 1.003 Median :0.317 Median :0.633
## Mean :-0.055 Mean : 3.879 Mean : 2.264 Mean :0.378 Mean :0.584
## 3rd Qu.: 0.434 3rd Qu.: 5.422 3rd Qu.: 3.044 3rd Qu.:0.642 3rd Qu.:0.856
## Max. : 5.404 Max. :13.741 Max. :38.611 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M12-V12_logFC M12-V12_logCPM M12-V12_LR M12-V12_PValue M12-V12_FDR
## Min. :-10.254 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.: -0.380 1st Qu.: 2.332 1st Qu.: 0.169 1st Qu.:0.132 1st Qu.:0.527
## Median : -0.001 Median : 3.998 Median : 0.778 Median :0.378 Median :0.755
## Mean : -0.051 Mean : 3.879 Mean : 2.012 Mean :0.416 Mean :0.684
## 3rd Qu.: 0.403 3rd Qu.: 5.422 3rd Qu.: 2.271 3rd Qu.:0.681 3rd Qu.:0.907
## Max. : 6.920 Max. :13.741 Max. :75.477 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## A12-V12_logFC A12-V12_logCPM A12-V12_LR A12-V12_PValue A12-V12_FDR
## Min. :-6.560 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.304 1st Qu.: 2.332 1st Qu.: 0.106 1st Qu.:0.220 1st Qu.:0.879
## Median : 0.002 Median : 3.998 Median : 0.488 Median :0.485 Median :0.968
## Mean : 0.004 Mean : 3.879 Mean : 1.348 Mean :0.484 Mean :0.885
## 3rd Qu.: 0.313 3rd Qu.: 5.422 3rd Qu.: 1.505 3rd Qu.:0.744 3rd Qu.:0.992
## Max. : 6.104 Max. :13.741 Max. :59.975 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## Desc
## : 56
## ECA1 gametogenesis related family protein [Source:UniProtKB/TrEMBL;Acc:A7REH6] : 12
## Cysteine-rich repeat secretory protein 49 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ56]: 7
## 60S ribosomal protein L41 [Source:UniProtKB/Swiss-Prot;Acc:P62120] : 5
## F-box/kelch-repeat protein At1g25211 [Source:UniProtKB/Swiss-Prot;Acc:P0DI06] : 5
## (Other) :28191
## NA's : 1423head(edgeDF)## M1-A1_logFC M1-A1_logCPM M1-A1_LR M1-A1_PValue M1-A1_FDR M1-V1_logFC M1-V1_logCPM
## AT1G01010 0.30718246 5.1056532 0.50036120 0.4793415 1 -0.22406319 5.1056532
## AT1G01020 0.19823761 3.5271659 0.29584192 0.5865010 1 0.15908853 3.5271659
## AT1G01030 0.33993411 3.4304291 0.31752543 0.5730986 1 -0.09909402 3.4304291
## AT1G01040 0.33966327 6.3128157 0.95995765 0.3271975 1 0.32394731 6.3128157
## AT1G01046 0.66893265 0.4467077 0.84911422 0.3568030 1 0.10756440 0.4467077
## AT1G01050 0.06472866 5.5062712 0.03200508 0.8580165 1 -0.25347809 5.5062712
## M1-V1_LR M1-V1_PValue M1-V1_FDR A1-V1_logFC A1-V1_logCPM A1-V1_LR A1-V1_PValue
## AT1G01010 0.26732795 0.6051299 0.9684419 -0.53124565 5.1056532 1.497562503 0.2210468
## AT1G01020 0.19090622 0.6621634 0.9778846 -0.03914907 3.5271659 0.011601322 0.9142262
## AT1G01030 0.02713914 0.8691489 0.9949260 -0.43902813 3.4304291 0.531557865 0.4659526
## AT1G01040 0.87351660 0.3499836 0.9092843 -0.01571597 6.3128157 0.002060839 0.9637913
## AT1G01046 0.02284209 0.8798684 0.9949260 -0.56136825 0.4467077 0.614613916 0.4330559
## AT1G01050 0.49259667 0.4827713 0.9496030 -0.31820675 5.5062712 0.780206909 0.3770779
## A1-V1_FDR M6-A6_logFC M6-A6_logCPM M6-A6_LR M6-A6_PValue M6-A6_FDR M6-V6_logFC
## AT1G01010 1 -1.11622401 5.1056532 6.50969992 0.01072876 0.1412067 -1.2840777
## AT1G01020 1 0.08322345 3.5271659 0.05303064 0.81787123 0.9699191 -0.1853898
## AT1G01030 1 -0.13861045 3.4304291 0.05222713 0.81923225 0.9700061 -1.1845647
## AT1G01040 1 -0.18543721 6.3128157 0.28715847 0.59204723 0.9124516 -0.6801532
## AT1G01046 1 -0.28885132 0.4467077 0.17708467 0.67389069 0.9371147 -0.3976400
## AT1G01050 1 0.26282040 5.5062712 0.54434395 0.46063801 0.8557642 -0.1067200
## M6-V6_logCPM M6-V6_LR M6-V6_PValue M6-V6_FDR A6-V6_logFC A6-V6_logCPM A6-V6_LR
## AT1G01010 5.1056532 8.56948358 0.003418441 0.1474395 -0.1678537 5.1056532 0.15177991
## AT1G01020 3.5271659 0.26619247 0.605897411 0.9858516 -0.2686133 3.5271659 0.55710961
## AT1G01030 3.4304291 3.77249778 0.052101775 0.5114039 -1.0459543 3.4304291 2.95910220
## AT1G01040 6.3128157 3.84013416 0.050039517 0.5039681 -0.4947160 6.3128157 2.04109620
## AT1G01046 0.4467077 0.34269782 0.558276115 0.9807330 -0.1087887 0.4467077 0.02598493
## AT1G01050 5.5062712 0.09018894 0.763937092 0.9973490 -0.3695404 5.5062712 1.07705383
## A6-V6_PValue A6-V6_FDR M12-A12_logFC M12-A12_logCPM M12-A12_LR M12-A12_PValue M12-A12_FDR
## AT1G01010 0.69684018 0.9999641 -1.0212832 5.1056532 5.45764999 0.01948283 0.1604715
## AT1G01020 0.45542718 0.9999641 -0.2467412 3.5271659 0.45819187 0.49847022 0.7746951
## AT1G01030 0.08539535 0.8887613 0.1044802 3.4304291 0.02937847 0.86390808 0.9542807
## AT1G01040 0.15309928 0.9999641 -0.2507635 6.3128157 0.52502887 0.46870436 0.7536237
## AT1G01046 0.87193713 0.9999641 -0.1689051 0.4467077 0.06019614 0.80618621 0.9314756
## AT1G01050 0.29935757 0.9999641 0.5642023 5.5062712 2.50776161 0.11328674 0.3853947
## M12-V12_logFC M12-V12_logCPM M12-V12_LR M12-V12_PValue M12-V12_FDR A12-V12_logFC
## AT1G01010 -1.72829075 5.1056532 15.099803815 1.019739e-04 0.006757093 -0.70700752
## AT1G01020 -0.58680865 3.5271659 2.558583012 1.096969e-01 0.494833581 -0.34006747
## AT1G01030 -2.80767042 3.4304291 19.028722350 1.287656e-05 0.001362354 -2.91215062
## AT1G01040 -0.28314438 6.3128157 0.667657416 4.138695e-01 0.777172248 -0.03238086
## AT1G01046 -0.67700850 0.4467077 0.948126895 3.301965e-01 0.725906011 -0.50810339
## AT1G01050 -0.02808203 5.5062712 0.006246728 9.370038e-01 0.984939219 -0.59228435
## A12-V12_logCPM A12-V12_LR A12-V12_PValue A12-V12_FDR
## AT1G01010 5.1056532 2.667505708 1.024164e-01 0.745808980
## AT1G01020 3.5271659 0.877623597 3.488534e-01 0.939800299
## AT1G01030 3.4304291 20.458248362 6.094633e-06 0.002288475
## AT1G01040 6.3128157 0.008769807 9.253894e-01 0.997321851
## AT1G01046 0.4467077 0.558885055 4.547098e-01 0.966205446
## AT1G01050 5.5062712 2.760447694 9.662119e-02 0.730637995
## Desc
## AT1G01010 NAC domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV96]
## AT1G01020 ARV1 family protein [Source:UniProtKB/TrEMBL;Acc:Q5MK24]
## AT1G01030 B3 domain-containing transcription factor NGA3 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAN1]
## AT1G01040 Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
## AT1G01046 MIR838a; miRNA [Source:TAIR;Acc:AT1G01046]
## AT1G01050 Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]write.table(edgeDF, "./results/edgeRglm_allcomp.xls", quote=FALSE, sep="\t", col.names = NA)6.2 Plot DEG results
Filter and plot DEG results for up and down regulated genes. The definition of up and down is given in the corresponding help file. To open it, type ?filterDEGs in the R console.
edgeDF <- read.delim("results/edgeRglm_allcomp.xls", row.names=1, check.names=FALSE)
str(edgeDF)## 'data.frame': 29699 obs. of 46 variables:
## $ M1-A1_logFC : num 0.307 0.198 0.34 0.34 0.669 ...
## $ M1-A1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M1-A1_LR : num 0.5 0.296 0.318 0.96 0.849 ...
## $ M1-A1_PValue : num 0.479 0.587 0.573 0.327 0.357 ...
## $ M1-A1_FDR : num 1 1 1 1 1 ...
## $ M1-V1_logFC : num -0.2241 0.1591 -0.0991 0.3239 0.1076 ...
## $ M1-V1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M1-V1_LR : num 0.2673 0.1909 0.0271 0.8735 0.0228 ...
## $ M1-V1_PValue : num 0.605 0.662 0.869 0.35 0.88 ...
## $ M1-V1_FDR : num 0.968 0.978 0.995 0.909 0.995 ...
## $ A1-V1_logFC : num -0.5312 -0.0391 -0.439 -0.0157 -0.5614 ...
## $ A1-V1_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ A1-V1_LR : num 1.49756 0.0116 0.53156 0.00206 0.61461 ...
## $ A1-V1_PValue : num 0.221 0.914 0.466 0.964 0.433 ...
## $ A1-V1_FDR : num 1 1 1 1 1 ...
## $ M6-A6_logFC : num -1.1162 0.0832 -0.1386 -0.1854 -0.2889 ...
## $ M6-A6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M6-A6_LR : num 6.5097 0.053 0.0522 0.2872 0.1771 ...
## $ M6-A6_PValue : num 0.0107 0.8179 0.8192 0.592 0.6739 ...
## $ M6-A6_FDR : num 0.141 0.97 0.97 0.912 0.937 ...
## $ M6-V6_logFC : num -1.284 -0.185 -1.185 -0.68 -0.398 ...
## $ M6-V6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ M6-V6_LR : num 8.569 0.266 3.772 3.84 0.343 ...
## $ M6-V6_PValue : num 0.00342 0.6059 0.0521 0.05004 0.55828 ...
## $ M6-V6_FDR : num 0.147 0.986 0.511 0.504 0.981 ...
## $ A6-V6_logFC : num -0.168 -0.269 -1.046 -0.495 -0.109 ...
## $ A6-V6_logCPM : num 5.106 3.527 3.43 6.313 0.447 ...
## $ A6-V6_LR : num 0.152 0.557 2.959 2.041 0.026 ...
## $ A6-V6_PValue : num 0.6968 0.4554 0.0854 0.1531 0.8719 ...
## $ A6-V6_FDR : num 1 1 0.889 1 1 ...
## $ M12-A12_logFC : num -1.021 -0.247 0.104 -0.251 -0.169 ...
## $ M12-A12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ M12-A12_LR : num 5.4576 0.4582 0.0294 0.525 0.0602 ...
## $ M12-A12_PValue: num 0.0195 0.4985 0.8639 0.4687 0.8062 ...
## $ M12-A12_FDR : num 0.16 0.775 0.954 0.754 0.931 ...
## $ M12-V12_logFC : num -1.728 -0.587 -2.808 -0.283 -0.677 ...
## $ M12-V12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ M12-V12_LR : num 15.1 2.559 19.029 0.668 0.948 ...
## $ M12-V12_PValue: num 1.02e-04 1.10e-01 1.29e-05 4.14e-01 3.30e-01 ...
## $ M12-V12_FDR : num 0.00676 0.49483 0.00136 0.77717 0.72591 ...
## $ A12-V12_logFC : num -0.707 -0.3401 -2.9122 -0.0324 -0.5081 ...
## $ A12-V12_logCPM: num 5.106 3.527 3.43 6.313 0.447 ...
## $ A12-V12_LR : num 2.66751 0.87762 20.45825 0.00877 0.55889 ...
## $ A12-V12_PValue: num 1.02e-01 3.49e-01 6.09e-06 9.25e-01 4.55e-01 ...
## $ A12-V12_FDR : num 0.74581 0.9398 0.00229 0.99732 0.96621 ...
## $ Desc : Factor w/ 28068 levels "","(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LX13]",..: 14063 1873 4841 7736 13560 23380 12766 27624 NA 22292 ...summary(edgeDF)## M1-A1_logFC M1-A1_logCPM M1-A1_LR M1-A1_PValue M1-A1_FDR
## Min. :-6.009 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.231 1st Qu.: 2.332 1st Qu.: 0.057 1st Qu.:0.355 1st Qu.:1.000
## Median :-0.003 Median : 3.998 Median : 0.267 Median :0.606 Median :1.000
## Mean :-0.023 Mean : 3.879 Mean : 0.740 Mean :0.573 Mean :0.998
## 3rd Qu.: 0.225 3rd Qu.: 5.422 3rd Qu.: 0.857 3rd Qu.:0.811 3rd Qu.:1.000
## Max. : 5.033 Max. :13.741 Max. :33.946 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M1-V1_logFC M1-V1_logCPM M1-V1_LR M1-V1_PValue M1-V1_FDR
## Min. :-7.023 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.323 1st Qu.: 2.332 1st Qu.: 0.113 1st Qu.:0.211 1st Qu.:0.846
## Median :-0.027 Median : 3.998 Median : 0.513 Median :0.474 Median :0.947
## Mean :-0.003 Mean : 3.879 Mean : 1.408 Mean :0.476 Mean :0.861
## 3rd Qu.: 0.312 3rd Qu.: 5.422 3rd Qu.: 1.561 3rd Qu.:0.737 3rd Qu.:0.982
## Max. : 5.482 Max. :13.741 Max. :110.219 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## A1-V1_logFC A1-V1_logCPM A1-V1_LR A1-V1_PValue A1-V1_FDR
## Min. :-6.955 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.265 1st Qu.: 2.332 1st Qu.: 0.079 1st Qu.:0.305 1st Qu.:1.000
## Median :-0.027 Median : 3.998 Median : 0.358 Median :0.550 Median :1.000
## Mean : 0.020 Mean : 3.879 Mean : 0.860 Mean :0.537 Mean :0.996
## 3rd Qu.: 0.257 3rd Qu.: 5.422 3rd Qu.: 1.053 3rd Qu.:0.779 3rd Qu.:1.000
## Max. : 5.968 Max. :13.741 Max. :50.449 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M6-A6_logFC M6-A6_logCPM M6-A6_LR M6-A6_PValue M6-A6_FDR
## Min. :-8.610 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.350 1st Qu.: 2.332 1st Qu.: 0.139 1st Qu.:0.132 1st Qu.:0.529
## Median :-0.014 Median : 3.998 Median : 0.656 Median :0.418 Median :0.836
## Mean :-0.050 Mean : 3.879 Mean : 1.955 Mean :0.434 Mean :0.710
## 3rd Qu.: 0.367 3rd Qu.: 5.422 3rd Qu.: 2.265 3rd Qu.:0.709 3rd Qu.:0.945
## Max. : 6.779 Max. :13.741 Max. :50.140 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M6-V6_logFC M6-V6_logCPM M6-V6_LR M6-V6_PValue M6-V6_FDR
## Min. :-7.404 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.302 1st Qu.: 2.332 1st Qu.: 0.103 1st Qu.:0.208 1st Qu.:0.830
## Median :-0.024 Median : 3.998 Median : 0.489 Median :0.484 Median :0.968
## Mean : 0.004 Mean : 3.879 Mean : 1.418 Mean :0.481 Mean :0.858
## 3rd Qu.: 0.304 3rd Qu.: 5.422 3rd Qu.: 1.588 3rd Qu.:0.748 3rd Qu.:0.997
## Max. : 5.340 Max. :13.741 Max. :57.223 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## A6-V6_logFC A6-V6_logCPM A6-V6_LR A6-V6_PValue A6-V6_FDR
## Min. :-5.366 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.004
## 1st Qu.:-0.259 1st Qu.: 2.332 1st Qu.: 0.081 1st Qu.:0.274 1st Qu.:1.000
## Median :-0.014 Median : 3.998 Median : 0.375 Median :0.540 Median :1.000
## Mean : 0.054 Mean : 3.879 Mean : 1.058 Mean :0.521 Mean :0.959
## 3rd Qu.: 0.277 3rd Qu.: 5.422 3rd Qu.: 1.197 3rd Qu.:0.777 3rd Qu.:1.000
## Max. : 5.813 Max. :13.741 Max. :25.885 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M12-A12_logFC M12-A12_logCPM M12-A12_LR M12-A12_PValue M12-A12_FDR
## Min. :-7.435 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.441 1st Qu.: 2.332 1st Qu.: 0.216 1st Qu.:0.081 1st Qu.:0.324
## Median :-0.015 Median : 3.998 Median : 1.003 Median :0.317 Median :0.633
## Mean :-0.055 Mean : 3.879 Mean : 2.264 Mean :0.378 Mean :0.584
## 3rd Qu.: 0.434 3rd Qu.: 5.422 3rd Qu.: 3.044 3rd Qu.:0.642 3rd Qu.:0.856
## Max. : 5.404 Max. :13.741 Max. :38.611 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## M12-V12_logFC M12-V12_logCPM M12-V12_LR M12-V12_PValue M12-V12_FDR
## Min. :-10.254 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.: -0.380 1st Qu.: 2.332 1st Qu.: 0.169 1st Qu.:0.132 1st Qu.:0.527
## Median : -0.001 Median : 3.998 Median : 0.778 Median :0.378 Median :0.755
## Mean : -0.051 Mean : 3.879 Mean : 2.012 Mean :0.416 Mean :0.684
## 3rd Qu.: 0.403 3rd Qu.: 5.422 3rd Qu.: 2.271 3rd Qu.:0.681 3rd Qu.:0.907
## Max. : 6.920 Max. :13.741 Max. :75.477 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## A12-V12_logFC A12-V12_logCPM A12-V12_LR A12-V12_PValue A12-V12_FDR
## Min. :-6.560 Min. :-1.854 Min. : 0.000 Min. :0.000 Min. :0.000
## 1st Qu.:-0.304 1st Qu.: 2.332 1st Qu.: 0.106 1st Qu.:0.220 1st Qu.:0.879
## Median : 0.002 Median : 3.998 Median : 0.488 Median :0.485 Median :0.968
## Mean : 0.004 Mean : 3.879 Mean : 1.348 Mean :0.484 Mean :0.885
## 3rd Qu.: 0.313 3rd Qu.: 5.422 3rd Qu.: 1.505 3rd Qu.:0.744 3rd Qu.:0.992
## Max. : 6.104 Max. :13.741 Max. :59.975 Max. :1.000 Max. :1.000
## NA's :10549 NA's :10549 NA's :10549 NA's :10549 NA's :10549
## Desc
## : 56
## ECA1 gametogenesis related family protein [Source:UniProtKB/TrEMBL;Acc:A7REH6] : 12
## Cysteine-rich repeat secretory protein 49 [Source:UniProtKB/Swiss-Prot;Acc:P0CJ56]: 7
## 60S ribosomal protein L41 [Source:UniProtKB/Swiss-Prot;Acc:P62120] : 5
## F-box/kelch-repeat protein At1g25211 [Source:UniProtKB/Swiss-Prot;Acc:P0DI06] : 5
## (Other) :28191
## NA's : 1423head(edgeDF)## M1-A1_logFC M1-A1_logCPM M1-A1_LR M1-A1_PValue M1-A1_FDR M1-V1_logFC M1-V1_logCPM
## AT1G01010 0.30718246 5.1056532 0.50036120 0.4793415 1 -0.22406319 5.1056532
## AT1G01020 0.19823761 3.5271659 0.29584192 0.5865010 1 0.15908853 3.5271659
## AT1G01030 0.33993411 3.4304291 0.31752543 0.5730986 1 -0.09909402 3.4304291
## AT1G01040 0.33966327 6.3128157 0.95995765 0.3271975 1 0.32394731 6.3128157
## AT1G01046 0.66893265 0.4467077 0.84911422 0.3568030 1 0.10756440 0.4467077
## AT1G01050 0.06472866 5.5062712 0.03200508 0.8580165 1 -0.25347809 5.5062712
## M1-V1_LR M1-V1_PValue M1-V1_FDR A1-V1_logFC A1-V1_logCPM A1-V1_LR A1-V1_PValue
## AT1G01010 0.26732795 0.6051299 0.9684419 -0.53124565 5.1056532 1.497562503 0.2210468
## AT1G01020 0.19090622 0.6621634 0.9778846 -0.03914907 3.5271659 0.011601322 0.9142262
## AT1G01030 0.02713914 0.8691489 0.9949260 -0.43902813 3.4304291 0.531557865 0.4659526
## AT1G01040 0.87351660 0.3499836 0.9092843 -0.01571597 6.3128157 0.002060839 0.9637913
## AT1G01046 0.02284209 0.8798684 0.9949260 -0.56136825 0.4467077 0.614613916 0.4330559
## AT1G01050 0.49259667 0.4827713 0.9496030 -0.31820675 5.5062712 0.780206909 0.3770779
## A1-V1_FDR M6-A6_logFC M6-A6_logCPM M6-A6_LR M6-A6_PValue M6-A6_FDR M6-V6_logFC
## AT1G01010 1 -1.11622401 5.1056532 6.50969992 0.01072876 0.1412067 -1.2840777
## AT1G01020 1 0.08322345 3.5271659 0.05303064 0.81787123 0.9699191 -0.1853898
## AT1G01030 1 -0.13861045 3.4304291 0.05222713 0.81923225 0.9700061 -1.1845647
## AT1G01040 1 -0.18543721 6.3128157 0.28715847 0.59204723 0.9124516 -0.6801532
## AT1G01046 1 -0.28885132 0.4467077 0.17708467 0.67389069 0.9371147 -0.3976400
## AT1G01050 1 0.26282040 5.5062712 0.54434395 0.46063801 0.8557642 -0.1067200
## M6-V6_logCPM M6-V6_LR M6-V6_PValue M6-V6_FDR A6-V6_logFC A6-V6_logCPM A6-V6_LR
## AT1G01010 5.1056532 8.56948358 0.003418441 0.1474395 -0.1678537 5.1056532 0.15177991
## AT1G01020 3.5271659 0.26619247 0.605897411 0.9858516 -0.2686133 3.5271659 0.55710961
## AT1G01030 3.4304291 3.77249778 0.052101775 0.5114039 -1.0459543 3.4304291 2.95910220
## AT1G01040 6.3128157 3.84013416 0.050039517 0.5039681 -0.4947160 6.3128157 2.04109620
## AT1G01046 0.4467077 0.34269782 0.558276115 0.9807330 -0.1087887 0.4467077 0.02598493
## AT1G01050 5.5062712 0.09018894 0.763937092 0.9973490 -0.3695404 5.5062712 1.07705383
## A6-V6_PValue A6-V6_FDR M12-A12_logFC M12-A12_logCPM M12-A12_LR M12-A12_PValue M12-A12_FDR
## AT1G01010 0.69684018 0.9999641 -1.0212832 5.1056532 5.45764999 0.01948283 0.1604715
## AT1G01020 0.45542718 0.9999641 -0.2467412 3.5271659 0.45819187 0.49847022 0.7746951
## AT1G01030 0.08539535 0.8887613 0.1044802 3.4304291 0.02937847 0.86390808 0.9542807
## AT1G01040 0.15309928 0.9999641 -0.2507635 6.3128157 0.52502887 0.46870436 0.7536237
## AT1G01046 0.87193713 0.9999641 -0.1689051 0.4467077 0.06019614 0.80618621 0.9314756
## AT1G01050 0.29935757 0.9999641 0.5642023 5.5062712 2.50776161 0.11328674 0.3853947
## M12-V12_logFC M12-V12_logCPM M12-V12_LR M12-V12_PValue M12-V12_FDR A12-V12_logFC
## AT1G01010 -1.72829075 5.1056532 15.099803815 1.019739e-04 0.006757093 -0.70700752
## AT1G01020 -0.58680865 3.5271659 2.558583012 1.096969e-01 0.494833581 -0.34006747
## AT1G01030 -2.80767042 3.4304291 19.028722350 1.287656e-05 0.001362354 -2.91215062
## AT1G01040 -0.28314438 6.3128157 0.667657416 4.138695e-01 0.777172248 -0.03238086
## AT1G01046 -0.67700850 0.4467077 0.948126895 3.301965e-01 0.725906011 -0.50810339
## AT1G01050 -0.02808203 5.5062712 0.006246728 9.370038e-01 0.984939219 -0.59228435
## A12-V12_logCPM A12-V12_LR A12-V12_PValue A12-V12_FDR
## AT1G01010 5.1056532 2.667505708 1.024164e-01 0.745808980
## AT1G01020 3.5271659 0.877623597 3.488534e-01 0.939800299
## AT1G01030 3.4304291 20.458248362 6.094633e-06 0.002288475
## AT1G01040 6.3128157 0.008769807 9.253894e-01 0.997321851
## AT1G01046 0.4467077 0.558885055 4.547098e-01 0.966205446
## AT1G01050 5.5062712 2.760447694 9.662119e-02 0.730637995
## Desc
## AT1G01010 NAC domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q0WV96]
## AT1G01020 ARV1 family protein [Source:UniProtKB/TrEMBL;Acc:Q5MK24]
## AT1G01030 B3 domain-containing transcription factor NGA3 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAN1]
## AT1G01040 Dicer-like 1 [Source:UniProtKB/TrEMBL;Acc:F4HQG6]
## AT1G01046 MIR838a; miRNA [Source:TAIR;Acc:AT1G01046]
## AT1G01050 Soluble inorganic pyrophosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V56]pdf("results/DEGcounts.pdf")
DEG_list <- systemPipeR::filterDEGs(degDF=edgeDF, filter=c(Fold=2, FDR=20))
# finally a DEG list
str(DEG_list)## List of 4
## $ UporDown:List of 9
## ..$ M1-A1 : chr [1:13] "AT1G07050" "AT1G16090" "AT1G68050" "AT2G17740" ...
## ..$ M1-V1 : chr [1:521] "AT1G01060" "AT1G02710" "AT1G02820" "AT1G02920" ...
## ..$ A1-V1 : chr [1:15] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G64500" ...
## ..$ M6-A6 : chr [1:1622] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01390" ...
## ..$ M6-V6 : chr [1:618] "AT1G01010" "AT1G01390" "AT1G01680" "AT1G02520" ...
## ..$ A6-V6 : chr [1:101] "AT1G02220" "AT1G02270" "AT1G02390" "AT1G05020" ...
## ..$ M12-A12: chr [1:2226] "AT1G01010" "AT1G01120" "AT1G01190" "AT1G01300" ...
## ..$ M12-V12: chr [1:1352] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01430" ...
## ..$ A12-V12: chr [1:499] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" ...
## $ Up :List of 9
## ..$ M1-A1 : chr [1:2] "AT3G21870" "ATCG01310"
## ..$ M1-V1 : chr [1:292] "AT1G01060" "AT1G02710" "AT1G02820" "AT1G03055" ...
## ..$ A1-V1 : chr [1:3] "AT1G64500" "AT2G24762" "AT3G09600"
## ..$ M6-A6 : chr [1:650] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02610" ...
## ..$ M6-V6 : chr [1:364] "AT1G01390" "AT1G03130" "AT1G03630" "AT1G05675" ...
## ..$ A6-V6 : chr [1:78] "AT1G02220" "AT1G02270" "AT1G02390" "AT1G05020" ...
## ..$ M12-A12: chr [1:943] "AT1G01120" "AT1G01190" "AT1G01300" "AT1G01430" ...
## ..$ M12-V12: chr [1:356] "AT1G01430" "AT1G02650" "AT1G03130" "AT1G03300" ...
## ..$ A12-V12: chr [1:139] "AT1G02220" "AT1G02310" "AT1G02470" "AT1G02920" ...
## $ Down :List of 9
## ..$ M1-A1 : chr [1:11] "AT1G07050" "AT1G16090" "AT1G68050" "AT2G17740" ...
## ..$ M1-V1 : chr [1:229] "AT1G02920" "AT1G02930" "AT1G04280" "AT1G04620" ...
## ..$ A1-V1 : chr [1:12] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" ...
## ..$ M6-A6 : chr [1:972] "AT1G01010" "AT1G01340" "AT1G01480" "AT1G01560" ...
## ..$ M6-V6 : chr [1:254] "AT1G01010" "AT1G01680" "AT1G02520" "AT1G04490" ...
## ..$ A6-V6 : chr [1:23] "AT1G16400" "AT1G34210" "AT1G49530" "AT1G54095" ...
## ..$ M12-A12: chr [1:1283] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" ...
## ..$ M12-V12: chr [1:996] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" ...
## ..$ A12-V12: chr [1:360] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" ...
## $ Summary :'data.frame': 9 obs. of 4 variables:
## ..$ Comparisons : Factor w/ 9 levels "A1-V1","A12-V12",..: 4 5 1 8 9 3 6 7 2
## ..$ Counts_Up_or_Down: int [1:9] 13 521 15 1622 618 101 2226 1352 499
## ..$ Counts_Up : int [1:9] 2 292 3 650 364 78 943 356 139
## ..$ Counts_Down : int [1:9] 11 229 12 972 254 23 1283 996 360DEG_list## $UporDown
## $UporDown$`M1-A1`
## [1] "AT1G07050" "AT1G16090" "AT1G68050" "AT2G17740" "AT2G19450" "AT3G21870" "AT4G12480" "AT4G33980"
## [9] "AT5G40760" "AT5G42900" "AT5G48250" "AT5G60100" "ATCG01310"
##
## $UporDown$`M1-V1`
## [1] "AT1G01060" "AT1G02710" "AT1G02820" "AT1G02920" "AT1G02930" "AT1G03055" "AT1G03360"
## [8] "AT1G04250" "AT1G04280" "AT1G04530" "AT1G04550" "AT1G04620" "AT1G04770" "AT1G04990"
## [15] "AT1G05300" "AT1G05710" "AT1G06460" "AT1G07010" "AT1G07040" "AT1G07050" "AT1G07160"
## [22] "AT1G07180" "AT1G07420" "AT1G09180" "AT1G09900" "AT1G10200" "AT1G10960" "AT1G10990"
## [29] "AT1G11200" "AT1G11925" "AT1G11950" "AT1G12710" "AT1G13030" "AT1G13270" "AT1G13800"
## [36] "AT1G14150" "AT1G14170" "AT1G14540" "AT1G14840" "AT1G15290" "AT1G15510" "AT1G15670"
## [43] "AT1G16090" "AT1G16350" "AT1G16730" "AT1G17050" "AT1G17665" "AT1G18800" "AT1G19130"
## [50] "AT1G19140" "AT1G19370" "AT1G20010" "AT1G20630" "AT1G21110" "AT1G21120" "AT1G21130"
## [57] "AT1G21500" "AT1G22850" "AT1G23100" "AT1G23740" "AT1G24148" "AT1G25320" "AT1G26220"
## [64] "AT1G26380" "AT1G26420" "AT1G26665" "AT1G26761" "AT1G27020" "AT1G27480" "AT1G27630"
## [71] "AT1G28010" "AT1G28330" "AT1G29160" "AT1G29600" "AT1G31690" "AT1G31920" "AT1G32440"
## [78] "AT1G32760" "AT1G33030" "AT1G33410" "AT1G42550" "AT1G44000" "AT1G44446" "AT1G48100"
## [85] "AT1G48200" "AT1G48210" "AT1G48570" "AT1G49490" "AT1G50840" "AT1G51310" "AT1G51610"
## [92] "AT1G51920" "AT1G52200" "AT1G52830" "AT1G53035" "AT1G53100" "AT1G55260" "AT1G55960"
## [99] "AT1G56140" "AT1G56145" "AT1G56300" "AT1G56470" "AT1G58520" "AT1G60730" "AT1G61560"
## [106] "AT1G62170" "AT1G62180" "AT1G62630" "AT1G62750" "AT1G62760" "AT1G63180" "AT1G64500"
## [113] "AT1G64600" "AT1G64670" "AT1G64770" "AT1G64880" "AT1G64900" "AT1G64970" "AT1G65490"
## [120] "AT1G66130" "AT1G66540" "AT1G66700" "AT1G66780" "AT1G67590" "AT1G67970" "AT1G67980"
## [127] "AT1G68050" "AT1G68440" "AT1G69200" "AT1G70000" "AT1G70580" "AT1G70800" "AT1G71000"
## [134] "AT1G72040" "AT1G72330" "AT1G72645" "AT1G73870" "AT1G74070" "AT1G75100" "AT1G75280"
## [141] "AT1G76240" "AT1G76790" "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G79440"
## [148] "AT2G02010" "AT2G02930" "AT2G04030" "AT2G04039" "AT2G05630" "AT2G11890" "AT2G14170"
## [155] "AT2G15020" "AT2G15890" "AT2G17740" "AT2G17972" "AT2G18330" "AT2G18560" "AT2G19190"
## [162] "AT2G19450" "AT2G19670" "AT2G20020" "AT2G21130" "AT2G21320" "AT2G21330" "AT2G21660"
## [169] "AT2G22450" "AT2G23110" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24540" "AT2G24545"
## [176] "AT2G24570" "AT2G24580" "AT2G24762" "AT2G25680" "AT2G25730" "AT2G25930" "AT2G26080"
## [183] "AT2G26560" "AT2G26650" "AT2G27200" "AT2G29720" "AT2G30100" "AT2G30150" "AT2G30750"
## [190] "AT2G30770" "AT2G31380" "AT2G31750" "AT2G32530" "AT2G32540" "AT2G33830" "AT2G33855"
## [197] "AT2G35950" "AT2G35980" "AT2G36390" "AT2G37630" "AT2G37940" "AT2G37970" "AT2G38465"
## [204] "AT2G38750" "AT2G39380" "AT2G39400" "AT2G39660" "AT2G39900" "AT2G39920" "AT2G40080"
## [211] "AT2G40110" "AT2G40340" "AT2G41250" "AT2G41290" "AT2G42710" "AT2G42975" "AT2G43100"
## [218] "AT2G43620" "AT2G43650" "AT2G44080" "AT2G46790" "AT2G46830" "AT2G47370" "AT2G47390"
## [225] "AT2G47450" "AT2G47485" "AT3G01060" "AT3G01180" "AT3G06145" "AT3G06520" "AT3G07310"
## [232] "AT3G07640" "AT3G07650" "AT3G07770" "AT3G09390" "AT3G09405" "AT3G09600" "AT3G09650"
## [239] "AT3G10040" "AT3G10410" "AT3G11090" "AT3G11110" "AT3G11230" "AT3G12030" "AT3G13470"
## [246] "AT3G14900" "AT3G15354" "AT3G16180" "AT3G16520" "AT3G16530" "AT3G17170" "AT3G17640"
## [253] "AT3G18750" "AT3G19210" "AT3G19260" "AT3G19450" "AT3G19480" "AT3G20410" "AT3G21890"
## [260] "AT3G22121" "AT3G22150" "AT3G23280" "AT3G24170" "AT3G24190" "AT3G24460" "AT3G26570"
## [267] "AT3G26670" "AT3G26740" "AT3G26830" "AT3G27300" "AT3G27350" "AT3G28040" "AT3G28370"
## [274] "AT3G43670" "AT3G43960" "AT3G45060" "AT3G46440" "AT3G46640" "AT3G47070" "AT3G47420"
## [281] "AT3G47430" "AT3G47860" "AT3G48280" "AT3G49110" "AT3G49240" "AT3G49470" "AT3G50210"
## [288] "AT3G50500" "AT3G50685" "AT3G51330" "AT3G51750" "AT3G51895" "AT3G52720" "AT3G53830"
## [295] "AT3G54150" "AT3G54490" "AT3G54500" "AT3G54720" "AT3G55450" "AT3G56290" "AT3G56500"
## [302] "AT3G57020" "AT3G57180" "AT3G57190" "AT3G57550" "AT3G58570" "AT3G58990" "AT3G59250"
## [309] "AT3G59350" "AT3G59400" "AT3G61160" "AT3G61220" "AT3G61780" "AT3G63200" "AT3G63380"
## [316] "AT4G00050" "AT4G01037" "AT4G01130" "AT4G01250" "AT4G02380" "AT4G02520" "AT4G02990"
## [323] "AT4G03460" "AT4G04330" "AT4G09020" "AT4G09350" "AT4G10120" "AT4G10620" "AT4G11100"
## [330] "AT4G11175" "AT4G11600" "AT4G12390" "AT4G12480" "AT4G12830" "AT4G14690" "AT4G15233"
## [337] "AT4G15248" "AT4G15810" "AT4G16146" "AT4G16400" "AT4G16410" "AT4G16820" "AT4G17140"
## [344] "AT4G18540" "AT4G18800" "AT4G19170" "AT4G19410" "AT4G19810" "AT4G21880" "AT4G22770"
## [351] "AT4G23280" "AT4G23550" "AT4G23680" "AT4G24700" "AT4G25290" "AT4G25780" "AT4G25900"
## [358] "AT4G26270" "AT4G26600" "AT4G26670" "AT4G26850" "AT4G27030" "AT4G27130" "AT4G27970"
## [365] "AT4G28550" "AT4G28730" "AT4G28740" "AT4G28780" "AT4G30470" "AT4G30610" "AT4G31210"
## [372] "AT4G31390" "AT4G32770" "AT4G33980" "AT4G33985" "AT4G34550" "AT4G34610" "AT4G34770"
## [379] "AT4G34900" "AT4G35090" "AT4G36760" "AT4G36770" "AT4G36950" "AT4G37650" "AT4G37800"
## [386] "AT4G37925" "AT4G38060" "AT4G38540" "AT4G38545" "AT4G39230" "AT4G39270" "AT4G39470"
## [393] "AT5G01015" "AT5G01410" "AT5G02260" "AT5G02540" "AT5G02830" "AT5G03460" "AT5G03555"
## [400] "AT5G05580" "AT5G06690" "AT5G06790" "AT5G08380" "AT5G08610" "AT5G08720" "AT5G08760"
## [407] "AT5G09760" "AT5G10470" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G12080" "AT5G12110"
## [414] "AT5G12930" "AT5G15600" "AT5G15640" "AT5G17170" "AT5G17300" "AT5G18470" "AT5G18525"
## [421] "AT5G18540" "AT5G18670" "AT5G19730" "AT5G19850" "AT5G20220" "AT5G20380" "AT5G20950"
## [428] "AT5G21100" "AT5G22390" "AT5G23235" "AT5G23240" "AT5G23575" "AT5G23730" "AT5G23750"
## [435] "AT5G23760" "AT5G24120" "AT5G24150" "AT5G24280" "AT5G24380" "AT5G24470" "AT5G24850"
## [442] "AT5G25630" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G28500" "AT5G34780" "AT5G37740"
## [449] "AT5G38430" "AT5G38895" "AT5G39410" "AT5G39580" "AT5G39710" "AT5G40240" "AT5G40760"
## [456] "AT5G41260" "AT5G42900" "AT5G43630" "AT5G43850" "AT5G44010" "AT5G44190" "AT5G45800"
## [463] "AT5G46050" "AT5G46580" "AT5G46860" "AT5G46871" "AT5G48030" "AT5G48250" "AT5G48430"
## [470] "AT5G49740" "AT5G49900" "AT5G50100" "AT5G50200" "AT5G51570" "AT5G51720" "AT5G51790"
## [477] "AT5G52570" "AT5G53200" "AT5G54130" "AT5G54610" "AT5G54930" "AT5G54960" "AT5G55570"
## [484] "AT5G55740" "AT5G55790" "AT5G56850" "AT5G57110" "AT5G57220" "AT5G58600" "AT5G58660"
## [491] "AT5G58770" "AT5G58870" "AT5G59570" "AT5G59780" "AT5G60100" "AT5G61030" "AT5G61130"
## [498] "AT5G61350" "AT5G61380" "AT5G61520" "AT5G61560" "AT5G61670" "AT5G62140" "AT5G62900"
## [505] "AT5G63630" "AT5G63700" "AT5G63810" "AT5G64840" "AT5G64860" "AT5G64940" "AT5G65380"
## [512] "AT5G65600" "AT5G66052" "AT5G66053" "AT5G66740" "AT5G66960" "AT5G67370" "ATCG00930"
## [519] "ATCG00940" "ATCG01300" "ATCG01310"
##
## $UporDown$`A1-V1`
## [1] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G64500" "AT1G68050" "AT2G24762" "AT2G25730" "AT2G40080"
## [9] "AT3G07650" "AT3G09600" "AT4G33980" "AT5G42900" "AT5G48250" "AT5G59570" "AT5G60100"
##
## $UporDown$`M6-A6`
## [1] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01390" "AT1G01430" "AT1G01480" "AT1G01560"
## [8] "AT1G01660" "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02270" "AT1G02310" "AT1G02390"
## [15] "AT1G02450" "AT1G02470" "AT1G02500" "AT1G02520" "AT1G02610" "AT1G02740" "AT1G02850"
## [22] "AT1G02920" "AT1G03020" "AT1G03050" "AT1G03130" "AT1G03495" "AT1G03610" "AT1G03630"
## [29] "AT1G03660" "AT1G03940" "AT1G04490" "AT1G04770" "AT1G04870" "AT1G05020" "AT1G05100"
## [36] "AT1G05170" "AT1G05340" "AT1G05880" "AT1G06040" "AT1G06148" "AT1G06180" "AT1G06360"
## [43] "AT1G06460" "AT1G06620" "AT1G07000" "AT1G07050" "AT1G07280" "AT1G07440" "AT1G07500"
## [50] "AT1G07620" "AT1G08050" "AT1G08550" "AT1G08860" "AT1G09310" "AT1G09932" "AT1G10020"
## [57] "AT1G10040" "AT1G10150" "AT1G10280" "AT1G10340" "AT1G10657" "AT1G10760" "AT1G10960"
## [64] "AT1G11180" "AT1G11260" "AT1G11330" "AT1G11362" "AT1G11905" "AT1G12090" "AT1G12160"
## [71] "AT1G12200" "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12450" "AT1G12500" "AT1G12710"
## [78] "AT1G12730" "AT1G13245" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13470" "AT1G13520"
## [85] "AT1G13540" "AT1G13550" "AT1G13650" "AT1G13700" "AT1G13930" "AT1G14030" "AT1G14150"
## [92] "AT1G14345" "AT1G14480" "AT1G14700" "AT1G14720" "AT1G14870" "AT1G15160" "AT1G15290"
## [99] "AT1G15520" "AT1G15790" "AT1G15820" "AT1G15980" "AT1G16080" "AT1G16300" "AT1G16400"
## [106] "AT1G16410" "AT1G16420" "AT1G16670" "AT1G16720" "AT1G17100" "AT1G17340" "AT1G17380"
## [113] "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17744" "AT1G17750" "AT1G17830" "AT1G17850"
## [120] "AT1G17970" "AT1G18000" "AT1G18010" "AT1G18265" "AT1G18330" "AT1G18570" "AT1G18890"
## [127] "AT1G19020" "AT1G19150" "AT1G19250" "AT1G19510" "AT1G19715" "AT1G19720" "AT1G20020"
## [134] "AT1G20030" "AT1G20310" "AT1G20460" "AT1G21240" "AT1G21370" "AT1G21390" "AT1G21520"
## [141] "AT1G21525" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22190" "AT1G22220" "AT1G22360"
## [148] "AT1G22370" "AT1G22380" "AT1G22400" "AT1G22403" "AT1G22490" "AT1G22530" "AT1G22550"
## [155] "AT1G22570" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23050" "AT1G23052"
## [162] "AT1G23200" "AT1G23205" "AT1G23390" "AT1G23400" "AT1G23740" "AT1G23840" "AT1G23850"
## [169] "AT1G24140" "AT1G24145" "AT1G25220" "AT1G25370" "AT1G25400" "AT1G25450" "AT1G26130"
## [176] "AT1G26230" "AT1G26390" "AT1G26761" "AT1G26800" "AT1G27480" "AT1G27770" "AT1G27950"
## [183] "AT1G28010" "AT1G28480" "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29530"
## [190] "AT1G29640" "AT1G29670" "AT1G30040" "AT1G30100" "AT1G30190" "AT1G30270" "AT1G30420"
## [197] "AT1G30520" "AT1G30620" "AT1G30850" "AT1G30900" "AT1G31173" "AT1G31290" "AT1G32060"
## [204] "AT1G32080" "AT1G32330" "AT1G32870" "AT1G32940" "AT1G32960" "AT1G33030" "AT1G33170"
## [211] "AT1G33420" "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33800" "AT1G33950" "AT1G33960"
## [218] "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140" "AT1G35210" "AT1G35230" "AT1G35910"
## [225] "AT1G36370" "AT1G43670" "AT1G43910" "AT1G44000" "AT1G44130" "AT1G44446" "AT1G47210"
## [232] "AT1G47370" "AT1G47510" "AT1G47890" "AT1G48030" "AT1G48315" "AT1G48320" "AT1G48605"
## [239] "AT1G49050" "AT1G49380" "AT1G49490" "AT1G49650" "AT1G49975" "AT1G49990" "AT1G50040"
## [246] "AT1G50590" "AT1G51400" "AT1G51402" "AT1G51640" "AT1G51645" "AT1G51660" "AT1G51670"
## [253] "AT1G51760" "AT1G51805" "AT1G51860" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52315"
## [260] "AT1G52342" "AT1G52540" "AT1G52565" "AT1G53620" "AT1G53625" "AT1G54780" "AT1G54790"
## [267] "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55480" "AT1G55610" "AT1G55790" "AT1G56060"
## [274] "AT1G56600" "AT1G57560" "AT1G57630" "AT1G57650" "AT1G59590" "AT1G60160" "AT1G60690"
## [281] "AT1G60730" "AT1G60800" "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260"
## [288] "AT1G61300" "AT1G61340" "AT1G61370" "AT1G61420" "AT1G61550" "AT1G61640" "AT1G61800"
## [295] "AT1G61810" "AT1G62180" "AT1G62560" "AT1G62580" "AT1G62630" "AT1G63090" "AT1G63245"
## [302] "AT1G63570" "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G64065" "AT1G64355"
## [309] "AT1G64400" "AT1G64610" "AT1G64680" "AT1G64770" "AT1G65230" "AT1G65481" "AT1G65483"
## [316] "AT1G65690" "AT1G65870" "AT1G66090" "AT1G66130" "AT1G66230" "AT1G66250" "AT1G66390"
## [323] "AT1G66550" "AT1G66600" "AT1G66780" "AT1G67060" "AT1G67070" "AT1G67590" "AT1G67635"
## [330] "AT1G67650" "AT1G67800" "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67920" "AT1G68110"
## [337] "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68540" "AT1G68690" "AT1G68710" "AT1G68830"
## [344] "AT1G68890" "AT1G69140" "AT1G69260" "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69840"
## [351] "AT1G69890" "AT1G69930" "AT1G70090" "AT1G70170" "AT1G70290" "AT1G70580" "AT1G70690"
## [358] "AT1G70820" "AT1G71000" "AT1G71030" "AT1G71390" "AT1G71690" "AT1G72000" "AT1G72030"
## [365] "AT1G72140" "AT1G72150" "AT1G72240" "AT1G72416" "AT1G72500" "AT1G72540" "AT1G72600"
## [372] "AT1G72610" "AT1G72630" "AT1G72640" "AT1G72645" "AT1G72680" "AT1G72700" "AT1G72770"
## [379] "AT1G72890" "AT1G72900" "AT1G72920" "AT1G73130" "AT1G73750" "AT1G73805" "AT1G73810"
## [386] "AT1G74070" "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74590" "AT1G74710" "AT1G74750"
## [393] "AT1G74930" "AT1G74940" "AT1G75060" "AT1G75170" "AT1G75250" "AT1G75460" "AT1G75900"
## [400] "AT1G76040" "AT1G76080" "AT1G76100" "AT1G76110" "AT1G76620" "AT1G76690" "AT1G76760"
## [407] "AT1G76970" "AT1G76980" "AT1G77090" "AT1G77210" "AT1G77500" "AT1G77640" "AT1G77760"
## [414] "AT1G77810" "AT1G77890" "AT1G78000" "AT1G78100" "AT1G78380" "AT1G78410" "AT1G78450"
## [421] "AT1G78600" "AT1G78780" "AT1G78990" "AT1G78995" "AT1G79400" "AT1G79450" "AT1G79680"
## [428] "AT1G79770" "AT1G80110" "AT1G80280" "AT1G80300" "AT1G80440" "AT1G80450" "AT1G80610"
## [435] "AT1G80830" "AT1G80920" "AT2G01300" "AT2G01590" "AT2G01755" "AT2G01818" "AT2G01850"
## [442] "AT2G01870" "AT2G01890" "AT2G02070" "AT2G02310" "AT2G02340" "AT2G02930" "AT2G02950"
## [449] "AT2G02990" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03710" "AT2G04040"
## [456] "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04790"
## [463] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940" "AT2G12550" "AT2G13360"
## [470] "AT2G13790" "AT2G13810" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G15090" "AT2G15890"
## [477] "AT2G15970" "AT2G16365" "AT2G16630" "AT2G16720" "AT2G16900" "AT2G17220" "AT2G17230"
## [484] "AT2G17440" "AT2G17500" "AT2G17695" "AT2G17720" "AT2G18000" "AT2G18160" "AT2G18162"
## [491] "AT2G18300" "AT2G18560" "AT2G18660" "AT2G18690" "AT2G18940" "AT2G19190" "AT2G19710"
## [498] "AT2G20110" "AT2G20142" "AT2G20680" "AT2G21130" "AT2G21188" "AT2G21470" "AT2G21510"
## [505] "AT2G21780" "AT2G21790" "AT2G21970" "AT2G22200" "AT2G22810" "AT2G23130" "AT2G23290"
## [512] "AT2G23600" "AT2G23680" "AT2G23810" "AT2G23840" "AT2G24285" "AT2G24550" "AT2G24580"
## [519] "AT2G24850" "AT2G25130" "AT2G25190" "AT2G25200" "AT2G25520" "AT2G25737" "AT2G25900"
## [526] "AT2G26080" "AT2G26300" "AT2G26390" "AT2G26400" "AT2G26480" "AT2G26710" "AT2G26975"
## [533] "AT2G27420" "AT2G28120" "AT2G28210" "AT2G28305" "AT2G28400" "AT2G28570" "AT2G28605"
## [540] "AT2G29100" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360"
## [547] "AT2G29400" "AT2G29460" "AT2G29630" "AT2G29650" "AT2G29670" "AT2G29720" "AT2G29750"
## [554] "AT2G29990" "AT2G30070" "AT2G30150" "AT2G30390" "AT2G30395" "AT2G30400" "AT2G30420"
## [561] "AT2G30550" "AT2G30750" "AT2G30770" "AT2G30930" "AT2G31018" "AT2G31020" "AT2G31270"
## [568] "AT2G31585" "AT2G31790" "AT2G31865" "AT2G31990" "AT2G32030" "AT2G32100" "AT2G32130"
## [575] "AT2G32140" "AT2G32179" "AT2G32180" "AT2G32200" "AT2G32210" "AT2G32290" "AT2G32430"
## [582] "AT2G32460" "AT2G32470" "AT2G32480" "AT2G32560" "AT2G32640" "AT2G33110" "AT2G33255"
## [589] "AT2G33855" "AT2G34070" "AT2G34500" "AT2G34580" "AT2G34610" "AT2G34620" "AT2G34650"
## [596] "AT2G35130" "AT2G35260" "AT2G35660" "AT2G35710" "AT2G36580" "AT2G36670" "AT2G36690"
## [603] "AT2G36830" "AT2G36990" "AT2G37070" "AT2G37260" "AT2G37440" "AT2G37450" "AT2G37540"
## [610] "AT2G37585" "AT2G37750" "AT2G37950" "AT2G37980" "AT2G38230" "AT2G38290" "AT2G38460"
## [617] "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38860" "AT2G39110" "AT2G39220" "AT2G39320"
## [624] "AT2G39435" "AT2G39650" "AT2G39730" "AT2G39980" "AT2G40000" "AT2G40095" "AT2G40140"
## [631] "AT2G40540" "AT2G40670" "AT2G40740" "AT2G40840" "AT2G40960" "AT2G41010" "AT2G41100"
## [638] "AT2G41380" "AT2G41410" "AT2G41430" "AT2G41480" "AT2G41660" "AT2G41835" "AT2G41880"
## [645] "AT2G42060" "AT2G42320" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43010" "AT2G43100"
## [652] "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43620" "AT2G43680" "AT2G44290" "AT2G44578"
## [659] "AT2G44600" "AT2G44910" "AT2G44940" "AT2G45180" "AT2G45220" "AT2G45400" "AT2G45560"
## [666] "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46450"
## [673] "AT2G46620" "AT2G46790" "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47200" "AT2G47485"
## [680] "AT2G47490" "AT2G47720" "AT2G47730" "AT2G47800" "AT2G47820" "AT2G47920" "AT2G47950"
## [687] "AT3G01060" "AT3G01290" "AT3G01440" "AT3G01810" "AT3G01820" "AT3G01830" "AT3G02050"
## [694] "AT3G02610" "AT3G02730" "AT3G02770" "AT3G03190" "AT3G03310" "AT3G03440" "AT3G03450"
## [701] "AT3G03610" "AT3G03780" "AT3G04060" "AT3G04220" "AT3G04550" "AT3G04670" "AT3G04960"
## [708] "AT3G05360" "AT3G05500" "AT3G05625" "AT3G05650" "AT3G05830" "AT3G05936" "AT3G06070"
## [715] "AT3G06145" "AT3G06160" "AT3G06520" "AT3G06890" "AT3G07310" "AT3G07370" "AT3G07390"
## [722] "AT3G07500" "AT3G07700" "AT3G07720" "AT3G08000" "AT3G08720" "AT3G08920" "AT3G08940"
## [729] "AT3G08990" "AT3G09010" "AT3G09032" "AT3G09050" "AT3G09160" "AT3G09162" "AT3G09280"
## [736] "AT3G09405" "AT3G09580" "AT3G10500" "AT3G10520" "AT3G10540" "AT3G10815" "AT3G11010"
## [743] "AT3G11080" "AT3G11110" "AT3G11220" "AT3G11340" "AT3G11820" "AT3G11840" "AT3G12230"
## [750] "AT3G12685" "AT3G12830" "AT3G12910" "AT3G13080" "AT3G13090" "AT3G13100" "AT3G13380"
## [757] "AT3G13433" "AT3G13470" "AT3G13610" "AT3G13750" "AT3G13900" "AT3G13910" "AT3G13950"
## [764] "AT3G14050" "AT3G14060" "AT3G14415" "AT3G14440" "AT3G14470" "AT3G14475" "AT3G14590"
## [771] "AT3G14700" "AT3G14710" "AT3G14840" "AT3G14990" "AT3G15570" "AT3G15850" "AT3G15990"
## [778] "AT3G16030" "AT3G16250" "AT3G16350" "AT3G16620" "AT3G16800" "AT3G16980" "AT3G17170"
## [785] "AT3G17240" "AT3G17420" "AT3G17470" "AT3G17520" "AT3G17640" "AT3G17690" "AT3G17800"
## [792] "AT3G17930" "AT3G18080" "AT3G18250" "AT3G18750" "AT3G18773" "AT3G19000" "AT3G19002"
## [799] "AT3G19480" "AT3G19580" "AT3G19680" "AT3G19690" "AT3G19910" "AT3G19930" "AT3G19970"
## [806] "AT3G20250" "AT3G20350" "AT3G20820" "AT3G21080" "AT3G21140" "AT3G21220" "AT3G21240"
## [813] "AT3G21320" "AT3G21460" "AT3G21520" "AT3G21530" "AT3G21560" "AT3G21700" "AT3G21755"
## [820] "AT3G21760" "AT3G21870" "AT3G22160" "AT3G22400" "AT3G22600" "AT3G22910" "AT3G22930"
## [827] "AT3G23120" "AT3G23240" "AT3G23880" "AT3G24030" "AT3G24430" "AT3G24927" "AT3G25010"
## [834] "AT3G25070" "AT3G25250" "AT3G25290" "AT3G25410" "AT3G25510" "AT3G25610" "AT3G25717"
## [841] "AT3G25870" "AT3G25882" "AT3G25890" "AT3G26210" "AT3G26280" "AT3G26440" "AT3G26470"
## [848] "AT3G26490" "AT3G26510" "AT3G26570" "AT3G26680" "AT3G26690" "AT3G26740" "AT3G26830"
## [855] "AT3G26840" "AT3G27560" "AT3G27690" "AT3G28340" "AT3G28510" "AT3G28540" "AT3G28580"
## [862] "AT3G28930" "AT3G29000" "AT3G29185" "AT3G29320" "AT3G29575" "AT3G44020" "AT3G44300"
## [869] "AT3G44350" "AT3G44400" "AT3G44720" "AT3G44830" "AT3G45040" "AT3G45330" "AT3G45410"
## [876] "AT3G45780" "AT3G45970" "AT3G46080" "AT3G46090" "AT3G46130" "AT3G46370" "AT3G46510"
## [883] "AT3G46520" "AT3G46580" "AT3G46620" "AT3G46630" "AT3G46640" "AT3G46970" "AT3G47070"
## [890] "AT3G47430" "AT3G47480" "AT3G47500" "AT3G47530" "AT3G47540" "AT3G47730" "AT3G47750"
## [897] "AT3G47780" "AT3G48020" "AT3G48090" "AT3G48200" "AT3G48240" "AT3G48280" "AT3G48350"
## [904] "AT3G48420" "AT3G48460" "AT3G48490" "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48720"
## [911] "AT3G48780" "AT3G48850" "AT3G49110" "AT3G49470" "AT3G49530" "AT3G49540" "AT3G49570"
## [918] "AT3G49580" "AT3G49790" "AT3G50060" "AT3G50480" "AT3G50685" "AT3G50760" "AT3G50770"
## [925] "AT3G50800" "AT3G50840" "AT3G50930" "AT3G51330" "AT3G51350" "AT3G51400" "AT3G51420"
## [932] "AT3G51510" "AT3G51860" "AT3G52070" "AT3G52072" "AT3G52430" "AT3G52460" "AT3G52470"
## [939] "AT3G52540" "AT3G52870" "AT3G53120" "AT3G53150" "AT3G53232" "AT3G53235" "AT3G53420"
## [946] "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54150" "AT3G54500" "AT3G54600" "AT3G54640"
## [953] "AT3G54830" "AT3G55240" "AT3G55470" "AT3G55500" "AT3G55630" "AT3G55646" "AT3G55730"
## [960] "AT3G55760" "AT3G55880" "AT3G55950" "AT3G56000" "AT3G56160" "AT3G56170" "AT3G56290"
## [967] "AT3G56400" "AT3G56710" "AT3G56891" "AT3G57100" "AT3G57190" "AT3G57260" "AT3G57330"
## [974] "AT3G57380" "AT3G57460" "AT3G57880" "AT3G57950" "AT3G58620" "AT3G58990" "AT3G59060"
## [981] "AT3G59700" "AT3G59940" "AT3G60110" "AT3G60164" "AT3G60190" "AT3G60420" "AT3G60450"
## [988] "AT3G60470" "AT3G60520" "AT3G60800" "AT3G60966" "AT3G61060" "AT3G61190" "AT3G61198"
## [995] "AT3G61390" "AT3G61870" "AT3G61960" "AT3G62260" "AT3G62410" "AT3G62550"
## [ reached getOption("max.print") -- omitted 622 entries ]
##
## $UporDown$`M6-V6`
## [1] "AT1G01010" "AT1G01390" "AT1G01680" "AT1G02520" "AT1G03130" "AT1G03630" "AT1G04490"
## [8] "AT1G05100" "AT1G05675" "AT1G05840" "AT1G06040" "AT1G06460" "AT1G06680" "AT1G07050"
## [15] "AT1G07500" "AT1G07570" "AT1G08380" "AT1G09932" "AT1G10020" "AT1G10150" "AT1G10657"
## [22] "AT1G10760" "AT1G10960" "AT1G11400" "AT1G12090" "AT1G12710" "AT1G12730" "AT1G13245"
## [29] "AT1G13260" "AT1G13330" "AT1G13340" "AT1G13650" "AT1G13930" "AT1G14150" "AT1G14200"
## [36] "AT1G14700" "AT1G15350" "AT1G15820" "AT1G15980" "AT1G17380" "AT1G17750" "AT1G17830"
## [43] "AT1G17970" "AT1G18000" "AT1G18010" "AT1G19150" "AT1G19180" "AT1G19540" "AT1G19640"
## [50] "AT1G19680" "AT1G19960" "AT1G20020" "AT1G20310" "AT1G20460" "AT1G21130" "AT1G21500"
## [57] "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23390" "AT1G23740"
## [64] "AT1G23850" "AT1G24020" "AT1G25400" "AT1G25560" "AT1G26770" "AT1G26800" "AT1G26930"
## [71] "AT1G27480" "AT1G29440" "AT1G29910" "AT1G29920" "AT1G30100" "AT1G30380" "AT1G30850"
## [78] "AT1G31330" "AT1G31690" "AT1G31770" "AT1G31900" "AT1G32080" "AT1G32220" "AT1G32870"
## [85] "AT1G33600" "AT1G33950" "AT1G34180" "AT1G35140" "AT1G36370" "AT1G43670" "AT1G43910"
## [92] "AT1G44446" "AT1G44575" "AT1G48605" "AT1G49530" "AT1G50590" "AT1G51080" "AT1G51110"
## [99] "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51760" "AT1G51805" "AT1G51860" "AT1G52220"
## [106] "AT1G52342" "AT1G52565" "AT1G52890" "AT1G54010" "AT1G54095" "AT1G54780" "AT1G54790"
## [113] "AT1G54820" "AT1G55370" "AT1G55610" "AT1G56300" "AT1G57590" "AT1G57990" "AT1G58030"
## [120] "AT1G60190" "AT1G60730" "AT1G60800" "AT1G61120" "AT1G61190" "AT1G61300" "AT1G61520"
## [127] "AT1G64770" "AT1G65230" "AT1G65845" "AT1G65890" "AT1G66130" "AT1G66230" "AT1G66280"
## [134] "AT1G66350" "AT1G68050" "AT1G68840" "AT1G69140" "AT1G69260" "AT1G69480" "AT1G69530"
## [141] "AT1G69830" "AT1G69890" "AT1G70420" "AT1G70820" "AT1G71000" "AT1G71030" "AT1G71110"
## [148] "AT1G71390" "AT1G71970" "AT1G72416" "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72770"
## [155] "AT1G73130" "AT1G73470" "AT1G73480" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74100"
## [162] "AT1G74430" "AT1G74710" "AT1G74730" "AT1G75280" "AT1G75900" "AT1G76080" "AT1G77280"
## [169] "AT1G78000" "AT1G78290" "AT1G78600" "AT1G78990" "AT1G79270" "AT1G79330" "AT1G80110"
## [176] "AT1G80280" "AT1G80440" "AT1G80840" "AT1G80920" "AT2G01755" "AT2G01830" "AT2G01890"
## [183] "AT2G02070" "AT2G02450" "AT2G03440" "AT2G05070" "AT2G05100" "AT2G06255" "AT2G15090"
## [190] "AT2G15760" "AT2G15890" "AT2G15970" "AT2G16365" "AT2G16650" "AT2G16720" "AT2G17500"
## [197] "AT2G17880" "AT2G18160" "AT2G18162" "AT2G18350" "AT2G19310" "AT2G21130" "AT2G22200"
## [204] "AT2G22330" "AT2G22770" "AT2G22810" "AT2G23290" "AT2G23840" "AT2G24240" "AT2G24550"
## [211] "AT2G24580" "AT2G25200" "AT2G25900" "AT2G26150" "AT2G26480" "AT2G26560" "AT2G27228"
## [218] "AT2G27230" "AT2G27385" "AT2G28120" "AT2G28450" "AT2G28570" "AT2G28900" "AT2G29170"
## [225] "AT2G29290" "AT2G29310" "AT2G29360" "AT2G29650" "AT2G30070" "AT2G30420" "AT2G30820"
## [232] "AT2G30830" "AT2G31040" "AT2G32100" "AT2G32500" "AT2G34070" "AT2G34410" "AT2G34420"
## [239] "AT2G34620" "AT2G35950" "AT2G36145" "AT2G36390" "AT2G37440" "AT2G37540" "AT2G37585"
## [246] "AT2G37950" "AT2G38250" "AT2G38500" "AT2G38800" "AT2G39400" "AT2G40000" "AT2G40080"
## [253] "AT2G40100" "AT2G40340" "AT2G40460" "AT2G40670" "AT2G40840" "AT2G40960" "AT2G41430"
## [260] "AT2G42530" "AT2G42760" "AT2G42890" "AT2G43010" "AT2G43120" "AT2G43320" "AT2G43570"
## [267] "AT2G43620" "AT2G43680" "AT2G44490" "AT2G44578" "AT2G44600" "AT2G44840" "AT2G44940"
## [274] "AT2G45560" "AT2G45920" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46790" "AT2G46900"
## [281] "AT2G47420" "AT2G47950" "AT3G01060" "AT3G01500" "AT3G01770" "AT3G01810" "AT3G02730"
## [288] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G06490" "AT3G06890" "AT3G07310" "AT3G08920"
## [295] "AT3G08940" "AT3G09580" "AT3G10020" "AT3G10060" "AT3G10520" "AT3G11450" "AT3G11480"
## [302] "AT3G12920" "AT3G13080" "AT3G13470" "AT3G13610" "AT3G14200" "AT3G14440" "AT3G14680"
## [309] "AT3G16250" "AT3G16310" "AT3G16620" "AT3G17120" "AT3G17510" "AT3G18080" "AT3G18500"
## [316] "AT3G18773" "AT3G18890" "AT3G19680" "AT3G19690" "AT3G21080" "AT3G21500" "AT3G21700"
## [323] "AT3G22275" "AT3G22290" "AT3G23880" "AT3G24515" "AT3G25510" "AT3G25890" "AT3G26290"
## [330] "AT3G26440" "AT3G26470" "AT3G26510" "AT3G26740" "AT3G27170" "AT3G27415" "AT3G27416"
## [337] "AT3G27690" "AT3G27809" "AT3G27810" "AT3G28510" "AT3G28580" "AT3G29320" "AT3G29330"
## [344] "AT3G46370" "AT3G46630" "AT3G46640" "AT3G46658" "AT3G46660" "AT3G46780" "AT3G46970"
## [351] "AT3G47070" "AT3G47420" "AT3G47460" "AT3G47470" "AT3G47500" "AT3G47730" "AT3G48100"
## [358] "AT3G48115" "AT3G48280" "AT3G48420" "AT3G48520" "AT3G48580" "AT3G48720" "AT3G48780"
## [365] "AT3G49580" "AT3G50960" "AT3G51670" "AT3G52070" "AT3G52072" "AT3G53470" "AT3G53800"
## [372] "AT3G53830" "AT3G54320" "AT3G54366" "AT3G54500" "AT3G54890" "AT3G55240" "AT3G55630"
## [379] "AT3G55760" "AT3G56160" "AT3G56170" "AT3G57260" "AT3G57950" "AT3G59060" "AT3G59870"
## [386] "AT3G60390" "AT3G61198" "AT3G61870" "AT3G61890" "AT3G62550" "AT3G63010" "AT3G63160"
## [393] "AT4G00165" "AT4G00700" "AT4G01540" "AT4G02380" "AT4G02760" "AT4G02770" "AT4G03460"
## [400] "AT4G03510" "AT4G04020" "AT4G04223" "AT4G04330" "AT4G04510" "AT4G04810" "AT4G04830"
## [407] "AT4G05070" "AT4G06744" "AT4G09760" "AT4G10120" "AT4G10340" "AT4G10390" "AT4G11240"
## [414] "AT4G11300" "AT4G11360" "AT4G11521" "AT4G12320" "AT4G12500" "AT4G12800" "AT4G12830"
## [421] "AT4G13010" "AT4G14270" "AT4G15210" "AT4G15233" "AT4G15430" "AT4G15780" "AT4G16260"
## [428] "AT4G16880" "AT4G17100" "AT4G17660" "AT4G17730" "AT4G17810" "AT4G18205" "AT4G18220"
## [435] "AT4G19170" "AT4G19530" "AT4G21445" "AT4G21870" "AT4G22070" "AT4G23150" "AT4G23180"
## [442] "AT4G23310" "AT4G23420" "AT4G23810" "AT4G24240" "AT4G25290" "AT4G25390" "AT4G25433"
## [449] "AT4G26080" "AT4G26120" "AT4G26470" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27310"
## [456] "AT4G27440" "AT4G27700" "AT4G27860" "AT4G27870" "AT4G28703" "AT4G29190" "AT4G29380"
## [463] "AT4G29930" "AT4G32280" "AT4G33660" "AT4G33980" "AT4G34650" "AT4G35720" "AT4G36040"
## [470] "AT4G36530" "AT4G36780" "AT4G36950" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37850"
## [477] "AT4G38550" "AT4G38552" "AT4G38560" "AT4G39730" "AT4G39950" "AT5G01840" "AT5G01850"
## [484] "AT5G02100" "AT5G02180" "AT5G02810" "AT5G02890" "AT5G04860" "AT5G05580" "AT5G05680"
## [491] "AT5G05890" "AT5G06110" "AT5G06220" "AT5G06230" "AT5G06290" "AT5G08410" "AT5G08620"
## [498] "AT5G10250" "AT5G10690" "AT5G11070" "AT5G11242" "AT5G11390" "AT5G12110" "AT5G12950"
## [505] "AT5G13220" "AT5G13320" "AT5G13630" "AT5G13730" "AT5G13820" "AT5G14090" "AT5G14390"
## [512] "AT5G14700" "AT5G15190" "AT5G16350" "AT5G16360" "AT5G17330" "AT5G17760" "AT5G18030"
## [519] "AT5G19110" "AT5G21280" "AT5G21430" "AT5G22920" "AT5G23210" "AT5G23360" "AT5G24240"
## [526] "AT5G24280" "AT5G24290" "AT5G24300" "AT5G24460" "AT5G24470" "AT5G25240" "AT5G25280"
## [533] "AT5G26220" "AT5G26270" "AT5G26920" "AT5G27290" "AT5G28610" "AT5G28919" "AT5G28920"
## [540] "AT5G38130" "AT5G38510" "AT5G38980" "AT5G39210" "AT5G39530" "AT5G39670" "AT5G40210"
## [547] "AT5G40500" "AT5G41315" "AT5G41610" "AT5G41612" "AT5G43440" "AT5G43750" "AT5G44005"
## [554] "AT5G44060" "AT5G44260" "AT5G44350" "AT5G44410" "AT5G44990" "AT5G45090" "AT5G45820"
## [561] "AT5G46410" "AT5G46840" "AT5G47370" "AT5G47960" "AT5G48545" "AT5G49280" "AT5G49448"
## [568] "AT5G49450" "AT5G49730" "AT5G49900" "AT5G50450" "AT5G51550" "AT5G51720" "AT5G53290"
## [575] "AT5G53360" "AT5G54240" "AT5G54270" "AT5G54585" "AT5G54700" "AT5G55740" "AT5G56050"
## [582] "AT5G56544" "AT5G56550" "AT5G57560" "AT5G58310" "AT5G58620" "AT5G59130" "AT5G59220"
## [589] "AT5G59480" "AT5G59590" "AT5G60100" "AT5G60680" "AT5G60800" "AT5G60890" "AT5G61160"
## [596] "AT5G61270" "AT5G61440" "AT5G61590" "AT5G61960" "AT5G62190" "AT5G62280" "AT5G62430"
## [603] "AT5G62720" "AT5G62730" "AT5G63225" "AT5G63380" "AT5G63450" "AT5G63780" "AT5G64170"
## [610] "AT5G64530" "AT5G65207" "AT5G65280" "AT5G66053" "AT5G66650" "AT5G67160" "AT5G67200"
## [617] "AT5G67370" "ATCG00930"
##
## $UporDown$`A6-V6`
## [1] "AT1G02220" "AT1G02270" "AT1G02390" "AT1G05020" "AT1G05880" "AT1G08860" "AT1G14200"
## [8] "AT1G16400" "AT1G19020" "AT1G19250" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22770"
## [15] "AT1G23200" "AT1G31290" "AT1G31690" "AT1G34210" "AT1G49530" "AT1G54095" "AT1G66280"
## [22] "AT1G66550" "AT1G66600" "AT1G67810" "AT1G68200" "AT1G68390" "AT1G71100" "AT1G73210"
## [29] "AT1G74430" "AT2G01830" "AT2G04040" "AT2G06255" "AT2G07690" "AT2G13810" "AT2G22200"
## [36] "AT2G26560" "AT2G29720" "AT2G34500" "AT2G37980" "AT2G39110" "AT2G40460" "AT2G40550"
## [43] "AT2G47140" "AT2G47730" "AT3G13080" "AT3G13100" "AT3G21670" "AT3G22910" "AT3G26830"
## [50] "AT3G27170" "AT3G43270" "AT3G44830" "AT3G47540" "AT3G47750" "AT3G48640" "AT3G49540"
## [57] "AT3G55470" "AT3G60450" "AT3G61420" "AT4G02380" "AT4G16820" "AT4G22530" "AT4G30280"
## [64] "AT4G34135" "AT4G35180" "AT4G37030" "AT4G37370" "AT4G37390" "AT5G01040" "AT5G01050"
## [71] "AT5G01840" "AT5G02490" "AT5G02810" "AT5G11160" "AT5G21280" "AT5G22060" "AT5G22530"
## [78] "AT5G24280" "AT5G24910" "AT5G25930" "AT5G26270" "AT5G41730" "AT5G42380" "AT5G43910"
## [85] "AT5G52810" "AT5G54700" "AT5G60890" "AT5G61900" "AT5G62180" "AT5G63450" "AT5G64870"
## [92] "AT5G66890" "ATCG00330" "ATCG00340" "ATCG00350" "ATCG00490" "ATCG00710" "ATCG00930"
## [99] "ATCG00940" "ATCG01200" "ATMG00020"
##
## $UporDown$`M12-A12`
## [1] "AT1G01010" "AT1G01120" "AT1G01190" "AT1G01300" "AT1G01340" "AT1G01370" "AT1G01430"
## [8] "AT1G01480" "AT1G01560" "AT1G01610" "AT1G01620" "AT1G01680" "AT1G02220" "AT1G02230"
## [15] "AT1G02405" "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02650" "AT1G02660" "AT1G02710"
## [22] "AT1G02750" "AT1G03050" "AT1G03180" "AT1G03210" "AT1G03290" "AT1G03400" "AT1G03600"
## [29] "AT1G03630" "AT1G03660" "AT1G03680" "AT1G03850" "AT1G04160" "AT1G04310" "AT1G04420"
## [36] "AT1G04490" "AT1G04780" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05420" "AT1G05570"
## [43] "AT1G05680" "AT1G05880" "AT1G06160" "AT1G06180" "AT1G06240" "AT1G06265" "AT1G06460"
## [50] "AT1G06620" "AT1G06660" "AT1G07000" "AT1G07020" "AT1G07430" "AT1G07440" "AT1G07500"
## [57] "AT1G07590" "AT1G07600" "AT1G07620" "AT1G07630" "AT1G07880" "AT1G08050" "AT1G08160"
## [64] "AT1G08300" "AT1G08630" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09340"
## [71] "AT1G09350" "AT1G09440" "AT1G09500" "AT1G09560" "AT1G09750" "AT1G10070" "AT1G10340"
## [78] "AT1G10380" "AT1G10410" "AT1G10657" "AT1G10710" "AT1G10910" "AT1G10960" "AT1G11130"
## [85] "AT1G11330" "AT1G11400" "AT1G11480" "AT1G11670" "AT1G11720" "AT1G11860" "AT1G11905"
## [92] "AT1G11925" "AT1G12060" "AT1G12090" "AT1G12250" "AT1G12320" "AT1G12500" "AT1G12730"
## [99] "AT1G12900" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13380" "AT1G13550" "AT1G13650"
## [106] "AT1G13790" "AT1G13990" "AT1G14030" "AT1G14150" "AT1G14270" "AT1G14330" "AT1G14687"
## [113] "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14900" "AT1G15000" "AT1G15080" "AT1G15125"
## [120] "AT1G15160" "AT1G15180" "AT1G15260" "AT1G15290" "AT1G15380" "AT1G15415" "AT1G15510"
## [127] "AT1G15520" "AT1G15550" "AT1G15690" "AT1G15790" "AT1G15800" "AT1G15980" "AT1G15990"
## [134] "AT1G16080" "AT1G16150" "AT1G16300" "AT1G16410" "AT1G16670" "AT1G16720" "AT1G17020"
## [141] "AT1G17100" "AT1G17200" "AT1G17380" "AT1G17490" "AT1G17500" "AT1G17600" "AT1G17650"
## [148] "AT1G17750" "AT1G17850" "AT1G18000" "AT1G18010" "AT1G18415" "AT1G18420" "AT1G18620"
## [155] "AT1G18650" "AT1G18735" "AT1G18890" "AT1G19020" "AT1G19150" "AT1G19160" "AT1G19180"
## [162] "AT1G19200" "AT1G19220" "AT1G19250" "AT1G19270" "AT1G19350" "AT1G19450" "AT1G19640"
## [169] "AT1G20010" "AT1G20020" "AT1G20310" "AT1G20340" "AT1G20780" "AT1G20823" "AT1G21000"
## [176] "AT1G21200" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21500" "AT1G21520" "AT1G21525"
## [183] "AT1G21680" "AT1G21740" "AT1G21880" "AT1G21910" "AT1G22180" "AT1G22220" "AT1G22280"
## [190] "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22403" "AT1G22470" "AT1G22480" "AT1G22510"
## [197] "AT1G22550" "AT1G22590" "AT1G22840" "AT1G22850" "AT1G23040" "AT1G23050" "AT1G23052"
## [204] "AT1G23080" "AT1G23120" "AT1G23480" "AT1G23530" "AT1G23550" "AT1G23740" "AT1G23840"
## [211] "AT1G23850" "AT1G23935" "AT1G24145" "AT1G24147" "AT1G24150" "AT1G25400" "AT1G25450"
## [218] "AT1G26130" "AT1G26150" "AT1G26230" "AT1G26290" "AT1G26380" "AT1G26690" "AT1G26761"
## [225] "AT1G26810" "AT1G26930" "AT1G27020" "AT1G27110" "AT1G27210" "AT1G27300" "AT1G27420"
## [232] "AT1G27460" "AT1G27480" "AT1G27980" "AT1G28190" "AT1G28480" "AT1G29195" "AT1G29240"
## [239] "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29640" "AT1G29660" "AT1G29670"
## [246] "AT1G29790" "AT1G29980" "AT1G30040" "AT1G30135" "AT1G30220" "AT1G30270" "AT1G30280"
## [253] "AT1G30473" "AT1G30520" "AT1G30620" "AT1G30755" "AT1G30760" "AT1G30814" "AT1G30840"
## [260] "AT1G30850" "AT1G30900" "AT1G31173" "AT1G31290" "AT1G31330" "AT1G31540" "AT1G31550"
## [267] "AT1G31710" "AT1G31835" "AT1G31900" "AT1G32060" "AT1G32080" "AT1G32200" "AT1G32210"
## [274] "AT1G32220" "AT1G32350" "AT1G32470" "AT1G32540" "AT1G32550" "AT1G32560" "AT1G32860"
## [281] "AT1G32870" "AT1G32910" "AT1G32920" "AT1G32940" "AT1G32960" "AT1G32990" "AT1G33030"
## [288] "AT1G33240" "AT1G33420" "AT1G33430" "AT1G33560" "AT1G33600" "AT1G33720" "AT1G33730"
## [295] "AT1G33770" "AT1G33811" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750"
## [302] "AT1G35140" "AT1G35210" "AT1G35420" "AT1G35580" "AT1G35680" "AT1G35910" "AT1G36622"
## [309] "AT1G42970" "AT1G42980" "AT1G43160" "AT1G43910" "AT1G44130" "AT1G44575" "AT1G45145"
## [316] "AT1G45545" "AT1G47056" "AT1G47440" "AT1G47510" "AT1G47670" "AT1G48030" "AT1G48315"
## [323] "AT1G48320" "AT1G48370" "AT1G48605" "AT1G49010" "AT1G49050" "AT1G49200" "AT1G49380"
## [330] "AT1G49450" "AT1G49650" "AT1G49730" "AT1G49900" "AT1G50420" "AT1G50450" "AT1G50740"
## [337] "AT1G50900" "AT1G50910" "AT1G51080" "AT1G51110" "AT1G51130" "AT1G51660" "AT1G51670"
## [344] "AT1G51760" "AT1G51790" "AT1G51860" "AT1G51940" "AT1G52190" "AT1G52200" "AT1G52315"
## [351] "AT1G52565" "AT1G52690" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53300" "AT1G53620"
## [358] "AT1G53625" "AT1G53830" "AT1G53920" "AT1G54100" "AT1G54570" "AT1G54575" "AT1G54730"
## [365] "AT1G54780" "AT1G54820" "AT1G54890" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490"
## [372] "AT1G55610" "AT1G55790" "AT1G56500" "AT1G56550" "AT1G56660" "AT1G56720" "AT1G57560"
## [379] "AT1G57630" "AT1G57650" "AT1G58150" "AT1G58370" "AT1G59740" "AT1G59840" "AT1G60000"
## [386] "AT1G60160" "AT1G60190" "AT1G60420" "AT1G60550" "AT1G60600" "AT1G60610" "AT1G60690"
## [393] "AT1G60700" "AT1G60730" "AT1G60800" "AT1G60890" "AT1G60950" "AT1G61065" "AT1G61140"
## [400] "AT1G61160" "AT1G61215" "AT1G61240" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [407] "AT1G61560" "AT1G61795" "AT1G61800" "AT1G61810" "AT1G61820" "AT1G62300" "AT1G62520"
## [414] "AT1G62570" "AT1G62580" "AT1G62750" "AT1G62840" "AT1G62975" "AT1G63040" "AT1G63120"
## [421] "AT1G63245" "AT1G63440" "AT1G63460" "AT1G63480" "AT1G63720" "AT1G63740" "AT1G63820"
## [428] "AT1G64150" "AT1G64390" "AT1G64510" "AT1G64610" "AT1G64660" "AT1G64680" "AT1G64770"
## [435] "AT1G65230" "AT1G65483" "AT1G65490" "AT1G65590" "AT1G65610" "AT1G65860" "AT1G66130"
## [442] "AT1G66140" "AT1G66170" "AT1G66410" "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590"
## [449] "AT1G66600" "AT1G66725" "AT1G66820" "AT1G67060" "AT1G67070" "AT1G67190" "AT1G67520"
## [456] "AT1G67590" "AT1G67635" "AT1G67650" "AT1G67700" "AT1G67740" "AT1G67810" "AT1G67850"
## [463] "AT1G67970" "AT1G67980" "AT1G68010" "AT1G68190" "AT1G68200" "AT1G68250" "AT1G68390"
## [470] "AT1G68400" "AT1G68440" "AT1G68520" "AT1G68530" "AT1G68560" "AT1G68620" "AT1G68710"
## [477] "AT1G68740" "AT1G68810" "AT1G68820" "AT1G68890" "AT1G68935" "AT1G68940" "AT1G69050"
## [484] "AT1G69140" "AT1G69260" "AT1G69480" "AT1G69490" "AT1G69520" "AT1G69530" "AT1G69610"
## [491] "AT1G69720" "AT1G69840" "AT1G69930" "AT1G70280" "AT1G70370" "AT1G70410" "AT1G70430"
## [498] "AT1G70480" "AT1G70690" "AT1G70760" "AT1G70810" "AT1G70820" "AT1G70940" "AT1G71100"
## [505] "AT1G71690" "AT1G71697" "AT1G72000" "AT1G72120" "AT1G72140" "AT1G72240" "AT1G72270"
## [512] "AT1G72310" "AT1G72330" "AT1G72420" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72680"
## [519] "AT1G72690" "AT1G72770" "AT1G72810" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940"
## [526] "AT1G73010" "AT1G73110" "AT1G73590" "AT1G73805" "AT1G73810" "AT1G73965" "AT1G74070"
## [533] "AT1G74080" "AT1G74100" "AT1G74360" "AT1G74370" "AT1G74670" "AT1G74710" "AT1G74730"
## [540] "AT1G74940" "AT1G75170" "AT1G75500" "AT1G75510" "AT1G75690" "AT1G75800" "AT1G75830"
## [547] "AT1G76040" "AT1G76070" "AT1G76240" "AT1G76590" "AT1G76610" "AT1G76650" "AT1G76760"
## [554] "AT1G76970" "AT1G76980" "AT1G77000" "AT1G77145" "AT1G77280" "AT1G77490" "AT1G77500"
## [561] "AT1G77630" "AT1G77885" "AT1G77890" "AT1G78020" "AT1G78060" "AT1G78190" "AT1G78380"
## [568] "AT1G78410" "AT1G78450" "AT1G78570" "AT1G78780" "AT1G78820" "AT1G78830" "AT1G78860"
## [575] "AT1G78995" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G80030" "AT1G80080" "AT1G80110"
## [582] "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450" "AT1G80520" "AT1G80530" "AT1G80580"
## [589] "AT1G80590" "AT1G80610" "AT1G80630" "AT1G80640" "AT1G80840" "AT2G01340" "AT2G01420"
## [596] "AT2G01540" "AT2G01590" "AT2G01630" "AT2G01650" "AT2G01818" "AT2G01990" "AT2G02020"
## [603] "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02390" "AT2G02780"
## [610] "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03270" "AT2G03420" "AT2G03750" "AT2G03760"
## [617] "AT2G04380" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04780" "AT2G04790"
## [624] "AT2G04900" "AT2G05160" "AT2G05320" "AT2G05630" "AT2G05790" "AT2G05940" "AT2G06255"
## [631] "AT2G07687" "AT2G13360" "AT2G13550" "AT2G13790" "AT2G13810" "AT2G13960" "AT2G14560"
## [638] "AT2G14880" "AT2G14890" "AT2G15760" "AT2G15860" "AT2G16060" "AT2G16630" "AT2G16700"
## [645] "AT2G16710" "AT2G16720" "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17230"
## [652] "AT2G17500" "AT2G17720" "AT2G17740" "AT2G18000" "AT2G18300" "AT2G18560" "AT2G18660"
## [659] "AT2G18690" "AT2G18969" "AT2G18970" "AT2G19170" "AT2G19620" "AT2G19690" "AT2G19710"
## [666] "AT2G20110" "AT2G20142" "AT2G20180" "AT2G20210" "AT2G20290" "AT2G20340" "AT2G20680"
## [673] "AT2G20890" "AT2G21080" "AT2G21140" "AT2G21188" "AT2G21330" "AT2G21470" "AT2G21780"
## [680] "AT2G21830" "AT2G21850" "AT2G22500" "AT2G22560" "AT2G22810" "AT2G22890" "AT2G23030"
## [687] "AT2G23100" "AT2G23110" "AT2G23130" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23600"
## [694] "AT2G23680" "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24060" "AT2G24090" "AT2G24150"
## [701] "AT2G24240" "AT2G24280" "AT2G24285" "AT2G24580" "AT2G24850" "AT2G25190" "AT2G25270"
## [708] "AT2G25460" "AT2G25520" "AT2G25625" "AT2G25737" "AT2G25840" "AT2G26080" "AT2G26250"
## [715] "AT2G26290" "AT2G26300" "AT2G26330" "AT2G26400" "AT2G26480" "AT2G26530" "AT2G26710"
## [722] "AT2G26870" "AT2G26900" "AT2G26910" "AT2G27040" "AT2G27060" "AT2G27130" "AT2G27190"
## [729] "AT2G27385" "AT2G27389" "AT2G27510" "AT2G27690" "AT2G27810" "AT2G27920" "AT2G28000"
## [736] "AT2G28040" "AT2G28110" "AT2G28400" "AT2G28570" "AT2G28790" "AT2G28810" "AT2G28890"
## [743] "AT2G28930" "AT2G28950" "AT2G29050" "AT2G29070" "AT2G29290" "AT2G29320" "AT2G29350"
## [750] "AT2G29400" "AT2G29460" "AT2G29470" "AT2G29480" "AT2G29550" "AT2G29630" "AT2G29720"
## [757] "AT2G29990" "AT2G30080" "AT2G30140" "AT2G30170" "AT2G30395" "AT2G30400" "AT2G30420"
## [764] "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31020" "AT2G31170" "AT2G31200" "AT2G31305"
## [771] "AT2G31390" "AT2G31570" "AT2G31790" "AT2G31865" "AT2G31870" "AT2G31902" "AT2G31945"
## [778] "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32160" "AT2G32179" "AT2G32180"
## [785] "AT2G32210" "AT2G32460" "AT2G32560" "AT2G32640" "AT2G33060" "AT2G33250" "AT2G33380"
## [792] "AT2G33520" "AT2G33570" "AT2G33860" "AT2G34070" "AT2G34180" "AT2G34490" "AT2G34500"
## [799] "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34680" "AT2G34930" "AT2G34940" "AT2G35130"
## [806] "AT2G35190" "AT2G35260" "AT2G35500" "AT2G35590" "AT2G35730" "AT2G35810" "AT2G35859"
## [813] "AT2G35860" "AT2G35940" "AT2G35960" "AT2G36050" "AT2G36640" "AT2G36830" "AT2G36990"
## [820] "AT2G37110" "AT2G37180" "AT2G37220" "AT2G37440" "AT2G37450" "AT2G37640" "AT2G37750"
## [827] "AT2G37760" "AT2G37870" "AT2G37950" "AT2G37980" "AT2G38050" "AT2G38080" "AT2G38120"
## [834] "AT2G38170" "AT2G38240" "AT2G38250" "AT2G38460" "AT2G38490" "AT2G38530" "AT2G38860"
## [841] "AT2G39110" "AT2G39130" "AT2G39140" "AT2G39190" "AT2G39210" "AT2G39320" "AT2G39470"
## [848] "AT2G39518" "AT2G39520" "AT2G39730" "AT2G40140" "AT2G40340" "AT2G40435" "AT2G40480"
## [855] "AT2G40540" "AT2G40610" "AT2G40690" "AT2G40815" "AT2G41070" "AT2G41100" "AT2G41380"
## [862] "AT2G41410" "AT2G41480" "AT2G41720" "AT2G41820" "AT2G41835" "AT2G42170" "AT2G42290"
## [869] "AT2G42300" "AT2G42320" "AT2G42350" "AT2G42380" "AT2G42560" "AT2G42940" "AT2G42950"
## [876] "AT2G43000" "AT2G43100" "AT2G43140" "AT2G43320" "AT2G43360" "AT2G43570" "AT2G44180"
## [883] "AT2G44230" "AT2G44578" "AT2G44600" "AT2G44740" "AT2G44920" "AT2G45170" "AT2G45210"
## [890] "AT2G45330" "AT2G45470" "AT2G45500" "AT2G45560" "AT2G45570" "AT2G45660" "AT2G45760"
## [897] "AT2G45770" "AT2G45850" "AT2G45960" "AT2G46250" "AT2G46270" "AT2G46430" "AT2G46510"
## [904] "AT2G46620" "AT2G46630" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46820" "AT2G46940"
## [911] "AT2G46980" "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47190" "AT2G47200" "AT2G47370"
## [918] "AT2G47440" "AT2G47560" "AT2G47590" "AT2G47820" "AT2G47840" "AT2G47930" "AT2G47940"
## [925] "AT2G47950" "AT3G01060" "AT3G01290" "AT3G01440" "AT3G01480" "AT3G01500" "AT3G01810"
## [932] "AT3G01840" "AT3G01970" "AT3G02050" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02730"
## [939] "AT3G02770" "AT3G02800" "AT3G03310" "AT3G03440" "AT3G03470" "AT3G03490" "AT3G03560"
## [946] "AT3G03610" "AT3G03650" "AT3G03780" "AT3G03980" "AT3G04000" "AT3G04060" "AT3G04070"
## [953] "AT3G04140" "AT3G04160" "AT3G04420" "AT3G04550" "AT3G04640" "AT3G05330" "AT3G05360"
## [960] "AT3G05390" "AT3G05500" "AT3G05830" "AT3G05870" "AT3G06145" "AT3G06320" "AT3G06420"
## [967] "AT3G06433" "AT3G06490" "AT3G06750" "AT3G06890" "AT3G07010" "AT3G07200" "AT3G07210"
## [974] "AT3G07320" "AT3G07370" "AT3G07460" "AT3G07540" "AT3G07700" "AT3G07720" "AT3G07870"
## [981] "AT3G08030" "AT3G08720" "AT3G08760" "AT3G08920" "AT3G08990" "AT3G09160" "AT3G09280"
## [988] "AT3G09490" "AT3G09580" "AT3G09780" "AT3G09800" "AT3G09830" "AT3G09910" "AT3G10010"
## [995] "AT3G10040" "AT3G10160" "AT3G10320" "AT3G10490" "AT3G10500" "AT3G10640"
## [ reached getOption("max.print") -- omitted 1226 entries ]
##
## $UporDown$`M12-V12`
## [1] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01430" "AT1G01470" "AT1G01480" "AT1G01560"
## [8] "AT1G01720" "AT1G02205" "AT1G02220" "AT1G02230" "AT1G02400" "AT1G02405" "AT1G02460"
## [15] "AT1G02650" "AT1G02750" "AT1G03130" "AT1G03300" "AT1G04310" "AT1G04730" "AT1G04780"
## [22] "AT1G05100" "AT1G05680" "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06160"
## [29] "AT1G06570" "AT1G06620" "AT1G06760" "AT1G07300" "AT1G07430" "AT1G07500" "AT1G07590"
## [36] "AT1G07600" "AT1G07610" "AT1G07670" "AT1G08050" "AT1G08300" "AT1G08900" "AT1G08920"
## [43] "AT1G09200" "AT1G09440" "AT1G09530" "AT1G09950" "AT1G10020" "AT1G10230" "AT1G10410"
## [50] "AT1G10530" "AT1G10560" "AT1G10585" "AT1G10657" "AT1G10910" "AT1G10990" "AT1G11000"
## [57] "AT1G11350" "AT1G11380" "AT1G11400" "AT1G11480" "AT1G12320" "AT1G12420" "AT1G12540"
## [64] "AT1G13280" "AT1G13330" "AT1G13340" "AT1G13700" "AT1G13740" "AT1G13920" "AT1G13930"
## [71] "AT1G13990" "AT1G14070" "AT1G14120" "AT1G14440" "AT1G14700" "AT1G15100" "AT1G15110"
## [78] "AT1G15125" "AT1G15405" "AT1G15415" "AT1G15420" "AT1G15430" "AT1G15670" "AT1G15890"
## [85] "AT1G15980" "AT1G15990" "AT1G16300" "AT1G16850" "AT1G17380" "AT1G17420" "AT1G17500"
## [92] "AT1G17550" "AT1G17750" "AT1G17940" "AT1G17990" "AT1G18000" "AT1G18010" "AT1G18090"
## [99] "AT1G18620" "AT1G19160" "AT1G19180" "AT1G19270" "AT1G19490" "AT1G19620" "AT1G19640"
## [106] "AT1G19650" "AT1G19670" "AT1G19680" "AT1G20030" "AT1G20070" "AT1G20310" "AT1G20450"
## [113] "AT1G20970" "AT1G21000" "AT1G21050" "AT1G21120" "AT1G21130" "AT1G21520" "AT1G21550"
## [120] "AT1G21580" "AT1G21920" "AT1G22370" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22770"
## [127] "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23120" "AT1G23200" "AT1G23480"
## [134] "AT1G23850" "AT1G24147" "AT1G25422" "AT1G25425" "AT1G25440" "AT1G25450" "AT1G25500"
## [141] "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26800" "AT1G26920" "AT1G26930" "AT1G27300"
## [148] "AT1G27420" "AT1G27480" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050" "AT1G28360"
## [155] "AT1G28370" "AT1G28400" "AT1G28480" "AT1G29195" "AT1G29290" "AT1G29330" "AT1G29430"
## [162] "AT1G29450" "AT1G29460" "AT1G29500" "AT1G29600" "AT1G29660" "AT1G29715" "AT1G30040"
## [169] "AT1G30135" "AT1G30240" "AT1G30320" "AT1G30620" "AT1G30814" "AT1G30850" "AT1G31120"
## [176] "AT1G31173" "AT1G31290" "AT1G31820" "AT1G31900" "AT1G32560" "AT1G32640" "AT1G32870"
## [183] "AT1G32910" "AT1G33055" "AT1G33110" "AT1G33600" "AT1G33811" "AT1G34180" "AT1G34420"
## [190] "AT1G35210" "AT1G42980" "AT1G43160" "AT1G43245" "AT1G43710" "AT1G43910" "AT1G44170"
## [197] "AT1G44350" "AT1G45145" "AT1G47510" "AT1G48000" "AT1G48100" "AT1G48315" "AT1G48320"
## [204] "AT1G48370" "AT1G48780" "AT1G49050" "AT1G49450" "AT1G49520" "AT1G50260" "AT1G50640"
## [211] "AT1G51140" "AT1G51760" "AT1G51780" "AT1G51850" "AT1G51920" "AT1G51940" "AT1G52030"
## [218] "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52720" "AT1G52760" "AT1G52890" "AT1G53320"
## [225] "AT1G53560" "AT1G53620" "AT1G53625" "AT1G53760" "AT1G53830" "AT1G54030" "AT1G54095"
## [232] "AT1G54100" "AT1G54120" "AT1G54570" "AT1G54730" "AT1G54820" "AT1G54890" "AT1G55330"
## [239] "AT1G55370" "AT1G56580" "AT1G56720" "AT1G57610" "AT1G57630" "AT1G58270" "AT1G58360"
## [246] "AT1G59640" "AT1G59740" "AT1G60190" "AT1G60270" "AT1G60860" "AT1G61065" "AT1G61110"
## [253] "AT1G61140" "AT1G61190" "AT1G61215" "AT1G61240" "AT1G61300" "AT1G61340" "AT1G61500"
## [260] "AT1G61610" "AT1G61640" "AT1G61795" "AT1G61890" "AT1G62520" "AT1G62790" "AT1G62840"
## [267] "AT1G62910" "AT1G63260" "AT1G63400" "AT1G63880" "AT1G64380" "AT1G64610" "AT1G64620"
## [274] "AT1G64660" "AT1G64670" "AT1G65610" "AT1G66170" "AT1G66280" "AT1G66550" "AT1G66590"
## [281] "AT1G66600" "AT1G66725" "AT1G66780" "AT1G66920" "AT1G66940" "AT1G67420" "AT1G68190"
## [288] "AT1G68250" "AT1G68340" "AT1G68390" "AT1G68500" "AT1G68520" "AT1G68840" "AT1G68940"
## [295] "AT1G69260" "AT1G69480" "AT1G69600" "AT1G69610" "AT1G69870" "AT1G70100" "AT1G70300"
## [302] "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700" "AT1G70800" "AT1G70810" "AT1G70940"
## [309] "AT1G71100" "AT1G71690" "AT1G71697" "AT1G71970" "AT1G72120" "AT1G72210" "AT1G72240"
## [316] "AT1G72330" "AT1G72416" "AT1G72430" "AT1G72520" "AT1G72600" "AT1G72610" "AT1G72645"
## [323] "AT1G72680" "AT1G72690" "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940"
## [330] "AT1G73110" "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73805" "AT1G74080" "AT1G74100"
## [337] "AT1G74710" "AT1G74940" "AT1G74950" "AT1G75370" "AT1G75400" "AT1G75440" "AT1G75450"
## [344] "AT1G75580" "AT1G76070" "AT1G76100" "AT1G76180" "AT1G76240" "AT1G76380" "AT1G76590"
## [351] "AT1G76640" "AT1G76650" "AT1G76980" "AT1G77210" "AT1G77280" "AT1G77450" "AT1G77500"
## [358] "AT1G77680" "AT1G77885" "AT1G77890" "AT1G77990" "AT1G78070" "AT1G78080" "AT1G78210"
## [365] "AT1G78265" "AT1G78270" "AT1G78570" "AT1G78820" "AT1G78830" "AT1G79270" "AT1G79400"
## [372] "AT1G79520" "AT1G79570" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [379] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630" "AT1G80820" "AT1G80840" "AT1G80850"
## [386] "AT2G01340" "AT2G01420" "AT2G01450" "AT2G01630" "AT2G01860" "AT2G01890" "AT2G02020"
## [393] "AT2G02310" "AT2G02340" "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03470" "AT2G03750"
## [400] "AT2G03760" "AT2G03980" "AT2G05160" "AT2G05260" "AT2G06050" "AT2G06255" "AT2G07680"
## [407] "AT2G13650" "AT2G13960" "AT2G14050" "AT2G14290" "AT2G15760" "AT2G15880" "AT2G16720"
## [414] "AT2G17230" "AT2G17500" "AT2G17720" "AT2G17740" "AT2G17880" "AT2G18090" "AT2G18196"
## [421] "AT2G18300" "AT2G18560" "AT2G18890" "AT2G20180" "AT2G20880" "AT2G20950" "AT2G21780"
## [428] "AT2G22200" "AT2G22330" "AT2G22500" "AT2G22770" "AT2G22810" "AT2G22890" "AT2G23100"
## [435] "AT2G23110" "AT2G23340" "AT2G23450" "AT2G23600" "AT2G23760" "AT2G24210" "AT2G24280"
## [442] "AT2G24850" "AT2G25130" "AT2G25460" "AT2G25470" "AT2G25625" "AT2G26480" "AT2G26530"
## [449] "AT2G26710" "AT2G27310" "AT2G27500" "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28120"
## [456] "AT2G28400" "AT2G28460" "AT2G28570" "AT2G28720" "AT2G28740" "AT2G29290" "AT2G29320"
## [463] "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29670" "AT2G30020" "AT2G30040" "AT2G30140"
## [470] "AT2G30360" "AT2G30362" "AT2G30395" "AT2G30400" "AT2G30540" "AT2G30550" "AT2G30720"
## [477] "AT2G30820" "AT2G30830" "AT2G30930" "AT2G31150" "AT2G31180" "AT2G32100" "AT2G32130"
## [484] "AT2G32140" "AT2G32150" "AT2G32235" "AT2G32510" "AT2G32990" "AT2G33050" "AT2G33051"
## [491] "AT2G33060" "AT2G33380" "AT2G34010" "AT2G34070" "AT2G34080" "AT2G34500" "AT2G34600"
## [498] "AT2G34620" "AT2G35170" "AT2G35260" "AT2G35550" "AT2G35590" "AT2G35710" "AT2G35730"
## [505] "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36050" "AT2G36380" "AT2G36590" "AT2G36640"
## [512] "AT2G36815" "AT2G36830" "AT2G36854" "AT2G37170" "AT2G37180" "AT2G37450" "AT2G37750"
## [519] "AT2G37760" "AT2G37770" "AT2G37870" "AT2G37950" "AT2G37980" "AT2G38240" "AT2G38250"
## [526] "AT2G38490" "AT2G38500" "AT2G38640" "AT2G38750" "AT2G38760" "AT2G39030" "AT2G39210"
## [533] "AT2G39250" "AT2G39350" "AT2G39520" "AT2G39580" "AT2G39800" "AT2G39980" "AT2G40100"
## [540] "AT2G40140" "AT2G40435" "AT2G40610" "AT2G40620" "AT2G40850" "AT2G41410" "AT2G41540"
## [547] "AT2G41730" "AT2G41870" "AT2G42150" "AT2G42170" "AT2G42320" "AT2G42380" "AT2G42530"
## [554] "AT2G42560" "AT2G42690" "AT2G42760" "AT2G43018" "AT2G43020" "AT2G43320" "AT2G43535"
## [561] "AT2G44380" "AT2G44578" "AT2G44600" "AT2G44740" "AT2G44840" "AT2G45210" "AT2G45760"
## [568] "AT2G45850" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46510" "AT2G46520" "AT2G46670"
## [575] "AT2G46680" "AT2G46790" "AT2G47000" "AT2G47140" "AT2G47180" "AT2G47260" "AT2G47440"
## [582] "AT2G47560" "AT2G47770" "AT2G47950" "AT3G01280" "AT3G01480" "AT3G02140" "AT3G02150"
## [589] "AT3G02160" "AT3G02510" "AT3G02875" "AT3G02990" "AT3G03310" "AT3G03440" "AT3G03820"
## [596] "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060" "AT3G04160" "AT3G04420" "AT3G04630"
## [603] "AT3G04720" "AT3G04960" "AT3G05330" "AT3G05380" "AT3G05640" "AT3G05800" "AT3G05810"
## [610] "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06070" "AT3G06420" "AT3G06490" "AT3G06500"
## [617] "AT3G06890" "AT3G07010" "AT3G07460" "AT3G07540" "AT3G07700" "AT3G07870" "AT3G08720"
## [624] "AT3G08990" "AT3G09032" "AT3G09370" "AT3G09830" "AT3G09910" "AT3G09940" "AT3G10120"
## [631] "AT3G10520" "AT3G10815" "AT3G10985" "AT3G11210" "AT3G11330" "AT3G11340" "AT3G11410"
## [638] "AT3G11420" "AT3G11450" "AT3G11470" "AT3G11480" "AT3G11580" "AT3G11840" "AT3G12320"
## [645] "AT3G12610" "AT3G12830" "AT3G12920" "AT3G13000" "AT3G13062" "AT3G13080" "AT3G13437"
## [652] "AT3G13730" "AT3G13910" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14560" "AT3G14840"
## [659] "AT3G14870" "AT3G15210" "AT3G15356" "AT3G15500" "AT3G15534" "AT3G15570" "AT3G15760"
## [666] "AT3G16250" "AT3G16330" "AT3G16400" "AT3G16450" "AT3G16460" "AT3G16500" "AT3G16520"
## [673] "AT3G16530" "AT3G16620" "AT3G16990" "AT3G17000" "AT3G17120" "AT3G17510" "AT3G17690"
## [680] "AT3G17800" "AT3G17810" "AT3G17860" "AT3G17910" "AT3G18035" "AT3G18050" "AT3G18295"
## [687] "AT3G18730" "AT3G18773" "AT3G19270" "AT3G19380" "AT3G19580" "AT3G19680" "AT3G19850"
## [694] "AT3G19970" "AT3G20350" "AT3G20820" "AT3G21060" "AT3G21660" "AT3G21670" "AT3G21700"
## [701] "AT3G21890" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G22370" "AT3G22415" "AT3G22460"
## [708] "AT3G22560" "AT3G22910" "AT3G22968" "AT3G22970" "AT3G23880" "AT3G24518" "AT3G24520"
## [715] "AT3G25250" "AT3G25570" "AT3G25572" "AT3G25717" "AT3G25760" "AT3G25770" "AT3G25780"
## [722] "AT3G25890" "AT3G25910" "AT3G26320" "AT3G26510" "AT3G26690" "AT3G26830" "AT3G26840"
## [729] "AT3G26890" "AT3G26932" "AT3G27170" "AT3G27210" "AT3G27415" "AT3G27416" "AT3G27809"
## [736] "AT3G27810" "AT3G27870" "AT3G27960" "AT3G28007" "AT3G28040" "AT3G28580" "AT3G28600"
## [743] "AT3G28860" "AT3G29250" "AT3G29575" "AT3G29670" "AT3G30380" "AT3G30720" "AT3G42670"
## [750] "AT3G43250" "AT3G43270" "AT3G43440" "AT3G44260" "AT3G44717" "AT3G44720" "AT3G44830"
## [757] "AT3G44860" "AT3G44870" "AT3G45040" "AT3G45130" "AT3G45290" "AT3G45940" "AT3G46080"
## [764] "AT3G46320" "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46668" "AT3G46670" "AT3G47420"
## [771] "AT3G47500" "AT3G47540" "AT3G47730" "AT3G47750" "AT3G47960" "AT3G48200" "AT3G48240"
## [778] "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520" "AT3G48660" "AT3G48870"
## [785] "AT3G49400" "AT3G49870" "AT3G50120" "AT3G50260" "AT3G50310" "AT3G50410" "AT3G50620"
## [792] "AT3G50650" "AT3G50760" "AT3G50840" "AT3G50910" "AT3G51090" "AT3G51450" "AT3G52100"
## [799] "AT3G52310" "AT3G52720" "AT3G52740" "AT3G52770" "AT3G52870" "AT3G53232" "AT3G54320"
## [806] "AT3G54820" "AT3G54950" "AT3G55060" "AT3G55090" "AT3G55290" "AT3G55500" "AT3G55640"
## [813] "AT3G55880" "AT3G55970" "AT3G56160" "AT3G56260" "AT3G56400" "AT3G56891" "AT3G57010"
## [820] "AT3G57020" "AT3G57157" "AT3G57450" "AT3G57480" "AT3G57520" "AT3G57540" "AT3G57760"
## [827] "AT3G57880" "AT3G58120" "AT3G58620" "AT3G58795" "AT3G59050" "AT3G59052" "AT3G59550"
## [834] "AT3G59710" "AT3G59780" "AT3G59800" "AT3G59900" "AT3G60160" "AT3G60180" "AT3G60320"
## [841] "AT3G60420" "AT3G60450" "AT3G60490" "AT3G60966" "AT3G61190" "AT3G61420" "AT3G61430"
## [848] "AT3G61630" "AT3G61890" "AT3G61900" "AT3G61920" "AT3G62150" "AT3G62750" "AT3G63010"
## [855] "AT3G63060" "AT4G00430" "AT4G00950" "AT4G01026" "AT4G01030" "AT4G01330" "AT4G01460"
## [862] "AT4G01540" "AT4G01850" "AT4G01895" "AT4G02075" "AT4G02220" "AT4G02360" "AT4G02380"
## [869] "AT4G02540" "AT4G02900" "AT4G03140" "AT4G03320" "AT4G04223" "AT4G05010" "AT4G05020"
## [876] "AT4G05100" "AT4G06534" "AT4G06744" "AT4G07950" "AT4G08170" "AT4G08555" "AT4G08870"
## [883] "AT4G09460" "AT4G10290" "AT4G10390" "AT4G11140" "AT4G12000" "AT4G12005" "AT4G12040"
## [890] "AT4G12390" "AT4G12410" "AT4G12420" "AT4G12480" "AT4G12710" "AT4G12720" "AT4G12735"
## [897] "AT4G13110" "AT4G13495" "AT4G13860" "AT4G14750" "AT4G15100" "AT4G15200" "AT4G15248"
## [904] "AT4G15280" "AT4G15540" "AT4G15770" "AT4G15940" "AT4G16730" "AT4G16740" "AT4G16760"
## [911] "AT4G17460" "AT4G17810" "AT4G18160" "AT4G18170" "AT4G18197" "AT4G18205" "AT4G18360"
## [918] "AT4G18380" "AT4G18670" "AT4G18760" "AT4G18950" "AT4G19170" "AT4G19420" "AT4G19530"
## [925] "AT4G19870" "AT4G20260" "AT4G20830" "AT4G21060" "AT4G21200" "AT4G21215" "AT4G21440"
## [932] "AT4G21570" "AT4G21680" "AT4G21780" "AT4G21790" "AT4G21830" "AT4G21850" "AT4G21870"
## [939] "AT4G22070" "AT4G22560" "AT4G22590" "AT4G22592" "AT4G22620" "AT4G22690" "AT4G22710"
## [946] "AT4G23050" "AT4G23060" "AT4G23290" "AT4G23450" "AT4G24040" "AT4G24110" "AT4G24340"
## [953] "AT4G24380" "AT4G24570" "AT4G24960" "AT4G25390" "AT4G25433" "AT4G25480" "AT4G25670"
## [960] "AT4G25672" "AT4G25690" "AT4G25692" "AT4G26060" "AT4G26080" "AT4G26470" "AT4G27300"
## [967] "AT4G27350" "AT4G27410" "AT4G27440" "AT4G27730" "AT4G27830" "AT4G27860" "AT4G28088"
## [974] "AT4G28140" "AT4G28162" "AT4G28290" "AT4G28300" "AT4G28350" "AT4G29310" "AT4G29740"
## [981] "AT4G29930" "AT4G29950" "AT4G30110" "AT4G30180" "AT4G30410" "AT4G30470" "AT4G30530"
## [988] "AT4G31330" "AT4G31780" "AT4G31800" "AT4G31870" "AT4G32280" "AT4G32400" "AT4G32450"
## [995] "AT4G33050" "AT4G33467" "AT4G33560" "AT4G33666" "AT4G34200" "AT4G34588"
## [ reached getOption("max.print") -- omitted 352 entries ]
##
## $UporDown$`A12-V12`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" "AT1G01610" "AT1G01620" "AT1G01720"
## [8] "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02310" "AT1G02405" "AT1G02460" "AT1G02470"
## [15] "AT1G02920" "AT1G03210" "AT1G03850" "AT1G07610" "AT1G08200" "AT1G08450" "AT1G08630"
## [22] "AT1G09200" "AT1G09950" "AT1G10070" "AT1G10370" "AT1G10530" "AT1G10560" "AT1G11720"
## [29] "AT1G13920" "AT1G13930" "AT1G14120" "AT1G15890" "AT1G16410" "AT1G16850" "AT1G17020"
## [36] "AT1G17420" "AT1G17940" "AT1G17990" "AT1G19570" "AT1G19640" "AT1G19650" "AT1G19670"
## [43] "AT1G20030" "AT1G20070" "AT1G20450" "AT1G21120" "AT1G21520" "AT1G21740" "AT1G22550"
## [50] "AT1G22770" "AT1G25422" "AT1G25450" "AT1G25500" "AT1G26290" "AT1G26380" "AT1G26420"
## [57] "AT1G26730" "AT1G26770" "AT1G26920" "AT1G27030" "AT1G27330" "AT1G27730" "AT1G28010"
## [64] "AT1G29330" "AT1G30240" "AT1G31710" "AT1G32860" "AT1G32910" "AT1G33950" "AT1G34210"
## [71] "AT1G35670" "AT1G36622" "AT1G47890" "AT1G49650" "AT1G50520" "AT1G50640" "AT1G51500"
## [78] "AT1G51780" "AT1G51860" "AT1G51920" "AT1G52030" "AT1G52200" "AT1G52720" "AT1G53110"
## [85] "AT1G53620" "AT1G54030" "AT1G54040" "AT1G54095" "AT1G55260" "AT1G56010" "AT1G56120"
## [92] "AT1G56580" "AT1G58270" "AT1G58590" "AT1G60190" "AT1G60270" "AT1G61110" "AT1G61340"
## [99] "AT1G61810" "AT1G63460" "AT1G64380" "AT1G64390" "AT1G64620" "AT1G64670" "AT1G65470"
## [106] "AT1G65860" "AT1G66280" "AT1G66960" "AT1G67420" "AT1G67520" "AT1G69140" "AT1G69530"
## [113] "AT1G69600" "AT1G70300" "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72140" "AT1G73390"
## [120] "AT1G73500" "AT1G74370" "AT1G75370" "AT1G75580" "AT1G76790" "AT1G77145" "AT1G77680"
## [127] "AT1G78070" "AT1G79570" "AT1G80120" "AT1G80820" "AT1G80840" "AT1G80850" "AT2G01830"
## [134] "AT2G02360" "AT2G02930" "AT2G03760" "AT2G04080" "AT2G06255" "AT2G07690" "AT2G18969"
## [141] "AT2G18970" "AT2G20880" "AT2G22200" "AT2G22330" "AT2G23130" "AT2G23170" "AT2G23340"
## [148] "AT2G23760" "AT2G24040" "AT2G24210" "AT2G24240" "AT2G24390" "AT2G25130" "AT2G27510"
## [155] "AT2G27820" "AT2G27920" "AT2G28110" "AT2G29350" "AT2G29440" "AT2G29670" "AT2G29950"
## [162] "AT2G30360" "AT2G30362" "AT2G30820" "AT2G30830" "AT2G32160" "AT2G32235" "AT2G32240"
## [169] "AT2G32510" "AT2G32990" "AT2G34070" "AT2G36380" "AT2G36590" "AT2G36815" "AT2G36830"
## [176] "AT2G36885" "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37620" "AT2G37750" "AT2G38530"
## [183] "AT2G38540" "AT2G38750" "AT2G39020" "AT2G39250" "AT2G39320" "AT2G40110" "AT2G40550"
## [190] "AT2G41250" "AT2G41440" "AT2G41540" "AT2G41730" "AT2G42530" "AT2G42540" "AT2G43150"
## [197] "AT2G43535" "AT2G43550" "AT2G44578" "AT2G44640" "AT2G44840" "AT2G44980" "AT2G45960"
## [204] "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260" "AT2G47485" "AT2G47840" "AT2G47950"
## [211] "AT3G02510" "AT3G03190" "AT3G03470" "AT3G03650" "AT3G03980" "AT3G04000" "AT3G04010"
## [218] "AT3G04070" "AT3G04630" "AT3G05640" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G07320"
## [225] "AT3G08670" "AT3G09032" "AT3G10320" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [232] "AT3G12145" "AT3G12920" "AT3G13437" "AT3G14280" "AT3G14870" "AT3G15210" "AT3G15518"
## [239] "AT3G15800" "AT3G16450" "AT3G16460" "AT3G16500" "AT3G17510" "AT3G17860" "AT3G18250"
## [246] "AT3G18730" "AT3G19390" "AT3G19720" "AT3G21670" "AT3G21780" "AT3G22460" "AT3G22560"
## [253] "AT3G24518" "AT3G24520" "AT3G25760" "AT3G25770" "AT3G25780" "AT3G26220" "AT3G26230"
## [260] "AT3G27170" "AT3G27180" "AT3G27960" "AT3G28950" "AT3G43250" "AT3G43270" "AT3G44300"
## [267] "AT3G46658" "AT3G46660" "AT3G47750" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48490"
## [274] "AT3G49870" "AT3G50410" "AT3G50620" "AT3G51250" "AT3G51660" "AT3G51750" "AT3G52290"
## [281] "AT3G52630" "AT3G53420" "AT3G54820" "AT3G54830" "AT3G54920" "AT3G54950" "AT3G55290"
## [288] "AT3G56260" "AT3G57550" "AT3G57760" "AT3G59050" "AT3G59052" "AT3G59100" "AT3G59710"
## [295] "AT3G59970" "AT3G60540" "AT3G61198" "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61630"
## [302] "AT3G61920" "AT3G62590" "AT3G62600" "AT3G62700" "AT3G63200" "AT4G00400" "AT4G00430"
## [309] "AT4G01026" "AT4G01030" "AT4G02050" "AT4G02110" "AT4G02360" "AT4G02520" "AT4G04620"
## [316] "AT4G04740" "AT4G05010" "AT4G05100" "AT4G06534" "AT4G06744" "AT4G08170" "AT4G08870"
## [323] "AT4G10290" "AT4G10390" "AT4G10860" "AT4G12000" "AT4G12030" "AT4G13860" "AT4G14020"
## [330] "AT4G14040" "AT4G14440" "AT4G15210" "AT4G15610" "AT4G15770" "AT4G16740" "AT4G17340"
## [337] "AT4G18440" "AT4G19370" "AT4G19870" "AT4G21570" "AT4G21610" "AT4G22010" "AT4G22620"
## [344] "AT4G23060" "AT4G23420" "AT4G23500" "AT4G23600" "AT4G24510" "AT4G25433" "AT4G26700"
## [351] "AT4G27350" "AT4G27520" "AT4G27745" "AT4G28140" "AT4G28390" "AT4G29740" "AT4G30180"
## [358] "AT4G31780" "AT4G31870" "AT4G33220" "AT4G33355" "AT4G33467" "AT4G34650" "AT4G35320"
## [365] "AT4G35550" "AT4G35560" "AT4G35720" "AT4G36010" "AT4G36780" "AT4G36900" "AT4G37310"
## [372] "AT4G37390" "AT4G37520" "AT4G37760" "AT4G37990" "AT4G38080" "AT4G38160" "AT4G38810"
## [379] "AT4G39330" "AT4G39350" "AT4G39980" "AT5G01210" "AT5G01215" "AT5G01610" "AT5G01840"
## [386] "AT5G03030" "AT5G04180" "AT5G04770" "AT5G06980" "AT5G07690" "AT5G07820" "AT5G08640"
## [393] "AT5G08760" "AT5G09290" "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10390" "AT5G10400"
## [400] "AT5G10440" "AT5G13220" "AT5G14200" "AT5G14420" "AT5G14565" "AT5G14570" "AT5G14700"
## [407] "AT5G15190" "AT5G15240" "AT5G15860" "AT5G15870" "AT5G15960" "AT5G16290" "AT5G17490"
## [414] "AT5G19100" "AT5G19110" "AT5G20270" "AT5G21280" "AT5G22740" "AT5G23820" "AT5G24030"
## [421] "AT5G24080" "AT5G24150" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780" "AT5G24910"
## [428] "AT5G25450" "AT5G26260" "AT5G27150" "AT5G27930" "AT5G28646" "AT5G37740" "AT5G39320"
## [435] "AT5G39520" "AT5G40010" "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G40690"
## [442] "AT5G41120" "AT5G41315" "AT5G41600" "AT5G42530" "AT5G42900" "AT5G44050" "AT5G47220"
## [449] "AT5G47240" "AT5G49690" "AT5G52050" "AT5G52310" "AT5G52882" "AT5G52910" "AT5G52990"
## [456] "AT5G53200" "AT5G53760" "AT5G55090" "AT5G55180" "AT5G56760" "AT5G56870" "AT5G56880"
## [463] "AT5G57100" "AT5G57260" "AT5G57550" "AT5G57800" "AT5G59030" "AT5G59050" "AT5G59340"
## [470] "AT5G59480" "AT5G59530" "AT5G60850" "AT5G60860" "AT5G60890" "AT5G61070" "AT5G61160"
## [477] "AT5G61810" "AT5G61890" "AT5G62360" "AT5G62470" "AT5G62700" "AT5G63240" "AT5G63450"
## [484] "AT5G64170" "AT5G64260" "AT5G64280" "AT5G64700" "AT5G64750" "AT5G65360" "AT5G65660"
## [491] "AT5G66052" "AT5G66053" "AT5G66170" "AT5G67070" "AT5G67180" "AT5G67190" "AT5G67210"
## [498] "AT5G67480" "AT5G67600"
##
##
## $Up
## $Up$`M1-A1`
## [1] "AT3G21870" "ATCG01310"
##
## $Up$`M1-V1`
## [1] "AT1G01060" "AT1G02710" "AT1G02820" "AT1G03055" "AT1G03360" "AT1G04250" "AT1G04530"
## [8] "AT1G04550" "AT1G04770" "AT1G07010" "AT1G07180" "AT1G09180" "AT1G09900" "AT1G10960"
## [15] "AT1G13030" "AT1G13800" "AT1G14150" "AT1G14840" "AT1G15290" "AT1G15510" "AT1G16350"
## [22] "AT1G16730" "AT1G17050" "AT1G18800" "AT1G19140" "AT1G21500" "AT1G22850" "AT1G23100"
## [29] "AT1G23740" "AT1G24148" "AT1G26220" "AT1G26761" "AT1G27480" "AT1G28010" "AT1G29600"
## [36] "AT1G31920" "AT1G32440" "AT1G32760" "AT1G33410" "AT1G42550" "AT1G44000" "AT1G44446"
## [43] "AT1G48100" "AT1G48570" "AT1G49490" "AT1G50840" "AT1G51310" "AT1G52830" "AT1G55260"
## [50] "AT1G55960" "AT1G58520" "AT1G62170" "AT1G62180" "AT1G62630" "AT1G62750" "AT1G62760"
## [57] "AT1G64500" "AT1G64600" "AT1G64670" "AT1G64770" "AT1G64880" "AT1G64900" "AT1G64970"
## [64] "AT1G65490" "AT1G66130" "AT1G66540" "AT1G67590" "AT1G68440" "AT1G69200" "AT1G70000"
## [71] "AT1G70580" "AT1G72040" "AT1G72645" "AT1G73870" "AT1G74070" "AT1G75100" "AT1G75280"
## [78] "AT1G76240" "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT2G04030" "AT2G04039"
## [85] "AT2G11890" "AT2G15020" "AT2G17972" "AT2G18330" "AT2G18560" "AT2G19670" "AT2G20020"
## [92] "AT2G21320" "AT2G21330" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24540" "AT2G24545"
## [99] "AT2G24580" "AT2G24762" "AT2G25680" "AT2G26080" "AT2G30100" "AT2G30150" "AT2G31380"
## [106] "AT2G31750" "AT2G32530" "AT2G32540" "AT2G33855" "AT2G35950" "AT2G37630" "AT2G37970"
## [113] "AT2G38750" "AT2G41250" "AT2G41290" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43650"
## [120] "AT2G46790" "AT2G46830" "AT2G47370" "AT2G47450" "AT2G47485" "AT3G01060" "AT3G01180"
## [127] "AT3G06145" "AT3G06520" "AT3G07310" "AT3G07770" "AT3G09600" "AT3G09650" "AT3G10040"
## [134] "AT3G11090" "AT3G11110" "AT3G13470" "AT3G14900" "AT3G15354" "AT3G16520" "AT3G17170"
## [141] "AT3G17640" "AT3G18750" "AT3G19450" "AT3G19480" "AT3G21890" "AT3G22121" "AT3G22150"
## [148] "AT3G24170" "AT3G24190" "AT3G24460" "AT3G26570" "AT3G27350" "AT3G28040" "AT3G43960"
## [155] "AT3G47070" "AT3G47420" "AT3G47430" "AT3G48280" "AT3G49240" "AT3G49470" "AT3G50685"
## [162] "AT3G51750" "AT3G51895" "AT3G52720" "AT3G53830" "AT3G54490" "AT3G54500" "AT3G54720"
## [169] "AT3G56290" "AT3G57020" "AT3G57180" "AT3G57190" "AT3G58990" "AT3G59250" "AT3G59400"
## [176] "AT3G61220" "AT3G61780" "AT3G63200" "AT4G00050" "AT4G01037" "AT4G02990" "AT4G09350"
## [183] "AT4G10120" "AT4G10620" "AT4G11100" "AT4G11175" "AT4G12390" "AT4G12830" "AT4G14690"
## [190] "AT4G15248" "AT4G15810" "AT4G16400" "AT4G16410" "AT4G19170" "AT4G21880" "AT4G23680"
## [197] "AT4G24700" "AT4G25290" "AT4G25780" "AT4G26600" "AT4G26850" "AT4G27030" "AT4G28730"
## [204] "AT4G28740" "AT4G28780" "AT4G30470" "AT4G30610" "AT4G31210" "AT4G31390" "AT4G32770"
## [211] "AT4G34550" "AT4G34610" "AT4G35090" "AT4G36950" "AT4G37650" "AT4G37800" "AT4G37925"
## [218] "AT4G38060" "AT4G39470" "AT5G01015" "AT5G01410" "AT5G02540" "AT5G02830" "AT5G03555"
## [225] "AT5G05580" "AT5G06790" "AT5G08610" "AT5G08720" "AT5G08760" "AT5G09760" "AT5G10470"
## [232] "AT5G12080" "AT5G12110" "AT5G15600" "AT5G17170" "AT5G17300" "AT5G18670" "AT5G19730"
## [239] "AT5G19850" "AT5G20220" "AT5G20380" "AT5G21100" "AT5G22390" "AT5G23730" "AT5G23750"
## [246] "AT5G23760" "AT5G24120" "AT5G24150" "AT5G24280" "AT5G24380" "AT5G24850" "AT5G25630"
## [253] "AT5G28500" "AT5G38430" "AT5G39710" "AT5G43630" "AT5G43850" "AT5G44190" "AT5G45800"
## [260] "AT5G46580" "AT5G48030" "AT5G49740" "AT5G50100" "AT5G51720" "AT5G52570" "AT5G53200"
## [267] "AT5G54130" "AT5G54610" "AT5G55570" "AT5G55740" "AT5G55790" "AT5G56850" "AT5G58770"
## [274] "AT5G58870" "AT5G59780" "AT5G61030" "AT5G61130" "AT5G61350" "AT5G61670" "AT5G62140"
## [281] "AT5G63630" "AT5G63700" "AT5G64840" "AT5G64940" "AT5G65380" "AT5G66740" "AT5G66960"
## [288] "AT5G67370" "ATCG00930" "ATCG00940" "ATCG01300" "ATCG01310"
##
## $Up$`A1-V1`
## [1] "AT1G64500" "AT2G24762" "AT3G09600"
##
## $Up$`M6-A6`
## [1] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02610" "AT1G03020" "AT1G03130" "AT1G03610"
## [8] "AT1G03630" "AT1G04770" "AT1G06040" "AT1G06460" "AT1G07050" "AT1G07280" "AT1G07440"
## [15] "AT1G08550" "AT1G09310" "AT1G10020" "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960"
## [22] "AT1G11180" "AT1G11260" "AT1G11362" "AT1G12090" "AT1G12450" "AT1G12500" "AT1G12710"
## [29] "AT1G12730" "AT1G13245" "AT1G13650" "AT1G13700" "AT1G13930" "AT1G14030" "AT1G14150"
## [36] "AT1G14345" "AT1G14700" "AT1G14720" "AT1G15160" "AT1G15290" "AT1G15820" "AT1G15980"
## [43] "AT1G16080" "AT1G16400" "AT1G16410" "AT1G16720" "AT1G17100" "AT1G17850" "AT1G17970"
## [50] "AT1G18000" "AT1G18010" "AT1G18265" "AT1G18330" "AT1G19150" "AT1G19510" "AT1G19715"
## [57] "AT1G19720" "AT1G20020" "AT1G20030" "AT1G21910" "AT1G22190" "AT1G22360" "AT1G22370"
## [64] "AT1G22380" "AT1G22490" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590" "AT1G22630"
## [71] "AT1G22690" "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23205" "AT1G23390" "AT1G23400"
## [78] "AT1G23740" "AT1G25400" "AT1G25450" "AT1G26230" "AT1G26761" "AT1G26800" "AT1G27480"
## [85] "AT1G27950" "AT1G28010" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29530" "AT1G29670"
## [92] "AT1G30520" "AT1G31173" "AT1G32060" "AT1G32080" "AT1G33170" "AT1G35140" "AT1G36370"
## [99] "AT1G43670" "AT1G44000" "AT1G44446" "AT1G47370" "AT1G48030" "AT1G49380" "AT1G49490"
## [106] "AT1G49650" "AT1G49975" "AT1G49990" "AT1G50040" "AT1G50590" "AT1G51400" "AT1G51402"
## [113] "AT1G51805" "AT1G51940" "AT1G52342" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G55330"
## [120] "AT1G55370" "AT1G55480" "AT1G60160" "AT1G60690" "AT1G60800" "AT1G61300" "AT1G62180"
## [127] "AT1G62560" "AT1G62630" "AT1G63090" "AT1G63570" "AT1G64355" "AT1G64680" "AT1G64770"
## [134] "AT1G65230" "AT1G66130" "AT1G66230" "AT1G67590" "AT1G68540" "AT1G68830" "AT1G68890"
## [141] "AT1G69140" "AT1G69890" "AT1G70090" "AT1G70290" "AT1G70580" "AT1G70820" "AT1G71000"
## [148] "AT1G71030" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72416" "AT1G72500" "AT1G72600"
## [155] "AT1G72610" "AT1G72630" "AT1G72640" "AT1G72645" "AT1G73750" "AT1G74070" "AT1G74930"
## [162] "AT1G74940" "AT1G75250" "AT1G75460" "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76110"
## [169] "AT1G76690" "AT1G77090" "AT1G77210" "AT1G77640" "AT1G78000" "AT1G78100" "AT1G78450"
## [176] "AT1G78600" "AT1G78990" "AT1G78995" "AT1G79770" "AT1G80440" "AT1G80920" "AT2G01590"
## [183] "AT2G01755" "AT2G01850" "AT2G01870" "AT2G01890" "AT2G02070" "AT2G02950" "AT2G02990"
## [190] "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03710" "AT2G04790" "AT2G04795"
## [197] "AT2G05070" "AT2G05100" "AT2G05160" "AT2G13360" "AT2G15090" "AT2G15890" "AT2G15970"
## [204] "AT2G16365" "AT2G16630" "AT2G17230" "AT2G17695" "AT2G18160" "AT2G18162" "AT2G18300"
## [211] "AT2G18560" "AT2G18940" "AT2G20680" "AT2G21130" "AT2G21970" "AT2G22810" "AT2G23130"
## [218] "AT2G23290" "AT2G23600" "AT2G23840" "AT2G24550" "AT2G24580" "AT2G25130" "AT2G25200"
## [225] "AT2G25900" "AT2G26080" "AT2G26710" "AT2G26975" "AT2G27420" "AT2G28120" "AT2G28305"
## [232] "AT2G28605" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360"
## [239] "AT2G29630" "AT2G29650" "AT2G29670" "AT2G30150" "AT2G30390" "AT2G30420" "AT2G30930"
## [246] "AT2G31790" "AT2G32100" "AT2G32179" "AT2G32180" "AT2G32290" "AT2G32470" "AT2G32480"
## [253] "AT2G32560" "AT2G32640" "AT2G33255" "AT2G33855" "AT2G34620" "AT2G35130" "AT2G35260"
## [260] "AT2G35660" "AT2G36830" "AT2G36990" "AT2G37450" "AT2G37540" "AT2G37585" "AT2G37950"
## [267] "AT2G38230" "AT2G38460" "AT2G38530" "AT2G39730" "AT2G39980" "AT2G40000" "AT2G40540"
## [274] "AT2G40840" "AT2G40960" "AT2G41430" "AT2G41480" "AT2G42320" "AT2G43010" "AT2G43100"
## [281] "AT2G45180" "AT2G45560" "AT2G45850" "AT2G46790" "AT2G47485" "AT2G47920" "AT3G01060"
## [288] "AT3G01440" "AT3G01810" "AT3G02050" "AT3G02730" "AT3G03190" "AT3G03780" "AT3G04550"
## [295] "AT3G04960" "AT3G05625" "AT3G05936" "AT3G06070" "AT3G06145" "AT3G06160" "AT3G06520"
## [302] "AT3G07310" "AT3G07500" "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09050" "AT3G09160"
## [309] "AT3G09162" "AT3G09580" "AT3G10520" "AT3G11110" "AT3G12685" "AT3G13470" "AT3G13750"
## [316] "AT3G14415" "AT3G15570" "AT3G15850" "AT3G16250" "AT3G16350" "AT3G17170" "AT3G17470"
## [323] "AT3G17640" "AT3G17930" "AT3G18080" "AT3G18750" "AT3G18773" "AT3G19000" "AT3G19002"
## [330] "AT3G19480" "AT3G19680" "AT3G19690" "AT3G19930" "AT3G20350" "AT3G20820" "AT3G21460"
## [337] "AT3G21755" "AT3G21760" "AT3G21870" "AT3G23880" "AT3G24030" "AT3G24430" "AT3G25410"
## [344] "AT3G25717" "AT3G26280" "AT3G26490" "AT3G26510" "AT3G26570" "AT3G26740" "AT3G27690"
## [351] "AT3G29185" "AT3G29320" "AT3G44020" "AT3G45780" "AT3G45970" "AT3G46130" "AT3G46370"
## [358] "AT3G46580" "AT3G46630" "AT3G46640" "AT3G46970" "AT3G47070" "AT3G47430" "AT3G47500"
## [365] "AT3G47750" "AT3G48200" "AT3G48280" "AT3G48350" "AT3G48420" "AT3G48460" "AT3G48720"
## [372] "AT3G49470" "AT3G49570" "AT3G49580" "AT3G49790" "AT3G50060" "AT3G50685" "AT3G50840"
## [379] "AT3G51400" "AT3G51420" "AT3G51510" "AT3G52070" "AT3G52072" "AT3G53420" "AT3G53470"
## [386] "AT3G53800" "AT3G53830" "AT3G54500" "AT3G54600" "AT3G54830" "AT3G55240" "AT3G55630"
## [393] "AT3G55646" "AT3G55760" "AT3G56000" "AT3G56160" "AT3G56290" "AT3G57190" "AT3G58620"
## [400] "AT3G58990" "AT3G59060" "AT3G59940" "AT3G61060" "AT3G61870" "AT3G62410" "AT3G62550"
## [407] "AT3G62630" "AT3G62750" "AT3G62950" "AT4G00165" "AT4G00360" "AT4G00370" "AT4G01130"
## [414] "AT4G01330" "AT4G01670" "AT4G02770" "AT4G03400" "AT4G03510" "AT4G04330" "AT4G04340"
## [421] "AT4G04810" "AT4G04830" "AT4G04840" "AT4G05070" "AT4G07400" "AT4G09350" "AT4G09670"
## [428] "AT4G09760" "AT4G10120" "AT4G11360" "AT4G12310" "AT4G12320" "AT4G12390" "AT4G12830"
## [435] "AT4G13830" "AT4G14540" "AT4G14740" "AT4G15450" "AT4G15630" "AT4G17090" "AT4G17360"
## [442] "AT4G17810" "AT4G18210" "AT4G18240" "AT4G19170" "AT4G19420" "AT4G19530" "AT4G20260"
## [449] "AT4G20820" "AT4G20840" "AT4G21445" "AT4G21870" "AT4G21880" "AT4G23890" "AT4G24090"
## [456] "AT4G24350" "AT4G24660" "AT4G24810" "AT4G25050" "AT4G25470" "AT4G25780" "AT4G26150"
## [463] "AT4G26370" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27440" "AT4G27700" "AT4G27720"
## [470] "AT4G27730" "AT4G27820" "AT4G28703" "AT4G28740" "AT4G29190" "AT4G31850" "AT4G32350"
## [477] "AT4G32770" "AT4G32800" "AT4G33010" "AT4G33220" "AT4G33660" "AT4G33980" "AT4G34090"
## [484] "AT4G34730" "AT4G35090" "AT4G36040" "AT4G36530" "AT4G37260" "AT4G37800" "AT4G37925"
## [491] "AT4G38430" "AT4G38770" "AT4G38840" "AT4G39330" "AT4G39710" "AT5G01410" "AT5G01520"
## [498] "AT5G02010" "AT5G02180" "AT5G02810" "AT5G02830" "AT5G05440" "AT5G05580" "AT5G05740"
## [505] "AT5G05890" "AT5G06220" "AT5G06980" "AT5G08150" "AT5G08410" "AT5G08720" "AT5G09660"
## [512] "AT5G09820" "AT5G10150" "AT5G10470" "AT5G10690" "AT5G11070" "AT5G11410" "AT5G11580"
## [519] "AT5G11610" "AT5G12110" "AT5G12950" "AT5G13730" "AT5G14200" "AT5G14360" "AT5G15350"
## [526] "AT5G16400" "AT5G17670" "AT5G18670" "AT5G19100" "AT5G19140" "AT5G19190" "AT5G20225"
## [533] "AT5G20670" "AT5G21430" "AT5G21940" "AT5G22920" "AT5G23010" "AT5G23060" "AT5G23210"
## [540] "AT5G23360" "AT5G23920" "AT5G23980" "AT5G24000" "AT5G24030" "AT5G24120" "AT5G24150"
## [547] "AT5G24155" "AT5G24160" "AT5G24460" "AT5G24470" "AT5G25120" "AT5G25130" "AT5G25240"
## [554] "AT5G25610" "AT5G25630" "AT5G26220" "AT5G26820" "AT5G27290" "AT5G27350" "AT5G27390"
## [561] "AT5G28020" "AT5G28500" "AT5G35170" "AT5G35790" "AT5G38290" "AT5G38510" "AT5G38520"
## [568] "AT5G39080" "AT5G39210" "AT5G39530" "AT5G40380" "AT5G41050" "AT5G41800" "AT5G42200"
## [575] "AT5G43750" "AT5G43870" "AT5G44005" "AT5G44130" "AT5G44190" "AT5G44260" "AT5G44410"
## [582] "AT5G45820" "AT5G45830" "AT5G46220" "AT5G46580" "AT5G46600" "AT5G47330" "AT5G47370"
## [589] "AT5G47440" "AT5G47900" "AT5G48545" "AT5G48850" "AT5G48910" "AT5G49448" "AT5G49450"
## [596] "AT5G49730" "AT5G49740" "AT5G50450" "AT5G50950" "AT5G51390" "AT5G51550" "AT5G51720"
## [603] "AT5G52100" "AT5G52120" "AT5G52970" "AT5G54145" "AT5G54170" "AT5G54300" "AT5G54585"
## [610] "AT5G54980" "AT5G55740" "AT5G56100" "AT5G56544" "AT5G56550" "AT5G56850" "AT5G57100"
## [617] "AT5G57340" "AT5G57660" "AT5G57800" "AT5G58260" "AT5G58310" "AT5G58900" "AT5G59130"
## [624] "AT5G59730" "AT5G59750" "AT5G60400" "AT5G60680" "AT5G61350" "AT5G61590" "AT5G62140"
## [631] "AT5G62280" "AT5G62350" "AT5G62360" "AT5G62430" "AT5G62730" "AT5G62840" "AT5G63380"
## [638] "AT5G63780" "AT5G63800" "AT5G63820" "AT5G64170" "AT5G64380" "AT5G64850" "AT5G65207"
## [645] "AT5G65925" "AT5G66520" "AT5G66590" "AT5G66880" "AT5G67300" "AT5G67370"
##
## $Up$`M6-V6`
## [1] "AT1G01390" "AT1G03130" "AT1G03630" "AT1G05675" "AT1G06040" "AT1G06460" "AT1G06680"
## [8] "AT1G07050" "AT1G08380" "AT1G10020" "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960"
## [15] "AT1G12090" "AT1G12710" "AT1G12730" "AT1G13245" "AT1G13260" "AT1G13650" "AT1G13930"
## [22] "AT1G14150" "AT1G14200" "AT1G14700" "AT1G15820" "AT1G15980" "AT1G17970" "AT1G18000"
## [29] "AT1G18010" "AT1G19150" "AT1G19960" "AT1G20020" "AT1G21130" "AT1G21500" "AT1G22370"
## [36] "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23390" "AT1G23740" "AT1G24020"
## [43] "AT1G25400" "AT1G25560" "AT1G26800" "AT1G27480" "AT1G29440" "AT1G29910" "AT1G29920"
## [50] "AT1G30380" "AT1G31330" "AT1G31690" "AT1G32080" "AT1G32220" "AT1G33600" "AT1G35140"
## [57] "AT1G36370" "AT1G43670" "AT1G44446" "AT1G44575" "AT1G50590" "AT1G51080" "AT1G51110"
## [64] "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51805" "AT1G52220" "AT1G52342" "AT1G54780"
## [71] "AT1G54790" "AT1G54820" "AT1G55370" "AT1G56300" "AT1G57590" "AT1G57990" "AT1G60800"
## [78] "AT1G61190" "AT1G61300" "AT1G61520" "AT1G64770" "AT1G65230" "AT1G66130" "AT1G66230"
## [85] "AT1G68050" "AT1G68840" "AT1G69140" "AT1G69830" "AT1G69890" "AT1G70420" "AT1G70820"
## [92] "AT1G71000" "AT1G71030" "AT1G71970" "AT1G72416" "AT1G72600" "AT1G72610" "AT1G73470"
## [99] "AT1G73480" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74730" "AT1G75280" "AT1G75900"
## [106] "AT1G76080" "AT1G78000" "AT1G78600" "AT1G78990" "AT1G79330" "AT1G80440" "AT1G80920"
## [113] "AT2G01755" "AT2G01890" "AT2G02070" "AT2G02450" "AT2G03440" "AT2G05070" "AT2G05100"
## [120] "AT2G15090" "AT2G15890" "AT2G15970" "AT2G16365" "AT2G17880" "AT2G18160" "AT2G18162"
## [127] "AT2G18350" "AT2G19310" "AT2G21130" "AT2G22810" "AT2G23290" "AT2G23840" "AT2G24240"
## [134] "AT2G24550" "AT2G24580" "AT2G25200" "AT2G25900" "AT2G26150" "AT2G26560" "AT2G27385"
## [141] "AT2G28120" "AT2G28900" "AT2G29170" "AT2G29290" "AT2G29310" "AT2G29360" "AT2G29650"
## [148] "AT2G30420" "AT2G31040" "AT2G32100" "AT2G32500" "AT2G34410" "AT2G34420" "AT2G34620"
## [155] "AT2G36145" "AT2G36390" "AT2G37540" "AT2G37585" "AT2G37950" "AT2G39400" "AT2G40000"
## [162] "AT2G40080" "AT2G40100" "AT2G40340" "AT2G40840" "AT2G40960" "AT2G41430" "AT2G42530"
## [169] "AT2G43010" "AT2G43120" "AT2G44490" "AT2G45560" "AT2G46790" "AT3G01060" "AT3G01500"
## [176] "AT3G01810" "AT3G02730" "AT3G06070" "AT3G06145" "AT3G06160" "AT3G07310" "AT3G08920"
## [183] "AT3G08940" "AT3G09580" "AT3G10020" "AT3G10060" "AT3G10520" "AT3G13470" "AT3G14200"
## [190] "AT3G16250" "AT3G18080" "AT3G18500" "AT3G18773" "AT3G18890" "AT3G19680" "AT3G19690"
## [197] "AT3G23880" "AT3G24515" "AT3G26290" "AT3G26510" "AT3G26740" "AT3G27690" "AT3G29320"
## [204] "AT3G29330" "AT3G46370" "AT3G46630" "AT3G46640" "AT3G46780" "AT3G46970" "AT3G47070"
## [211] "AT3G47460" "AT3G47470" "AT3G47500" "AT3G48280" "AT3G48420" "AT3G48720" "AT3G49580"
## [218] "AT3G50960" "AT3G52070" "AT3G52072" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54500"
## [225] "AT3G54890" "AT3G55240" "AT3G55630" "AT3G55760" "AT3G56160" "AT3G59060" "AT3G59870"
## [232] "AT3G60390" "AT3G61870" "AT3G62550" "AT3G63160" "AT4G00165" "AT4G02770" "AT4G03510"
## [239] "AT4G04020" "AT4G04330" "AT4G04810" "AT4G04830" "AT4G05070" "AT4G09760" "AT4G10120"
## [246] "AT4G10340" "AT4G11300" "AT4G11360" "AT4G11521" "AT4G12320" "AT4G12800" "AT4G12830"
## [253] "AT4G13010" "AT4G14270" "AT4G15210" "AT4G15233" "AT4G16880" "AT4G17100" "AT4G17810"
## [260] "AT4G18205" "AT4G18220" "AT4G19170" "AT4G19530" "AT4G21445" "AT4G21870" "AT4G23180"
## [267] "AT4G23810" "AT4G24240" "AT4G25290" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27310"
## [274] "AT4G27440" "AT4G27700" "AT4G28703" "AT4G29190" "AT4G32280" "AT4G33660" "AT4G33980"
## [281] "AT4G36040" "AT4G36530" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G38550" "AT4G38552"
## [288] "AT4G39730" "AT5G02180" "AT5G02810" "AT5G02890" "AT5G05580" "AT5G05890" "AT5G06220"
## [295] "AT5G06230" "AT5G06290" "AT5G08410" "AT5G10250" "AT5G10690" "AT5G11070" "AT5G11242"
## [302] "AT5G12110" "AT5G12950" "AT5G13630" "AT5G13730" "AT5G16350" "AT5G18030" "AT5G21430"
## [309] "AT5G22920" "AT5G23210" "AT5G23360" "AT5G24300" "AT5G24460" "AT5G24470" "AT5G25240"
## [316] "AT5G25280" "AT5G26220" "AT5G27290" "AT5G28610" "AT5G38510" "AT5G38980" "AT5G39210"
## [323] "AT5G39530" "AT5G40500" "AT5G43440" "AT5G43750" "AT5G44005" "AT5G44060" "AT5G44260"
## [330] "AT5G44410" "AT5G45820" "AT5G47370" "AT5G48545" "AT5G49448" "AT5G49450" "AT5G49730"
## [337] "AT5G49900" "AT5G50450" "AT5G51550" "AT5G51720" "AT5G54270" "AT5G54585" "AT5G55740"
## [344] "AT5G56544" "AT5G56550" "AT5G57560" "AT5G58310" "AT5G59130" "AT5G60100" "AT5G60680"
## [351] "AT5G61160" "AT5G61270" "AT5G61440" "AT5G61590" "AT5G62280" "AT5G62430" "AT5G62720"
## [358] "AT5G62730" "AT5G63380" "AT5G63780" "AT5G64170" "AT5G65207" "AT5G67370" "ATCG00930"
##
## $Up$`A6-V6`
## [1] "AT1G02220" "AT1G02270" "AT1G02390" "AT1G05020" "AT1G05880" "AT1G08860" "AT1G14200" "AT1G19020"
## [9] "AT1G19250" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22770" "AT1G23200" "AT1G31290" "AT1G31690"
## [17] "AT1G66550" "AT1G66600" "AT1G67810" "AT1G68200" "AT1G68390" "AT1G71100" "AT2G04040" "AT2G07690"
## [25] "AT2G13810" "AT2G26560" "AT2G29720" "AT2G34500" "AT2G37980" "AT2G39110" "AT2G40550" "AT2G47140"
## [33] "AT2G47730" "AT3G13080" "AT3G13100" "AT3G22910" "AT3G26830" "AT3G44830" "AT3G47540" "AT3G48640"
## [41] "AT3G49540" "AT3G55470" "AT3G60450" "AT4G02380" "AT4G16820" "AT4G22530" "AT4G30280" "AT4G34135"
## [49] "AT4G35180" "AT4G37030" "AT4G37370" "AT4G37390" "AT5G01040" "AT5G01050" "AT5G02490" "AT5G02810"
## [57] "AT5G22060" "AT5G22530" "AT5G24910" "AT5G25930" "AT5G41730" "AT5G42380" "AT5G43910" "AT5G52810"
## [65] "AT5G54700" "AT5G61900" "AT5G62180" "AT5G64870" "AT5G66890" "ATCG00330" "ATCG00340" "ATCG00350"
## [73] "ATCG00490" "ATCG00710" "ATCG00930" "ATCG00940" "ATCG01200" "ATMG00020"
##
## $Up$`M12-A12`
## [1] "AT1G01120" "AT1G01190" "AT1G01300" "AT1G01430" "AT1G01610" "AT1G01620" "AT1G02650"
## [8] "AT1G02710" "AT1G03600" "AT1G03630" "AT1G03680" "AT1G04160" "AT1G04420" "AT1G05420"
## [15] "AT1G06160" "AT1G06240" "AT1G06265" "AT1G06460" "AT1G07440" "AT1G07880" "AT1G08160"
## [22] "AT1G08300" "AT1G09340" "AT1G09440" "AT1G09750" "AT1G10380" "AT1G10657" "AT1G10910"
## [29] "AT1G10960" "AT1G11130" "AT1G11670" "AT1G11720" "AT1G11860" "AT1G11925" "AT1G12060"
## [36] "AT1G12090" "AT1G12250" "AT1G12500" "AT1G12730" "AT1G12900" "AT1G13380" "AT1G13650"
## [43] "AT1G13790" "AT1G14030" "AT1G14150" "AT1G14270" "AT1G14687" "AT1G14700" "AT1G14720"
## [50] "AT1G14900" "AT1G15000" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180" "AT1G15260"
## [57] "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15690" "AT1G15980" "AT1G15990" "AT1G16080"
## [64] "AT1G16410" "AT1G16720" "AT1G17100" "AT1G17200" "AT1G17650" "AT1G17850" "AT1G18000"
## [71] "AT1G18010" "AT1G18415" "AT1G18420" "AT1G18620" "AT1G18650" "AT1G18735" "AT1G19150"
## [78] "AT1G19220" "AT1G19350" "AT1G19450" "AT1G20010" "AT1G20020" "AT1G20340" "AT1G20823"
## [85] "AT1G21500" "AT1G21680" "AT1G21880" "AT1G21910" "AT1G22330" "AT1G22370" "AT1G22550"
## [92] "AT1G22590" "AT1G22850" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23480" "AT1G23530"
## [99] "AT1G23740" "AT1G23935" "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26761" "AT1G26810"
## [106] "AT1G27020" "AT1G27210" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G29430" "AT1G29440"
## [113] "AT1G29450" "AT1G29460" "AT1G29660" "AT1G29670" "AT1G29790" "AT1G29980" "AT1G30520"
## [120] "AT1G30760" "AT1G30840" "AT1G31173" "AT1G31330" "AT1G31710" "AT1G31835" "AT1G32060"
## [127] "AT1G32080" "AT1G32200" "AT1G32220" "AT1G32470" "AT1G32540" "AT1G32550" "AT1G32860"
## [134] "AT1G32990" "AT1G33240" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G35140" "AT1G35420"
## [141] "AT1G35680" "AT1G42970" "AT1G44575" "AT1G45545" "AT1G47440" "AT1G47670" "AT1G48030"
## [148] "AT1G49010" "AT1G49200" "AT1G49380" "AT1G49650" "AT1G49730" "AT1G50450" "AT1G50900"
## [155] "AT1G50910" "AT1G51080" "AT1G51110" "AT1G51940" "AT1G52190" "AT1G53300" "AT1G54730"
## [162] "AT1G54780" "AT1G54820" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490" "AT1G56500"
## [169] "AT1G56720" "AT1G58150" "AT1G58370" "AT1G59840" "AT1G60000" "AT1G60160" "AT1G60550"
## [176] "AT1G60600" "AT1G60690" "AT1G60700" "AT1G60800" "AT1G60950" "AT1G61240" "AT1G61795"
## [183] "AT1G62520" "AT1G62750" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63480" "AT1G64150"
## [190] "AT1G64390" "AT1G64510" "AT1G64680" "AT1G64770" "AT1G65230" "AT1G65590" "AT1G65860"
## [197] "AT1G66130" "AT1G66140" "AT1G66820" "AT1G67590" "AT1G67700" "AT1G67740" "AT1G68010"
## [204] "AT1G68190" "AT1G68400" "AT1G68520" "AT1G68530" "AT1G68560" "AT1G68810" "AT1G68890"
## [211] "AT1G68935" "AT1G68940" "AT1G69140" "AT1G69530" "AT1G70280" "AT1G70370" "AT1G70410"
## [218] "AT1G70430" "AT1G70760" "AT1G70820" "AT1G70940" "AT1G72140" "AT1G72270" "AT1G72310"
## [225] "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72810" "AT1G73110" "AT1G73590" "AT1G74070"
## [232] "AT1G74370" "AT1G74670" "AT1G74730" "AT1G74940" "AT1G75500" "AT1G75690" "AT1G75800"
## [239] "AT1G76610" "AT1G77490" "AT1G77630" "AT1G78020" "AT1G78060" "AT1G78450" "AT1G78820"
## [246] "AT1G78830" "AT1G78860" "AT1G78995" "AT1G80030" "AT1G80080" "AT1G80520" "AT1G80530"
## [253] "AT1G80630" "AT1G80640" "AT2G01420" "AT2G01590" "AT2G01630" "AT2G01990" "AT2G02020"
## [260] "AT2G02780" "AT2G02950" "AT2G02980" "AT2G03420" "AT2G03750" "AT2G04380" "AT2G04780"
## [267] "AT2G04790" "AT2G05160" "AT2G05790" "AT2G13360" "AT2G13550" "AT2G14880" "AT2G14890"
## [274] "AT2G16630" "AT2G17230" "AT2G17740" "AT2G18300" "AT2G18560" "AT2G18969" "AT2G18970"
## [281] "AT2G19170" "AT2G19620" "AT2G20180" "AT2G20210" "AT2G20290" "AT2G20340" "AT2G20680"
## [288] "AT2G20890" "AT2G21080" "AT2G21140" "AT2G21330" "AT2G21830" "AT2G22810" "AT2G22890"
## [295] "AT2G23100" "AT2G23130" "AT2G23600" "AT2G24060" "AT2G24090" "AT2G24150" "AT2G24280"
## [302] "AT2G24580" "AT2G25270" "AT2G25840" "AT2G26080" "AT2G26250" "AT2G26330" "AT2G26710"
## [309] "AT2G26870" "AT2G26900" "AT2G26910" "AT2G27040" "AT2G27060" "AT2G27130" "AT2G27190"
## [316] "AT2G27385" "AT2G27810" "AT2G28000" "AT2G28040" "AT2G28790" "AT2G28810" "AT2G28930"
## [323] "AT2G28950" "AT2G29050" "AT2G29290" "AT2G29320" "AT2G29550" "AT2G29630" "AT2G30170"
## [330] "AT2G30420" "AT2G31170" "AT2G31790" "AT2G31902" "AT2G32100" "AT2G32179" "AT2G32180"
## [337] "AT2G32560" "AT2G32640" "AT2G33060" "AT2G33250" "AT2G33570" "AT2G33860" "AT2G34180"
## [344] "AT2G34490" "AT2G34510" "AT2G34620" "AT2G34680" "AT2G34930" "AT2G35130" "AT2G35190"
## [351] "AT2G35260" "AT2G35500" "AT2G35590" "AT2G35859" "AT2G35860" "AT2G35960" "AT2G36050"
## [358] "AT2G36830" "AT2G36990" "AT2G37180" "AT2G37220" "AT2G37450" "AT2G37640" "AT2G37950"
## [365] "AT2G38050" "AT2G38080" "AT2G38120" "AT2G38170" "AT2G38460" "AT2G38530" "AT2G39130"
## [372] "AT2G39140" "AT2G39190" "AT2G39470" "AT2G39730" "AT2G40480" "AT2G40540" "AT2G40610"
## [379] "AT2G40690" "AT2G40815" "AT2G41480" "AT2G41720" "AT2G41820" "AT2G42170" "AT2G42290"
## [386] "AT2G42300" "AT2G42320" "AT2G42380" "AT2G42940" "AT2G43100" "AT2G43360" "AT2G44230"
## [393] "AT2G44740" "AT2G44920" "AT2G45470" "AT2G45560" "AT2G45850" "AT2G45960" "AT2G46250"
## [400] "AT2G46630" "AT2G46820" "AT2G47370" "AT2G47440" "AT2G47590" "AT2G47840" "AT2G47930"
## [407] "AT2G47940" "AT3G01060" "AT3G01440" "AT3G01480" "AT3G01500" "AT3G01810" "AT3G02050"
## [414] "AT3G02730" "AT3G03780" "AT3G03980" "AT3G04140" "AT3G04160" "AT3G04550" "AT3G06145"
## [421] "AT3G06433" "AT3G06750" "AT3G07010" "AT3G07200" "AT3G07210" "AT3G07320" "AT3G07460"
## [428] "AT3G07540" "AT3G08030" "AT3G08920" "AT3G09160" "AT3G09580" "AT3G09780" "AT3G09800"
## [435] "AT3G10040" "AT3G10160" "AT3G10840" "AT3G11110" "AT3G11700" "AT3G12110" "AT3G12610"
## [442] "AT3G12780" "AT3G13000" "AT3G13120" "AT3G13180" "AT3G13470" "AT3G13510" "AT3G14210"
## [449] "AT3G14240" "AT3G14310" "AT3G14330" "AT3G14350" "AT3G14415" "AT3G14420" "AT3G15030"
## [456] "AT3G15110" "AT3G15530" "AT3G15570" "AT3G15680" "AT3G15720" "AT3G15800" "AT3G16180"
## [463] "AT3G16240" "AT3G16250" "AT3G16370" "AT3G16520" "AT3G16850" "AT3G17350" "AT3G17640"
## [470] "AT3G17830" "AT3G18050" "AT3G18080" "AT3G18090" "AT3G18110" "AT3G18773" "AT3G18890"
## [477] "AT3G19120" "AT3G19480" "AT3G19710" "AT3G19850" "AT3G20015" "AT3G20350" "AT3G20760"
## [484] "AT3G20810" "AT3G20820" "AT3G21352" "AT3G22150" "AT3G22790" "AT3G22810" "AT3G23700"
## [491] "AT3G23880" "AT3G24255" "AT3G24430" "AT3G25130" "AT3G25410" "AT3G25500" "AT3G25805"
## [498] "AT3G26060" "AT3G26510" "AT3G26520" "AT3G26570" "AT3G26650" "AT3G27850" "AT3G28040"
## [505] "AT3G28070" "AT3G28080" "AT3G28130" "AT3G28200" "AT3G28860" "AT3G29185" "AT3G29320"
## [512] "AT3G29670" "AT3G30720" "AT3G42670" "AT3G45010" "AT3G45230" "AT3G45420" "AT3G45430"
## [519] "AT3G45940" "AT3G46130" "AT3G46550" "AT3G46580" "AT3G46780" "AT3G46970" "AT3G48200"
## [526] "AT3G48420" "AT3G48460" "AT3G48610" "AT3G48720" "AT3G49260" "AT3G49290" "AT3G49670"
## [533] "AT3G49740" "AT3G50240" "AT3G50685" "AT3G50790" "AT3G50820" "AT3G50840" "AT3G51150"
## [540] "AT3G51480" "AT3G51510" "AT3G51820" "AT3G52150" "AT3G52670" "AT3G52720" "AT3G52940"
## [547] "AT3G52960" "AT3G53130" "AT3G53140" "AT3G53190" "AT3G53420" "AT3G53460" "AT3G53800"
## [554] "AT3G53950" "AT3G54050" "AT3G54600" "AT3G54690" "AT3G54830" "AT3G54910" "AT3G54920"
## [561] "AT3G55330" "AT3G55630" "AT3G55800" "AT3G56160" "AT3G56650" "AT3G57180" "AT3G58120"
## [568] "AT3G58620" "AT3G58820" "AT3G59250" "AT3G59780" "AT3G59890" "AT3G60320" "AT3G60530"
## [575] "AT3G60630" "AT3G60750" "AT3G61160" "AT3G61490" "AT3G61750" "AT3G61820" "AT3G61870"
## [582] "AT3G62020" "AT3G62750" "AT3G62910" "AT3G63110" "AT3G63140" "AT3G63160" "AT3G63170"
## [589] "AT3G63410" "AT3G63510" "AT4G00165" "AT4G00370" "AT4G00400" "AT4G01130" "AT4G01310"
## [596] "AT4G01330" "AT4G01460" "AT4G02770" "AT4G03060" "AT4G03140" "AT4G03280" "AT4G04330"
## [603] "AT4G04340" "AT4G04350" "AT4G09010" "AT4G09420" "AT4G09640" "AT4G09650" "AT4G12030"
## [610] "AT4G12310" "AT4G12320" "AT4G12390" "AT4G12420" "AT4G12480" "AT4G12730" "AT4G12830"
## [617] "AT4G12900" "AT4G12917" "AT4G12980" "AT4G13340" "AT4G14480" "AT4G14713" "AT4G14740"
## [624] "AT4G14750" "AT4G15510" "AT4G15960" "AT4G16140" "AT4G16141" "AT4G16370" "AT4G16980"
## [631] "AT4G17180" "AT4G17340" "AT4G17460" "AT4G17560" "AT4G17600" "AT4G17810" "AT4G18197"
## [638] "AT4G18670" "AT4G18760" "AT4G19170" "AT4G19530" "AT4G20130" "AT4G20140" "AT4G20360"
## [645] "AT4G20430" "AT4G20840" "AT4G21870" "AT4G22120" "AT4G22690" "AT4G22890" "AT4G23000"
## [652] "AT4G23290" "AT4G23740" "AT4G23820" "AT4G23940" "AT4G24570" "AT4G24780" "AT4G24790"
## [659] "AT4G24810" "AT4G24972" "AT4G25050" "AT4G25200" "AT4G25780" "AT4G25910" "AT4G25960"
## [666] "AT4G26370" "AT4G26520" "AT4G26530" "AT4G26540" "AT4G26542" "AT4G27030" "AT4G27440"
## [673] "AT4G27720" "AT4G27730" "AT4G27980" "AT4G28050" "AT4G28180" "AT4G28660" "AT4G29060"
## [680] "AT4G29310" "AT4G29360" "AT4G30020" "AT4G30520" "AT4G30680" "AT4G30993" "AT4G31000"
## [687] "AT4G31060" "AT4G31820" "AT4G31850" "AT4G31890" "AT4G32880" "AT4G32980" "AT4G33000"
## [694] "AT4G33010" "AT4G33220" "AT4G33470" "AT4G33660" "AT4G34090" "AT4G34220" "AT4G34290"
## [701] "AT4G34830" "AT4G34900" "AT4G34980" "AT4G35090" "AT4G35250" "AT4G35290" "AT4G35420"
## [708] "AT4G35440" "AT4G36190" "AT4G36540" "AT4G37330" "AT4G37450" "AT4G37550" "AT4G37553"
## [715] "AT4G37800" "AT4G37925" "AT4G37930" "AT4G38160" "AT4G38400" "AT4G38430" "AT4G38660"
## [722] "AT4G38670" "AT4G38770" "AT4G38840" "AT4G38970" "AT4G39350" "AT4G39710" "AT5G01240"
## [729] "AT5G01730" "AT5G01740" "AT5G01920" "AT5G01930" "AT5G02160" "AT5G02180" "AT5G02760"
## [736] "AT5G02890" "AT5G02940" "AT5G04160" "AT5G04230" "AT5G04360" "AT5G04810" "AT5G04900"
## [743] "AT5G05580" "AT5G05740" "AT5G05890" "AT5G06390" "AT5G06670" "AT5G07020" "AT5G07030"
## [750] "AT5G07570" "AT5G07690" "AT5G07900" "AT5G08050" "AT5G09320" "AT5G09440" "AT5G09660"
## [757] "AT5G09730" "AT5G09820" "AT5G10150" "AT5G10180" "AT5G10430" "AT5G10470" "AT5G10530"
## [764] "AT5G10690" "AT5G11070" "AT5G11480" "AT5G12250" "AT5G12300" "AT5G12860" "AT5G12950"
## [771] "AT5G13400" "AT5G13510" "AT5G13690" "AT5G13730" "AT5G14200" "AT5G14450" "AT5G14565"
## [778] "AT5G14570" "AT5G14740" "AT5G14920" "AT5G15210" "AT5G15350" "AT5G16000" "AT5G16390"
## [785] "AT5G16400" "AT5G16540" "AT5G16590" "AT5G16715" "AT5G17520" "AT5G17670" "AT5G18030"
## [792] "AT5G18080" "AT5G18570" "AT5G18660" "AT5G19780" "AT5G19810" "AT5G20270" "AT5G20635"
## [799] "AT5G20740" "AT5G21222" "AT5G21430" "AT5G21910" "AT5G21920" "AT5G21930" "AT5G22640"
## [806] "AT5G22800" "AT5G23010" "AT5G23060" "AT5G23210" "AT5G23920" "AT5G23980" "AT5G24000"
## [813] "AT5G24010" "AT5G24300" "AT5G24750" "AT5G24920" "AT5G25130" "AT5G25190" "AT5G25280"
## [820] "AT5G26010" "AT5G26622" "AT5G26820" "AT5G27390" "AT5G27660" "AT5G27730" "AT5G28020"
## [827] "AT5G28500" "AT5G33280" "AT5G34795" "AT5G35170" "AT5G35750" "AT5G35790" "AT5G37660"
## [834] "AT5G38410" "AT5G38420" "AT5G38430" "AT5G38510" "AT5G38520" "AT5G39210" "AT5G40150"
## [841] "AT5G40380" "AT5G41050" "AT5G41920" "AT5G42070" "AT5G42100" "AT5G42240" "AT5G43750"
## [848] "AT5G43870" "AT5G44020" "AT5G44050" "AT5G44130" "AT5G44190" "AT5G44260" "AT5G44530"
## [855] "AT5G44600" "AT5G44680" "AT5G45650" "AT5G45930" "AT5G46110" "AT5G46220" "AT5G46290"
## [862] "AT5G46440" "AT5G46570" "AT5G46600" "AT5G46690" "AT5G46700" "AT5G47440" "AT5G47900"
## [869] "AT5G48320" "AT5G48360" "AT5G48545" "AT5G48790" "AT5G48900" "AT5G48910" "AT5G49020"
## [876] "AT5G49170" "AT5G49215" "AT5G49390" "AT5G49730" "AT5G49740" "AT5G50420" "AT5G50450"
## [883] "AT5G51550" "AT5G51560" "AT5G51720" "AT5G51820" "AT5G52100" "AT5G52110" "AT5G52190"
## [890] "AT5G52970" "AT5G53490" "AT5G53860" "AT5G53900" "AT5G54180" "AT5G54770" "AT5G54980"
## [897] "AT5G55220" "AT5G55480" "AT5G55740" "AT5G56040" "AT5G56100" "AT5G56590" "AT5G56850"
## [904] "AT5G57100" "AT5G57780" "AT5G58140" "AT5G58160" "AT5G58250" "AT5G58260" "AT5G58300"
## [911] "AT5G58330" "AT5G58480" "AT5G58600" "AT5G59130" "AT5G59250" "AT5G59750" "AT5G60490"
## [918] "AT5G61130" "AT5G61350" "AT5G61420" "AT5G61590" "AT5G62280" "AT5G62350" "AT5G62360"
## [925] "AT5G62670" "AT5G62730" "AT5G62840" "AT5G62890" "AT5G63180" "AT5G63500" "AT5G63810"
## [932] "AT5G64040" "AT5G64120" "AT5G64280" "AT5G64380" "AT5G64640" "AT5G65700" "AT5G65730"
## [939] "AT5G66330" "AT5G66520" "AT5G66770" "AT5G66920" "AT5G67360"
##
## $Up$`M12-V12`
## [1] "AT1G01430" "AT1G02650" "AT1G03130" "AT1G03300" "AT1G04730" "AT1G06160" "AT1G06760"
## [8] "AT1G07300" "AT1G08300" "AT1G08900" "AT1G09200" "AT1G09440" "AT1G10020" "AT1G10657"
## [15] "AT1G10910" "AT1G10990" "AT1G11000" "AT1G11350" "AT1G11380" "AT1G13700" "AT1G14070"
## [22] "AT1G14440" "AT1G14700" "AT1G15125" "AT1G15890" "AT1G15980" "AT1G15990" "AT1G17990"
## [29] "AT1G18000" "AT1G18010" "AT1G18090" "AT1G18620" "AT1G19620" "AT1G21050" "AT1G21120"
## [36] "AT1G21130" "AT1G21580" "AT1G21920" "AT1G22370" "AT1G23050" "AT1G23052" "AT1G23080"
## [43] "AT1G23480" "AT1G25440" "AT1G26800" "AT1G27420" "AT1G27480" "AT1G28400" "AT1G29430"
## [50] "AT1G29450" "AT1G29460" "AT1G29500" "AT1G29600" "AT1G29660" "AT1G29715" "AT1G31173"
## [57] "AT1G31820" "AT1G33055" "AT1G33600" "AT1G33811" "AT1G48780" "AT1G51850" "AT1G51920"
## [64] "AT1G51940" "AT1G54730" "AT1G54820" "AT1G55330" "AT1G55370" "AT1G56720" "AT1G60860"
## [71] "AT1G61190" "AT1G61240" "AT1G61300" "AT1G61500" "AT1G61795" "AT1G62520" "AT1G62790"
## [78] "AT1G62910" "AT1G63260" "AT1G63400" "AT1G63880" "AT1G66920" "AT1G66940" "AT1G68190"
## [85] "AT1G68520" "AT1G68840" "AT1G68940" "AT1G70100" "AT1G70940" "AT1G71970" "AT1G72416"
## [92] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G73110" "AT1G74940" "AT1G76100"
## [99] "AT1G77210" "AT1G77990" "AT1G78265" "AT1G78270" "AT1G78820" "AT1G78830" "AT1G80630"
## [106] "AT2G01420" "AT2G01630" "AT2G01860" "AT2G02020" "AT2G02950" "AT2G02980" "AT2G03750"
## [113] "AT2G05160" "AT2G07680" "AT2G14050" "AT2G15880" "AT2G17230" "AT2G17740" "AT2G17880"
## [120] "AT2G18300" "AT2G18560" "AT2G18890" "AT2G20180" "AT2G20950" "AT2G22810" "AT2G22890"
## [127] "AT2G23100" "AT2G23600" "AT2G24280" "AT2G25470" "AT2G26710" "AT2G28120" "AT2G28460"
## [134] "AT2G28720" "AT2G28740" "AT2G29290" "AT2G29320" "AT2G30930" "AT2G31150" "AT2G32100"
## [141] "AT2G33050" "AT2G33051" "AT2G33060" "AT2G34620" "AT2G35170" "AT2G35260" "AT2G35590"
## [148] "AT2G36050" "AT2G37450" "AT2G37950" "AT2G39580" "AT2G40100" "AT2G40610" "AT2G40850"
## [155] "AT2G42170" "AT2G42320" "AT2G42380" "AT2G42690" "AT2G44380" "AT2G44740" "AT2G45850"
## [162] "AT2G47440" "AT3G01480" "AT3G03820" "AT3G04160" "AT3G04720" "AT3G04960" "AT3G06070"
## [169] "AT3G07010" "AT3G07460" "AT3G07540" "AT3G10120" "AT3G10520" "AT3G12610" "AT3G13000"
## [176] "AT3G13062" "AT3G13437" "AT3G15356" "AT3G15570" "AT3G16250" "AT3G16520" "AT3G16530"
## [183] "AT3G18035" "AT3G18050" "AT3G18730" "AT3G18773" "AT3G19380" "AT3G19680" "AT3G19850"
## [190] "AT3G20350" "AT3G20820" "AT3G21060" "AT3G22460" "AT3G22968" "AT3G22970" "AT3G23880"
## [197] "AT3G25717" "AT3G26320" "AT3G26510" "AT3G26890" "AT3G26932" "AT3G28040" "AT3G28860"
## [204] "AT3G29670" "AT3G30720" "AT3G42670" "AT3G44260" "AT3G45290" "AT3G45940" "AT3G46320"
## [211] "AT3G48200" "AT3G50120" "AT3G50840" "AT3G52720" "AT3G55090" "AT3G56160" "AT3G58120"
## [218] "AT3G58620" "AT3G59550" "AT3G59780" "AT3G60320" "AT3G62150" "AT3G62750" "AT4G00950"
## [225] "AT4G01330" "AT4G01460" "AT4G02075" "AT4G02540" "AT4G02900" "AT4G03140" "AT4G12390"
## [232] "AT4G12420" "AT4G12480" "AT4G13495" "AT4G14750" "AT4G15540" "AT4G17460" "AT4G17810"
## [239] "AT4G18197" "AT4G18205" "AT4G18380" "AT4G18670" "AT4G18760" "AT4G19170" "AT4G19420"
## [246] "AT4G19530" "AT4G19870" "AT4G20260" "AT4G21870" "AT4G22560" "AT4G22690" "AT4G22710"
## [253] "AT4G23290" "AT4G24570" "AT4G27300" "AT4G27440" "AT4G27730" "AT4G28162" "AT4G28350"
## [260] "AT4G29310" "AT4G30110" "AT4G30410" "AT4G32280" "AT4G32450" "AT4G33560" "AT4G34980"
## [267] "AT4G36220" "AT4G36540" "AT4G36690" "AT4G37800" "AT4G37925" "AT4G38080" "AT4G38840"
## [274] "AT4G38860" "AT4G38950" "AT5G01560" "AT5G01930" "AT5G02760" "AT5G03120" "AT5G03830"
## [281] "AT5G07150" "AT5G07580" "AT5G10150" "AT5G10250" "AT5G10530" "AT5G10690" "AT5G11070"
## [288] "AT5G11610" "AT5G11670" "AT5G13730" "AT5G15350" "AT5G15580" "AT5G16030" "AT5G16530"
## [295] "AT5G18030" "AT5G18080" "AT5G18290" "AT5G21930" "AT5G22880" "AT5G23170" "AT5G23210"
## [302] "AT5G23280" "AT5G24000" "AT5G25190" "AT5G25630" "AT5G27950" "AT5G28020" "AT5G33280"
## [309] "AT5G35750" "AT5G35790" "AT5G38140" "AT5G38420" "AT5G41140" "AT5G41761" "AT5G43700"
## [316] "AT5G44260" "AT5G44600" "AT5G44650" "AT5G44680" "AT5G46270" "AT5G46440" "AT5G46690"
## [323] "AT5G47220" "AT5G47230" "AT5G48320" "AT5G49215" "AT5G49730" "AT5G50450" "AT5G51550"
## [330] "AT5G51560" "AT5G51970" "AT5G52100" "AT5G52280" "AT5G52900" "AT5G52910" "AT5G53170"
## [337] "AT5G56850" "AT5G57550" "AT5G57780" "AT5G58150" "AT5G59540" "AT5G59750" "AT5G60100"
## [344] "AT5G61000" "AT5G61160" "AT5G61590" "AT5G62280" "AT5G63410" "AT5G63800" "AT5G64120"
## [351] "AT5G64330" "AT5G64410" "AT5G65350" "AT5G65360" "AT5G66880" "AT5G67100"
##
## $Up$`A12-V12`
## [1] "AT1G02220" "AT1G02310" "AT1G02470" "AT1G02920" "AT1G03210" "AT1G03850" "AT1G08450"
## [8] "AT1G08630" "AT1G09200" "AT1G10070" "AT1G15890" "AT1G17020" "AT1G17990" "AT1G21120"
## [15] "AT1G21520" "AT1G21740" "AT1G26290" "AT1G26380" "AT1G26420" "AT1G27330" "AT1G33950"
## [22] "AT1G35670" "AT1G36622" "AT1G47890" "AT1G50520" "AT1G51860" "AT1G51920" "AT1G52200"
## [29] "AT1G53110" "AT1G53620" "AT1G56010" "AT1G56120" "AT1G58590" "AT1G61810" "AT1G63460"
## [36] "AT1G65470" "AT1G66960" "AT1G67520" "AT1G71970" "AT1G72060" "AT1G72070" "AT1G77145"
## [43] "AT2G02360" "AT2G02930" "AT2G07690" "AT2G23170" "AT2G24040" "AT2G24240" "AT2G24390"
## [50] "AT2G27920" "AT2G28110" "AT2G29350" "AT2G29950" "AT2G32160" "AT2G37750" "AT2G39320"
## [57] "AT2G40110" "AT2G40550" "AT2G41250" "AT2G41440" "AT2G43150" "AT2G44980" "AT3G03470"
## [64] "AT3G03650" "AT3G04070" "AT3G10320" "AT3G13437" "AT3G14280" "AT3G15518" "AT3G18250"
## [71] "AT3G18730" "AT3G19390" "AT3G21780" "AT3G22460" "AT3G26220" "AT3G26230" "AT3G28950"
## [78] "AT3G44300" "AT3G48490" "AT3G51250" "AT3G51660" "AT3G51750" "AT3G52630" "AT3G57550"
## [85] "AT3G59100" "AT3G60540" "AT3G61198" "AT3G62590" "AT3G62600" "AT4G02050" "AT4G02110"
## [92] "AT4G02520" "AT4G04620" "AT4G04740" "AT4G10860" "AT4G14020" "AT4G15610" "AT4G19370"
## [99] "AT4G19870" "AT4G21610" "AT4G27745" "AT4G28390" "AT4G33355" "AT4G37310" "AT4G37390"
## [106] "AT4G37520" "AT4G38080" "AT5G01610" "AT5G04180" "AT5G07820" "AT5G08760" "AT5G09290"
## [113] "AT5G10390" "AT5G10400" "AT5G10440" "AT5G14420" "AT5G15860" "AT5G15870" "AT5G24910"
## [120] "AT5G25450" "AT5G28646" "AT5G37740" "AT5G39520" "AT5G40010" "AT5G40690" "AT5G42530"
## [127] "AT5G47220" "AT5G49690" "AT5G52910" "AT5G52990" "AT5G56870" "AT5G57550" "AT5G59530"
## [134] "AT5G61070" "AT5G61160" "AT5G63240" "AT5G65360" "AT5G66170" "AT5G67600"
##
##
## $Down
## $Down$`M1-A1`
## [1] "AT1G07050" "AT1G16090" "AT1G68050" "AT2G17740" "AT2G19450" "AT4G12480" "AT4G33980" "AT5G40760"
## [9] "AT5G42900" "AT5G48250" "AT5G60100"
##
## $Down$`M1-V1`
## [1] "AT1G02920" "AT1G02930" "AT1G04280" "AT1G04620" "AT1G04990" "AT1G05300" "AT1G05710"
## [8] "AT1G06460" "AT1G07040" "AT1G07050" "AT1G07160" "AT1G07420" "AT1G10200" "AT1G10990"
## [15] "AT1G11200" "AT1G11925" "AT1G11950" "AT1G12710" "AT1G13270" "AT1G14170" "AT1G14540"
## [22] "AT1G15670" "AT1G16090" "AT1G17665" "AT1G19130" "AT1G19370" "AT1G20010" "AT1G20630"
## [29] "AT1G21110" "AT1G21120" "AT1G21130" "AT1G25320" "AT1G26380" "AT1G26420" "AT1G26665"
## [36] "AT1G27020" "AT1G27630" "AT1G28330" "AT1G29160" "AT1G31690" "AT1G33030" "AT1G48200"
## [43] "AT1G48210" "AT1G51610" "AT1G51920" "AT1G52200" "AT1G53035" "AT1G53100" "AT1G56140"
## [50] "AT1G56145" "AT1G56300" "AT1G56470" "AT1G60730" "AT1G61560" "AT1G63180" "AT1G66700"
## [57] "AT1G66780" "AT1G67970" "AT1G67980" "AT1G68050" "AT1G70800" "AT1G71000" "AT1G72330"
## [64] "AT1G76790" "AT1G79440" "AT2G02010" "AT2G02930" "AT2G05630" "AT2G14170" "AT2G15890"
## [71] "AT2G17740" "AT2G19190" "AT2G19450" "AT2G21130" "AT2G21660" "AT2G22450" "AT2G23110"
## [78] "AT2G24570" "AT2G25730" "AT2G25930" "AT2G26560" "AT2G26650" "AT2G27200" "AT2G29720"
## [85] "AT2G30750" "AT2G30770" "AT2G33830" "AT2G35980" "AT2G36390" "AT2G37940" "AT2G38465"
## [92] "AT2G39380" "AT2G39400" "AT2G39660" "AT2G39900" "AT2G39920" "AT2G40080" "AT2G40110"
## [99] "AT2G40340" "AT2G43620" "AT2G44080" "AT2G47390" "AT3G07640" "AT3G07650" "AT3G09390"
## [106] "AT3G09405" "AT3G10410" "AT3G11230" "AT3G12030" "AT3G16180" "AT3G16530" "AT3G19210"
## [113] "AT3G19260" "AT3G20410" "AT3G23280" "AT3G26670" "AT3G26740" "AT3G26830" "AT3G27300"
## [120] "AT3G28370" "AT3G43670" "AT3G45060" "AT3G46440" "AT3G46640" "AT3G47860" "AT3G49110"
## [127] "AT3G50210" "AT3G50500" "AT3G51330" "AT3G54150" "AT3G55450" "AT3G56500" "AT3G57550"
## [134] "AT3G58570" "AT3G59350" "AT3G61160" "AT3G63380" "AT4G01130" "AT4G01250" "AT4G02380"
## [141] "AT4G02520" "AT4G03460" "AT4G04330" "AT4G09020" "AT4G11600" "AT4G12480" "AT4G15233"
## [148] "AT4G16146" "AT4G16820" "AT4G17140" "AT4G18540" "AT4G18800" "AT4G19410" "AT4G19810"
## [155] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G25900" "AT4G26270" "AT4G26670" "AT4G27130"
## [162] "AT4G27970" "AT4G28550" "AT4G33980" "AT4G33985" "AT4G34770" "AT4G34900" "AT4G36760"
## [169] "AT4G36770" "AT4G38540" "AT4G38545" "AT4G39230" "AT4G39270" "AT5G02260" "AT5G03460"
## [176] "AT5G06690" "AT5G08380" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G12930" "AT5G15640"
## [183] "AT5G18470" "AT5G18525" "AT5G18540" "AT5G20950" "AT5G23235" "AT5G23240" "AT5G23575"
## [190] "AT5G24470" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G34780" "AT5G37740" "AT5G38895"
## [197] "AT5G39410" "AT5G39580" "AT5G40240" "AT5G40760" "AT5G41260" "AT5G42900" "AT5G44010"
## [204] "AT5G46050" "AT5G46860" "AT5G46871" "AT5G48250" "AT5G48430" "AT5G49900" "AT5G50200"
## [211] "AT5G51570" "AT5G51790" "AT5G54930" "AT5G54960" "AT5G57110" "AT5G57220" "AT5G58600"
## [218] "AT5G58660" "AT5G59570" "AT5G60100" "AT5G61380" "AT5G61520" "AT5G61560" "AT5G62900"
## [225] "AT5G63810" "AT5G64860" "AT5G65600" "AT5G66052" "AT5G66053"
##
## $Down$`A1-V1`
## [1] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" "AT2G25730" "AT2G40080" "AT3G07650" "AT4G33980"
## [9] "AT5G42900" "AT5G48250" "AT5G59570" "AT5G60100"
##
## $Down$`M6-A6`
## [1] "AT1G01010" "AT1G01340" "AT1G01480" "AT1G01560" "AT1G01660" "AT1G01680" "AT1G01690"
## [8] "AT1G02220" "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450" "AT1G02470" "AT1G02500"
## [15] "AT1G02520" "AT1G02740" "AT1G02850" "AT1G02920" "AT1G03050" "AT1G03495" "AT1G03660"
## [22] "AT1G03940" "AT1G04490" "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340"
## [29] "AT1G05880" "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06620" "AT1G07000" "AT1G07500"
## [36] "AT1G07620" "AT1G08050" "AT1G08860" "AT1G09932" "AT1G10040" "AT1G10280" "AT1G10340"
## [43] "AT1G11330" "AT1G11905" "AT1G12160" "AT1G12200" "AT1G12210" "AT1G12290" "AT1G12320"
## [50] "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13470" "AT1G13520" "AT1G13540" "AT1G13550"
## [57] "AT1G14480" "AT1G14870" "AT1G15520" "AT1G15790" "AT1G16300" "AT1G16420" "AT1G16670"
## [64] "AT1G17340" "AT1G17380" "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17744" "AT1G17750"
## [71] "AT1G17830" "AT1G18570" "AT1G18890" "AT1G19020" "AT1G19250" "AT1G20310" "AT1G20460"
## [78] "AT1G21240" "AT1G21370" "AT1G21390" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22180"
## [85] "AT1G22220" "AT1G22400" "AT1G22403" "AT1G23200" "AT1G23840" "AT1G23850" "AT1G24140"
## [92] "AT1G24145" "AT1G25220" "AT1G25370" "AT1G26130" "AT1G26390" "AT1G27770" "AT1G28480"
## [99] "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30190" "AT1G30270" "AT1G30420"
## [106] "AT1G30620" "AT1G30850" "AT1G30900" "AT1G31290" "AT1G32330" "AT1G32870" "AT1G32940"
## [113] "AT1G32960" "AT1G33030" "AT1G33420" "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33800"
## [120] "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35210" "AT1G35230"
## [127] "AT1G35910" "AT1G43910" "AT1G44130" "AT1G47210" "AT1G47510" "AT1G47890" "AT1G48315"
## [134] "AT1G48320" "AT1G48605" "AT1G49050" "AT1G51640" "AT1G51645" "AT1G51660" "AT1G51670"
## [141] "AT1G51760" "AT1G51860" "AT1G51890" "AT1G51920" "AT1G52315" "AT1G52540" "AT1G52565"
## [148] "AT1G53620" "AT1G53625" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56600" "AT1G57560"
## [155] "AT1G57630" "AT1G57650" "AT1G59590" "AT1G60730" "AT1G61140" "AT1G61160" "AT1G61215"
## [162] "AT1G61250" "AT1G61260" "AT1G61340" "AT1G61370" "AT1G61420" "AT1G61550" "AT1G61640"
## [169] "AT1G61800" "AT1G61810" "AT1G62580" "AT1G63245" "AT1G63720" "AT1G63750" "AT1G63820"
## [176] "AT1G63840" "AT1G64065" "AT1G64400" "AT1G64610" "AT1G65481" "AT1G65483" "AT1G65690"
## [183] "AT1G65870" "AT1G66090" "AT1G66250" "AT1G66390" "AT1G66550" "AT1G66600" "AT1G66780"
## [190] "AT1G67060" "AT1G67070" "AT1G67635" "AT1G67650" "AT1G67800" "AT1G67810" "AT1G67820"
## [197] "AT1G67850" "AT1G67920" "AT1G68110" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68690"
## [204] "AT1G68710" "AT1G69260" "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69840" "AT1G69930"
## [211] "AT1G70170" "AT1G70690" "AT1G71390" "AT1G71690" "AT1G72000" "AT1G72240" "AT1G72540"
## [218] "AT1G72680" "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G73130"
## [225] "AT1G73805" "AT1G73810" "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74590" "AT1G74710"
## [232] "AT1G74750" "AT1G75060" "AT1G75170" "AT1G76040" "AT1G76620" "AT1G76760" "AT1G76970"
## [239] "AT1G76980" "AT1G77500" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78380" "AT1G78410"
## [246] "AT1G78780" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G80110" "AT1G80280" "AT1G80300"
## [253] "AT1G80450" "AT1G80610" "AT1G80830" "AT2G01300" "AT2G01818" "AT2G02310" "AT2G02340"
## [260] "AT2G02930" "AT2G04040" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495"
## [267] "AT2G04515" "AT2G05940" "AT2G12550" "AT2G13790" "AT2G13810" "AT2G14610" "AT2G14620"
## [274] "AT2G14878" "AT2G16720" "AT2G16900" "AT2G17220" "AT2G17440" "AT2G17500" "AT2G17720"
## [281] "AT2G18000" "AT2G18660" "AT2G18690" "AT2G19190" "AT2G19710" "AT2G20110" "AT2G20142"
## [288] "AT2G21188" "AT2G21470" "AT2G21510" "AT2G21780" "AT2G21790" "AT2G22200" "AT2G23680"
## [295] "AT2G23810" "AT2G24285" "AT2G24850" "AT2G25190" "AT2G25520" "AT2G25737" "AT2G26300"
## [302] "AT2G26390" "AT2G26400" "AT2G26480" "AT2G28210" "AT2G28400" "AT2G28570" "AT2G29100"
## [309] "AT2G29400" "AT2G29460" "AT2G29720" "AT2G29750" "AT2G29990" "AT2G30070" "AT2G30395"
## [316] "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018" "AT2G31020" "AT2G31270"
## [323] "AT2G31585" "AT2G31865" "AT2G31990" "AT2G32030" "AT2G32130" "AT2G32140" "AT2G32200"
## [330] "AT2G32210" "AT2G32430" "AT2G32460" "AT2G33110" "AT2G34070" "AT2G34500" "AT2G34580"
## [337] "AT2G34610" "AT2G34650" "AT2G35710" "AT2G36580" "AT2G36670" "AT2G36690" "AT2G37070"
## [344] "AT2G37260" "AT2G37440" "AT2G37750" "AT2G37980" "AT2G38290" "AT2G38490" "AT2G38500"
## [351] "AT2G38860" "AT2G39110" "AT2G39220" "AT2G39320" "AT2G39435" "AT2G39650" "AT2G40095"
## [358] "AT2G40140" "AT2G40670" "AT2G40740" "AT2G41010" "AT2G41100" "AT2G41380" "AT2G41410"
## [365] "AT2G41660" "AT2G41835" "AT2G41880" "AT2G42060" "AT2G42890" "AT2G42950" "AT2G43000"
## [372] "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43620" "AT2G43680" "AT2G44290" "AT2G44578"
## [379] "AT2G44600" "AT2G44910" "AT2G44940" "AT2G45220" "AT2G45400" "AT2G45760" "AT2G45920"
## [386] "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46450" "AT2G46620" "AT2G47000" "AT2G47130"
## [393] "AT2G47140" "AT2G47200" "AT2G47490" "AT2G47720" "AT2G47730" "AT2G47800" "AT2G47820"
## [400] "AT2G47950" "AT3G01290" "AT3G01820" "AT3G01830" "AT3G02610" "AT3G02770" "AT3G03310"
## [407] "AT3G03440" "AT3G03450" "AT3G03610" "AT3G04060" "AT3G04220" "AT3G04670" "AT3G05360"
## [414] "AT3G05500" "AT3G05650" "AT3G05830" "AT3G06890" "AT3G07370" "AT3G07390" "AT3G07700"
## [421] "AT3G07720" "AT3G08720" "AT3G08990" "AT3G09010" "AT3G09032" "AT3G09280" "AT3G09405"
## [428] "AT3G10500" "AT3G10540" "AT3G10815" "AT3G11010" "AT3G11080" "AT3G11220" "AT3G11340"
## [435] "AT3G11820" "AT3G11840" "AT3G12230" "AT3G12830" "AT3G12910" "AT3G13080" "AT3G13090"
## [442] "AT3G13100" "AT3G13380" "AT3G13433" "AT3G13610" "AT3G13900" "AT3G13910" "AT3G13950"
## [449] "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14470" "AT3G14475" "AT3G14590" "AT3G14700"
## [456] "AT3G14710" "AT3G14840" "AT3G14990" "AT3G15990" "AT3G16030" "AT3G16620" "AT3G16800"
## [463] "AT3G16980" "AT3G17240" "AT3G17420" "AT3G17520" "AT3G17690" "AT3G17800" "AT3G18250"
## [470] "AT3G19580" "AT3G19910" "AT3G19970" "AT3G20250" "AT3G21080" "AT3G21140" "AT3G21220"
## [477] "AT3G21240" "AT3G21320" "AT3G21520" "AT3G21530" "AT3G21560" "AT3G21700" "AT3G22160"
## [484] "AT3G22400" "AT3G22600" "AT3G22910" "AT3G22930" "AT3G23120" "AT3G23240" "AT3G24927"
## [491] "AT3G25010" "AT3G25070" "AT3G25250" "AT3G25290" "AT3G25510" "AT3G25610" "AT3G25870"
## [498] "AT3G25882" "AT3G25890" "AT3G26210" "AT3G26440" "AT3G26470" "AT3G26680" "AT3G26690"
## [505] "AT3G26830" "AT3G26840" "AT3G27560" "AT3G28340" "AT3G28510" "AT3G28540" "AT3G28580"
## [512] "AT3G28930" "AT3G29000" "AT3G29575" "AT3G44300" "AT3G44350" "AT3G44400" "AT3G44720"
## [519] "AT3G44830" "AT3G45040" "AT3G45330" "AT3G45410" "AT3G46080" "AT3G46090" "AT3G46510"
## [526] "AT3G46520" "AT3G46620" "AT3G47480" "AT3G47530" "AT3G47540" "AT3G47730" "AT3G47780"
## [533] "AT3G48020" "AT3G48090" "AT3G48240" "AT3G48490" "AT3G48630" "AT3G48640" "AT3G48650"
## [540] "AT3G48780" "AT3G48850" "AT3G49110" "AT3G49530" "AT3G49540" "AT3G50480" "AT3G50760"
## [547] "AT3G50770" "AT3G50800" "AT3G50930" "AT3G51330" "AT3G51350" "AT3G51860" "AT3G52430"
## [554] "AT3G52460" "AT3G52470" "AT3G52540" "AT3G52870" "AT3G53120" "AT3G53150" "AT3G53232"
## [561] "AT3G53235" "AT3G54150" "AT3G54640" "AT3G55470" "AT3G55500" "AT3G55730" "AT3G55880"
## [568] "AT3G55950" "AT3G56170" "AT3G56400" "AT3G56710" "AT3G56891" "AT3G57100" "AT3G57260"
## [575] "AT3G57330" "AT3G57380" "AT3G57460" "AT3G57880" "AT3G57950" "AT3G59700" "AT3G60110"
## [582] "AT3G60164" "AT3G60190" "AT3G60420" "AT3G60450" "AT3G60470" "AT3G60520" "AT3G60800"
## [589] "AT3G60966" "AT3G61190" "AT3G61198" "AT3G61390" "AT3G61960" "AT3G62260" "AT3G62760"
## [596] "AT3G63010" "AT3G63380" "AT4G00700" "AT4G00820" "AT4G00850" "AT4G01010" "AT4G01200"
## [603] "AT4G01360" "AT4G01430" "AT4G01535" "AT4G01540" "AT4G01895" "AT4G01950" "AT4G02220"
## [610] "AT4G02280" "AT4G02380" "AT4G02420" "AT4G02520" "AT4G02550" "AT4G02760" "AT4G03450"
## [617] "AT4G03460" "AT4G04220" "AT4G04221" "AT4G04223" "AT4G04490" "AT4G04500" "AT4G04510"
## [624] "AT4G04540" "AT4G04620" "AT4G04920" "AT4G05020" "AT4G05030" "AT4G05390" "AT4G08555"
## [631] "AT4G08770" "AT4G09300" "AT4G09570" "AT4G09770" "AT4G10390" "AT4G10500" "AT4G10955"
## [638] "AT4G10960" "AT4G11170" "AT4G11240" "AT4G11340" "AT4G11655" "AT4G11840" "AT4G11850"
## [645] "AT4G11890" "AT4G12120" "AT4G12500" "AT4G12720" "AT4G12735" "AT4G13180" "AT4G13820"
## [652] "AT4G13918" "AT4G13920" "AT4G14220" "AT4G14365" "AT4G14368" "AT4G14370" "AT4G14630"
## [659] "AT4G15270" "AT4G15280" "AT4G15417" "AT4G16260" "AT4G16350" "AT4G16600" "AT4G16820"
## [666] "AT4G16960" "AT4G17250" "AT4G17660" "AT4G17670" "AT4G18250" "AT4G18360" "AT4G18430"
## [673] "AT4G19370" "AT4G19925" "AT4G19970" "AT4G20110" "AT4G21400" "AT4G21610" "AT4G21840"
## [680] "AT4G21850" "AT4G21903" "AT4G22070" "AT4G22530" "AT4G22880" "AT4G22980" "AT4G23030"
## [687] "AT4G23150" "AT4G23210" "AT4G23300" "AT4G23310" "AT4G23450" "AT4G23470" "AT4G23610"
## [694] "AT4G23700" "AT4G24026" "AT4G24030" "AT4G24160" "AT4G25070" "AT4G25390" "AT4G25880"
## [701] "AT4G26060" "AT4G26120" "AT4G26270" "AT4G26400" "AT4G26470" "AT4G26910" "AT4G26970"
## [708] "AT4G26990" "AT4G27745" "AT4G27830" "AT4G28390" "AT4G29440" "AT4G29740" "AT4G29810"
## [715] "AT4G30230" "AT4G30430" "AT4G31230" "AT4G31860" "AT4G33050" "AT4G33300" "AT4G33925"
## [722] "AT4G34135" "AT4G34200" "AT4G34390" "AT4G34588" "AT4G34590" "AT4G35110" "AT4G35170"
## [729] "AT4G35180" "AT4G35380" "AT4G35500" "AT4G35600" "AT4G35630" "AT4G36430" "AT4G36640"
## [736] "AT4G36700" "AT4G36710" "AT4G36950" "AT4G36988" "AT4G36990" "AT4G37010" "AT4G37030"
## [743] "AT4G37370" "AT4G37640" "AT4G37900" "AT4G38540" "AT4G38545" "AT4G38560" "AT4G38940"
## [750] "AT4G39010" "AT4G39020" "AT4G39030" "AT4G39404" "AT4G39670" "AT4G39890" "AT4G39950"
## [757] "AT5G01040" "AT5G01050" "AT5G01250" "AT5G01340" "AT5G01490" "AT5G01610" "AT5G01640"
## [764] "AT5G01850" "AT5G01900" "AT5G01980" "AT5G02100" "AT5G02170" "AT5G02490" "AT5G03210"
## [771] "AT5G04720" "AT5G04860" "AT5G04930" "AT5G05460" "AT5G06330" "AT5G06610" "AT5G06760"
## [778] "AT5G07650" "AT5G07760" "AT5G08240" "AT5G09290" "AT5G09420" "AT5G09800" "AT5G09876"
## [785] "AT5G10380" "AT5G10520" "AT5G11030" "AT5G11210" "AT5G11650" "AT5G11870" "AT5G11920"
## [792] "AT5G12930" "AT5G13190" "AT5G13320" "AT5G14420" "AT5G14760" "AT5G14930" "AT5G16170"
## [799] "AT5G16480" "AT5G17060" "AT5G17330" "AT5G17350" "AT5G17380" "AT5G17760" "AT5G18270"
## [806] "AT5G18470" "AT5G20400" "AT5G20960" "AT5G22060" "AT5G22250" "AT5G22520" "AT5G22530"
## [813] "AT5G22540" "AT5G22545" "AT5G22630" "AT5G23160" "AT5G24200" "AT5G24205" "AT5G24206"
## [820] "AT5G24210" "AT5G24910" "AT5G25250" "AT5G25260" "AT5G25820" "AT5G25910" "AT5G25930"
## [827] "AT5G26170" "AT5G26690" "AT5G26920" "AT5G27610" "AT5G27760" "AT5G28919" "AT5G28920"
## [834] "AT5G35580" "AT5G38250" "AT5G38350" "AT5G38700" "AT5G38895" "AT5G38900" "AT5G39040"
## [841] "AT5G39090" "AT5G39610" "AT5G39670" "AT5G39680" "AT5G39785" "AT5G40300" "AT5G40730"
## [848] "AT5G41180" "AT5G41280" "AT5G41550" "AT5G41610" "AT5G41612" "AT5G41730" "AT5G41740"
## [855] "AT5G41750" "AT5G41940" "AT5G42010" "AT5G42050" "AT5G42380" "AT5G42440" "AT5G42800"
## [862] "AT5G43160" "AT5G43170" "AT5G43380" "AT5G43910" "AT5G44460" "AT5G44480" "AT5G44569"
## [869] "AT5G44570" "AT5G44585" "AT5G44820" "AT5G44990" "AT5G45000" "AT5G45070" "AT5G45080"
## [876] "AT5G45090" "AT5G45100" "AT5G45110" "AT5G45440" "AT5G45475" "AT5G45480" "AT5G45500"
## [883] "AT5G45510" "AT5G45630" "AT5G45840" "AT5G46230" "AT5G46410" "AT5G46520" "AT5G46960"
## [890] "AT5G47070" "AT5G47130" "AT5G47140" "AT5G47730" "AT5G47960" "AT5G48400" "AT5G48410"
## [897] "AT5G49280" "AT5G49680" "AT5G51630" "AT5G51740" "AT5G51830" "AT5G52020" "AT5G52570"
## [904] "AT5G52720" "AT5G52730" "AT5G52750" "AT5G52760" "AT5G52770" "AT5G52800" "AT5G52810"
## [911] "AT5G52820" "AT5G53588" "AT5G53590" "AT5G53830" "AT5G54140" "AT5G54490" "AT5G54700"
## [918] "AT5G54710" "AT5G54720" "AT5G54840" "AT5G55420" "AT5G55450" "AT5G55460" "AT5G56050"
## [925] "AT5G56340" "AT5G56960" "AT5G57150" "AT5G57510" "AT5G57910" "AT5G58620" "AT5G58940"
## [932] "AT5G59220" "AT5G59490" "AT5G59530" "AT5G59570" "AT5G59820" "AT5G60280" "AT5G60285"
## [939] "AT5G60790" "AT5G60800" "AT5G60900" "AT5G60930" "AT5G61010" "AT5G61070" "AT5G61250"
## [946] "AT5G61390" "AT5G61430" "AT5G61900" "AT5G61910" "AT5G62020" "AT5G62150" "AT5G62180"
## [953] "AT5G62770" "AT5G63225" "AT5G64250" "AT5G64530" "AT5G64780" "AT5G64810" "AT5G64870"
## [960] "AT5G65090" "AT5G66620" "AT5G66630" "AT5G66640" "AT5G66650" "AT5G66658" "AT5G66890"
## [967] "AT5G66910" "AT5G67080" "AT5G67340" "AT5G67350" "AT5G67470" "AT5G67600"
##
## $Down$`M6-V6`
## [1] "AT1G01010" "AT1G01680" "AT1G02520" "AT1G04490" "AT1G05100" "AT1G05840" "AT1G07500"
## [8] "AT1G07570" "AT1G09932" "AT1G11400" "AT1G13330" "AT1G13340" "AT1G15350" "AT1G17380"
## [15] "AT1G17750" "AT1G17830" "AT1G19180" "AT1G19540" "AT1G19640" "AT1G19680" "AT1G20310"
## [22] "AT1G20460" "AT1G23850" "AT1G26770" "AT1G26930" "AT1G30100" "AT1G30850" "AT1G31770"
## [29] "AT1G31900" "AT1G32870" "AT1G33950" "AT1G34180" "AT1G43910" "AT1G48605" "AT1G49530"
## [36] "AT1G51760" "AT1G51860" "AT1G52565" "AT1G52890" "AT1G54010" "AT1G54095" "AT1G55610"
## [43] "AT1G58030" "AT1G60190" "AT1G60730" "AT1G61120" "AT1G65845" "AT1G65890" "AT1G66280"
## [50] "AT1G66350" "AT1G69260" "AT1G69480" "AT1G69530" "AT1G71110" "AT1G71390" "AT1G72540"
## [57] "AT1G72770" "AT1G73130" "AT1G74100" "AT1G74430" "AT1G74710" "AT1G77280" "AT1G78290"
## [64] "AT1G79270" "AT1G80110" "AT1G80280" "AT1G80840" "AT2G01830" "AT2G06255" "AT2G15760"
## [71] "AT2G16650" "AT2G16720" "AT2G17500" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G26480"
## [78] "AT2G27228" "AT2G27230" "AT2G28450" "AT2G28570" "AT2G30070" "AT2G30820" "AT2G30830"
## [85] "AT2G34070" "AT2G35950" "AT2G37440" "AT2G38250" "AT2G38500" "AT2G38800" "AT2G40460"
## [92] "AT2G40670" "AT2G42760" "AT2G42890" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680"
## [99] "AT2G44578" "AT2G44600" "AT2G44840" "AT2G44940" "AT2G45920" "AT2G46510" "AT2G46520"
## [106] "AT2G46660" "AT2G46900" "AT2G47420" "AT2G47950" "AT3G01770" "AT3G06490" "AT3G06890"
## [113] "AT3G11450" "AT3G11480" "AT3G12920" "AT3G13080" "AT3G13610" "AT3G14440" "AT3G14680"
## [120] "AT3G16310" "AT3G16620" "AT3G17120" "AT3G17510" "AT3G21080" "AT3G21500" "AT3G21700"
## [127] "AT3G22275" "AT3G22290" "AT3G25510" "AT3G25890" "AT3G26440" "AT3G26470" "AT3G27170"
## [134] "AT3G27415" "AT3G27416" "AT3G27809" "AT3G27810" "AT3G28510" "AT3G28580" "AT3G46658"
## [141] "AT3G46660" "AT3G47420" "AT3G47730" "AT3G48100" "AT3G48115" "AT3G48520" "AT3G48580"
## [148] "AT3G48780" "AT3G51670" "AT3G54320" "AT3G54366" "AT3G56170" "AT3G57260" "AT3G57950"
## [155] "AT3G61198" "AT3G61890" "AT3G63010" "AT4G00700" "AT4G01540" "AT4G02380" "AT4G02760"
## [162] "AT4G03460" "AT4G04223" "AT4G04510" "AT4G06744" "AT4G10390" "AT4G11240" "AT4G12500"
## [169] "AT4G15430" "AT4G15780" "AT4G16260" "AT4G17660" "AT4G17730" "AT4G22070" "AT4G23150"
## [176] "AT4G23310" "AT4G23420" "AT4G25390" "AT4G25433" "AT4G26080" "AT4G26120" "AT4G26470"
## [183] "AT4G27860" "AT4G27870" "AT4G29380" "AT4G29930" "AT4G34650" "AT4G35720" "AT4G36780"
## [190] "AT4G36950" "AT4G37850" "AT4G38560" "AT4G39950" "AT5G01840" "AT5G01850" "AT5G02100"
## [197] "AT5G04860" "AT5G05680" "AT5G06110" "AT5G08620" "AT5G11390" "AT5G13220" "AT5G13320"
## [204] "AT5G13820" "AT5G14090" "AT5G14390" "AT5G14700" "AT5G15190" "AT5G16360" "AT5G17330"
## [211] "AT5G17760" "AT5G19110" "AT5G21280" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G26270"
## [218] "AT5G26920" "AT5G28919" "AT5G28920" "AT5G38130" "AT5G39670" "AT5G40210" "AT5G41315"
## [225] "AT5G41610" "AT5G41612" "AT5G44350" "AT5G44990" "AT5G45090" "AT5G46410" "AT5G46840"
## [232] "AT5G47960" "AT5G49280" "AT5G53290" "AT5G53360" "AT5G54240" "AT5G54700" "AT5G56050"
## [239] "AT5G58620" "AT5G59220" "AT5G59480" "AT5G59590" "AT5G60800" "AT5G60890" "AT5G61960"
## [246] "AT5G62190" "AT5G63225" "AT5G63450" "AT5G64530" "AT5G65280" "AT5G66053" "AT5G66650"
## [253] "AT5G67160" "AT5G67200"
##
## $Down$`A6-V6`
## [1] "AT1G16400" "AT1G34210" "AT1G49530" "AT1G54095" "AT1G66280" "AT1G73210" "AT1G74430" "AT2G01830"
## [9] "AT2G06255" "AT2G22200" "AT2G40460" "AT3G21670" "AT3G27170" "AT3G43270" "AT3G47750" "AT3G61420"
## [17] "AT5G01840" "AT5G11160" "AT5G21280" "AT5G24280" "AT5G26270" "AT5G60890" "AT5G63450"
##
## $Down$`M12-A12`
## [1] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01560" "AT1G01680" "AT1G02220"
## [8] "AT1G02230" "AT1G02405" "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02660" "AT1G02750"
## [15] "AT1G03050" "AT1G03180" "AT1G03210" "AT1G03290" "AT1G03400" "AT1G03660" "AT1G03850"
## [22] "AT1G04310" "AT1G04490" "AT1G04780" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570"
## [29] "AT1G05680" "AT1G05880" "AT1G06180" "AT1G06620" "AT1G06660" "AT1G07000" "AT1G07020"
## [36] "AT1G07430" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07620" "AT1G07630" "AT1G08050"
## [43] "AT1G08630" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09350" "AT1G09500"
## [50] "AT1G09560" "AT1G10070" "AT1G10340" "AT1G10410" "AT1G10710" "AT1G11330" "AT1G11400"
## [57] "AT1G11480" "AT1G11905" "AT1G12320" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13550"
## [64] "AT1G13990" "AT1G14330" "AT1G14870" "AT1G15380" "AT1G15415" "AT1G15520" "AT1G15790"
## [71] "AT1G15800" "AT1G16150" "AT1G16300" "AT1G16670" "AT1G17020" "AT1G17380" "AT1G17490"
## [78] "AT1G17500" "AT1G17600" "AT1G17750" "AT1G18890" "AT1G19020" "AT1G19160" "AT1G19180"
## [85] "AT1G19200" "AT1G19250" "AT1G19270" "AT1G19640" "AT1G20310" "AT1G20780" "AT1G21000"
## [92] "AT1G21200" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21520" "AT1G21525" "AT1G21740"
## [99] "AT1G22180" "AT1G22220" "AT1G22280" "AT1G22400" "AT1G22403" "AT1G22470" "AT1G22480"
## [106] "AT1G22510" "AT1G22840" "AT1G23040" "AT1G23120" "AT1G23550" "AT1G23840" "AT1G23850"
## [113] "AT1G24145" "AT1G24147" "AT1G24150" "AT1G25400" "AT1G26130" "AT1G26290" "AT1G26380"
## [120] "AT1G26690" "AT1G26930" "AT1G27110" "AT1G27300" "AT1G27980" "AT1G28190" "AT1G28480"
## [127] "AT1G29195" "AT1G29240" "AT1G29640" "AT1G30040" "AT1G30135" "AT1G30220" "AT1G30270"
## [134] "AT1G30280" "AT1G30473" "AT1G30620" "AT1G30755" "AT1G30814" "AT1G30850" "AT1G30900"
## [141] "AT1G31290" "AT1G31540" "AT1G31550" "AT1G31900" "AT1G32210" "AT1G32350" "AT1G32560"
## [148] "AT1G32870" "AT1G32910" "AT1G32920" "AT1G32940" "AT1G32960" "AT1G33030" "AT1G33420"
## [155] "AT1G33430" "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33950" "AT1G33960" "AT1G34180"
## [162] "AT1G34420" "AT1G34750" "AT1G35210" "AT1G35580" "AT1G35910" "AT1G36622" "AT1G42980"
## [169] "AT1G43160" "AT1G43910" "AT1G44130" "AT1G45145" "AT1G47056" "AT1G47510" "AT1G48315"
## [176] "AT1G48320" "AT1G48370" "AT1G48605" "AT1G49050" "AT1G49450" "AT1G49900" "AT1G50420"
## [183] "AT1G50740" "AT1G51130" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51790" "AT1G51860"
## [190] "AT1G52200" "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52855" "AT1G52890" "AT1G53100"
## [197] "AT1G53620" "AT1G53625" "AT1G53830" "AT1G53920" "AT1G54100" "AT1G54570" "AT1G54575"
## [204] "AT1G54890" "AT1G55610" "AT1G55790" "AT1G56550" "AT1G56660" "AT1G57560" "AT1G57630"
## [211] "AT1G57650" "AT1G59740" "AT1G60190" "AT1G60420" "AT1G60610" "AT1G60730" "AT1G60890"
## [218] "AT1G61065" "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61415"
## [225] "AT1G61420" "AT1G61560" "AT1G61800" "AT1G61810" "AT1G61820" "AT1G62300" "AT1G62570"
## [232] "AT1G62580" "AT1G62840" "AT1G63245" "AT1G63440" "AT1G63460" "AT1G63720" "AT1G63740"
## [239] "AT1G63820" "AT1G64610" "AT1G64660" "AT1G65483" "AT1G65490" "AT1G65610" "AT1G66170"
## [246] "AT1G66410" "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725"
## [253] "AT1G67060" "AT1G67070" "AT1G67190" "AT1G67520" "AT1G67635" "AT1G67650" "AT1G67810"
## [260] "AT1G67850" "AT1G67970" "AT1G67980" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68440"
## [267] "AT1G68620" "AT1G68710" "AT1G68740" "AT1G68820" "AT1G69050" "AT1G69260" "AT1G69480"
## [274] "AT1G69490" "AT1G69520" "AT1G69610" "AT1G69720" "AT1G69840" "AT1G69930" "AT1G70480"
## [281] "AT1G70690" "AT1G70810" "AT1G71100" "AT1G71690" "AT1G71697" "AT1G72000" "AT1G72120"
## [288] "AT1G72240" "AT1G72330" "AT1G72420" "AT1G72680" "AT1G72690" "AT1G72770" "AT1G72890"
## [295] "AT1G72900" "AT1G72920" "AT1G72940" "AT1G73010" "AT1G73805" "AT1G73810" "AT1G73965"
## [302] "AT1G74080" "AT1G74100" "AT1G74360" "AT1G74710" "AT1G75170" "AT1G75510" "AT1G75830"
## [309] "AT1G76040" "AT1G76070" "AT1G76240" "AT1G76590" "AT1G76650" "AT1G76760" "AT1G76970"
## [316] "AT1G76980" "AT1G77000" "AT1G77145" "AT1G77280" "AT1G77500" "AT1G77885" "AT1G77890"
## [323] "AT1G78190" "AT1G78380" "AT1G78410" "AT1G78570" "AT1G78780" "AT1G79400" "AT1G79450"
## [330] "AT1G79680" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450" "AT1G80580"
## [337] "AT1G80590" "AT1G80610" "AT1G80840" "AT2G01340" "AT2G01540" "AT2G01650" "AT2G01818"
## [344] "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02390" "AT2G02870"
## [351] "AT2G03270" "AT2G03760" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04900"
## [358] "AT2G05320" "AT2G05630" "AT2G05940" "AT2G06255" "AT2G07687" "AT2G13790" "AT2G13810"
## [365] "AT2G13960" "AT2G14560" "AT2G15760" "AT2G15860" "AT2G16060" "AT2G16700" "AT2G16710"
## [372] "AT2G16720" "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17500" "AT2G17720"
## [379] "AT2G18000" "AT2G18660" "AT2G18690" "AT2G19690" "AT2G19710" "AT2G20110" "AT2G20142"
## [386] "AT2G21188" "AT2G21470" "AT2G21780" "AT2G21850" "AT2G22500" "AT2G22560" "AT2G23030"
## [393] "AT2G23110" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23680" "AT2G23790" "AT2G23810"
## [400] "AT2G24040" "AT2G24240" "AT2G24285" "AT2G24850" "AT2G25190" "AT2G25460" "AT2G25520"
## [407] "AT2G25625" "AT2G25737" "AT2G26290" "AT2G26300" "AT2G26400" "AT2G26480" "AT2G26530"
## [414] "AT2G27389" "AT2G27510" "AT2G27690" "AT2G27920" "AT2G28110" "AT2G28400" "AT2G28570"
## [421] "AT2G28890" "AT2G29070" "AT2G29350" "AT2G29400" "AT2G29460" "AT2G29470" "AT2G29480"
## [428] "AT2G29720" "AT2G29990" "AT2G30080" "AT2G30140" "AT2G30395" "AT2G30400" "AT2G30550"
## [435] "AT2G30750" "AT2G30770" "AT2G31020" "AT2G31200" "AT2G31305" "AT2G31390" "AT2G31570"
## [442] "AT2G31865" "AT2G31870" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32160"
## [449] "AT2G32210" "AT2G32460" "AT2G33380" "AT2G33520" "AT2G34070" "AT2G34500" "AT2G34600"
## [456] "AT2G34940" "AT2G35730" "AT2G35810" "AT2G35940" "AT2G36640" "AT2G37110" "AT2G37440"
## [463] "AT2G37750" "AT2G37760" "AT2G37870" "AT2G37980" "AT2G38240" "AT2G38250" "AT2G38490"
## [470] "AT2G38860" "AT2G39110" "AT2G39210" "AT2G39320" "AT2G39518" "AT2G39520" "AT2G40140"
## [477] "AT2G40340" "AT2G40435" "AT2G41070" "AT2G41100" "AT2G41380" "AT2G41410" "AT2G41835"
## [484] "AT2G42350" "AT2G42560" "AT2G42950" "AT2G43000" "AT2G43140" "AT2G43320" "AT2G43570"
## [491] "AT2G44180" "AT2G44578" "AT2G44600" "AT2G45170" "AT2G45210" "AT2G45330" "AT2G45500"
## [498] "AT2G45570" "AT2G45660" "AT2G45760" "AT2G45770" "AT2G46270" "AT2G46430" "AT2G46510"
## [505] "AT2G46620" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46940" "AT2G46980" "AT2G47000"
## [512] "AT2G47130" "AT2G47140" "AT2G47190" "AT2G47200" "AT2G47560" "AT2G47820" "AT2G47950"
## [519] "AT3G01290" "AT3G01840" "AT3G01970" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02770"
## [526] "AT3G02800" "AT3G03310" "AT3G03440" "AT3G03470" "AT3G03490" "AT3G03560" "AT3G03610"
## [533] "AT3G03650" "AT3G04000" "AT3G04060" "AT3G04070" "AT3G04420" "AT3G04640" "AT3G05330"
## [540] "AT3G05360" "AT3G05390" "AT3G05500" "AT3G05830" "AT3G05870" "AT3G06320" "AT3G06420"
## [547] "AT3G06490" "AT3G06890" "AT3G07370" "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720"
## [554] "AT3G08760" "AT3G08990" "AT3G09280" "AT3G09490" "AT3G09830" "AT3G09910" "AT3G10010"
## [561] "AT3G10320" "AT3G10490" "AT3G10500" "AT3G10640" "AT3G10815" "AT3G11000" "AT3G11040"
## [568] "AT3G11330" "AT3G11340" "AT3G11480" "AT3G11580" "AT3G11820" "AT3G11840" "AT3G12040"
## [575] "AT3G12220" "AT3G12230" "AT3G12320" "AT3G12510" "AT3G12760" "AT3G12830" "AT3G13080"
## [582] "AT3G13100" "AT3G13235" "AT3G13380" "AT3G13430" "AT3G13610" "AT3G13730" "AT3G13910"
## [589] "AT3G13950" "AT3G14050" "AT3G14060" "AT3G14280" "AT3G14430" "AT3G14440" "AT3G14560"
## [596] "AT3G14590" "AT3G14680" "AT3G14700" "AT3G14840" "AT3G15355" "AT3G15500" "AT3G15518"
## [603] "AT3G15534" "AT3G15760" "AT3G15770" "AT3G16150" "AT3G16330" "AT3G16980" "AT3G16990"
## [610] "AT3G17000" "AT3G17420" "AT3G17690" "AT3G17790" "AT3G17800" "AT3G17810" "AT3G17820"
## [617] "AT3G18240" "AT3G18250" "AT3G18260" "AT3G18560" "AT3G19270" "AT3G19390" "AT3G19580"
## [624] "AT3G19615" "AT3G19910" "AT3G21080" "AT3G21295" "AT3G21700" "AT3G21810" "AT3G22160"
## [631] "AT3G22370" "AT3G22560" "AT3G22910" "AT3G23120" "AT3G24320" "AT3G25250" "AT3G25290"
## [638] "AT3G25400" "AT3G25510" "AT3G25870" "AT3G25882" "AT3G26090" "AT3G26210" "AT3G26220"
## [645] "AT3G26440" "AT3G26470" "AT3G26600" "AT3G26690" "AT3G26830" "AT3G26840" "AT3G27210"
## [652] "AT3G27290" "AT3G27415" "AT3G27416" "AT3G28007" "AT3G28210" "AT3G28340" "AT3G28480"
## [659] "AT3G28540" "AT3G28580" "AT3G28850" "AT3G28930" "AT3G29240" "AT3G29250" "AT3G29575"
## [666] "AT3G43250" "AT3G44300" "AT3G44400" "AT3G44490" "AT3G44830" "AT3G44860" "AT3G45130"
## [673] "AT3G45620" "AT3G46080" "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46690" "AT3G46930"
## [680] "AT3G47340" "AT3G47480" "AT3G47490" "AT3G47530" "AT3G47540" "AT3G47780" "AT3G48020"
## [687] "AT3G48080" "AT3G48090" "AT3G48240" "AT3G48520" "AT3G48570" "AT3G48580" "AT3G48630"
## [694] "AT3G48640" "AT3G48770" "AT3G49110" "AT3G49130" "AT3G49540" "AT3G49645" "AT3G50260"
## [701] "AT3G50470" "AT3G50480" "AT3G50550" "AT3G50770" "AT3G50800" "AT3G50900" "AT3G50910"
## [708] "AT3G51090" "AT3G51250" "AT3G51330" "AT3G51430" "AT3G51440" "AT3G51660" "AT3G51670"
## [715] "AT3G51750" "AT3G51890" "AT3G52110" "AT3G52310" "AT3G52430" "AT3G52460" "AT3G52540"
## [722] "AT3G52740" "AT3G52742" "AT3G52748" "AT3G52770" "AT3G52870" "AT3G53120" "AT3G53150"
## [729] "AT3G53230" "AT3G53232" "AT3G53235" "AT3G54150" "AT3G54320" "AT3G54950" "AT3G55470"
## [736] "AT3G55640" "AT3G55730" "AT3G55880" "AT3G56170" "AT3G56400" "AT3G56870" "AT3G56891"
## [743] "AT3G57010" "AT3G57090" "AT3G57380" "AT3G57450" "AT3G57460" "AT3G57480" "AT3G57550"
## [750] "AT3G57880" "AT3G57950" "AT3G58600" "AT3G59100" "AT3G60110" "AT3G60160" "AT3G60180"
## [757] "AT3G60420" "AT3G60450" "AT3G60470" "AT3G60520" "AT3G60961" "AT3G60966" "AT3G61185"
## [764] "AT3G61190" "AT3G61198" "AT3G61280" "AT3G61390" "AT3G61450" "AT3G61890" "AT3G61930"
## [771] "AT3G62590" "AT3G63010" "AT3G63030" "AT3G63050" "AT3G63060" "AT3G63380" "AT4G00234"
## [778] "AT4G00240" "AT4G00550" "AT4G01010" "AT4G01360" "AT4G01430" "AT4G01540" "AT4G01895"
## [785] "AT4G02220" "AT4G02380" "AT4G02550" "AT4G02660" "AT4G02730" "AT4G02880" "AT4G03320"
## [792] "AT4G04620" "AT4G04910" "AT4G05010" "AT4G05020" "AT4G05030" "AT4G05497" "AT4G08290"
## [799] "AT4G08770" "AT4G09300" "AT4G09460" "AT4G09570" "AT4G10390" "AT4G10955" "AT4G10960"
## [806] "AT4G11070" "AT4G11170" "AT4G11655" "AT4G11840" "AT4G11850" "AT4G11890" "AT4G12120"
## [813] "AT4G12410" "AT4G12720" "AT4G12735" "AT4G13820" "AT4G14365" "AT4G14368" "AT4G14370"
## [820] "AT4G14610" "AT4G15070" "AT4G15200" "AT4G15417" "AT4G15420" "AT4G16000" "AT4G16690"
## [827] "AT4G16820" "AT4G17500" "AT4G17660" "AT4G17900" "AT4G18170" "AT4G18360" "AT4G18430"
## [834] "AT4G18950" "AT4G18980" "AT4G19045" "AT4G19970" "AT4G20110" "AT4G20325" "AT4G21120"
## [841] "AT4G21380" "AT4G21440" "AT4G21534" "AT4G21580" "AT4G21610" "AT4G21680" "AT4G21830"
## [848] "AT4G21840" "AT4G21850" "AT4G21926" "AT4G21930" "AT4G21980" "AT4G22070" "AT4G22305"
## [855] "AT4G22520" "AT4G22530" "AT4G22590" "AT4G22592" "AT4G22920" "AT4G22970" "AT4G22980"
## [862] "AT4G23270" "AT4G23271" "AT4G23450" "AT4G23470" "AT4G23610" "AT4G23700" "AT4G23885"
## [869] "AT4G24026" "AT4G24030" "AT4G24040" "AT4G24110" "AT4G24340" "AT4G24970" "AT4G24990"
## [876] "AT4G25070" "AT4G25390" "AT4G25480" "AT4G25610" "AT4G25690" "AT4G25692" "AT4G25845"
## [883] "AT4G26060" "AT4G26070" "AT4G26080" "AT4G26120" "AT4G26200" "AT4G26270" "AT4G26470"
## [890] "AT4G26810" "AT4G26990" "AT4G27410" "AT4G27745" "AT4G27830" "AT4G28390" "AT4G28485"
## [897] "AT4G28570" "AT4G29040" "AT4G29740" "AT4G29810" "AT4G29950" "AT4G30390" "AT4G31800"
## [904] "AT4G31860" "AT4G32870" "AT4G33050" "AT4G33150" "AT4G33300" "AT4G33355" "AT4G33467"
## [911] "AT4G34120" "AT4G34131" "AT4G34200" "AT4G34390" "AT4G35110" "AT4G35170" "AT4G35180"
## [918] "AT4G35500" "AT4G35590" "AT4G35600" "AT4G35840" "AT4G36090" "AT4G36150" "AT4G36380"
## [925] "AT4G36700" "AT4G36710" "AT4G36820" "AT4G36950" "AT4G36988" "AT4G36990" "AT4G37010"
## [932] "AT4G37030" "AT4G37150" "AT4G37370" "AT4G37390" "AT4G37900" "AT4G37990" "AT4G38060"
## [939] "AT4G38260" "AT4G39030" "AT4G39190" "AT4G39380" "AT4G39404" "AT4G39610" "AT4G39670"
## [946] "AT4G39740" "AT4G39780" "AT4G39890" "AT5G01050" "AT5G01100" "AT5G01210" "AT5G01215"
## [953] "AT5G01380" "AT5G01550" "AT5G01610" "AT5G01640" "AT5G01820" "AT5G01850" "AT5G02020"
## [960] "AT5G02100" "AT5G02320" "AT5G02490" "AT5G02502" "AT5G02590" "AT5G02600" "AT5G03210"
## [967] "AT5G04010" "AT5G04180" "AT5G04250" "AT5G04720" "AT5G04860" "AT5G04910" "AT5G05460"
## [974] "AT5G05730" "AT5G06090" "AT5G06310" "AT5G06750" "AT5G06760" "AT5G07010" "AT5G07070"
## [981] "AT5G07322" "AT5G07440" "AT5G07650" "AT5G07780" "AT5G08240" "AT5G08630" "AT5G08760"
## [988] "AT5G08790" "AT5G09290" "AT5G09876" "AT5G10340" "AT5G10440" "AT5G10625" "AT5G10695"
## [995] "AT5G11210" "AT5G11500" "AT5G11520" "AT5G11650" "AT5G11860" "AT5G11870"
## [ reached getOption("max.print") -- omitted 283 entries ]
##
## $Down$`M12-V12`
## [1] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" "AT1G01480" "AT1G01560" "AT1G01720"
## [8] "AT1G02205" "AT1G02220" "AT1G02230" "AT1G02400" "AT1G02405" "AT1G02460" "AT1G02750"
## [15] "AT1G04310" "AT1G04780" "AT1G05100" "AT1G05680" "AT1G05710" "AT1G05880" "AT1G06000"
## [22] "AT1G06002" "AT1G06570" "AT1G06620" "AT1G07430" "AT1G07500" "AT1G07590" "AT1G07600"
## [29] "AT1G07610" "AT1G07670" "AT1G08050" "AT1G08920" "AT1G09530" "AT1G09950" "AT1G10230"
## [36] "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585" "AT1G11400" "AT1G11480" "AT1G12320"
## [43] "AT1G12420" "AT1G12540" "AT1G13280" "AT1G13330" "AT1G13340" "AT1G13740" "AT1G13920"
## [50] "AT1G13930" "AT1G13990" "AT1G14120" "AT1G15100" "AT1G15110" "AT1G15405" "AT1G15415"
## [57] "AT1G15420" "AT1G15430" "AT1G15670" "AT1G16300" "AT1G16850" "AT1G17380" "AT1G17420"
## [64] "AT1G17500" "AT1G17550" "AT1G17750" "AT1G17940" "AT1G19160" "AT1G19180" "AT1G19270"
## [71] "AT1G19490" "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G20030" "AT1G20070"
## [78] "AT1G20310" "AT1G20450" "AT1G20970" "AT1G21000" "AT1G21520" "AT1G21550" "AT1G22400"
## [85] "AT1G22470" "AT1G22480" "AT1G22770" "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23850"
## [92] "AT1G24147" "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500" "AT1G26730" "AT1G26762"
## [99] "AT1G26770" "AT1G26920" "AT1G26930" "AT1G27300" "AT1G27730" "AT1G27760" "AT1G28010"
## [106] "AT1G28050" "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29195" "AT1G29290" "AT1G29330"
## [113] "AT1G30040" "AT1G30135" "AT1G30240" "AT1G30320" "AT1G30620" "AT1G30814" "AT1G30850"
## [120] "AT1G31120" "AT1G31290" "AT1G31900" "AT1G32560" "AT1G32640" "AT1G32870" "AT1G32910"
## [127] "AT1G33110" "AT1G34180" "AT1G34420" "AT1G35210" "AT1G42980" "AT1G43160" "AT1G43245"
## [134] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G45145" "AT1G47510" "AT1G48000"
## [141] "AT1G48100" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G49050" "AT1G49450" "AT1G49520"
## [148] "AT1G50260" "AT1G50640" "AT1G51140" "AT1G51760" "AT1G51780" "AT1G52030" "AT1G52315"
## [155] "AT1G52565" "AT1G52690" "AT1G52720" "AT1G52760" "AT1G52890" "AT1G53320" "AT1G53560"
## [162] "AT1G53620" "AT1G53625" "AT1G53760" "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100"
## [169] "AT1G54120" "AT1G54570" "AT1G54890" "AT1G56580" "AT1G57610" "AT1G57630" "AT1G58270"
## [176] "AT1G58360" "AT1G59640" "AT1G59740" "AT1G60190" "AT1G60270" "AT1G61065" "AT1G61110"
## [183] "AT1G61140" "AT1G61215" "AT1G61340" "AT1G61610" "AT1G61640" "AT1G61890" "AT1G62840"
## [190] "AT1G64380" "AT1G64610" "AT1G64620" "AT1G64660" "AT1G64670" "AT1G65610" "AT1G66170"
## [197] "AT1G66280" "AT1G66550" "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66780" "AT1G67420"
## [204] "AT1G68250" "AT1G68340" "AT1G68390" "AT1G68500" "AT1G69260" "AT1G69480" "AT1G69600"
## [211] "AT1G69610" "AT1G69870" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [218] "AT1G70800" "AT1G70810" "AT1G71100" "AT1G71690" "AT1G71697" "AT1G72120" "AT1G72210"
## [225] "AT1G72240" "AT1G72330" "AT1G72520" "AT1G72680" "AT1G72690" "AT1G72770" "AT1G72890"
## [232] "AT1G72900" "AT1G72920" "AT1G72940" "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73805"
## [239] "AT1G74080" "AT1G74100" "AT1G74710" "AT1G74950" "AT1G75370" "AT1G75400" "AT1G75440"
## [246] "AT1G75450" "AT1G75580" "AT1G76070" "AT1G76180" "AT1G76240" "AT1G76380" "AT1G76590"
## [253] "AT1G76640" "AT1G76650" "AT1G76980" "AT1G77280" "AT1G77450" "AT1G77500" "AT1G77680"
## [260] "AT1G77885" "AT1G77890" "AT1G78070" "AT1G78080" "AT1G78210" "AT1G78570" "AT1G79270"
## [267] "AT1G79400" "AT1G79520" "AT1G79570" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300"
## [274] "AT1G80450" "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80820" "AT1G80840" "AT1G80850"
## [281] "AT2G01340" "AT2G01450" "AT2G01890" "AT2G02310" "AT2G02340" "AT2G02870" "AT2G03470"
## [288] "AT2G03760" "AT2G03980" "AT2G05260" "AT2G06050" "AT2G06255" "AT2G13650" "AT2G13960"
## [295] "AT2G14290" "AT2G15760" "AT2G16720" "AT2G17500" "AT2G17720" "AT2G18090" "AT2G18196"
## [302] "AT2G20880" "AT2G21780" "AT2G22200" "AT2G22330" "AT2G22500" "AT2G22770" "AT2G23110"
## [309] "AT2G23340" "AT2G23450" "AT2G23760" "AT2G24210" "AT2G24850" "AT2G25130" "AT2G25460"
## [316] "AT2G25625" "AT2G26480" "AT2G26530" "AT2G27310" "AT2G27500" "AT2G27510" "AT2G27690"
## [323] "AT2G27830" "AT2G28400" "AT2G28570" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29670"
## [330] "AT2G30020" "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395" "AT2G30400"
## [337] "AT2G30540" "AT2G30550" "AT2G30720" "AT2G30820" "AT2G30830" "AT2G31180" "AT2G32130"
## [344] "AT2G32140" "AT2G32150" "AT2G32235" "AT2G32510" "AT2G32990" "AT2G33380" "AT2G34010"
## [351] "AT2G34070" "AT2G34080" "AT2G34500" "AT2G34600" "AT2G35550" "AT2G35710" "AT2G35730"
## [358] "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36380" "AT2G36590" "AT2G36640" "AT2G36815"
## [365] "AT2G36830" "AT2G36854" "AT2G37170" "AT2G37180" "AT2G37750" "AT2G37760" "AT2G37770"
## [372] "AT2G37870" "AT2G37980" "AT2G38240" "AT2G38250" "AT2G38490" "AT2G38500" "AT2G38640"
## [379] "AT2G38750" "AT2G38760" "AT2G39030" "AT2G39210" "AT2G39250" "AT2G39350" "AT2G39520"
## [386] "AT2G39800" "AT2G39980" "AT2G40140" "AT2G40435" "AT2G40620" "AT2G41410" "AT2G41540"
## [393] "AT2G41730" "AT2G41870" "AT2G42150" "AT2G42530" "AT2G42560" "AT2G42760" "AT2G43018"
## [400] "AT2G43020" "AT2G43320" "AT2G43535" "AT2G44578" "AT2G44600" "AT2G44840" "AT2G45210"
## [407] "AT2G45760" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46510" "AT2G46520" "AT2G46670"
## [414] "AT2G46680" "AT2G46790" "AT2G47000" "AT2G47140" "AT2G47180" "AT2G47260" "AT2G47560"
## [421] "AT2G47770" "AT2G47950" "AT3G01280" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02510"
## [428] "AT3G02875" "AT3G02990" "AT3G03310" "AT3G03440" "AT3G03950" "AT3G04000" "AT3G04010"
## [435] "AT3G04060" "AT3G04420" "AT3G04630" "AT3G05330" "AT3G05380" "AT3G05640" "AT3G05800"
## [442] "AT3G05810" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06420" "AT3G06490" "AT3G06500"
## [449] "AT3G06890" "AT3G07700" "AT3G07870" "AT3G08720" "AT3G08990" "AT3G09032" "AT3G09370"
## [456] "AT3G09830" "AT3G09910" "AT3G09940" "AT3G10815" "AT3G10985" "AT3G11210" "AT3G11330"
## [463] "AT3G11340" "AT3G11410" "AT3G11420" "AT3G11450" "AT3G11470" "AT3G11480" "AT3G11580"
## [470] "AT3G11840" "AT3G12320" "AT3G12830" "AT3G12920" "AT3G13080" "AT3G13730" "AT3G13910"
## [477] "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14560" "AT3G14840" "AT3G14870" "AT3G15210"
## [484] "AT3G15500" "AT3G15534" "AT3G15760" "AT3G16330" "AT3G16400" "AT3G16450" "AT3G16460"
## [491] "AT3G16500" "AT3G16620" "AT3G16990" "AT3G17000" "AT3G17120" "AT3G17510" "AT3G17690"
## [498] "AT3G17800" "AT3G17810" "AT3G17860" "AT3G17910" "AT3G18295" "AT3G19270" "AT3G19580"
## [505] "AT3G19970" "AT3G21660" "AT3G21670" "AT3G21700" "AT3G21890" "AT3G22160" "AT3G22275"
## [512] "AT3G22290" "AT3G22370" "AT3G22415" "AT3G22560" "AT3G22910" "AT3G24518" "AT3G24520"
## [519] "AT3G25250" "AT3G25570" "AT3G25572" "AT3G25760" "AT3G25770" "AT3G25780" "AT3G25890"
## [526] "AT3G25910" "AT3G26690" "AT3G26830" "AT3G26840" "AT3G27170" "AT3G27210" "AT3G27415"
## [533] "AT3G27416" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G27960" "AT3G28007" "AT3G28580"
## [540] "AT3G28600" "AT3G29250" "AT3G29575" "AT3G30380" "AT3G43250" "AT3G43270" "AT3G43440"
## [547] "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860" "AT3G44870" "AT3G45040" "AT3G45130"
## [554] "AT3G46080" "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46668" "AT3G46670" "AT3G47420"
## [561] "AT3G47500" "AT3G47540" "AT3G47730" "AT3G47750" "AT3G47960" "AT3G48240" "AT3G48350"
## [568] "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520" "AT3G48660" "AT3G48870" "AT3G49400"
## [575] "AT3G49870" "AT3G50260" "AT3G50310" "AT3G50410" "AT3G50620" "AT3G50650" "AT3G50760"
## [582] "AT3G50910" "AT3G51090" "AT3G51450" "AT3G52100" "AT3G52310" "AT3G52740" "AT3G52770"
## [589] "AT3G52870" "AT3G53232" "AT3G54320" "AT3G54820" "AT3G54950" "AT3G55060" "AT3G55290"
## [596] "AT3G55500" "AT3G55640" "AT3G55880" "AT3G55970" "AT3G56260" "AT3G56400" "AT3G56891"
## [603] "AT3G57010" "AT3G57020" "AT3G57157" "AT3G57450" "AT3G57480" "AT3G57520" "AT3G57540"
## [610] "AT3G57760" "AT3G57880" "AT3G58795" "AT3G59050" "AT3G59052" "AT3G59710" "AT3G59800"
## [617] "AT3G59900" "AT3G60160" "AT3G60180" "AT3G60420" "AT3G60450" "AT3G60490" "AT3G60966"
## [624] "AT3G61190" "AT3G61420" "AT3G61430" "AT3G61630" "AT3G61890" "AT3G61900" "AT3G61920"
## [631] "AT3G63010" "AT3G63060" "AT4G00430" "AT4G01026" "AT4G01030" "AT4G01540" "AT4G01850"
## [638] "AT4G01895" "AT4G02220" "AT4G02360" "AT4G02380" "AT4G03320" "AT4G04223" "AT4G05010"
## [645] "AT4G05020" "AT4G05100" "AT4G06534" "AT4G06744" "AT4G07950" "AT4G08170" "AT4G08555"
## [652] "AT4G08870" "AT4G09460" "AT4G10290" "AT4G10390" "AT4G11140" "AT4G12000" "AT4G12005"
## [659] "AT4G12040" "AT4G12410" "AT4G12710" "AT4G12720" "AT4G12735" "AT4G13110" "AT4G13860"
## [666] "AT4G15100" "AT4G15200" "AT4G15248" "AT4G15280" "AT4G15770" "AT4G15940" "AT4G16730"
## [673] "AT4G16740" "AT4G16760" "AT4G18160" "AT4G18170" "AT4G18360" "AT4G18950" "AT4G20830"
## [680] "AT4G21060" "AT4G21200" "AT4G21215" "AT4G21440" "AT4G21570" "AT4G21680" "AT4G21780"
## [687] "AT4G21790" "AT4G21830" "AT4G21850" "AT4G22070" "AT4G22590" "AT4G22592" "AT4G22620"
## [694] "AT4G23050" "AT4G23060" "AT4G23450" "AT4G24040" "AT4G24110" "AT4G24340" "AT4G24380"
## [701] "AT4G24960" "AT4G25390" "AT4G25433" "AT4G25480" "AT4G25670" "AT4G25672" "AT4G25690"
## [708] "AT4G25692" "AT4G26060" "AT4G26080" "AT4G26470" "AT4G27350" "AT4G27410" "AT4G27830"
## [715] "AT4G27860" "AT4G28088" "AT4G28140" "AT4G28290" "AT4G28300" "AT4G29740" "AT4G29930"
## [722] "AT4G29950" "AT4G30180" "AT4G30470" "AT4G30530" "AT4G31330" "AT4G31780" "AT4G31800"
## [729] "AT4G31870" "AT4G32400" "AT4G33050" "AT4G33467" "AT4G33666" "AT4G34200" "AT4G34588"
## [736] "AT4G34590" "AT4G34650" "AT4G34710" "AT4G34860" "AT4G35110" "AT4G35160" "AT4G35180"
## [743] "AT4G35480" "AT4G35550" "AT4G35560" "AT4G35600" "AT4G35630" "AT4G35720" "AT4G36010"
## [750] "AT4G36110" "AT4G36380" "AT4G36500" "AT4G36700" "AT4G36780" "AT4G36820" "AT4G36900"
## [757] "AT4G36950" "AT4G36988" "AT4G36990" "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410"
## [764] "AT4G37760" "AT4G37850" "AT4G37990" "AT4G38000" "AT4G38410" "AT4G38810" "AT4G38940"
## [771] "AT4G39360" "AT4G39404" "AT4G39670" "AT4G39780" "AT4G39980" "AT5G01100" "AT5G01200"
## [778] "AT5G01210" "AT5G01215" "AT5G01500" "AT5G01840" "AT5G01850" "AT5G01900" "AT5G02020"
## [785] "AT5G02170" "AT5G02260" "AT5G02320" "AT5G02460" "AT5G03030" "AT5G03210" "AT5G03350"
## [792] "AT5G04250" "AT5G04340" "AT5G04720" "AT5G04760" "AT5G04770" "AT5G04860" "AT5G05140"
## [799] "AT5G05460" "AT5G06250" "AT5G06750" "AT5G06760" "AT5G06980" "AT5G06990" "AT5G07010"
## [806] "AT5G07070" "AT5G07440" "AT5G08130" "AT5G08640" "AT5G08790" "AT5G09430" "AT5G09440"
## [813] "AT5G09500" "AT5G09980" "AT5G10300" "AT5G10625" "AT5G10720" "AT5G11160" "AT5G11650"
## [820] "AT5G11860" "AT5G11870" "AT5G12340" "AT5G13220" "AT5G13320" "AT5G13330" "AT5G13760"
## [827] "AT5G13800" "AT5G13820" "AT5G14700" "AT5G14760" "AT5G15190" "AT5G15240" "AT5G15960"
## [834] "AT5G16170" "AT5G16450" "AT5G16830" "AT5G17450" "AT5G17490" "AT5G17760" "AT5G17780"
## [841] "AT5G17850" "AT5G17860" "AT5G19100" "AT5G19110" "AT5G19230" "AT5G19440" "AT5G19450"
## [848] "AT5G19930" "AT5G20180" "AT5G20190" "AT5G21280" "AT5G22060" "AT5G22390" "AT5G22540"
## [855] "AT5G22545" "AT5G22630" "AT5G23590" "AT5G23820" "AT5G24080" "AT5G24090" "AT5G24910"
## [862] "AT5G26340" "AT5G27150" "AT5G27520" "AT5G27610" "AT5G27930" "AT5G28237" "AT5G29000"
## [869] "AT5G38130" "AT5G38280" "AT5G38710" "AT5G38895" "AT5G39050" "AT5G39320" "AT5G39610"
## [876] "AT5G39660" "AT5G40210" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G41180" "AT5G41280"
## [883] "AT5G41315" "AT5G41590" "AT5G41600" "AT5G41610" "AT5G41612" "AT5G41730" "AT5G42900"
## [890] "AT5G43150" "AT5G43160" "AT5G43170" "AT5G44050" "AT5G44569" "AT5G44570" "AT5G45110"
## [897] "AT5G45130" "AT5G47130" "AT5G47240" "AT5G47730" "AT5G50360" "AT5G50760" "AT5G51060"
## [904] "AT5G51070" "AT5G51380" "AT5G51830" "AT5G52050" "AT5G52310" "AT5G52510" "AT5G52570"
## [911] "AT5G52660" "AT5G52882" "AT5G53120" "AT5G53200" "AT5G53290" "AT5G53710" "AT5G53760"
## [918] "AT5G54165" "AT5G54470" "AT5G54700" "AT5G54730" "AT5G54850" "AT5G54940" "AT5G55090"
## [925] "AT5G55180" "AT5G55400" "AT5G55530" "AT5G55700" "AT5G56750" "AT5G56760" "AT5G57050"
## [932] "AT5G57260" "AT5G57390" "AT5G57510" "AT5G57900" "AT5G58620" "AT5G58700" "AT5G59050"
## [939] "AT5G59220" "AT5G59340" "AT5G59480" "AT5G59490" "AT5G59580" "AT5G59760" "AT5G59780"
## [946] "AT5G59820" "AT5G60790" "AT5G60800" "AT5G60850" "AT5G60860" "AT5G60870" "AT5G60890"
## [953] "AT5G61390" "AT5G61810" "AT5G61820" "AT5G61960" "AT5G62020" "AT5G62070" "AT5G62150"
## [960] "AT5G62430" "AT5G62470" "AT5G63350" "AT5G63450" "AT5G63970" "AT5G64170" "AT5G64700"
## [967] "AT5G64710" "AT5G64750" "AT5G64810" "AT5G64880" "AT5G65140" "AT5G65280" "AT5G65380"
## [974] "AT5G65660" "AT5G65890" "AT5G66400" "AT5G66650" "AT5G66890" "AT5G66910" "AT5G67080"
## [981] "AT5G67160" "AT5G67180" "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67310" "AT5G67340"
## [988] "AT5G67350" "AT5G67480" "ATCG00140" "ATCG00730" "ATCG00920" "ATCG00950" "ATCG01090"
## [995] "ATCG01150" "ATMG00060"
##
## $Down$`A12-V12`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" "AT1G01610" "AT1G01620" "AT1G01720"
## [8] "AT1G01900" "AT1G02205" "AT1G02405" "AT1G02460" "AT1G07610" "AT1G08200" "AT1G09950"
## [15] "AT1G10370" "AT1G10530" "AT1G10560" "AT1G11720" "AT1G13920" "AT1G13930" "AT1G14120"
## [22] "AT1G16410" "AT1G16850" "AT1G17420" "AT1G17940" "AT1G19570" "AT1G19640" "AT1G19650"
## [29] "AT1G19670" "AT1G20030" "AT1G20070" "AT1G20450" "AT1G22550" "AT1G22770" "AT1G25422"
## [36] "AT1G25450" "AT1G25500" "AT1G26730" "AT1G26770" "AT1G26920" "AT1G27030" "AT1G27730"
## [43] "AT1G28010" "AT1G29330" "AT1G30240" "AT1G31710" "AT1G32860" "AT1G32910" "AT1G34210"
## [50] "AT1G49650" "AT1G50640" "AT1G51500" "AT1G51780" "AT1G52030" "AT1G52720" "AT1G54030"
## [57] "AT1G54040" "AT1G54095" "AT1G55260" "AT1G56580" "AT1G58270" "AT1G60190" "AT1G60270"
## [64] "AT1G61110" "AT1G61340" "AT1G64380" "AT1G64390" "AT1G64620" "AT1G64670" "AT1G65860"
## [71] "AT1G66280" "AT1G67420" "AT1G69140" "AT1G69530" "AT1G69600" "AT1G70300" "AT1G72140"
## [78] "AT1G73390" "AT1G73500" "AT1G74370" "AT1G75370" "AT1G75580" "AT1G76790" "AT1G77680"
## [85] "AT1G78070" "AT1G79570" "AT1G80120" "AT1G80820" "AT1G80840" "AT1G80850" "AT2G01830"
## [92] "AT2G03760" "AT2G04080" "AT2G06255" "AT2G18969" "AT2G18970" "AT2G20880" "AT2G22200"
## [99] "AT2G22330" "AT2G23130" "AT2G23340" "AT2G23760" "AT2G24210" "AT2G25130" "AT2G27510"
## [106] "AT2G27820" "AT2G29440" "AT2G29670" "AT2G30360" "AT2G30362" "AT2G30820" "AT2G30830"
## [113] "AT2G32235" "AT2G32240" "AT2G32510" "AT2G32990" "AT2G34070" "AT2G36380" "AT2G36590"
## [120] "AT2G36815" "AT2G36830" "AT2G36885" "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37620"
## [127] "AT2G38530" "AT2G38540" "AT2G38750" "AT2G39020" "AT2G39250" "AT2G41540" "AT2G41730"
## [134] "AT2G42530" "AT2G42540" "AT2G43535" "AT2G43550" "AT2G44578" "AT2G44640" "AT2G44840"
## [141] "AT2G45960" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260" "AT2G47485" "AT2G47840"
## [148] "AT2G47950" "AT3G02510" "AT3G03190" "AT3G03980" "AT3G04000" "AT3G04010" "AT3G04630"
## [155] "AT3G05640" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G07320" "AT3G08670" "AT3G09032"
## [162] "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480" "AT3G12145" "AT3G12920" "AT3G14870"
## [169] "AT3G15210" "AT3G15800" "AT3G16450" "AT3G16460" "AT3G16500" "AT3G17510" "AT3G17860"
## [176] "AT3G19720" "AT3G21670" "AT3G22560" "AT3G24518" "AT3G24520" "AT3G25760" "AT3G25770"
## [183] "AT3G25780" "AT3G27170" "AT3G27180" "AT3G27960" "AT3G43250" "AT3G43270" "AT3G46658"
## [190] "AT3G46660" "AT3G47750" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G49870" "AT3G50410"
## [197] "AT3G50620" "AT3G52290" "AT3G53420" "AT3G54820" "AT3G54830" "AT3G54920" "AT3G54950"
## [204] "AT3G55290" "AT3G56260" "AT3G57760" "AT3G59050" "AT3G59052" "AT3G59710" "AT3G59970"
## [211] "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61630" "AT3G61920" "AT3G62700" "AT3G63200"
## [218] "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030" "AT4G02360" "AT4G05010" "AT4G05100"
## [225] "AT4G06534" "AT4G06744" "AT4G08170" "AT4G08870" "AT4G10290" "AT4G10390" "AT4G12000"
## [232] "AT4G12030" "AT4G13860" "AT4G14040" "AT4G14440" "AT4G15210" "AT4G15770" "AT4G16740"
## [239] "AT4G17340" "AT4G18440" "AT4G21570" "AT4G22010" "AT4G22620" "AT4G23060" "AT4G23420"
## [246] "AT4G23500" "AT4G23600" "AT4G24510" "AT4G25433" "AT4G26700" "AT4G27350" "AT4G27520"
## [253] "AT4G28140" "AT4G29740" "AT4G30180" "AT4G31780" "AT4G31870" "AT4G33220" "AT4G33467"
## [260] "AT4G34650" "AT4G35320" "AT4G35550" "AT4G35560" "AT4G35720" "AT4G36010" "AT4G36780"
## [267] "AT4G36900" "AT4G37760" "AT4G37990" "AT4G38160" "AT4G38810" "AT4G39330" "AT4G39350"
## [274] "AT4G39980" "AT5G01210" "AT5G01215" "AT5G01840" "AT5G03030" "AT5G04770" "AT5G06980"
## [281] "AT5G07690" "AT5G08640" "AT5G09430" "AT5G09440" "AT5G09500" "AT5G13220" "AT5G14200"
## [288] "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15190" "AT5G15240" "AT5G15960" "AT5G16290"
## [295] "AT5G17490" "AT5G19100" "AT5G19110" "AT5G20270" "AT5G21280" "AT5G22740" "AT5G23820"
## [302] "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780"
## [309] "AT5G26260" "AT5G27150" "AT5G27930" "AT5G39320" "AT5G40380" "AT5G40390" "AT5G40460"
## [316] "AT5G40540" "AT5G41120" "AT5G41315" "AT5G41600" "AT5G42900" "AT5G44050" "AT5G47240"
## [323] "AT5G52050" "AT5G52310" "AT5G52882" "AT5G53200" "AT5G53760" "AT5G55090" "AT5G55180"
## [330] "AT5G56760" "AT5G56880" "AT5G57100" "AT5G57260" "AT5G57800" "AT5G59030" "AT5G59050"
## [337] "AT5G59340" "AT5G59480" "AT5G60850" "AT5G60860" "AT5G60890" "AT5G61810" "AT5G61890"
## [344] "AT5G62360" "AT5G62470" "AT5G62700" "AT5G63450" "AT5G64170" "AT5G64260" "AT5G64280"
## [351] "AT5G64700" "AT5G64750" "AT5G65660" "AT5G66052" "AT5G66053" "AT5G67070" "AT5G67180"
## [358] "AT5G67190" "AT5G67210" "AT5G67480"
##
##
## $Summary
## Comparisons Counts_Up_or_Down Counts_Up Counts_Down
## M1-A1 M1-A1 13 2 11
## M1-V1 M1-V1 521 292 229
## A1-V1 A1-V1 15 3 12
## M6-A6 M6-A6 1622 650 972
## M6-V6 M6-V6 618 364 254
## A6-V6 A6-V6 101 78 23
## M12-A12 M12-A12 2226 943 1283
## M12-V12 M12-V12 1352 356 996
## A12-V12 A12-V12 499 139 360DEG_list$Summary## Comparisons Counts_Up_or_Down Counts_Up Counts_Down
## M1-A1 M1-A1 13 2 11
## M1-V1 M1-V1 521 292 229
## A1-V1 A1-V1 15 3 12
## M6-A6 M6-A6 1622 650 972
## M6-V6 M6-V6 618 364 254
## A6-V6 A6-V6 101 78 23
## M12-A12 M12-A12 2226 943 1283
## M12-V12 M12-V12 1352 356 996
## A12-V12 A12-V12 499 139 360dev.off()## png
## 2write.table(DEG_list$Summary, "./results/DEGcounts.xls", quote=FALSE, sep="\t", row.names=FALSE)
Figure 3: Up and down regulated DEGs with FDR of 1%
6.3 Venn diagrams of DEG sets
The overLapper function can compute Venn intersects for large numbers of sample sets (up to 20 or more) and plots 2-5 way Venn diagrams. A useful feature is the possiblity to combine the counts from several Venn comparisons with the same number of sample sets in a single Venn diagram (here for 4 up and down DEG sets).
vennsetup <- overLapper(DEG_list$Up[6:9], type="vennsets")
vennsetup## An instance of 'VENNset' with 4 label setsvennsetdown <- overLapper(DEG_list$Down[6:9], type="vennsets")
vennsetdown## An instance of 'VENNset' with 4 label setspdf("results/vennplot.pdf")
vennPlot(list(vennsetup, vennsetdown), mymain="", mysub="", colmode=2, ccol=c("blue", "red"))
dev.off()## png
## 2
Figure 4: Venn Diagram for 4 Up and Down DEG Sets
7 (7)GO term enrichment analysis
library(GO.db)
library(AnnotationDbi)
source("../../systemPipeR/R/AllClasses.R")## Creating a new generic function for 'results' in the global environmentsource("../../systemPipeR/R/fastqQuality.R")
source("../../systemPipeR/R/overLapper.R")
source("../../systemPipeR/R/utilities.R")
source("../../systemPipeR/R/geneSetAnalysis.R")
.readGOorg <- function(myfile, colno, org) {
# browser()
go_org <- read.delim(myfile, na.strings = "", header=FALSE, comment.char = "!", sep="\t")
go_org <- go_org[ , colno]
names(go_org) <- c("GOID", "GeneID", "GOCAT")
if(org == "Arabidopsis") {
go_org[,"GeneID"] <- gsub(".*(AT.G\\d\\d\\d\\d\\d).*", "\\1", as.character(go_org[,2]), perl=TRUE)
go_org <- go_org[grep("^AT.G\\d\\d\\d\\d\\d", as.character(go_org$GeneID), perl=TRUE),]
go_org <- go_org[!duplicated(paste(go_org[,"GOID"], gsub("\\.\\d{1,}", "", as.character(go_org[,"GeneID"]), perl=TRUE), sep="_")),]
}
go_org <- na.omit(go_org)
## Make GO cat labels consistent, e.g. from BioMart
gocat <- as.character(go_org$GOCAT)
gocat[gocat=="molecular_function"] <- "F"
gocat[gocat=="biological_process"] <- "P"
gocat[gocat=="cellular_component"] <- "C"
go_org[,"GOCAT"] <- gocat
## Split data frame by category
GO_MF_DF <- go_org[go_org[,3]=="F",]
GO_BP_DF <- go_org[go_org[,3]=="P",]
GO_CC_DF <- go_org[go_org[,3]=="C",]
## Generates data frame (go_df) containing the commonly used components for all GO nodes: GOID, GO Term and Ontology Type. This step is only required if "go_df" hasn't been imported with the above load() function.
go_df <- data.frame(GOID=names(Term(GOTERM)), Term=Term(GOTERM), Ont=Ontology(GOTERM))
go_df <- na.omit(go_df)
## Return results
dflist <- list(D_BP=GO_BP_DF, D_CC=GO_CC_DF, D_MF=GO_MF_DF, GO_DF=go_df)
return(dflist)
}
.gene2GOlist <- function(catdf, rootUK=FALSE) { # If the argument 'rootUK' is set to TRUE then the root nodes are treated as terminal nodes to account for the new unknown terms
# browser()
## Import required data frames
GO_MF_DF <- catdf$D_MF
GO_BP_DF <- catdf$D_BP
GO_CC_DF <- catdf$D_CC
## Populate each GO node with associated gene ids
for(i in c("MF","BP","CC")) {
if(i=="MF") {
go_offspr_list <- as.list(GOMFOFFSPRING) }
if(i=="BP") {
go_offspr_list <- as.list(GOBPOFFSPRING) }
if(i=="CC") {
go_offspr_list <- as.list(GOCCOFFSPRING) }
go_offspr_list <- lapply(go_offspr_list, unlist); go_offspr_list <- lapply(go_offspr_list, as.vector) # clean-up step for the list
go_offspr_list_temp <- lapply(names(go_offspr_list), function(x) c(x, go_offspr_list[[x]]) ) # include list component (GOID) names in corresponding (GOID) vectors
names(go_offspr_list_temp) <- names(go_offspr_list) # names list components after go_offspr_list
go_offspr_list <- go_offspr_list_temp
go_offspr_list <- lapply(go_offspr_list, function(x) x[!is.na(x)]) # remove NAs in vectors
## Treat root nodes as terminal nodes to account for the new unknown terms. This step removes the offspring information from the root nodes.
if(rootUK==TRUE) {
if(i=="MF") { go_offspr_list[["GO:0003674"]] <- c("GO:0003674") }
if(i=="BP") { go_offspr_list[["GO:0008150"]] <- c("GO:0008150") }
if(i=="CC") { go_offspr_list[["GO:0005575"]] <- c("GO:0005575") }
}
## Retrieve gene (affy) IDs for GOID vectors
if(i=="MF") {
MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in% x, 2])))
}
if(i=="BP") {
BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in% x, 2])))
}
if(i=="CC") {
CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in% x, 2])))
}
cat("\n", paste("'", i, "_node_gene_list'", sep=""), "with gene-to-GO-OFFSPRING associations created.", "\n")
}
node_gene_list <-list(L_BP=BP_node_gene_list, L_CC=CC_node_gene_list, L_MF=MF_node_gene_list)
return(node_gene_list)
}
makeCATdb <- function(myfile, lib=NULL, org="", colno = c(1,2,3), idconv=NULL, rootUK=FALSE) {
if(!is.null(lib) & !is.null(myfile)) stop("Arguments myfile and lib are exclusive. One of them needs to be assigned NULL.")
if(!is.null(lib)) {
catdf <- .sampleDFgene2GO(lib=lib)
}
if(!is.null(myfile)) {
catdf <- .readGOorg(myfile=myfile, org=org, colno=colno)
}
catlist <- .gene2GOlist(catdf=catdf, rootUK=rootUK)
catdblist <- c(catmap=list(catdf), catlist=list(catlist), idconv=list(idconv))
catdb <- as(catdblist, "catDB")
cat("\n", "makeCATdb successful.", "\n")
return(catdb)
}
cat("Done\n") ## Done7.1 Obtain gene-to-GO mappings
The following shows how to obtain gene-to-GO mappings from biomaRt (here for A. thaliana) and how to organize them for the downstream GO term enrichment analysis. Alternatively, the gene-to-GO mappings can be obtained for many organisms from Bioconductors .db genome annotation packages or GO annotation files provided by various genome databases. For each annotation this relatively slow preprocessing step needs to be performed only once. Subsequently, the preprocessed data can be loaded with the load function as shown in the next subsection.
# useMart() fails if mart is down for maintenance
library("biomaRt")
listMarts(host="plants.ensembl.org")## biomart version
## 1 plants_mart Ensembl Plants Genes 42
## 2 plants_variations Ensembl Plants Variations 42m <- useMart("plants_mart", host="plants.ensembl.org")
listDatasets(m)## dataset description
## 1 ahalleri_eg_gene Arabidopsis halleri genes (Ahal2.2)
## 2 alyrata_eg_gene Arabidopsis lyrata genes (v.1.0)
## 3 atauschii_eg_gene Aegilops tauschii genes (Aet v4.0)
## 4 athaliana_eg_gene Arabidopsis thaliana genes (TAIR10)
## 5 atrichopoda_eg_gene Amborella trichopoda genes (AMTR1.0)
## 6 bdistachyon_eg_gene Brachypodium distachyon genes (Brachypodium_distachyon_v3.0)
## 7 bnapus_eg_gene Brassica napus genes (AST_PRJEB5043_v1)
## 8 boleracea_eg_gene Brassica oleracea genes (BOL)
## 9 brapa_eg_gene Brassica rapa genes (Brapa_1.0)
## 10 bvulgaris_eg_gene Beta vulgaris genes (RefBeet-1.2.2)
## 11 ccapsularis_eg_gene Corchorus capsularis genes (CCACVL1_1.0)
## 12 ccrispus_eg_gene Chondrus crispus genes (ASM35022v2)
## 13 cmerolae_eg_gene Cyanidioschyzon merolae genes (ASM9120v1)
## 14 creinhardtii_eg_gene Chlamydomonas reinhardtii genes (Chlamydomonas_reinhardtii_v5.5)
## 15 csativus_eg_gene Cucumis sativus genes (ASM407v2)
## 16 dcarota_eg_gene Daucus carota genes (ASM162521v1)
## 17 drotundata_eg_gene Dioscorea rotundata genes (TDr96_F1_Pseudo_Chromosome_v1.0)
## 18 gmax_eg_gene Glycine max genes (Glycine_max_v2.1)
## 19 graimondii_eg_gene Gossypium raimondii genes (Graimondii2_0)
## 20 gsulphuraria_eg_gene Galdieria sulphuraria genes (ASM34128v1)
## 21 hannuus_eg_gene Helianthus annuus genes (HanXRQr1.0)
## 22 hvulgare_eg_gene Hordeum vulgare genes (IBSC v2)
## 23 langustifolius_eg_gene Lupinus angustifolius genes (LupAngTanjil_v1.0)
## 24 lperrieri_eg_gene Leersia perrieri genes (Lperr_V1.4)
## 25 macuminata_eg_gene Musa acuminata genes (ASM31385v1)
## 26 mesculenta_eg_gene Manihot esculenta genes (Manihot esculenta v6)
## 27 mtruncatula_eg_gene Medicago truncatula genes (MedtrA17_4.0)
## 28 nattenuata_eg_gene Nicotiana attenuata genes (NIATTr2)
## 29 obarthii_eg_gene Oryza barthii genes (O.barthii_v1)
## 30 obrachyantha_eg_gene Oryza brachyantha genes (Oryza_brachyantha.v1.4b)
## 31 oglaberrima_eg_gene Oryza glaberrima genes (Oryza_glaberrima_V1)
## 32 oglumipatula_eg_gene Oryza glumipatula genes (Oryza_glumaepatula_v1.5)
## 33 oindica_eg_gene Oryza sativa Indica Group genes (ASM465v1)
## 34 olongistaminata_eg_gene Oryza longistaminata genes (O_longistaminata_v1.0)
## 35 olucimarinus_eg_gene Ostreococcus lucimarinus genes (ASM9206v1)
## 36 omeridionalis_eg_gene Oryza meridionalis genes (Oryza_meridionalis_v1.3)
## 37 onivara_eg_gene Oryza nivara genes (Oryza_nivara_v1.0)
## 38 opunctata_eg_gene Oryza punctata genes (Oryza_punctata_v1.2)
## 39 orufipogon_eg_gene Oryza rufipogon genes (OR_W1943)
## 40 osativa_eg_gene Oryza sativa Japonica Group genes (IRGSP-1.0)
## 41 ppatens_eg_gene Physcomitrella patens genes (Phypa V3)
## 42 ppersica_eg_gene Prunus persica genes (Prunus_persica_NCBIv2)
## 43 ptrichocarpa_eg_gene Populus trichocarpa genes (Pop_tri_v3)
## 44 pvulgaris_eg_gene Phaseolus vulgaris genes (PhaVulg1_0)
## 45 sbicolor_eg_gene Sorghum bicolor genes (Sorghum_bicolor_NCBIv3)
## 46 sitalica_eg_gene Setaria italica genes (Setaria_italica_v2.0)
## 47 slycopersicum_eg_gene Solanum lycopersicum genes (SL3.0)
## 48 smoellendorffii_eg_gene Selaginella moellendorffii genes (v1.0)
## 49 stuberosum_eg_gene Solanum tuberosum genes (SolTub_3.0)
## 50 taestivum_eg_gene Triticum aestivum genes (IWGSC)
## 51 tcacao_eg_gene Theobroma cacao genes (Theobroma_cacao_20110822)
## 52 tdicoccoides_eg_gene Triticum dicoccoides genes (WEWSeq v.1.0)
## 53 tpratense_eg_gene Trifolium pratense genes (Trpr)
## 54 turartu_eg_gene Triticum urartu genes (ASM34745v1)
## 55 vangularis_eg_gene Vigna angularis genes (Vigan1.1)
## 56 vradiata_eg_gene Vigna radiata genes (Vradiata_ver6)
## 57 vvinifera_eg_gene Vitis vinifera genes (12X)
## 58 zmays_eg_gene Zea mays genes (B73 RefGen_v4)
## version
## 1 Ahal2.2
## 2 v.1.0
## 3 Aet v4.0
## 4 TAIR10
## 5 AMTR1.0
## 6 Brachypodium_distachyon_v3.0
## 7 AST_PRJEB5043_v1
## 8 BOL
## 9 Brapa_1.0
## 10 RefBeet-1.2.2
## 11 CCACVL1_1.0
## 12 ASM35022v2
## 13 ASM9120v1
## 14 Chlamydomonas_reinhardtii_v5.5
## 15 ASM407v2
## 16 ASM162521v1
## 17 TDr96_F1_Pseudo_Chromosome_v1.0
## 18 Glycine_max_v2.1
## 19 Graimondii2_0
## 20 ASM34128v1
## 21 HanXRQr1.0
## 22 IBSC v2
## 23 LupAngTanjil_v1.0
## 24 Lperr_V1.4
## 25 ASM31385v1
## 26 Manihot esculenta v6
## 27 MedtrA17_4.0
## 28 NIATTr2
## 29 O.barthii_v1
## 30 Oryza_brachyantha.v1.4b
## 31 Oryza_glaberrima_V1
## 32 Oryza_glumaepatula_v1.5
## 33 ASM465v1
## 34 O_longistaminata_v1.0
## 35 ASM9206v1
## 36 Oryza_meridionalis_v1.3
## 37 Oryza_nivara_v1.0
## 38 Oryza_punctata_v1.2
## 39 OR_W1943
## 40 IRGSP-1.0
## 41 Phypa V3
## 42 Prunus_persica_NCBIv2
## 43 Pop_tri_v3
## 44 PhaVulg1_0
## 45 Sorghum_bicolor_NCBIv3
## 46 Setaria_italica_v2.0
## 47 SL3.0
## 48 v1.0
## 49 SolTub_3.0
## 50 IWGSC
## 51 Theobroma_cacao_20110822
## 52 WEWSeq v.1.0
## 53 Trpr
## 54 ASM34745v1
## 55 Vigan1.1
## 56 Vradiata_ver6
## 57 12X
## 58 B73 RefGen_v4listDatasets(m)[45,] # athaliana_eg_gene## dataset description version
## 45 sbicolor_eg_gene Sorghum bicolor genes (Sorghum_bicolor_NCBIv3) Sorghum_bicolor_NCBIv3m <- useMart("plants_mart", dataset="athaliana_eg_gene", host="plants.ensembl.org")
listAttributes(m) # Choose data types you want to download## name
## 1 ensembl_gene_id
## 2 ensembl_transcript_id
## 3 ensembl_peptide_id
## 4 ensembl_exon_id
## 5 description
## 6 chromosome_name
## 7 start_position
## 8 end_position
## 9 strand
## 10 band
## 11 transcript_start
## 12 transcript_end
## 13 transcription_start_site
## 14 transcript_length
## 15 external_gene_name
## 16 external_gene_source
## 17 transcript_count
## 18 percentage_gene_gc_content
## 19 gene_biotype
## 20 transcript_biotype
## 21 source
## 22 transcript_source
## 23 go_id
## 24 name_1006
## 25 definition_1006
## 26 go_linkage_type
## 27 namespace_1003
## 28 po_id
## 29 po_name_1006
## 30 po_definition_1006
## 31 po_linkage_type
## 32 po_namespace_1003
## 33 goslim_goa_accession
## 34 goslim_goa_description
## 35 chembl
## 36 embl
## 37 arrayexpress
## 38 protein_id
## 39 kegg_enzyme
## 40 merops
## 41 mirbase_accession
## 42 mirbase_id
## 43 mirbase_trans_name
## 44 nasc_gene_id
## 45 entrezgene
## 46 pdb
## 47 plant_reactome_pathway
## 48 plant_reactome_reaction
## 49 po
## 50 refseq_dna
## 51 refseq_peptide
## 52 string
## 53 tair_locus
## 54 tair_symbol
## 55 tair_locus_model
## 56 tair_translation
## 57 unigene
## 58 uniparc
## 59 uniprotvarsplic
## 60 uniprotswissprot
## 61 uniprotsptrembl
## 62 affy_aragene
## 63 affy_ath1_121501
## 64 agilent_g2519f_015059
## 65 agilent_g2519f_021169
## 66 agilent_g4136a_011839
## 67 agilent_g4136b_013324
## 68 agilent_g4142a_012600
## 69 catma_catma_v5
## 70 cdd
## 71 cdd_start
## 72 cdd_end
## 73 gene3d
## 74 gene3d_start
## 75 gene3d_end
## 76 hamap
## 77 hamap_start
## 78 hamap_end
## 79 hmmpanther
## 80 hmmpanther_start
## 81 hmmpanther_end
## 82 pfam
## 83 pfam_start
## 84 pfam_end
## 85 pirsf
## 86 pirsf_start
## 87 pirsf_end
## 88 prints
## 89 prints_start
## 90 prints_end
## 91 blastprodom
## 92 blastprodom_start
## 93 blastprodom_end
## 94 scanprosite
## 95 scanprosite_start
## 96 scanprosite_end
## 97 pfscan
## 98 pfscan_start
## 99 pfscan_end
## 100 sfld
## 101 sfld_start
## 102 sfld_end
## 103 smart
## 104 smart_start
## 105 smart_end
## 106 superfamily
## 107 superfamily_start
## 108 superfamily_end
## 109 tigrfam
## 110 tigrfam_start
## 111 tigrfam_end
## 112 interpro
## 113 interpro_short_description
## 114 interpro_description
## 115 interpro_start
## 116 interpro_end
## 117 mobidblite
## 118 mobidblite_start
## 119 mobidblite_end
## 120 ncoils
## 121 ncoils_start
## 122 ncoils_end
## 123 seg
## 124 seg_start
## 125 seg_end
## 126 signalp
## 127 signalp_start
## 128 signalp_end
## 129 tmhmm
## 130 tmhmm_start
## 131 tmhmm_end
## 132 ensembl_gene_id
## 133 ensembl_transcript_id
## 134 ensembl_peptide_id
## 135 chromosome_name
## 136 start_position
## 137 end_position
## 138 transcript_start
## 139 transcript_end
## 140 transcription_start_site
## 141 transcript_length
## 142 strand
## 143 external_gene_name
## 144 external_gene_source
## 145 5_utr_start
## 146 5_utr_end
## 147 3_utr_start
## 148 3_utr_end
## 149 cds_length
## 150 transcript_count
## 151 description
## 152 gene_biotype
## 153 exon_chrom_start
## 154 exon_chrom_end
## 155 is_constitutive
## 156 rank
## 157 phase
## 158 end_phase
## 159 cdna_coding_start
## 160 cdna_coding_end
## 161 genomic_coding_start
## 162 genomic_coding_end
## 163 ensembl_exon_id
## 164 cds_start
## 165 cds_end
## 166 ensembl_gene_id
## 167 ensembl_transcript_id
## 168 ensembl_peptide_id
## 169 chromosome_name
## 170 start_position
## 171 end_position
## 172 strand
## 173 band
## 174 external_gene_name
## 175 external_gene_source
## 176 transcript_count
## 177 percentage_gene_gc_content
## 178 description
## 179 atauschii_eg_homolog_ensembl_gene
## 180 atauschii_eg_homolog_associated_gene_name
## 181 atauschii_eg_homolog_ensembl_peptide
## 182 atauschii_eg_homolog_chromosome
## 183 atauschii_eg_homolog_chrom_start
## 184 atauschii_eg_homolog_chrom_end
## 185 atauschii_eg_homolog_canonical_transcript_protein
## 186 atauschii_eg_homolog_subtype
## 187 atauschii_eg_homolog_orthology_type
## 188 atauschii_eg_homolog_perc_id
## 189 atauschii_eg_homolog_perc_id_r1
## 190 atauschii_eg_homolog_goc_score
## 191 atauschii_eg_homolog_wga_coverage
## 192 atauschii_eg_homolog_dn
## 193 atauschii_eg_homolog_ds
## 194 atauschii_eg_homolog_orthology_confidence
## 195 atrichopoda_eg_homolog_ensembl_gene
## 196 atrichopoda_eg_homolog_associated_gene_name
## 197 atrichopoda_eg_homolog_ensembl_peptide
## 198 atrichopoda_eg_homolog_chromosome
## 199 atrichopoda_eg_homolog_chrom_start
## 200 atrichopoda_eg_homolog_chrom_end
## 201 atrichopoda_eg_homolog_canonical_transcript_protein
## 202 atrichopoda_eg_homolog_subtype
## 203 atrichopoda_eg_homolog_orthology_type
## 204 atrichopoda_eg_homolog_perc_id
## 205 atrichopoda_eg_homolog_perc_id_r1
## 206 atrichopoda_eg_homolog_goc_score
## 207 atrichopoda_eg_homolog_wga_coverage
## 208 atrichopoda_eg_homolog_dn
## 209 atrichopoda_eg_homolog_ds
## 210 atrichopoda_eg_homolog_orthology_confidence
## 211 ahalleri_eg_homolog_ensembl_gene
## 212 ahalleri_eg_homolog_associated_gene_name
## 213 ahalleri_eg_homolog_ensembl_peptide
## 214 ahalleri_eg_homolog_chromosome
## 215 ahalleri_eg_homolog_chrom_start
## 216 ahalleri_eg_homolog_chrom_end
## 217 ahalleri_eg_homolog_canonical_transcript_protein
## 218 ahalleri_eg_homolog_subtype
## 219 ahalleri_eg_homolog_orthology_type
## 220 ahalleri_eg_homolog_perc_id
## 221 ahalleri_eg_homolog_perc_id_r1
## 222 ahalleri_eg_homolog_goc_score
## 223 ahalleri_eg_homolog_wga_coverage
## 224 ahalleri_eg_homolog_dn
## 225 ahalleri_eg_homolog_ds
## 226 ahalleri_eg_homolog_orthology_confidence
## 227 alyrata_eg_homolog_ensembl_gene
## 228 alyrata_eg_homolog_associated_gene_name
## 229 alyrata_eg_homolog_ensembl_peptide
## 230 alyrata_eg_homolog_chromosome
## 231 alyrata_eg_homolog_chrom_start
## 232 alyrata_eg_homolog_chrom_end
## 233 alyrata_eg_homolog_canonical_transcript_protein
## 234 alyrata_eg_homolog_subtype
## 235 alyrata_eg_homolog_orthology_type
## 236 alyrata_eg_homolog_perc_id
## 237 alyrata_eg_homolog_perc_id_r1
## 238 alyrata_eg_homolog_goc_score
## 239 alyrata_eg_homolog_wga_coverage
## 240 alyrata_eg_homolog_dn
## 241 alyrata_eg_homolog_ds
## 242 alyrata_eg_homolog_orthology_confidence
## 243 bvulgaris_eg_homolog_ensembl_gene
## 244 bvulgaris_eg_homolog_associated_gene_name
## 245 bvulgaris_eg_homolog_ensembl_peptide
## 246 bvulgaris_eg_homolog_chromosome
## 247 bvulgaris_eg_homolog_chrom_start
## 248 bvulgaris_eg_homolog_chrom_end
## 249 bvulgaris_eg_homolog_canonical_transcript_protein
## 250 bvulgaris_eg_homolog_subtype
## 251 bvulgaris_eg_homolog_orthology_type
## 252 bvulgaris_eg_homolog_perc_id
## 253 bvulgaris_eg_homolog_perc_id_r1
## 254 bvulgaris_eg_homolog_goc_score
## 255 bvulgaris_eg_homolog_wga_coverage
## 256 bvulgaris_eg_homolog_dn
## 257 bvulgaris_eg_homolog_ds
## 258 bvulgaris_eg_homolog_orthology_confidence
## 259 bdistachyon_eg_homolog_ensembl_gene
## 260 bdistachyon_eg_homolog_associated_gene_name
## 261 bdistachyon_eg_homolog_ensembl_peptide
## 262 bdistachyon_eg_homolog_chromosome
## 263 bdistachyon_eg_homolog_chrom_start
## 264 bdistachyon_eg_homolog_chrom_end
## 265 bdistachyon_eg_homolog_canonical_transcript_protein
## 266 bdistachyon_eg_homolog_subtype
## 267 bdistachyon_eg_homolog_orthology_type
## 268 bdistachyon_eg_homolog_perc_id
## 269 bdistachyon_eg_homolog_perc_id_r1
## 270 bdistachyon_eg_homolog_goc_score
## 271 bdistachyon_eg_homolog_wga_coverage
## 272 bdistachyon_eg_homolog_dn
## 273 bdistachyon_eg_homolog_ds
## 274 bdistachyon_eg_homolog_orthology_confidence
## 275 bnapus_eg_homolog_ensembl_gene
## 276 bnapus_eg_homolog_associated_gene_name
## 277 bnapus_eg_homolog_ensembl_peptide
## 278 bnapus_eg_homolog_chromosome
## 279 bnapus_eg_homolog_chrom_start
## 280 bnapus_eg_homolog_chrom_end
## 281 bnapus_eg_homolog_canonical_transcript_protein
## 282 bnapus_eg_homolog_subtype
## 283 bnapus_eg_homolog_orthology_type
## 284 bnapus_eg_homolog_perc_id
## 285 bnapus_eg_homolog_perc_id_r1
## 286 bnapus_eg_homolog_goc_score
## 287 bnapus_eg_homolog_wga_coverage
## 288 bnapus_eg_homolog_dn
## 289 bnapus_eg_homolog_ds
## 290 bnapus_eg_homolog_orthology_confidence
## 291 boleracea_eg_homolog_ensembl_gene
## 292 boleracea_eg_homolog_associated_gene_name
## 293 boleracea_eg_homolog_ensembl_peptide
## 294 boleracea_eg_homolog_chromosome
## 295 boleracea_eg_homolog_chrom_start
## 296 boleracea_eg_homolog_chrom_end
## 297 boleracea_eg_homolog_canonical_transcript_protein
## 298 boleracea_eg_homolog_subtype
## 299 boleracea_eg_homolog_orthology_type
## 300 boleracea_eg_homolog_perc_id
## 301 boleracea_eg_homolog_perc_id_r1
## 302 boleracea_eg_homolog_goc_score
## 303 boleracea_eg_homolog_wga_coverage
## 304 boleracea_eg_homolog_dn
## 305 boleracea_eg_homolog_ds
## 306 boleracea_eg_homolog_orthology_confidence
## 307 brapa_eg_homolog_ensembl_gene
## 308 brapa_eg_homolog_associated_gene_name
## 309 brapa_eg_homolog_ensembl_peptide
## 310 brapa_eg_homolog_chromosome
## 311 brapa_eg_homolog_chrom_start
## 312 brapa_eg_homolog_chrom_end
## 313 brapa_eg_homolog_canonical_transcript_protein
## 314 brapa_eg_homolog_subtype
## 315 brapa_eg_homolog_orthology_type
## 316 brapa_eg_homolog_perc_id
## 317 brapa_eg_homolog_perc_id_r1
## 318 brapa_eg_homolog_goc_score
## 319 brapa_eg_homolog_wga_coverage
## 320 brapa_eg_homolog_dn
## 321 brapa_eg_homolog_ds
## 322 brapa_eg_homolog_orthology_confidence
## 323 creinhardtii_eg_homolog_ensembl_gene
## 324 creinhardtii_eg_homolog_associated_gene_name
## 325 creinhardtii_eg_homolog_ensembl_peptide
## 326 creinhardtii_eg_homolog_chromosome
## 327 creinhardtii_eg_homolog_chrom_start
## 328 creinhardtii_eg_homolog_chrom_end
## 329 creinhardtii_eg_homolog_canonical_transcript_protein
## 330 creinhardtii_eg_homolog_subtype
## 331 creinhardtii_eg_homolog_orthology_type
## 332 creinhardtii_eg_homolog_perc_id
## 333 creinhardtii_eg_homolog_perc_id_r1
## description page
## 1 Gene stable ID feature_page
## 2 Transcript stable ID feature_page
## 3 Protein stable ID feature_page
## 4 Exon stable ID feature_page
## 5 Gene description feature_page
## 6 Chromosome/scaffold name feature_page
## 7 Gene start (bp) feature_page
## 8 Gene end (bp) feature_page
## 9 Strand feature_page
## 10 Karyotype band feature_page
## 11 Transcript start (bp) feature_page
## 12 Transcript end (bp) feature_page
## 13 Transcription start site (TSS) feature_page
## 14 Transcript length (including UTRs and CDS) feature_page
## 15 Gene name feature_page
## 16 Source of gene name feature_page
## 17 Transcript count feature_page
## 18 Gene % GC content feature_page
## 19 Gene type feature_page
## 20 Transcript type feature_page
## 21 Source (gene) feature_page
## 22 Source (transcript) feature_page
## 23 GO term accession feature_page
## 24 GO term name feature_page
## 25 GO term definition feature_page
## 26 GO term evidence code feature_page
## 27 GO domain feature_page
## 28 PO term accession (bp) feature_page
## 29 PO term name (bp) feature_page
## 30 PO term definition (bp) feature_page
## 31 PO term evidence code (bp) feature_page
## 32 PO domain feature_page
## 33 GOSlim GOA Accession(s) feature_page
## 34 GOSlim GOA Description feature_page
## 35 ChEMBL ID feature_page
## 36 European Nucleotide Archive ID feature_page
## 37 Expression Atlas ID feature_page
## 38 INSDC protein ID feature_page
## 39 KEGG Pathway and Enzyme ID feature_page
## 40 MEROPS - the Peptidase Database ID feature_page
## 41 miRBase accession feature_page
## 42 miRBase ID feature_page
## 43 miRBase transcript name ID feature_page
## 44 NASC Gene ID feature_page
## 45 NCBI gene ID feature_page
## 46 PDB ID feature_page
## 47 Plant Reactome Pathway ID feature_page
## 48 Plant Reactome Reaction ID feature_page
## 49 Plant Structure Ontology ID feature_page
## 50 RefSeq DNA ID feature_page
## 51 RefSeq peptide ID feature_page
## 52 STRING ID feature_page
## 53 TAIR ID feature_page
## 54 TAIR Gene Name ID feature_page
## 55 TAIR Locus (Model) ID feature_page
## 56 TAIR Translation identifier ID feature_page
## 57 UniGene ID feature_page
## 58 UniParc ID feature_page
## 59 UniProtKB/SpliceVariant ID feature_page
## 60 UniProtKB/Swiss-Prot ID feature_page
## 61 UniProtKB/TrEMBL ID feature_page
## 62 AFFY AraGene probe feature_page
## 63 AFFY ATH1 121501 probe feature_page
## 64 AGILENT G2519F 015059 probe feature_page
## 65 AGILENT G2519F 021169 probe feature_page
## 66 AGILENT G4136A 011839 probe feature_page
## 67 AGILENT G4136B 013324 probe feature_page
## 68 AGILENT G4142A 012600 probe feature_page
## 69 CATMA CATMA v5 probe feature_page
## 70 CDD ID feature_page
## 71 CDD start feature_page
## 72 CDD end feature_page
## 73 Gene3D ID feature_page
## 74 Gene3D start feature_page
## 75 Gene3D end feature_page
## 76 HAMAP ID feature_page
## 77 HAMAP start feature_page
## 78 HAMAP end feature_page
## 79 PANTHER ID feature_page
## 80 PANTHER start feature_page
## 81 PANTHER end feature_page
## 82 Pfam ID feature_page
## 83 Pfam start feature_page
## 84 Pfam end feature_page
## 85 PIRSF ID feature_page
## 86 PIRSF start feature_page
## 87 PIRSF end feature_page
## 88 Prints ID feature_page
## 89 Prints start feature_page
## 90 Prints end feature_page
## 91 ProDom ID feature_page
## 92 ProDom start feature_page
## 93 ProDom end feature_page
## 94 PROSITE patterns ID feature_page
## 95 PROSITE patterns start feature_page
## 96 PROSITE patterns end feature_page
## 97 PROSITE profiles ID feature_page
## 98 PROSITE profiles start feature_page
## 99 PROSITE profiles end feature_page
## 100 SFLD ID feature_page
## 101 SFLD start feature_page
## 102 SFLD end feature_page
## 103 SMART ID feature_page
## 104 SMART start feature_page
## 105 SMART end feature_page
## 106 Superfamily ID feature_page
## 107 Superfamily start feature_page
## 108 Superfamily end feature_page
## 109 TIGRFAM ID feature_page
## 110 TIGRFAM start feature_page
## 111 TIGRFAM end feature_page
## 112 Interpro ID feature_page
## 113 Interpro Short Description feature_page
## 114 Interpro Description feature_page
## 115 Interpro start feature_page
## 116 Interpro end feature_page
## 117 MobiDB lite feature_page
## 118 MobiDB lite start feature_page
## 119 MobiDB lite end feature_page
## 120 Coiled-coils (Ncoils) feature_page
## 121 Coiled-coils (Ncoils) start feature_page
## 122 Coiled-coils (Ncoils) end feature_page
## 123 Low complexity (Seg) feature_page
## 124 Low complexity (Seg) start feature_page
## 125 Low complexity (Seg) end feature_page
## 126 Cleavage site (Signalp) feature_page
## 127 Cleavage site (Signalp) start feature_page
## 128 Cleavage site (Signalp) end feature_page
## 129 Transmembrane helices feature_page
## 130 Transmembrane helices start feature_page
## 131 Transmembrane helices end feature_page
## 132 Gene stable ID structure
## 133 Transcript stable ID structure
## 134 Protein stable ID structure
## 135 Chromosome/scaffold name structure
## 136 Gene start (bp) structure
## 137 Gene end (bp) structure
## 138 Transcript start (bp) structure
## 139 Transcript end (bp) structure
## 140 Transcription start site (TSS) structure
## 141 Transcript length (including UTRs and CDS) structure
## 142 Strand structure
## 143 Gene name structure
## 144 Source of gene name structure
## 145 5' UTR start structure
## 146 5' UTR end structure
## 147 3' UTR start structure
## 148 3' UTR end structure
## 149 CDS Length structure
## 150 Transcript count structure
## 151 Gene description structure
## 152 Gene type structure
## 153 Exon region start (bp) structure
## 154 Exon region end (bp) structure
## 155 Constitutive exon structure
## 156 Exon rank in transcript structure
## 157 Start phase structure
## 158 End phase structure
## 159 cDNA coding start structure
## 160 cDNA coding end structure
## 161 Genomic coding start structure
## 162 Genomic coding end structure
## 163 Exon stable ID structure
## 164 CDS start structure
## 165 CDS end structure
## 166 Gene stable ID homologs
## 167 Transcript stable ID homologs
## 168 Protein stable ID homologs
## 169 Chromosome/scaffold name homologs
## 170 Gene start (bp) homologs
## 171 Gene end (bp) homologs
## 172 Strand homologs
## 173 Karyotype band homologs
## 174 Gene name homologs
## 175 Source of gene name homologs
## 176 Transcript count homologs
## 177 Gene % GC content homologs
## 178 Gene description homologs
## 179 Aegilops tauschii gene stable ID homologs
## 180 Aegilops tauschii gene name homologs
## 181 Aegilops tauschii protein or transcript stable ID homologs
## 182 Aegilops tauschii chromosome/scaffold name homologs
## 183 Aegilops tauschii chromosome/scaffold start (bp) homologs
## 184 Aegilops tauschii chromosome/scaffold end (bp) homologs
## 185 Query protein or transcript ID homologs
## 186 Last common ancestor with Aegilops tauschii homologs
## 187 Aegilops tauschii homology type homologs
## 188 %id. target Aegilops tauschii gene identical to query gene homologs
## 189 %id. query gene identical to target Aegilops tauschii gene homologs
## 190 Aegilops tauschii Gene-order conservation score homologs
## 191 Aegilops tauschii Whole-genome alignment coverage homologs
## 192 dN with Aegilops tauschii homologs
## 193 dS with Aegilops tauschii homologs
## 194 Aegilops tauschii orthology confidence [0 low, 1 high] homologs
## 195 Amborella trichopoda gene stable ID homologs
## 196 Amborella trichopoda gene name homologs
## 197 Amborella trichopoda protein or transcript stable ID homologs
## 198 Amborella trichopoda chromosome/scaffold name homologs
## 199 Amborella trichopoda chromosome/scaffold start (bp) homologs
## 200 Amborella trichopoda chromosome/scaffold end (bp) homologs
## 201 Query protein or transcript ID homologs
## 202 Last common ancestor with Amborella trichopoda homologs
## 203 Amborella trichopoda homology type homologs
## 204 %id. target Amborella trichopoda gene identical to query gene homologs
## 205 %id. query gene identical to target Amborella trichopoda gene homologs
## 206 Amborella trichopoda Gene-order conservation score homologs
## 207 Amborella trichopoda Whole-genome alignment coverage homologs
## 208 dN with Amborella trichopoda homologs
## 209 dS with Amborella trichopoda homologs
## 210 Amborella trichopoda orthology confidence [0 low, 1 high] homologs
## 211 Arabidopsis halleri gene stable ID homologs
## 212 Arabidopsis halleri gene name homologs
## 213 Arabidopsis halleri protein or transcript stable ID homologs
## 214 Arabidopsis halleri chromosome/scaffold name homologs
## 215 Arabidopsis halleri chromosome/scaffold start (bp) homologs
## 216 Arabidopsis halleri chromosome/scaffold end (bp) homologs
## 217 Query protein or transcript ID homologs
## 218 Last common ancestor with Arabidopsis halleri homologs
## 219 Arabidopsis halleri homology type homologs
## 220 %id. target Arabidopsis halleri gene identical to query gene homologs
## 221 %id. query gene identical to target Arabidopsis halleri gene homologs
## 222 Arabidopsis halleri Gene-order conservation score homologs
## 223 Arabidopsis halleri Whole-genome alignment coverage homologs
## 224 dN with Arabidopsis halleri homologs
## 225 dS with Arabidopsis halleri homologs
## 226 Arabidopsis halleri orthology confidence [0 low, 1 high] homologs
## 227 Arabidopsis lyrata gene stable ID homologs
## 228 Arabidopsis lyrata gene name homologs
## 229 Arabidopsis lyrata protein or transcript stable ID homologs
## 230 Arabidopsis lyrata chromosome/scaffold name homologs
## 231 Arabidopsis lyrata chromosome/scaffold start (bp) homologs
## 232 Arabidopsis lyrata chromosome/scaffold end (bp) homologs
## 233 Query protein or transcript ID homologs
## 234 Last common ancestor with Arabidopsis lyrata homologs
## 235 Arabidopsis lyrata homology type homologs
## 236 %id. target Arabidopsis lyrata gene identical to query gene homologs
## 237 %id. query gene identical to target Arabidopsis lyrata gene homologs
## 238 Arabidopsis lyrata Gene-order conservation score homologs
## 239 Arabidopsis lyrata Whole-genome alignment coverage homologs
## 240 dN with Arabidopsis lyrata homologs
## 241 dS with Arabidopsis lyrata homologs
## 242 Arabidopsis lyrata orthology confidence [0 low, 1 high] homologs
## 243 Beta vulgaris gene stable ID homologs
## 244 Beta vulgaris gene name homologs
## 245 Beta vulgaris protein or transcript stable ID homologs
## 246 Beta vulgaris chromosome/scaffold name homologs
## 247 Beta vulgaris chromosome/scaffold start (bp) homologs
## 248 Beta vulgaris chromosome/scaffold end (bp) homologs
## 249 Query protein or transcript ID homologs
## 250 Last common ancestor with Beta vulgaris homologs
## 251 Beta vulgaris homology type homologs
## 252 %id. target Beta vulgaris gene identical to query gene homologs
## 253 %id. query gene identical to target Beta vulgaris gene homologs
## 254 Beta vulgaris Gene-order conservation score homologs
## 255 Beta vulgaris Whole-genome alignment coverage homologs
## 256 dN with Beta vulgaris homologs
## 257 dS with Beta vulgaris homologs
## 258 Beta vulgaris orthology confidence [0 low, 1 high] homologs
## 259 Brachypodium distachyon gene stable ID homologs
## 260 Brachypodium distachyon gene name homologs
## 261 Brachypodium distachyon protein or transcript stable ID homologs
## 262 Brachypodium distachyon chromosome/scaffold name homologs
## 263 Brachypodium distachyon chromosome/scaffold start (bp) homologs
## 264 Brachypodium distachyon chromosome/scaffold end (bp) homologs
## 265 Query protein or transcript ID homologs
## 266 Last common ancestor with Brachypodium distachyon homologs
## 267 Brachypodium distachyon homology type homologs
## 268 %id. target Brachypodium distachyon gene identical to query gene homologs
## 269 %id. query gene identical to target Brachypodium distachyon gene homologs
## 270 Brachypodium distachyon Gene-order conservation score homologs
## 271 Brachypodium distachyon Whole-genome alignment coverage homologs
## 272 dN with Brachypodium distachyon homologs
## 273 dS with Brachypodium distachyon homologs
## 274 Brachypodium distachyon orthology confidence [0 low, 1 high] homologs
## 275 Brassica napus gene stable ID homologs
## 276 Brassica napus gene name homologs
## 277 Brassica napus protein or transcript stable ID homologs
## 278 Brassica napus chromosome/scaffold name homologs
## 279 Brassica napus chromosome/scaffold start (bp) homologs
## 280 Brassica napus chromosome/scaffold end (bp) homologs
## 281 Query protein or transcript ID homologs
## 282 Last common ancestor with Brassica napus homologs
## 283 Brassica napus homology type homologs
## 284 %id. target Brassica napus gene identical to query gene homologs
## 285 %id. query gene identical to target Brassica napus gene homologs
## 286 Brassica napus Gene-order conservation score homologs
## 287 Brassica napus Whole-genome alignment coverage homologs
## 288 dN with Brassica napus homologs
## 289 dS with Brassica napus homologs
## 290 Brassica napus orthology confidence [0 low, 1 high] homologs
## 291 Brassica oleracea gene stable ID homologs
## 292 Brassica oleracea gene name homologs
## 293 Brassica oleracea protein or transcript stable ID homologs
## 294 Brassica oleracea chromosome/scaffold name homologs
## 295 Brassica oleracea chromosome/scaffold start (bp) homologs
## 296 Brassica oleracea chromosome/scaffold end (bp) homologs
## 297 Query protein or transcript ID homologs
## 298 Last common ancestor with Brassica oleracea homologs
## 299 Brassica oleracea homology type homologs
## 300 %id. target Brassica oleracea gene identical to query gene homologs
## 301 %id. query gene identical to target Brassica oleracea gene homologs
## 302 Brassica oleracea Gene-order conservation score homologs
## 303 Brassica oleracea Whole-genome alignment coverage homologs
## 304 dN with Brassica oleracea homologs
## 305 dS with Brassica oleracea homologs
## 306 Brassica oleracea orthology confidence [0 low, 1 high] homologs
## 307 Brassica rapa gene stable ID homologs
## 308 Brassica rapa gene name homologs
## 309 Brassica rapa protein or transcript stable ID homologs
## 310 Brassica rapa chromosome/scaffold name homologs
## 311 Brassica rapa chromosome/scaffold start (bp) homologs
## 312 Brassica rapa chromosome/scaffold end (bp) homologs
## 313 Query protein or transcript ID homologs
## 314 Last common ancestor with Brassica rapa homologs
## 315 Brassica rapa homology type homologs
## 316 %id. target Brassica rapa gene identical to query gene homologs
## 317 %id. query gene identical to target Brassica rapa gene homologs
## 318 Brassica rapa Gene-order conservation score homologs
## 319 Brassica rapa Whole-genome alignment coverage homologs
## 320 dN with Brassica rapa homologs
## 321 dS with Brassica rapa homologs
## 322 Brassica rapa orthology confidence [0 low, 1 high] homologs
## 323 Chlamydomonas reinhardtii gene stable ID homologs
## 324 Chlamydomonas reinhardtii gene name homologs
## 325 Chlamydomonas reinhardtii protein or transcript stable ID homologs
## 326 Chlamydomonas reinhardtii chromosome/scaffold name homologs
## 327 Chlamydomonas reinhardtii chromosome/scaffold start (bp) homologs
## 328 Chlamydomonas reinhardtii chromosome/scaffold end (bp) homologs
## 329 Query protein or transcript ID homologs
## 330 Last common ancestor with Chlamydomonas reinhardtii homologs
## 331 Chlamydomonas reinhardtii homology type homologs
## 332 %id. target Chlamydomonas reinhardtii gene identical to query gene homologs
## 333 %id. query gene identical to target Chlamydomonas reinhardtii gene homologs
## [ reached getOption("max.print") -- omitted 863 rows ]go <- biomaRt::getBM(attributes=c("go_id", "tair_locus", "name_1006"), mart=m)
str(go)## 'data.frame': 213986 obs. of 3 variables:
## $ go_id : chr "" "" "" "" ...
## $ tair_locus: chr "AT3G11415" "AT1G31258" "AT5G24735" "AT2G45780" ...
## $ name_1006 : chr "" "" "" "" ...go <- go[go[,3]!="",]; go[,3] <- as.character(go[,3])
str(go)## 'data.frame': 210117 obs. of 3 variables:
## $ go_id : chr "GO:0034599" "GO:0006508" "GO:0000166" "GO:0005524" ...
## $ tair_locus: chr "AT3G05780" "AT3G05780" "AT3G05780" "AT3G05780" ...
## $ name_1006 : chr "cellular response to oxidative stress" "proteolysis" "nucleotide binding" "ATP binding" ...go[go[,3]=="molecular_function", 3] <- "F"; go[go[,3]=="biological_process", 3] <- "P"; go[go[,3]=="cellular_component", 3] <- "C"
str(go)## 'data.frame': 210117 obs. of 3 variables:
## $ go_id : chr "GO:0034599" "GO:0006508" "GO:0000166" "GO:0005524" ...
## $ tair_locus: chr "AT3G05780" "AT3G05780" "AT3G05780" "AT3G05780" ...
## $ name_1006 : chr "cellular response to oxidative stress" "proteolysis" "nucleotide binding" "ATP binding" ...go[1:4,]## go_id tair_locus name_1006
## 1357 GO:0034599 AT3G05780 cellular response to oxidative stress
## 1358 GO:0006508 AT3G05780 proteolysis
## 1359 GO:0000166 AT3G05780 nucleotide binding
## 1360 GO:0005524 AT3G05780 ATP bindingif (FALSE) {
listMarts() # To choose BioMart database
listMarts(host="plants.ensembl.org")
m <- useMart("ensembl", host="ensembl.org")
listDatasets(m) # Choose data types you want to download
m <- useMart("ensembl", dataset="xmaculatus_gene_ensembl", host="ensembl.org")
listAttributes(m)
go <- biomaRt::getBM(attributes=c("go_id", "band", "name_1006"), mart=m)
go <- go[go[,3]!="",]; go[,3] <- as.character(go[,3])
go[go[,3]=="molecular_function", 3] <- "F"; go[go[,3]=="biological_process", 3] <- "P"; go[go[,3]=="cellular_component", 3] <- "C"
go[1:4,]
}
print(makeCATdb)## function(myfile, lib=NULL, org="", colno = c(1,2,3), idconv=NULL, rootUK=FALSE) {
## if(!is.null(lib) & !is.null(myfile)) stop("Arguments myfile and lib are exclusive. One of them needs to be assigned NULL.")
## if(!is.null(lib)) {
## catdf <- .sampleDFgene2GO(lib=lib)
## }
## if(!is.null(myfile)) {
## catdf <- .readGOorg(myfile=myfile, org=org, colno=colno)
## }
## catlist <- .gene2GOlist(catdf=catdf, rootUK=rootUK)
## catdblist <- c(catmap=list(catdf), catlist=list(catlist), idconv=list(idconv))
## catdb <- as(catdblist, "catDB")
## cat("\n", "makeCATdb successful.", "\n")
## return(catdb)
## }dir.create("./data/GO")## Warning in dir.create("./data/GO"): './data/GO' already existswrite.table(go, "data/GO/GOannotationsBiomart_mod.txt", quote=FALSE, row.names=FALSE, col.names=FALSE, sep="\t")
debug(makeCATdb)
debug(.gene2GOlist)
debug(.readGOorg)
# browser()
catdb <- makeCATdb(myfile="data/GO/GOannotationsBiomart_mod.txt", lib=NULL, org="", colno=c(1,2,3), idconv=NULL)## debugging in: makeCATdb(myfile = "data/GO/GOannotationsBiomart_mod.txt", lib = NULL,
## org = "", colno = c(1, 2, 3), idconv = NULL)
## debug at <text>#81: {
## if (!is.null(lib) & !is.null(myfile))
## stop("Arguments myfile and lib are exclusive. One of them needs to be assigned NULL.")
## if (!is.null(lib)) {
## catdf <- .sampleDFgene2GO(lib = lib)
## }
## if (!is.null(myfile)) {
## catdf <- .readGOorg(myfile = myfile, org = org, colno = colno)
## }
## catlist <- .gene2GOlist(catdf = catdf, rootUK = rootUK)
## catdblist <- c(catmap = list(catdf), catlist = list(catlist),
## idconv = list(idconv))
## catdb <- as(catdblist, "catDB")
## cat("\n", "makeCATdb successful.", "\n")
## return(catdb)
## }
## debug at <text>#82: if (!is.null(lib) & !is.null(myfile)) stop("Arguments myfile and lib are exclusive. One of them needs to be assigned NULL.")
## debug at <text>#83: if (!is.null(lib)) {
## catdf <- .sampleDFgene2GO(lib = lib)
## }
## debug at <text>#86: if (!is.null(myfile)) {
## catdf <- .readGOorg(myfile = myfile, org = org, colno = colno)
## }
## debug at <text>#87: catdf <- .readGOorg(myfile = myfile, org = org, colno = colno)
## debugging in: .readGOorg(myfile = myfile, org = org, colno = colno)
## debug at <text>#8: {
## go_org <- read.delim(myfile, na.strings = "", header = FALSE,
## comment.char = "!", sep = "\t")
## go_org <- go_org[, colno]
## names(go_org) <- c("GOID", "GeneID", "GOCAT")
## if (org == "Arabidopsis") {
## go_org[, "GeneID"] <- gsub(".*(AT.G\\d\\d\\d\\d\\d).*",
## "\\1", as.character(go_org[, 2]), perl = TRUE)
## go_org <- go_org[grep("^AT.G\\d\\d\\d\\d\\d", as.character(go_org$GeneID),
## perl = TRUE), ]
## go_org <- go_org[!duplicated(paste(go_org[, "GOID"],
## gsub("\\.\\d{1,}", "", as.character(go_org[, "GeneID"]),
## perl = TRUE), sep = "_")), ]
## }
## go_org <- na.omit(go_org)
## gocat <- as.character(go_org$GOCAT)
## gocat[gocat == "molecular_function"] <- "F"
## gocat[gocat == "biological_process"] <- "P"
## gocat[gocat == "cellular_component"] <- "C"
## go_org[, "GOCAT"] <- gocat
## GO_MF_DF <- go_org[go_org[, 3] == "F", ]
## GO_BP_DF <- go_org[go_org[, 3] == "P", ]
## GO_CC_DF <- go_org[go_org[, 3] == "C", ]
## go_df <- data.frame(GOID = names(Term(GOTERM)), Term = Term(GOTERM),
## Ont = Ontology(GOTERM))
## go_df <- na.omit(go_df)
## dflist <- list(D_BP = GO_BP_DF, D_CC = GO_CC_DF, D_MF = GO_MF_DF,
## GO_DF = go_df)
## return(dflist)
## }
## debug at <text>#10: go_org <- read.delim(myfile, na.strings = "", header = FALSE,
## comment.char = "!", sep = "\t")
## debug at <text>#11: go_org <- go_org[, colno]
## debug at <text>#12: names(go_org) <- c("GOID", "GeneID", "GOCAT")
## debug at <text>#13: if (org == "Arabidopsis") {
## go_org[, "GeneID"] <- gsub(".*(AT.G\\d\\d\\d\\d\\d).*", "\\1",
## as.character(go_org[, 2]), perl = TRUE)
## go_org <- go_org[grep("^AT.G\\d\\d\\d\\d\\d", as.character(go_org$GeneID),
## perl = TRUE), ]
## go_org <- go_org[!duplicated(paste(go_org[, "GOID"], gsub("\\.\\d{1,}",
## "", as.character(go_org[, "GeneID"]), perl = TRUE), sep = "_")),
## ]
## }
## debug at <text>#18: go_org <- na.omit(go_org)
## debug at <text>#20: gocat <- as.character(go_org$GOCAT)
## debug at <text>#21: gocat[gocat == "molecular_function"] <- "F"
## debug at <text>#22: gocat[gocat == "biological_process"] <- "P"
## debug at <text>#23: gocat[gocat == "cellular_component"] <- "C"
## debug at <text>#24: go_org[, "GOCAT"] <- gocat
## debug at <text>#26: GO_MF_DF <- go_org[go_org[, 3] == "F", ]
## debug at <text>#27: GO_BP_DF <- go_org[go_org[, 3] == "P", ]
## debug at <text>#28: GO_CC_DF <- go_org[go_org[, 3] == "C", ]
## debug at <text>#31: go_df <- data.frame(GOID = names(Term(GOTERM)), Term = Term(GOTERM),
## Ont = Ontology(GOTERM))
## debug at <text>#32: go_df <- na.omit(go_df)
## debug at <text>#35: dflist <- list(D_BP = GO_BP_DF, D_CC = GO_CC_DF, D_MF = GO_MF_DF,
## GO_DF = go_df)
## debug at <text>#36: return(dflist)
## exiting from: .readGOorg(myfile = myfile, org = org, colno = colno)
## debug at <text>#89: catlist <- .gene2GOlist(catdf = catdf, rootUK = rootUK)
## debugging in: .gene2GOlist(catdf = catdf, rootUK = rootUK)
## debug at <text>#38: {
## GO_MF_DF <- catdf$D_MF
## GO_BP_DF <- catdf$D_BP
## GO_CC_DF <- catdf$D_CC
## for (i in c("MF", "BP", "CC")) {
## if (i == "MF") {
## go_offspr_list <- as.list(GOMFOFFSPRING)
## }
## if (i == "BP") {
## go_offspr_list <- as.list(GOBPOFFSPRING)
## }
## if (i == "CC") {
## go_offspr_list <- as.list(GOCCOFFSPRING)
## }
## go_offspr_list <- lapply(go_offspr_list, unlist)
## go_offspr_list <- lapply(go_offspr_list, as.vector)
## go_offspr_list_temp <- lapply(names(go_offspr_list),
## function(x) c(x, go_offspr_list[[x]]))
## names(go_offspr_list_temp) <- names(go_offspr_list)
## go_offspr_list <- go_offspr_list_temp
## go_offspr_list <- lapply(go_offspr_list, function(x) x[!is.na(x)])
## if (rootUK == TRUE) {
## if (i == "MF") {
## go_offspr_list[["GO:0003674"]] <- c("GO:0003674")
## }
## if (i == "BP") {
## go_offspr_list[["GO:0008150"]] <- c("GO:0008150")
## }
## if (i == "CC") {
## go_offspr_list[["GO:0005575"]] <- c("GO:0005575")
## }
## }
## if (i == "MF") {
## MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in%
## x, 2])))
## }
## if (i == "BP") {
## BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in%
## x, 2])))
## }
## if (i == "CC") {
## CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in%
## x, 2])))
## }
## cat("\n", paste("'", i, "_node_gene_list'", sep = ""),
## "with gene-to-GO-OFFSPRING associations created.",
## "\n")
## }
## node_gene_list <- list(L_BP = BP_node_gene_list, L_CC = CC_node_gene_list,
## L_MF = MF_node_gene_list)
## return(node_gene_list)
## }
## debug at <text>#41: GO_MF_DF <- catdf$D_MF
## debug at <text>#42: GO_BP_DF <- catdf$D_BP
## debug at <text>#43: GO_CC_DF <- catdf$D_CC
## debug at <text>#46: for (i in c("MF", "BP", "CC")) {
## if (i == "MF") {
## go_offspr_list <- as.list(GOMFOFFSPRING)
## }
## if (i == "BP") {
## go_offspr_list <- as.list(GOBPOFFSPRING)
## }
## if (i == "CC") {
## go_offspr_list <- as.list(GOCCOFFSPRING)
## }
## go_offspr_list <- lapply(go_offspr_list, unlist)
## go_offspr_list <- lapply(go_offspr_list, as.vector)
## go_offspr_list_temp <- lapply(names(go_offspr_list), function(x) c(x,
## go_offspr_list[[x]]))
## names(go_offspr_list_temp) <- names(go_offspr_list)
## go_offspr_list <- go_offspr_list_temp
## go_offspr_list <- lapply(go_offspr_list, function(x) x[!is.na(x)])
## if (rootUK == TRUE) {
## if (i == "MF") {
## go_offspr_list[["GO:0003674"]] <- c("GO:0003674")
## }
## if (i == "BP") {
## go_offspr_list[["GO:0008150"]] <- c("GO:0008150")
## }
## if (i == "CC") {
## go_offspr_list[["GO:0005575"]] <- c("GO:0005575")
## }
## }
## if (i == "MF") {
## MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in%
## x, 2])))
## }
## if (i == "BP") {
## BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in%
## x, 2])))
## }
## if (i == "CC") {
## CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in%
## x, 2])))
## }
## cat("\n", paste("'", i, "_node_gene_list'", sep = ""), "with gene-to-GO-OFFSPRING associations created.",
## "\n")
## }
## debug at <text>#47: if (i == "MF") {
## go_offspr_list <- as.list(GOMFOFFSPRING)
## }
## debug at <text>#48: go_offspr_list <- as.list(GOMFOFFSPRING)
## debug at <text>#49: if (i == "BP") {
## go_offspr_list <- as.list(GOBPOFFSPRING)
## }
## debug at <text>#51: if (i == "CC") {
## go_offspr_list <- as.list(GOCCOFFSPRING)
## }
## debug at <text>#53: go_offspr_list <- lapply(go_offspr_list, unlist)
## debug at <text>#53: go_offspr_list <- lapply(go_offspr_list, as.vector)
## debug at <text>#54: go_offspr_list_temp <- lapply(names(go_offspr_list), function(x) c(x,
## go_offspr_list[[x]]))
## debug at <text>#55: names(go_offspr_list_temp) <- names(go_offspr_list)
## debug at <text>#56: go_offspr_list <- go_offspr_list_temp
## debug at <text>#57: go_offspr_list <- lapply(go_offspr_list, function(x) x[!is.na(x)])
## debug at <text>#60: if (rootUK == TRUE) {
## if (i == "MF") {
## go_offspr_list[["GO:0003674"]] <- c("GO:0003674")
## }
## if (i == "BP") {
## go_offspr_list[["GO:0008150"]] <- c("GO:0008150")
## }
## if (i == "CC") {
## go_offspr_list[["GO:0005575"]] <- c("GO:0005575")
## }
## }
## debug at <text>#67: if (i == "MF") {
## MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#68: MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in%
## x, 2])))
## debug at <text>#70: if (i == "BP") {
## BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#73: if (i == "CC") {
## CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#76: cat("\n", paste("'", i, "_node_gene_list'", sep = ""), "with gene-to-GO-OFFSPRING associations created.",
## "\n")
##
## 'MF_node_gene_list' with gene-to-GO-OFFSPRING associations created.
## debug at <text>#47: if (i == "MF") {
## go_offspr_list <- as.list(GOMFOFFSPRING)
## }
## debug at <text>#49: if (i == "BP") {
## go_offspr_list <- as.list(GOBPOFFSPRING)
## }
## debug at <text>#50: go_offspr_list <- as.list(GOBPOFFSPRING)
## debug at <text>#51: if (i == "CC") {
## go_offspr_list <- as.list(GOCCOFFSPRING)
## }
## debug at <text>#53: go_offspr_list <- lapply(go_offspr_list, unlist)
## debug at <text>#53: go_offspr_list <- lapply(go_offspr_list, as.vector)
## debug at <text>#54: go_offspr_list_temp <- lapply(names(go_offspr_list), function(x) c(x,
## go_offspr_list[[x]]))
## debug at <text>#55: names(go_offspr_list_temp) <- names(go_offspr_list)
## debug at <text>#56: go_offspr_list <- go_offspr_list_temp
## debug at <text>#57: go_offspr_list <- lapply(go_offspr_list, function(x) x[!is.na(x)])
## debug at <text>#60: if (rootUK == TRUE) {
## if (i == "MF") {
## go_offspr_list[["GO:0003674"]] <- c("GO:0003674")
## }
## if (i == "BP") {
## go_offspr_list[["GO:0008150"]] <- c("GO:0008150")
## }
## if (i == "CC") {
## go_offspr_list[["GO:0005575"]] <- c("GO:0005575")
## }
## }
## debug at <text>#67: if (i == "MF") {
## MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#70: if (i == "BP") {
## BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#71: BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in%
## x, 2])))
## debug at <text>#73: if (i == "CC") {
## CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#76: cat("\n", paste("'", i, "_node_gene_list'", sep = ""), "with gene-to-GO-OFFSPRING associations created.",
## "\n")
##
## 'BP_node_gene_list' with gene-to-GO-OFFSPRING associations created.
## debug at <text>#47: if (i == "MF") {
## go_offspr_list <- as.list(GOMFOFFSPRING)
## }
## debug at <text>#49: if (i == "BP") {
## go_offspr_list <- as.list(GOBPOFFSPRING)
## }
## debug at <text>#51: if (i == "CC") {
## go_offspr_list <- as.list(GOCCOFFSPRING)
## }
## debug at <text>#52: go_offspr_list <- as.list(GOCCOFFSPRING)
## debug at <text>#53: go_offspr_list <- lapply(go_offspr_list, unlist)
## debug at <text>#53: go_offspr_list <- lapply(go_offspr_list, as.vector)
## debug at <text>#54: go_offspr_list_temp <- lapply(names(go_offspr_list), function(x) c(x,
## go_offspr_list[[x]]))
## debug at <text>#55: names(go_offspr_list_temp) <- names(go_offspr_list)
## debug at <text>#56: go_offspr_list <- go_offspr_list_temp
## debug at <text>#57: go_offspr_list <- lapply(go_offspr_list, function(x) x[!is.na(x)])
## debug at <text>#60: if (rootUK == TRUE) {
## if (i == "MF") {
## go_offspr_list[["GO:0003674"]] <- c("GO:0003674")
## }
## if (i == "BP") {
## go_offspr_list[["GO:0008150"]] <- c("GO:0008150")
## }
## if (i == "CC") {
## go_offspr_list[["GO:0005575"]] <- c("GO:0005575")
## }
## }
## debug at <text>#67: if (i == "MF") {
## MF_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_MF_DF[GO_MF_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#70: if (i == "BP") {
## BP_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_BP_DF[GO_BP_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#73: if (i == "CC") {
## CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in%
## x, 2])))
## }
## debug at <text>#74: CC_node_gene_list <- lapply(go_offspr_list, function(x) unique(as.vector(GO_CC_DF[GO_CC_DF$GOID %in%
## x, 2])))
## debug at <text>#76: cat("\n", paste("'", i, "_node_gene_list'", sep = ""), "with gene-to-GO-OFFSPRING associations created.",
## "\n")
##
## 'CC_node_gene_list' with gene-to-GO-OFFSPRING associations created.
## debug at <text>#78: node_gene_list <- list(L_BP = BP_node_gene_list, L_CC = CC_node_gene_list,
## L_MF = MF_node_gene_list)
## debug at <text>#79: return(node_gene_list)
## exiting from: .gene2GOlist(catdf = catdf, rootUK = rootUK)
## debug at <text>#90: catdblist <- c(catmap = list(catdf), catlist = list(catlist),
## idconv = list(idconv))
## debug at <text>#91: catdb <- as(catdblist, "catDB")
## debug at <text>#92: cat("\n", "makeCATdb successful.", "\n")
##
## makeCATdb successful.
## debug at <text>#93: return(catdb)
## exiting from: makeCATdb(myfile = "data/GO/GOannotationsBiomart_mod.txt", lib = NULL,
## org = "", colno = c(1, 2, 3), idconv = NULL)# makeCATdb() is part of systemPipeR::GOHyperGALL
browser()## Called from: eval(expr, envir, enclos)catdb## An instance of 'catDB' containing:
## catmap: 4 mapping data frames (D_BP, D_CC, D_MF, GO_DF)
## catlist: 3 category lists (L_BP, L_CC, L_MF)
## idconv: 0 id conversion data frames ()save(catdb, file="data/GO/catdb.RData")7.2 Batch GO term enrichment analysis
Apply the enrichment analysis to the DEG sets obtained the above differential expression analysis. Note, in the following example the FDR filter is set here to an unreasonably high value, simply because of the small size of the toy data set used in this vignette. Batch enrichment analysis of many gene sets is performed with the function. When method=all, it returns all GO terms passing the p-value cutoff specified under the cutoff arguments. When method=slim, it returns only the GO terms specified under the myslimv argument. The given example shows how a GO slim vector for a specific organism can be obtained from BioMart.
# takes time :45
displayKnitStatus()
library("biomaRt")
load("data/GO/catdb.RData")
debug(filterDEGs)
DEG_list <- filterDEGs(degDF=edgeDF, filter=c(Fold=2, FDR=50), plot=FALSE)## debugging in: filterDEGs(degDF = edgeDF, filter = c(Fold = 2, FDR = 50), plot = FALSE)
## debug: {
## pval <- degDF[, grep("_FDR$", colnames(degDF)), drop = FALSE]
## log2FC <- degDF[, grep("_logFC$", colnames(degDF)), drop = FALSE]
## pf <- pval <= filter["FDR"]/100 & (log2FC >= log2(filter["Fold"]) |
## log2FC <= -log2(filter["Fold"]))
## colnames(pf) <- gsub("_FDR", "", colnames(pf))
## pf[is.na(pf)] <- FALSE
## DEGlistUPorDOWN <- sapply(colnames(pf), function(x) rownames(pf[pf[,
## x, drop = FALSE], , drop = FALSE]), simplify = FALSE)
## pf <- pval <= filter["FDR"]/100 & log2FC >= log2(filter["Fold"])
## colnames(pf) <- gsub("_FDR", "", colnames(pf))
## pf[is.na(pf)] <- FALSE
## DEGlistUP <- sapply(colnames(pf), function(x) rownames(pf[pf[,
## x, drop = FALSE], , drop = FALSE]), simplify = FALSE)
## pf <- pval <= filter["FDR"]/100 & log2FC <= -log2(filter["Fold"])
## colnames(pf) <- gsub("_FDR", "", colnames(pf))
## pf[is.na(pf)] <- FALSE
## DEGlistDOWN <- sapply(colnames(pf), function(x) rownames(pf[pf[,
## x, drop = FALSE], , drop = FALSE]), simplify = FALSE)
## df <- data.frame(Comparisons = names(DEGlistUPorDOWN), Counts_Up_or_Down = sapply(DEGlistUPorDOWN,
## length), Counts_Up = sapply(DEGlistUP, length), Counts_Down = sapply(DEGlistDOWN,
## length))
## resultlist <- list(UporDown = DEGlistUPorDOWN, Up = DEGlistUP,
## Down = DEGlistDOWN, Summary = df)
## if (plot == TRUE) {
## mytitle <- paste("DEG Counts (", names(filter)[1], ": ",
## filter[1], " & ", names(filter)[2], ": ", filter[2],
## "%)", sep = "")
## df_plot <- data.frame(Comparisons = rep(as.character(df$Comparisons),
## 2), Counts = c(df$Counts_Up, df$Counts_Down), Type = rep(c("Up",
## "Down"), each = length(df[, 1])))
## p <- ggplot(df_plot, aes(Comparisons, Counts, fill = Type)) +
## geom_bar(position = "stack", stat = "identity") +
## coord_flip() + theme(axis.text.y = element_text(angle = 0,
## hjust = 1)) + ggtitle(mytitle)
## print(p)
## }
## return(resultlist)
## }
## debug: pval <- degDF[, grep("_FDR$", colnames(degDF)), drop = FALSE]
## debug: log2FC <- degDF[, grep("_logFC$", colnames(degDF)), drop = FALSE]
## debug: pf <- pval <= filter["FDR"]/100 & (log2FC >= log2(filter["Fold"]) |
## log2FC <= -log2(filter["Fold"]))
## debug: colnames(pf) <- gsub("_FDR", "", colnames(pf))
## debug: pf[is.na(pf)] <- FALSE
## debug: DEGlistUPorDOWN <- sapply(colnames(pf), function(x) rownames(pf[pf[,
## x, drop = FALSE], , drop = FALSE]), simplify = FALSE)
## debug: pf <- pval <= filter["FDR"]/100 & log2FC >= log2(filter["Fold"])
## debug: colnames(pf) <- gsub("_FDR", "", colnames(pf))
## debug: pf[is.na(pf)] <- FALSE
## debug: DEGlistUP <- sapply(colnames(pf), function(x) rownames(pf[pf[,
## x, drop = FALSE], , drop = FALSE]), simplify = FALSE)
## debug: pf <- pval <= filter["FDR"]/100 & log2FC <= -log2(filter["Fold"])
## debug: colnames(pf) <- gsub("_FDR", "", colnames(pf))
## debug: pf[is.na(pf)] <- FALSE
## debug: DEGlistDOWN <- sapply(colnames(pf), function(x) rownames(pf[pf[,
## x, drop = FALSE], , drop = FALSE]), simplify = FALSE)
## debug: df <- data.frame(Comparisons = names(DEGlistUPorDOWN), Counts_Up_or_Down = sapply(DEGlistUPorDOWN,
## length), Counts_Up = sapply(DEGlistUP, length), Counts_Down = sapply(DEGlistDOWN,
## length))
## debug: resultlist <- list(UporDown = DEGlistUPorDOWN, Up = DEGlistUP,
## Down = DEGlistDOWN, Summary = df)
## debug: if (plot == TRUE) {
## mytitle <- paste("DEG Counts (", names(filter)[1], ": ",
## filter[1], " & ", names(filter)[2], ": ", filter[2],
## "%)", sep = "")
## df_plot <- data.frame(Comparisons = rep(as.character(df$Comparisons),
## 2), Counts = c(df$Counts_Up, df$Counts_Down), Type = rep(c("Up",
## "Down"), each = length(df[, 1])))
## p <- ggplot(df_plot, aes(Comparisons, Counts, fill = Type)) +
## geom_bar(position = "stack", stat = "identity") + coord_flip() +
## theme(axis.text.y = element_text(angle = 0, hjust = 1)) +
## ggtitle(mytitle)
## print(p)
## }
## debug: return(resultlist)
## exiting from: filterDEGs(degDF = edgeDF, filter = c(Fold = 2, FDR = 50), plot = FALSE)str(DEG_list) # Actual DEG_list## List of 4
## $ UporDown:List of 9
## ..$ M1-A1 : chr [1:24] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## ..$ M1-V1 : chr [1:1059] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## ..$ A1-V1 : chr [1:50] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" ...
## ..$ M6-A6 : chr [1:2373] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" ...
## ..$ M6-V6 : chr [1:1311] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" ...
## ..$ A6-V6 : chr [1:539] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## ..$ M12-A12: chr [1:3203] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" ...
## ..$ M12-V12: chr [1:2228] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" ...
## ..$ A12-V12: chr [1:988] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" ...
## $ Up :List of 9
## ..$ M1-A1 : chr [1:2] "AT3G21870" "ATCG01310"
## ..$ M1-V1 : chr [1:615] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## ..$ A1-V1 : chr [1:29] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" ...
## ..$ M6-A6 : chr [1:1030] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" ...
## ..$ M6-V6 : chr [1:739] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" ...
## ..$ A6-V6 : chr [1:392] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## ..$ M12-A12: chr [1:1391] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" ...
## ..$ M12-V12: chr [1:798] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" ...
## ..$ A12-V12: chr [1:388] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" ...
## $ Down :List of 9
## ..$ M1-A1 : chr [1:22] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## ..$ M1-V1 : chr [1:444] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" ...
## ..$ A1-V1 : chr [1:21] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" ...
## ..$ M6-A6 : chr [1:1343] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" ...
## ..$ M6-V6 : chr [1:572] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" ...
## ..$ A6-V6 : chr [1:147] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" ...
## ..$ M12-A12: chr [1:1812] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" ...
## ..$ M12-V12: chr [1:1430] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" ...
## ..$ A12-V12: chr [1:600] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" ...
## $ Summary :'data.frame': 9 obs. of 4 variables:
## ..$ Comparisons : Factor w/ 9 levels "A1-V1","A12-V12",..: 4 5 1 8 9 3 6 7 2
## ..$ Counts_Up_or_Down: int [1:9] 24 1059 50 2373 1311 539 3203 2228 988
## ..$ Counts_Up : int [1:9] 2 615 29 1030 739 392 1391 798 388
## ..$ Counts_Down : int [1:9] 22 444 21 1343 572 147 1812 1430 600DEG_list## $UporDown
## $UporDown$`M1-A1`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT3G21870" "AT4G12480" "AT4G18540" "AT4G23550"
## [17] "AT4G33980" "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100" "ATCG01310"
##
## $UporDown$`M1-V1`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G01640" "AT1G02710" "AT1G02820" "AT1G02920" "AT1G02930" "AT1G03050" "AT1G03055"
## [15] "AT1G03300" "AT1G03360" "AT1G03905" "AT1G04220" "AT1G04250" "AT1G04280" "AT1G04530"
## [22] "AT1G04550" "AT1G04620" "AT1G04660" "AT1G04770" "AT1G04990" "AT1G05020" "AT1G05300"
## [29] "AT1G05560" "AT1G05562" "AT1G05680" "AT1G05710" "AT1G06460" "AT1G07010" "AT1G07040"
## [36] "AT1G07050" "AT1G07160" "AT1G07180" "AT1G07420" "AT1G07485" "AT1G07490" "AT1G08610"
## [43] "AT1G08980" "AT1G09180" "AT1G09820" "AT1G09900" "AT1G10040" "AT1G10070" "AT1G10200"
## [50] "AT1G10460" "AT1G10710" "AT1G10960" "AT1G10990" "AT1G11200" "AT1G11362" "AT1G11925"
## [57] "AT1G11950" "AT1G12330" "AT1G12370" "AT1G12710" "AT1G12730" "AT1G13030" "AT1G13080"
## [64] "AT1G13110" "AT1G13270" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150"
## [71] "AT1G14170" "AT1G14345" "AT1G14540" "AT1G14840" "AT1G14870" "AT1G15125" "AT1G15290"
## [78] "AT1G15510" "AT1G15550" "AT1G15670" "AT1G15870" "AT1G15890" "AT1G16090" "AT1G16350"
## [85] "AT1G16390" "AT1G16730" "AT1G17050" "AT1G17665" "AT1G18800" "AT1G19130" "AT1G19140"
## [92] "AT1G19150" "AT1G19370" "AT1G19450" "AT1G19700" "AT1G20010" "AT1G20620" "AT1G20630"
## [99] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G21500" "AT1G22180"
## [106] "AT1G22370" "AT1G22480" "AT1G22490" "AT1G22590" "AT1G22770" "AT1G22850" "AT1G23100"
## [113] "AT1G23410" "AT1G23740" "AT1G24148" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26220"
## [120] "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26420" "AT1G26665" "AT1G26761" "AT1G27020"
## [127] "AT1G27120" "AT1G27480" "AT1G27630" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G29160"
## [134] "AT1G29600" "AT1G29660" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700"
## [141] "AT1G30755" "AT1G30960" "AT1G31690" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760"
## [148] "AT1G32900" "AT1G33030" "AT1G33170" "AT1G33410" "AT1G34380" "AT1G42550" "AT1G42970"
## [155] "AT1G44000" "AT1G44446" "AT1G48100" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48480"
## [162] "AT1G48570" "AT1G48605" "AT1G49010" "AT1G49230" "AT1G49430" "AT1G49490" "AT1G49660"
## [169] "AT1G49720" "AT1G50840" "AT1G51080" "AT1G51100" "AT1G51310" "AT1G51610" "AT1G51620"
## [176] "AT1G51850" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52200" "AT1G52830" "AT1G53035"
## [183] "AT1G53090" "AT1G53100" "AT1G53625" "AT1G54500" "AT1G55260" "AT1G55450" "AT1G55960"
## [190] "AT1G56140" "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G58520"
## [197] "AT1G59700" "AT1G59950" "AT1G60730" "AT1G61300" "AT1G61360" "AT1G61420" "AT1G61550"
## [204] "AT1G61560" "AT1G62170" "AT1G62180" "AT1G62630" "AT1G62720" "AT1G62750" "AT1G62760"
## [211] "AT1G62960" "AT1G63180" "AT1G63250" "AT1G64110" "AT1G64220" "AT1G64500" "AT1G64600"
## [218] "AT1G64670" "AT1G64680" "AT1G64760" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [225] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65820" "AT1G65920"
## [232] "AT1G66130" "AT1G66330" "AT1G66540" "AT1G66700" "AT1G66725" "AT1G66780" "AT1G66840"
## [239] "AT1G67370" "AT1G67590" "AT1G67750" "AT1G67970" "AT1G67980" "AT1G68050" "AT1G68440"
## [246] "AT1G69200" "AT1G69520" "AT1G70000" "AT1G70220" "AT1G70250" "AT1G70580" "AT1G70800"
## [253] "AT1G71000" "AT1G71400" "AT1G71520" "AT1G71850" "AT1G72040" "AT1G72270" "AT1G72330"
## [260] "AT1G72416" "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870"
## [267] "AT1G73890" "AT1G74010" "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280"
## [274] "AT1G75830" "AT1G76240" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77580" "AT1G77810"
## [281] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G79440" "AT1G79460"
## [288] "AT1G79680" "AT1G80270" "AT1G80760" "AT2G01280" "AT2G01540" "AT2G01890" "AT2G02010"
## [295] "AT2G02100" "AT2G02150" "AT2G02220" "AT2G02230" "AT2G02410" "AT2G02930" "AT2G03550"
## [302] "AT2G04030" "AT2G04039" "AT2G04790" "AT2G05160" "AT2G05630" "AT2G05753" "AT2G11890"
## [309] "AT2G14170" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G15890" "AT2G16365" "AT2G17740"
## [316] "AT2G17972" "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19190" "AT2G19450" "AT2G19670"
## [323] "AT2G20020" "AT2G20585" "AT2G21130" "AT2G21185" "AT2G21187" "AT2G21320" "AT2G21330"
## [330] "AT2G21660" "AT2G22240" "AT2G22450" "AT2G22970" "AT2G22980" "AT2G23030" "AT2G23110"
## [337] "AT2G23290" "AT2G23340" "AT2G23430" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440"
## [344] "AT2G24540" "AT2G24545" "AT2G24570" "AT2G24580" "AT2G24645" "AT2G24762" "AT2G24820"
## [351] "AT2G25530" "AT2G25680" "AT2G25730" "AT2G25930" "AT2G26080" "AT2G26560" "AT2G26650"
## [358] "AT2G26692" "AT2G27200" "AT2G27420" "AT2G28190" "AT2G28790" "AT2G28930" "AT2G29090"
## [365] "AT2G29720" "AT2G29740" "AT2G30100" "AT2G30150" "AT2G30395" "AT2G30424" "AT2G30520"
## [372] "AT2G30750" "AT2G30760" "AT2G30770" "AT2G31010" "AT2G31380" "AT2G31750" "AT2G31751"
## [379] "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33830" "AT2G33855" "AT2G35760"
## [386] "AT2G35950" "AT2G35980" "AT2G36000" "AT2G36390" "AT2G36590" "AT2G36750" "AT2G36800"
## [393] "AT2G36815" "AT2G37240" "AT2G37430" "AT2G37460" "AT2G37630" "AT2G37940" "AT2G37970"
## [400] "AT2G38465" "AT2G38750" "AT2G38760" "AT2G38860" "AT2G39200" "AT2G39380" "AT2G39400"
## [407] "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39730" "AT2G39900" "AT2G39920"
## [414] "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G41050" "AT2G41250" "AT2G41290"
## [421] "AT2G41660" "AT2G42360" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43590" "AT2G43620"
## [428] "AT2G43650" "AT2G43710" "AT2G43940" "AT2G44080" "AT2G45340" "AT2G46670" "AT2G46790"
## [435] "AT2G46810" "AT2G46830" "AT2G46940" "AT2G47370" "AT2G47390" "AT2G47450" "AT2G47485"
## [442] "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180" "AT3G01440" "AT3G02800"
## [449] "AT3G02830" "AT3G04140" "AT3G04420" "AT3G04950" "AT3G05390" "AT3G06145" "AT3G06520"
## [456] "AT3G06750" "AT3G06920" "AT3G07310" "AT3G07640" "AT3G07650" "AT3G07750" "AT3G07770"
## [463] "AT3G09160" "AT3G09162" "AT3G09190" "AT3G09390" "AT3G09405" "AT3G09600" "AT3G09650"
## [470] "AT3G10040" "AT3G10110" "AT3G10410" "AT3G10525" "AT3G11020" "AT3G11090" "AT3G11110"
## [477] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G12320" "AT3G13450" "AT3G13470"
## [484] "AT3G13700" "AT3G13710" "AT3G14360" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15356"
## [491] "AT3G15518" "AT3G15540" "AT3G15620" "AT3G15850" "AT3G15990" "AT3G16180" "AT3G16360"
## [498] "AT3G16520" "AT3G16530" "AT3G16565" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840"
## [505] "AT3G18080" "AT3G18750" "AT3G19000" "AT3G19210" "AT3G19260" "AT3G19440" "AT3G19450"
## [512] "AT3G19480" "AT3G19615" "AT3G20410" "AT3G21240" "AT3G21390" "AT3G21460" "AT3G21470"
## [519] "AT3G21890" "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G22460" "AT3G23090"
## [526] "AT3G23210" "AT3G23280" "AT3G23510" "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190"
## [533] "AT3G24460" "AT3G25030" "AT3G25670" "AT3G26500" "AT3G26570" "AT3G26670" "AT3G26680"
## [540] "AT3G26740" "AT3G26830" "AT3G27210" "AT3G27300" "AT3G27350" "AT3G27415" "AT3G27416"
## [547] "AT3G28040" "AT3G28370" "AT3G28540" "AT3G30460" "AT3G30720" "AT3G43670" "AT3G43790"
## [554] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46090"
## [561] "AT3G46440" "AT3G46640" "AT3G46690" "AT3G46900" "AT3G47070" "AT3G47360" "AT3G47420"
## [568] "AT3G47430" "AT3G47800" "AT3G47860" "AT3G48280" "AT3G48490" "AT3G48560" "AT3G48660"
## [575] "AT3G48690" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G49240" "AT3G49470" "AT3G49570"
## [582] "AT3G50120" "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50685" "AT3G50810" "AT3G51330"
## [589] "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52450" "AT3G52720" "AT3G52920" "AT3G53700"
## [596] "AT3G53830" "AT3G53920" "AT3G54150" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [603] "AT3G54720" "AT3G54900" "AT3G55150" "AT3G55450" "AT3G56080" "AT3G56160" "AT3G56290"
## [610] "AT3G56300" "AT3G56330" "AT3G56500" "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180"
## [617] "AT3G57190" "AT3G57400" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G58840" "AT3G58990"
## [624] "AT3G59220" "AT3G59250" "AT3G59330" "AT3G59350" "AT3G59400" "AT3G59700" "AT3G59900"
## [631] "AT3G61160" "AT3G61220" "AT3G61780" "AT3G61880" "AT3G62150" "AT3G63160" "AT3G63200"
## [638] "AT3G63380" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [645] "AT4G01080" "AT4G01130" "AT4G01250" "AT4G01535" "AT4G01750" "AT4G02380" "AT4G02520"
## [652] "AT4G02630" "AT4G02990" "AT4G03460" "AT4G03600" "AT4G04020" "AT4G04330" "AT4G04610"
## [659] "AT4G05110" "AT4G09020" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620"
## [666] "AT4G11100" "AT4G11175" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12390" "AT4G12470"
## [673] "AT4G12480" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14270" "AT4G14440"
## [680] "AT4G14690" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550"
## [687] "AT4G15810" "AT4G16140" "AT4G16146" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16820"
## [694] "AT4G16980" "AT4G17140" "AT4G17180" "AT4G17680" "AT4G17880" "AT4G17970" "AT4G18430"
## [701] "AT4G18540" "AT4G18800" "AT4G19120" "AT4G19170" "AT4G19390" "AT4G19410" "AT4G19810"
## [708] "AT4G19880" "AT4G20000" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990" "AT4G22710"
## [715] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23680" "AT4G23770" "AT4G23810" "AT4G24540"
## [722] "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780" "AT4G25810" "AT4G25900" "AT4G26270"
## [729] "AT4G26600" "AT4G26670" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27130" "AT4G27700"
## [736] "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G28660" "AT4G28700" "AT4G28730"
## [743] "AT4G28740" "AT4G28780" "AT4G29600" "AT4G30470" "AT4G30610" "AT4G30690" "AT4G30960"
## [750] "AT4G31050" "AT4G31210" "AT4G31390" "AT4G31550" "AT4G31620" "AT4G31870" "AT4G32340"
## [757] "AT4G32770" "AT4G33010" "AT4G33160" "AT4G33560" "AT4G33980" "AT4G33985" "AT4G34550"
## [764] "AT4G34580" "AT4G34610" "AT4G34630" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990"
## [771] "AT4G35090" "AT4G35180" "AT4G35380" "AT4G36580" "AT4G36760" "AT4G36770" "AT4G36950"
## [778] "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37650" "AT4G37800" "AT4G37925"
## [785] "AT4G38000" "AT4G38060" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G38680" "AT4G38960"
## [792] "AT4G38970" "AT4G39230" "AT4G39270" "AT4G39330" "AT4G39470" "AT4G39510" "AT4G39800"
## [799] "AT4G40070" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [806] "AT5G02160" "AT5G02180" "AT5G02230" "AT5G02260" "AT5G02540" "AT5G02780" "AT5G02830"
## [813] "AT5G02950" "AT5G03460" "AT5G03555" "AT5G03760" "AT5G05190" "AT5G05270" "AT5G05410"
## [820] "AT5G05580" "AT5G06550" "AT5G06690" "AT5G06790" "AT5G08380" "AT5G08490" "AT5G08610"
## [827] "AT5G08720" "AT5G08760" "AT5G09500" "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470"
## [834] "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G11210" "AT5G11670" "AT5G12080"
## [841] "AT5G12110" "AT5G12880" "AT5G12930" "AT5G13400" "AT5G13730" "AT5G13770" "AT5G13920"
## [848] "AT5G14350" "AT5G14560" "AT5G14580" "AT5G14610" "AT5G14740" "AT5G15030" "AT5G15600"
## [855] "AT5G15640" "AT5G15840" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340"
## [862] "AT5G16380" "AT5G16530" "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18470" "AT5G18525"
## [869] "AT5G18540" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300" "AT5G19730" "AT5G19850"
## [876] "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380" "AT5G20950" "AT5G21100"
## [883] "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23235" "AT5G23240" "AT5G23575" "AT5G23660"
## [890] "AT5G23730" "AT5G23750" "AT5G23760" "AT5G24030" "AT5G24105" "AT5G24110" "AT5G24120"
## [897] "AT5G24150" "AT5G24165" "AT5G24240" "AT5G24280" "AT5G24380" "AT5G24470" "AT5G24580"
## [904] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25340" "AT5G25590"
## [911] "AT5G25630" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G28500"
## [918] "AT5G33290" "AT5G34780" "AT5G37740" "AT5G38420" "AT5G38430" "AT5G38895" "AT5G39410"
## [925] "AT5G39580" "AT5G39710" "AT5G40240" "AT5G40760" "AT5G41260" "AT5G42900" "AT5G43400"
## [932] "AT5G43630" "AT5G43850" "AT5G44010" "AT5G44190" "AT5G44380" "AT5G44480" "AT5G44490"
## [939] "AT5G44910" "AT5G45800" "AT5G46050" "AT5G46220" "AT5G46580" "AT5G46600" "AT5G46860"
## [946] "AT5G46871" "AT5G47220" "AT5G47360" "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48250"
## [953] "AT5G48430" "AT5G48850" "AT5G48910" "AT5G49015" "AT5G49100" "AT5G49740" "AT5G49900"
## [960] "AT5G50100" "AT5G50200" "AT5G51540" "AT5G51570" "AT5G51720" "AT5G51790" "AT5G52570"
## [967] "AT5G53110" "AT5G53170" "AT5G53200" "AT5G53970" "AT5G54130" "AT5G54190" "AT5G54470"
## [974] "AT5G54585" "AT5G54610" "AT5G54630" "AT5G54930" "AT5G54960" "AT5G55050" "AT5G55090"
## [981] "AT5G55530" "AT5G55570" "AT5G55730" "AT5G55740" "AT5G55790" "AT5G56580" "AT5G56850"
## [988] "AT5G56860" "AT5G56960" "AT5G57030" "AT5G57110" "AT5G57180" "AT5G57220" "AT5G57240"
## [995] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G58770" "AT5G58870"
## [ reached getOption("max.print") -- omitted 59 entries ]
##
## $UporDown$`A1-V1`
## [1] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" "AT1G17665" "AT1G21500" "AT1G55260" "AT1G62170"
## [9] "AT1G62180" "AT1G64500" "AT1G68050" "AT2G21320" "AT2G24762" "AT2G25730" "AT2G40080" "AT2G46830"
## [17] "AT3G07640" "AT3G07650" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [25] "AT4G01130" "AT4G04330" "AT4G12390" "AT4G26670" "AT4G33980" "AT4G37650" "AT5G02150" "AT5G11150"
## [33] "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280" "AT5G39410" "AT5G42900"
## [41] "AT5G47610" "AT5G48250" "AT5G48570" "AT5G54610" "AT5G57110" "AT5G58770" "AT5G59570" "AT5G60100"
## [49] "AT5G61380" "AT5G62140"
##
## $UporDown$`M6-A6`
## [1] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" "AT1G01390" "AT1G01430" "AT1G01480"
## [8] "AT1G01560" "AT1G01660" "AT1G01680" "AT1G01690" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450" "AT1G02470" "AT1G02500" "AT1G02520"
## [22] "AT1G02610" "AT1G02620" "AT1G02740" "AT1G02820" "AT1G02850" "AT1G02920" "AT1G02930"
## [29] "AT1G03020" "AT1G03050" "AT1G03130" "AT1G03310" "AT1G03495" "AT1G03600" "AT1G03610"
## [36] "AT1G03630" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04680"
## [43] "AT1G04770" "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05540"
## [50] "AT1G05570" "AT1G05880" "AT1G06040" "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06460"
## [57] "AT1G06620" "AT1G06680" "AT1G07000" "AT1G07050" "AT1G07280" "AT1G07430" "AT1G07440"
## [64] "AT1G07500" "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08380" "AT1G08450" "AT1G08550"
## [71] "AT1G08860" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020"
## [78] "AT1G10040" "AT1G10150" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10657" "AT1G10760"
## [85] "AT1G10960" "AT1G10990" "AT1G11130" "AT1G11180" "AT1G11260" "AT1G11290" "AT1G11330"
## [92] "AT1G11362" "AT1G11380" "AT1G11905" "AT1G11925" "AT1G12090" "AT1G12160" "AT1G12200"
## [99] "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12450" "AT1G12500" "AT1G12710" "AT1G12730"
## [106] "AT1G12900" "AT1G12940" "AT1G13245" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13470"
## [113] "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550" "AT1G13650" "AT1G13700" "AT1G13830"
## [120] "AT1G13930" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14480" "AT1G14540"
## [127] "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G15040" "AT1G15080" "AT1G15150"
## [134] "AT1G15160" "AT1G15290" "AT1G15415" "AT1G15520" "AT1G15550" "AT1G15690" "AT1G15790"
## [141] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16090"
## [148] "AT1G16150" "AT1G16300" "AT1G16400" "AT1G16410" "AT1G16420" "AT1G16670" "AT1G16720"
## [155] "AT1G16730" "AT1G17100" "AT1G17170" "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500"
## [162] "AT1G17600" "AT1G17615" "AT1G17744" "AT1G17745" "AT1G17750" "AT1G17830" "AT1G17850"
## [169] "AT1G17970" "AT1G18000" "AT1G18010" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18570"
## [176] "AT1G18890" "AT1G18910" "AT1G19020" "AT1G19150" "AT1G19250" "AT1G19450" "AT1G19510"
## [183] "AT1G19540" "AT1G19715" "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20310"
## [190] "AT1G20440" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310" "AT1G21370" "AT1G21390"
## [197] "AT1G21500" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22190"
## [204] "AT1G22220" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22400" "AT1G22403"
## [211] "AT1G22480" "AT1G22490" "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590"
## [218] "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23200" "AT1G23205"
## [225] "AT1G23390" "AT1G23400" "AT1G23480" "AT1G23710" "AT1G23740" "AT1G23840" "AT1G23850"
## [232] "AT1G24095" "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G25400"
## [239] "AT1G25450" "AT1G26130" "AT1G26150" "AT1G26230" "AT1G26380" "AT1G26390" "AT1G26410"
## [246] "AT1G26420" "AT1G26761" "AT1G26800" "AT1G27110" "AT1G27480" "AT1G27770" "AT1G27950"
## [253] "AT1G28010" "AT1G28330" "AT1G28370" "AT1G28480" "AT1G29090" "AT1G29195" "AT1G29280"
## [260] "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530"
## [267] "AT1G29600" "AT1G29640" "AT1G29670" "AT1G29680" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30190" "AT1G30270" "AT1G30420" "AT1G30520" "AT1G30620" "AT1G30814" "AT1G30850"
## [281] "AT1G30900" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330" "AT1G31880" "AT1G31920"
## [288] "AT1G32060" "AT1G32080" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950"
## [295] "AT1G32960" "AT1G33030" "AT1G33110" "AT1G33170" "AT1G33240" "AT1G33420" "AT1G33430"
## [302] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33760" "AT1G33800" "AT1G33950" "AT1G33960"
## [309] "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140" "AT1G35210" "AT1G35230" "AT1G35420"
## [316] "AT1G35710" "AT1G35910" "AT1G36370" "AT1G36622" "AT1G36675" "AT1G37130" "AT1G42550"
## [323] "AT1G42980" "AT1G43670" "AT1G43910" "AT1G44000" "AT1G44130" "AT1G44446" "AT1G45010"
## [330] "AT1G45145" "AT1G47210" "AT1G47370" "AT1G47440" "AT1G47510" "AT1G47580" "AT1G47890"
## [337] "AT1G48030" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010"
## [344] "AT1G49050" "AT1G49200" "AT1G49380" "AT1G49490" "AT1G49650" "AT1G49975" "AT1G49990"
## [351] "AT1G50040" "AT1G50290" "AT1G50400" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [358] "AT1G51640" "AT1G51645" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51805" "AT1G51850"
## [365] "AT1G51860" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52230" "AT1G52315" "AT1G52342"
## [372] "AT1G52540" "AT1G52565" "AT1G52770" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53160"
## [379] "AT1G53620" "AT1G53625" "AT1G54000" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G54960"
## [386] "AT1G55330" "AT1G55370" "AT1G55480" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [393] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G56670"
## [400] "AT1G56720" "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590"
## [407] "AT1G59865" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690" "AT1G60730" "AT1G60800"
## [414] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61300" "AT1G61340"
## [421] "AT1G61370" "AT1G61415" "AT1G61420" "AT1G61520" "AT1G61550" "AT1G61640" "AT1G61795"
## [428] "AT1G61800" "AT1G61810" "AT1G62170" "AT1G62180" "AT1G62320" "AT1G62422" "AT1G62510"
## [435] "AT1G62560" "AT1G62580" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63245" "AT1G63570"
## [442] "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G63930" "AT1G64065" "AT1G64355"
## [449] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900"
## [456] "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65590" "AT1G65690"
## [463] "AT1G65870" "AT1G66090" "AT1G66130" "AT1G66230" "AT1G66250" "AT1G66390" "AT1G66460"
## [470] "AT1G66550" "AT1G66590" "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66840" "AT1G66880"
## [477] "AT1G66930" "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67265" "AT1G67360"
## [484] "AT1G67520" "AT1G67590" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67740" "AT1G67800"
## [491] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67910" "AT1G67920" "AT1G67980" "AT1G68010"
## [498] "AT1G68050" "AT1G68110" "AT1G68190" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68520"
## [505] "AT1G68540" "AT1G68620" "AT1G68670" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G68830"
## [512] "AT1G68890" "AT1G69140" "AT1G69260" "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790"
## [519] "AT1G69840" "AT1G69890" "AT1G69930" "AT1G70090" "AT1G70140" "AT1G70170" "AT1G70290"
## [526] "AT1G70580" "AT1G70690" "AT1G70820" "AT1G70990" "AT1G71000" "AT1G71030" "AT1G71390"
## [533] "AT1G71690" "AT1G72000" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72220" "AT1G72240"
## [540] "AT1G72270" "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72540" "AT1G72600" "AT1G72610"
## [547] "AT1G72630" "AT1G72640" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770"
## [554] "AT1G72870" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010"
## [561] "AT1G73130" "AT1G73325" "AT1G73330" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750"
## [568] "AT1G73805" "AT1G73810" "AT1G73870" "AT1G73890" "AT1G73965" "AT1G74070" "AT1G74080"
## [575] "AT1G74100" "AT1G74200" "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750"
## [582] "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75040" "AT1G75060" "AT1G75170" "AT1G75250"
## [589] "AT1G75460" "AT1G75690" "AT1G75770" "AT1G75830" "AT1G75900" "AT1G75960" "AT1G76040"
## [596] "AT1G76080" "AT1G76100" "AT1G76110" "AT1G76620" "AT1G76690" "AT1G76760" "AT1G76955"
## [603] "AT1G76970" "AT1G76980" "AT1G77090" "AT1G77210" "AT1G77500" "AT1G77630" "AT1G77640"
## [610] "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78000" "AT1G78100" "AT1G78190"
## [617] "AT1G78380" "AT1G78410" "AT1G78450" "AT1G78600" "AT1G78780" "AT1G78990" "AT1G78995"
## [624] "AT1G79330" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79770" "AT1G79780" "AT1G80110"
## [631] "AT1G80280" "AT1G80300" "AT1G80440" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80630"
## [638] "AT1G80830" "AT1G80840" "AT1G80920" "AT2G01180" "AT2G01300" "AT2G01590" "AT2G01755"
## [645] "AT2G01760" "AT2G01818" "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070"
## [652] "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02710" "AT2G02930" "AT2G02950" "AT2G02990"
## [659] "AT2G03090" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03505" "AT2G03550" "AT2G03710"
## [666] "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495"
## [673] "AT2G04515" "AT2G04790" "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940"
## [680] "AT2G05995" "AT2G06520" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13360" "AT2G13790"
## [687] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G15020" "AT2G15090"
## [694] "AT2G15890" "AT2G15970" "AT2G16060" "AT2G16365" "AT2G16630" "AT2G16660" "AT2G16720"
## [701] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17230" "AT2G17440"
## [708] "AT2G17500" "AT2G17695" "AT2G17720" "AT2G17780" "AT2G18000" "AT2G18160" "AT2G18162"
## [715] "AT2G18193" "AT2G18300" "AT2G18560" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G18700"
## [722] "AT2G18940" "AT2G19190" "AT2G19310" "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20250"
## [729] "AT2G20562" "AT2G20670" "AT2G20680" "AT2G21130" "AT2G21140" "AT2G21188" "AT2G21320"
## [736] "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790"
## [743] "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22200" "AT2G22470" "AT2G22810" "AT2G22830"
## [750] "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600" "AT2G23680"
## [757] "AT2G23810" "AT2G23840" "AT2G24110" "AT2G24285" "AT2G24490" "AT2G24550" "AT2G24580"
## [764] "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25190" "AT2G25200" "AT2G25240" "AT2G25260"
## [771] "AT2G25270" "AT2G25440" "AT2G25450" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G25900"
## [778] "AT2G26080" "AT2G26170" "AT2G26300" "AT2G26390" "AT2G26400" "AT2G26480" "AT2G26710"
## [785] "AT2G26870" "AT2G26975" "AT2G27420" "AT2G28120" "AT2G28160" "AT2G28210" "AT2G28305"
## [792] "AT2G28400" "AT2G28570" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29100" "AT2G29170"
## [799] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29400"
## [806] "AT2G29450" "AT2G29460" "AT2G29630" "AT2G29650" "AT2G29670" "AT2G29720" "AT2G29750"
## [813] "AT2G29990" "AT2G30070" "AT2G30080" "AT2G30150" "AT2G30390" "AT2G30395" "AT2G30400"
## [820] "AT2G30420" "AT2G30550" "AT2G30600" "AT2G30615" "AT2G30750" "AT2G30770" "AT2G30930"
## [827] "AT2G31018" "AT2G31020" "AT2G31270" "AT2G31360" "AT2G31585" "AT2G31790" "AT2G31865"
## [834] "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [841] "AT2G32179" "AT2G32180" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32290" "AT2G32430"
## [848] "AT2G32460" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32590"
## [855] "AT2G32640" "AT2G32960" "AT2G33060" "AT2G33110" "AT2G33255" "AT2G33330" "AT2G33580"
## [862] "AT2G33735" "AT2G33855" "AT2G34070" "AT2G34410" "AT2G34420" "AT2G34500" "AT2G34510"
## [869] "AT2G34580" "AT2G34600" "AT2G34610" "AT2G34620" "AT2G34650" "AT2G34760" "AT2G34940"
## [876] "AT2G35130" "AT2G35260" "AT2G35660" "AT2G35710" "AT2G35760" "AT2G35960" "AT2G35980"
## [883] "AT2G36026" "AT2G36050" "AT2G36270" "AT2G36580" "AT2G36670" "AT2G36690" "AT2G36830"
## [890] "AT2G36990" "AT2G37070" "AT2G37100" "AT2G37220" "AT2G37260" "AT2G37440" "AT2G37450"
## [897] "AT2G37530" "AT2G37540" "AT2G37560" "AT2G37585" "AT2G37710" "AT2G37750" "AT2G37790"
## [904] "AT2G37890" "AT2G37950" "AT2G37980" "AT2G38210" "AT2G38230" "AT2G38290" "AT2G38340"
## [911] "AT2G38460" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38540" "AT2G38690" "AT2G38790"
## [918] "AT2G38820" "AT2G38860" "AT2G39110" "AT2G39220" "AT2G39230" "AT2G39320" "AT2G39350"
## [925] "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650" "AT2G39730" "AT2G39880" "AT2G39920"
## [932] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40095" "AT2G40140" "AT2G40150" "AT2G40330"
## [939] "AT2G40540" "AT2G40670" "AT2G40740" "AT2G40840" "AT2G40960" "AT2G41010" "AT2G41050"
## [946] "AT2G41100" "AT2G41342" "AT2G41380" "AT2G41410" "AT2G41430" "AT2G41480" "AT2G41660"
## [953] "AT2G41835" "AT2G41880" "AT2G41990" "AT2G42060" "AT2G42320" "AT2G42350" "AT2G42380"
## [960] "AT2G42485" "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43010" "AT2G43050"
## [967] "AT2G43100" "AT2G43120" "AT2G43140" "AT2G43290" "AT2G43320" "AT2G43550" "AT2G43570"
## [974] "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290" "AT2G44578" "AT2G44600"
## [981] "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45180" "AT2G45220" "AT2G45400" "AT2G45560"
## [988] "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430"
## [995] "AT2G46450" "AT2G46620" "AT2G46680" "AT2G46790" "AT2G47000" "AT2G47130"
## [ reached getOption("max.print") -- omitted 1373 entries ]
##
## $UporDown$`M6-V6`
## [1] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520"
## [8] "AT1G02610" "AT1G02660" "AT1G03010" "AT1G03130" "AT1G03200" "AT1G03600" "AT1G03630"
## [15] "AT1G03680" "AT1G03990" "AT1G04250" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04770"
## [22] "AT1G05100" "AT1G05675" "AT1G05840" "AT1G06040" "AT1G06460" "AT1G06620" "AT1G06680"
## [29] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G07500" "AT1G07570" "AT1G08050" "AT1G08380"
## [36] "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020" "AT1G10150"
## [43] "AT1G10586" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11400" "AT1G12090" "AT1G12160"
## [50] "AT1G12380" "AT1G12540" "AT1G12710" "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13150"
## [57] "AT1G13245" "AT1G13260" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650" "AT1G13830"
## [64] "AT1G13930" "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700"
## [71] "AT1G14740" "AT1G15350" "AT1G15810" "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980"
## [78] "AT1G15990" "AT1G17147" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G17970" "AT1G18000"
## [85] "AT1G18010" "AT1G18020" "AT1G18200" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [92] "AT1G19150" "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680"
## [99] "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20310" "AT1G20340" "AT1G20460" "AT1G21130"
## [106] "AT1G21240" "AT1G21500" "AT1G21550" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22220"
## [113] "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23060" "AT1G23390"
## [120] "AT1G23740" "AT1G23850" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26730"
## [127] "AT1G26770" "AT1G26800" "AT1G26930" "AT1G27330" "AT1G27480" "AT1G28130" "AT1G28370"
## [134] "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29640" "AT1G29670"
## [141] "AT1G29910" "AT1G29920" "AT1G30100" "AT1G30160" "AT1G30380" "AT1G30850" "AT1G31120"
## [148] "AT1G31330" "AT1G31690" "AT1G31770" "AT1G31900" "AT1G32060" "AT1G32080" "AT1G32220"
## [155] "AT1G32870" "AT1G33110" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G33950" "AT1G33960"
## [162] "AT1G34180" "AT1G34420" "AT1G35140" "AT1G36370" "AT1G37130" "AT1G43160" "AT1G43245"
## [169] "AT1G43310" "AT1G43670" "AT1G43910" "AT1G44130" "AT1G44446" "AT1G44575" "AT1G47510"
## [176] "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605" "AT1G49200" "AT1G49520" "AT1G49530"
## [183] "AT1G50590" "AT1G51080" "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51760"
## [190] "AT1G51780" "AT1G51805" "AT1G51860" "AT1G52030" "AT1G52200" "AT1G52220" "AT1G52230"
## [197] "AT1G52342" "AT1G52510" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53163" "AT1G53830"
## [204] "AT1G54010" "AT1G54030" "AT1G54095" "AT1G54410" "AT1G54780" "AT1G54790" "AT1G54820"
## [211] "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55610" "AT1G55670" "AT1G56300" "AT1G56340"
## [218] "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G58030" "AT1G59640"
## [225] "AT1G59860" "AT1G60190" "AT1G60730" "AT1G60800" "AT1G61110" "AT1G61120" "AT1G61190"
## [232] "AT1G61215" "AT1G61260" "AT1G61300" "AT1G61340" "AT1G61520" "AT1G61550" "AT1G62520"
## [239] "AT1G63840" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65690"
## [246] "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66130" "AT1G66230" "AT1G66280" "AT1G66350"
## [253] "AT1G66910" "AT1G66930" "AT1G66960" "AT1G67340" "AT1G67420" "AT1G67590" "AT1G67635"
## [260] "AT1G67740" "AT1G67820" "AT1G67910" "AT1G68050" "AT1G68110" "AT1G68840" "AT1G69140"
## [267] "AT1G69260" "AT1G69360" "AT1G69480" "AT1G69530" "AT1G69570" "AT1G69572" "AT1G69830"
## [274] "AT1G69890" "AT1G70090" "AT1G70420" "AT1G70580" "AT1G70690" "AT1G70790" "AT1G70820"
## [281] "AT1G71000" "AT1G71030" "AT1G71110" "AT1G71390" "AT1G71970" "AT1G72210" "AT1G72410"
## [288] "AT1G72416" "AT1G72430" "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645"
## [295] "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G73470" "AT1G73480" "AT1G73600"
## [302] "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74100" "AT1G74430" "AT1G74710"
## [309] "AT1G74730" "AT1G74940" "AT1G75280" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G75690"
## [316] "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76620" "AT1G76640" "AT1G76690"
## [323] "AT1G76980" "AT1G77210" "AT1G77280" "AT1G77760" "AT1G78000" "AT1G78290" "AT1G78600"
## [330] "AT1G78780" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79270" "AT1G79310" "AT1G79330"
## [337] "AT1G80110" "AT1G80280" "AT1G80440" "AT1G80590" "AT1G80840" "AT1G80920" "AT2G01008"
## [344] "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755" "AT2G01830" "AT2G01870" "AT2G01890"
## [351] "AT2G01918" "AT2G02070" "AT2G02340" "AT2G02450" "AT2G03310" "AT2G03410" "AT2G03420"
## [358] "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G04790"
## [365] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940" "AT2G06255" "AT2G06520"
## [372] "AT2G13360" "AT2G14610" "AT2G14620" "AT2G15090" "AT2G15760" "AT2G15890" "AT2G15970"
## [379] "AT2G16270" "AT2G16365" "AT2G16650" "AT2G16720" "AT2G17230" "AT2G17500" "AT2G17880"
## [386] "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18350" "AT2G18560" "AT2G18660" "AT2G18700"
## [393] "AT2G19310" "AT2G20110" "AT2G20142" "AT2G21130" "AT2G21188" "AT2G21320" "AT2G21330"
## [400] "AT2G21970" "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G22810" "AT2G22830"
## [407] "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240" "AT2G24550" "AT2G24580" "AT2G24645"
## [414] "AT2G25200" "AT2G25690" "AT2G25735" "AT2G25900" "AT2G26150" "AT2G26300" "AT2G26390"
## [421] "AT2G26400" "AT2G26480" "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27228" "AT2G27230"
## [428] "AT2G27300" "AT2G27385" "AT2G27420" "AT2G28110" "AT2G28120" "AT2G28450" "AT2G28570"
## [435] "AT2G28605" "AT2G28900" "AT2G29100" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310"
## [442] "AT2G29360" "AT2G29630" "AT2G29650" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30150"
## [449] "AT2G30420" "AT2G30540" "AT2G30570" "AT2G30615" "AT2G30770" "AT2G30820" "AT2G30830"
## [456] "AT2G31040" "AT2G31180" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32460"
## [463] "AT2G32500" "AT2G32640" "AT2G32930" "AT2G33830" "AT2G34010" "AT2G34070" "AT2G34080"
## [470] "AT2G34410" "AT2G34420" "AT2G34430" "AT2G34620" "AT2G35660" "AT2G35940" "AT2G35945"
## [477] "AT2G35950" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G36640" "AT2G37070" "AT2G37440"
## [484] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37750" "AT2G37950" "AT2G38240" "AT2G38250"
## [491] "AT2G38400" "AT2G38480" "AT2G38490" "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300"
## [498] "AT2G39400" "AT2G39435" "AT2G39730" "AT2G39800" "AT2G39900" "AT2G39980" "AT2G40000"
## [505] "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40200" "AT2G40330" "AT2G40340" "AT2G40460"
## [512] "AT2G40550" "AT2G40610" "AT2G40670" "AT2G40840" "AT2G40960" "AT2G41070" "AT2G41430"
## [519] "AT2G42060" "AT2G42485" "AT2G42530" "AT2G42540" "AT2G42760" "AT2G42890" "AT2G43000"
## [526] "AT2G43010" "AT2G43120" "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680"
## [533] "AT2G44130" "AT2G44490" "AT2G44578" "AT2G44600" "AT2G44840" "AT2G44940" "AT2G45180"
## [540] "AT2G45245" "AT2G45560" "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46040" "AT2G46240"
## [547] "AT2G46400" "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46790" "AT2G46820"
## [554] "AT2G46830" "AT2G46900" "AT2G46970" "AT2G47000" "AT2G47420" "AT2G47770" "AT2G47820"
## [561] "AT2G47920" "AT2G47950" "AT3G01060" "AT3G01440" "AT3G01500" "AT3G01770" "AT3G01810"
## [568] "AT3G02210" "AT3G02550" "AT3G02730" "AT3G02885" "AT3G02990" "AT3G03310" "AT3G03440"
## [575] "AT3G04000" "AT3G04210" "AT3G04300" "AT3G04380" "AT3G04420" "AT3G05500" "AT3G06020"
## [582] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G06490" "AT3G06890" "AT3G07200" "AT3G07310"
## [589] "AT3G07320" "AT3G07350" "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440"
## [596] "AT3G09580" "AT3G09600" "AT3G09960" "AT3G10020" "AT3G10060" "AT3G10520" "AT3G10720"
## [603] "AT3G10815" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G11210" "AT3G11450" "AT3G11480"
## [610] "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13437" "AT3G13470"
## [617] "AT3G13610" "AT3G13730" "AT3G14200" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870"
## [624] "AT3G15536" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G15950" "AT3G16130" "AT3G16250"
## [631] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17390" "AT3G17420"
## [638] "AT3G17510" "AT3G17640" "AT3G17690" "AT3G17840" "AT3G17860" "AT3G18050" "AT3G18080"
## [645] "AT3G18500" "AT3G18710" "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19100"
## [652] "AT3G19615" "AT3G19680" "AT3G19690" "AT3G19970" "AT3G20250" "AT3G21055" "AT3G21080"
## [659] "AT3G21320" "AT3G21500" "AT3G21670" "AT3G21700" "AT3G21780" "AT3G21950" "AT3G22160"
## [666] "AT3G22210" "AT3G22275" "AT3G22290" "AT3G23880" "AT3G24430" "AT3G24515" "AT3G24518"
## [673] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25670" "AT3G25890" "AT3G26180"
## [680] "AT3G26290" "AT3G26440" "AT3G26470" "AT3G26510" "AT3G26740" "AT3G27170" "AT3G27415"
## [687] "AT3G27416" "AT3G27690" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510" "AT3G28580"
## [694] "AT3G29320" "AT3G29330" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G45970" "AT3G46370"
## [701] "AT3G46630" "AT3G46640" "AT3G46658" "AT3G46660" "AT3G46780" "AT3G46970" "AT3G47070"
## [708] "AT3G47420" "AT3G47460" "AT3G47470" "AT3G47480" "AT3G47500" "AT3G47730" "AT3G48090"
## [715] "AT3G48100" "AT3G48115" "AT3G48200" "AT3G48280" "AT3G48420" "AT3G48520" "AT3G48580"
## [722] "AT3G48630" "AT3G48700" "AT3G48720" "AT3G48780" "AT3G49570" "AT3G49580" "AT3G49790"
## [729] "AT3G50060" "AT3G50770" "AT3G50820" "AT3G50840" "AT3G50920" "AT3G50930" "AT3G50960"
## [736] "AT3G51080" "AT3G51090" "AT3G51400" "AT3G51470" "AT3G51670" "AT3G51750" "AT3G51860"
## [743] "AT3G52070" "AT3G52072" "AT3G52180" "AT3G52430" "AT3G52960" "AT3G53210" "AT3G53470"
## [750] "AT3G53800" "AT3G53830" "AT3G54320" "AT3G54366" "AT3G54490" "AT3G54500" "AT3G54890"
## [757] "AT3G55060" "AT3G55240" "AT3G55500" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [764] "AT3G55970" "AT3G56160" "AT3G56170" "AT3G56260" "AT3G56290" "AT3G56940" "AT3G57260"
## [771] "AT3G57380" "AT3G57460" "AT3G57740" "AT3G57950" "AT3G59060" "AT3G59750" "AT3G59870"
## [778] "AT3G59900" "AT3G59930" "AT3G59940" "AT3G60390" "AT3G60420" "AT3G60470" "AT3G60490"
## [785] "AT3G60961" "AT3G60966" "AT3G61060" "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430"
## [792] "AT3G61450" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870" "AT3G61890" "AT3G61930"
## [799] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63010" "AT3G63140" "AT3G63160" "AT3G63380"
## [806] "AT4G00165" "AT4G00700" "AT4G00970" "AT4G01330" "AT4G01430" "AT4G01535" "AT4G01540"
## [813] "AT4G01670" "AT4G02075" "AT4G02360" "AT4G02380" "AT4G02760" "AT4G02770" "AT4G03400"
## [820] "AT4G03460" "AT4G03510" "AT4G04020" "AT4G04223" "AT4G04330" "AT4G04340" "AT4G04490"
## [827] "AT4G04500" "AT4G04510" "AT4G04810" "AT4G04830" "AT4G05010" "AT4G05020" "AT4G05070"
## [834] "AT4G05100" "AT4G05180" "AT4G06534" "AT4G06744" "AT4G08950" "AT4G09010" "AT4G09650"
## [841] "AT4G09750" "AT4G09760" "AT4G09770" "AT4G10120" "AT4G10340" "AT4G10390" "AT4G10500"
## [848] "AT4G11240" "AT4G11300" "AT4G11350" "AT4G11360" "AT4G11521" "AT4G11990" "AT4G12320"
## [855] "AT4G12330" "AT4G12390" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [862] "AT4G12800" "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810"
## [869] "AT4G14270" "AT4G14560" "AT4G14630" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248"
## [876] "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G15975" "AT4G16146" "AT4G16260"
## [883] "AT4G16350" "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17660"
## [890] "AT4G17670" "AT4G17730" "AT4G17810" "AT4G18205" "AT4G18220" "AT4G19170" "AT4G19530"
## [897] "AT4G20320" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445" "AT4G21680" "AT4G21790"
## [904] "AT4G21870" "AT4G21990" "AT4G22070" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23150"
## [911] "AT4G23180" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G23800" "AT4G23810" "AT4G24240"
## [918] "AT4G25290" "AT4G25390" "AT4G25433" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26080"
## [925] "AT4G26120" "AT4G26470" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440"
## [932] "AT4G27590" "AT4G27700" "AT4G27860" "AT4G27870" "AT4G28240" "AT4G28270" "AT4G28703"
## [939] "AT4G28750" "AT4G29190" "AT4G29380" "AT4G29740" "AT4G29930" "AT4G30180" "AT4G30650"
## [946] "AT4G30662" "AT4G32280" "AT4G32340" "AT4G32590" "AT4G32920" "AT4G32980" "AT4G33010"
## [953] "AT4G33150" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34200" "AT4G34220"
## [960] "AT4G34250" "AT4G34630" "AT4G34650" "AT4G34900" "AT4G35600" "AT4G35655" "AT4G35720"
## [967] "AT4G36010" "AT4G36040" "AT4G36430" "AT4G36530" "AT4G36640" "AT4G36780" "AT4G36950"
## [974] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37850" "AT4G37900" "AT4G37925"
## [981] "AT4G38550" "AT4G38552" "AT4G38560" "AT4G38770" "AT4G39030" "AT4G39190" "AT4G39260"
## [988] "AT4G39580" "AT4G39710" "AT4G39730" "AT4G39950" "AT5G01015" "AT5G01520" "AT5G01530"
## [995] "AT5G01840" "AT5G01850" "AT5G02100" "AT5G02160" "AT5G02170" "AT5G02180"
## [ reached getOption("max.print") -- omitted 311 entries ]
##
## $UporDown$`A6-V6`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03020" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04240"
## [15] "AT1G04490" "AT1G05010" "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148"
## [22] "AT1G06360" "AT1G08050" "AT1G08860" "AT1G09950" "AT1G10230" "AT1G11310" "AT1G11330"
## [29] "AT1G11905" "AT1G12210" "AT1G12240" "AT1G12540" "AT1G13110" "AT1G13310" "AT1G13550"
## [36] "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G16370" "AT1G16400" "AT1G16410"
## [43] "AT1G17147" "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19650"
## [50] "AT1G19670" "AT1G19960" "AT1G21250" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400"
## [57] "AT1G22770" "AT1G23200" "AT1G25370" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27100" "AT1G28010" "AT1G29280" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420"
## [71] "AT1G31280" "AT1G31290" "AT1G31690" "AT1G31770" "AT1G32920" "AT1G32940" "AT1G32960"
## [78] "AT1G33800" "AT1G34210" "AT1G35210" "AT1G35230" "AT1G43310" "AT1G43910" "AT1G44900"
## [85] "AT1G49520" "AT1G49530" "AT1G51660" "AT1G51780" "AT1G52200" "AT1G53620" "AT1G53625"
## [92] "AT1G54095" "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990"
## [99] "AT1G59865" "AT1G61140" "AT1G61370" "AT1G63040" "AT1G63570" "AT1G63750" "AT1G63820"
## [106] "AT1G64710" "AT1G65590" "AT1G66280" "AT1G66550" "AT1G66600" "AT1G67635" "AT1G67800"
## [113] "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G69370" "AT1G69480" "AT1G70420"
## [120] "AT1G70690" "AT1G71100" "AT1G72140" "AT1G72180" "AT1G72450" "AT1G72930" "AT1G73210"
## [127] "AT1G73805" "AT1G74430" "AT1G74710" "AT1G74950" "AT1G75540" "AT1G75830" "AT1G76970"
## [134] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G01830" "AT2G02930" "AT2G02990" "AT2G03980"
## [141] "AT2G04040" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G05070" "AT2G06255" "AT2G07687"
## [148] "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480" "AT2G16440" "AT2G18660" "AT2G20110"
## [155] "AT2G21510" "AT2G21790" "AT2G22200" "AT2G22770" "AT2G22930" "AT2G23760" "AT2G23810"
## [162] "AT2G24160" "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25130" "AT2G25737" "AT2G26150"
## [169] "AT2G26240" "AT2G26440" "AT2G26560" "AT2G27228" "AT2G27230" "AT2G28210" "AT2G28570"
## [176] "AT2G28890" "AT2G29720" "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31018" "AT2G31020"
## [183] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34010" "AT2G34070" "AT2G34500" "AT2G35950"
## [190] "AT2G36350" "AT2G36380" "AT2G36470" "AT2G36815" "AT2G36830" "AT2G37180" "AT2G37560"
## [197] "AT2G37940" "AT2G37980" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G38790" "AT2G39110"
## [204] "AT2G39250" "AT2G39800" "AT2G40340" "AT2G40460" "AT2G40550" "AT2G41380" "AT2G41835"
## [211] "AT2G42760" "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130"
## [218] "AT2G47140" "AT2G47600" "AT2G47730" "AT2G47950" "AT3G01180" "AT3G01290" "AT3G02840"
## [225] "AT3G02990" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G06020" "AT3G07195" "AT3G07720"
## [232] "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11470" "AT3G11480" "AT3G11840"
## [239] "AT3G13080" "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G14870" "AT3G15356"
## [246] "AT3G15720" "AT3G16460" "AT3G16510" "AT3G17510" "AT3G17860" "AT3G19010" "AT3G19100"
## [253] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21670" "AT3G21780" "AT3G22370" "AT3G22910"
## [260] "AT3G23530" "AT3G23910" "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600"
## [267] "AT3G26830" "AT3G27170" "AT3G27960" "AT3G28580" "AT3G28930" "AT3G29240" "AT3G29400"
## [274] "AT3G41768" "AT3G43270" "AT3G44350" "AT3G44830" "AT3G45260" "AT3G46520" "AT3G46940"
## [281] "AT3G47540" "AT3G47750" "AT3G47820" "AT3G48090" "AT3G48350" "AT3G48520" "AT3G48640"
## [288] "AT3G48850" "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150"
## [295] "AT3G54820" "AT3G55290" "AT3G55470" "AT3G55500" "AT3G55970" "AT3G56260" "AT3G56710"
## [302] "AT3G56870" "AT3G56891" "AT3G57700" "AT3G57780" "AT3G59710" "AT3G60190" "AT3G60420"
## [309] "AT3G60450" "AT3G60966" "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61760" "AT3G61890"
## [316] "AT3G62700" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895" "AT4G01950" "AT4G02380"
## [323] "AT4G02420" "AT4G02550" "AT4G03060" "AT4G03400" "AT4G05030" "AT4G09300" "AT4G09570"
## [330] "AT4G10060" "AT4G10390" "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G12030"
## [337] "AT4G13180" "AT4G14220" "AT4G14368" "AT4G14610" "AT4G15070" "AT4G15430" "AT4G16740"
## [344] "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660" "AT4G21380" "AT4G21840"
## [351] "AT4G21903" "AT4G22200" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010" "AT4G23170"
## [358] "AT4G23180" "AT4G23250" "AT4G23420" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25433"
## [365] "AT4G25780" "AT4G25900" "AT4G27745" "AT4G27870" "AT4G28390" "AT4G29440" "AT4G30280"
## [372] "AT4G30640" "AT4G32780" "AT4G33925" "AT4G33930" "AT4G34135" "AT4G34390" "AT4G35180"
## [379] "AT4G36010" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370" "AT4G37390" "AT4G37850"
## [386] "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640" "AT5G01840"
## [393] "AT5G01980" "AT5G02260" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650"
## [400] "AT5G07690" "AT5G08335" "AT5G08790" "AT5G10390" "AT5G10440" "AT5G11160" "AT5G12930"
## [407] "AT5G12940" "AT5G13190" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G14760" "AT5G15190"
## [414] "AT5G17380" "AT5G17490" "AT5G17780" "AT5G18470" "AT5G19110" "AT5G20400" "AT5G20960"
## [421] "AT5G21280" "AT5G22060" "AT5G22300" "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205"
## [428] "AT5G24206" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G24910" "AT5G25250" "AT5G25930"
## [435] "AT5G26260" "AT5G26270" "AT5G27350" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990"
## [442] "AT5G39020" "AT5G39040" "AT5G39680" "AT5G41120" "AT5G41180" "AT5G41730" "AT5G41880"
## [449] "AT5G42380" "AT5G42440" "AT5G42650" "AT5G43910" "AT5G44070" "AT5G44350" "AT5G44635"
## [456] "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830" "AT5G52020" "AT5G52120"
## [463] "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52882" "AT5G52910" "AT5G53290"
## [470] "AT5G54300" "AT5G54470" "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860"
## [477] "AT5G55450" "AT5G56960" "AT5G57340" "AT5G57800" "AT5G59720" "AT5G60280" "AT5G60890"
## [484] "AT5G60900" "AT5G61890" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62470" "AT5G62770"
## [491] "AT5G62920" "AT5G63450" "AT5G64170" "AT5G64750" "AT5G64810" "AT5G64870" "AT5G65280"
## [498] "AT5G66052" "AT5G66640" "AT5G66890" "AT5G67150" "AT5G67160" "AT5G67340" "ATCG00020"
## [505] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [512] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [519] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [526] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [533] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $UporDown$`M12-A12`
## [1] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01340"
## [8] "AT1G01370" "AT1G01430" "AT1G01480" "AT1G01520" "AT1G01560" "AT1G01590" "AT1G01610"
## [15] "AT1G01620" "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390"
## [22] "AT1G02405" "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02640" "AT1G02650" "AT1G02660"
## [29] "AT1G02700" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03180" "AT1G03210" "AT1G03290"
## [36] "AT1G03300" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03600" "AT1G03630" "AT1G03660"
## [43] "AT1G03680" "AT1G03850" "AT1G03870" "AT1G03990" "AT1G04040" "AT1G04160" "AT1G04310"
## [50] "AT1G04360" "AT1G04420" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [57] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05310" "AT1G05340" "AT1G05420" "AT1G05570"
## [64] "AT1G05680" "AT1G05835" "AT1G05880" "AT1G06160" "AT1G06180" "AT1G06240" "AT1G06250"
## [71] "AT1G06260" "AT1G06265" "AT1G06460" "AT1G06620" "AT1G06660" "AT1G06680" "AT1G06850"
## [78] "AT1G07000" "AT1G07020" "AT1G07110" "AT1G07320" "AT1G07430" "AT1G07440" "AT1G07476"
## [85] "AT1G07485" "AT1G07490" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620"
## [92] "AT1G07630" "AT1G07880" "AT1G08050" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08630"
## [99] "AT1G08810" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240" "AT1G09340"
## [106] "AT1G09350" "AT1G09440" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09750" "AT1G09794"
## [113] "AT1G09930" "AT1G09932" "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10380" "AT1G10410"
## [120] "AT1G10417" "AT1G10520" "AT1G10585" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10910"
## [127] "AT1G10960" "AT1G11000" "AT1G11100" "AT1G11130" "AT1G11330" "AT1G11362" "AT1G11400"
## [134] "AT1G11480" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11785" "AT1G11860" "AT1G11905"
## [141] "AT1G11925" "AT1G12060" "AT1G12090" "AT1G12250" "AT1G12320" "AT1G12500" "AT1G12540"
## [148] "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150" "AT1G13250" "AT1G13310" "AT1G13330"
## [155] "AT1G13340" "AT1G13380" "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550"
## [162] "AT1G13650" "AT1G13790" "AT1G13990" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14180"
## [169] "AT1G14185" "AT1G14260" "AT1G14270" "AT1G14330" "AT1G14345" "AT1G14440" "AT1G14540"
## [176] "AT1G14687" "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G14900" "AT1G15000"
## [183] "AT1G15010" "AT1G15040" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180" "AT1G15260"
## [190] "AT1G15290" "AT1G15380" "AT1G15405" "AT1G15415" "AT1G15510" "AT1G15520" "AT1G15550"
## [197] "AT1G15670" "AT1G15690" "AT1G15790" "AT1G15800" "AT1G15820" "AT1G15980" "AT1G15990"
## [204] "AT1G16080" "AT1G16150" "AT1G16300" "AT1G16410" "AT1G16420" "AT1G16500" "AT1G16670"
## [211] "AT1G16720" "AT1G17020" "AT1G17100" "AT1G17200" "AT1G17380" "AT1G17490" "AT1G17500"
## [218] "AT1G17600" "AT1G17615" "AT1G17650" "AT1G17745" "AT1G17750" "AT1G17850" "AT1G18000"
## [225] "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18570" "AT1G18620" "AT1G18650"
## [232] "AT1G18735" "AT1G18890" "AT1G19020" "AT1G19150" "AT1G19160" "AT1G19180" "AT1G19200"
## [239] "AT1G19220" "AT1G19230" "AT1G19250" "AT1G19270" "AT1G19350" "AT1G19450" "AT1G19490"
## [246] "AT1G19640" "AT1G20010" "AT1G20020" "AT1G20190" "AT1G20310" "AT1G20340" "AT1G20470"
## [253] "AT1G20740" "AT1G20780" "AT1G20823" "AT1G21000" "AT1G21100" "AT1G21200" "AT1G21210"
## [260] "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21500" "AT1G21520"
## [267] "AT1G21525" "AT1G21680" "AT1G21740" "AT1G21880" "AT1G21910" "AT1G21930" "AT1G22180"
## [274] "AT1G22220" "AT1G22280" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22403" "AT1G22410"
## [281] "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22550" "AT1G22590" "AT1G22840" "AT1G22850"
## [288] "AT1G22985" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23120" "AT1G23200"
## [295] "AT1G23205" "AT1G23340" "AT1G23470" "AT1G23480" "AT1G23530" "AT1G23550" "AT1G23560"
## [302] "AT1G23740" "AT1G23840" "AT1G23850" "AT1G23935" "AT1G23940" "AT1G24140" "AT1G24145"
## [309] "AT1G24147" "AT1G24150" "AT1G24577" "AT1G25240" "AT1G25400" "AT1G25450" "AT1G26130"
## [316] "AT1G26150" "AT1G26200" "AT1G26230" "AT1G26250" "AT1G26290" "AT1G26330" "AT1G26380"
## [323] "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26761" "AT1G26762" "AT1G26810" "AT1G26930"
## [330] "AT1G27020" "AT1G27110" "AT1G27210" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [337] "AT1G27980" "AT1G28190" "AT1G28330" "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29090"
## [344] "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460"
## [351] "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29670" "AT1G29680"
## [358] "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980" "AT1G30020" "AT1G30040"
## [365] "AT1G30135" "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30360" "AT1G30380" "AT1G30473"
## [372] "AT1G30520" "AT1G30620" "AT1G30700" "AT1G30755" "AT1G30760" "AT1G30814" "AT1G30840"
## [379] "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330"
## [386] "AT1G31540" "AT1G31550" "AT1G31710" "AT1G31835" "AT1G31900" "AT1G31950" "AT1G32060"
## [393] "AT1G32080" "AT1G32200" "AT1G32210" "AT1G32220" "AT1G32350" "AT1G32470" "AT1G32540"
## [400] "AT1G32550" "AT1G32560" "AT1G32760" "AT1G32860" "AT1G32870" "AT1G32910" "AT1G32920"
## [407] "AT1G32940" "AT1G32950" "AT1G32960" "AT1G32990" "AT1G33030" "AT1G33240" "AT1G33420"
## [414] "AT1G33430" "AT1G33440" "AT1G33560" "AT1G33600" "AT1G33720" "AT1G33730" "AT1G33770"
## [421] "AT1G33811" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140"
## [428] "AT1G35210" "AT1G35230" "AT1G35420" "AT1G35580" "AT1G35680" "AT1G35710" "AT1G35910"
## [435] "AT1G36622" "AT1G36675" "AT1G42970" "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910"
## [442] "AT1G44130" "AT1G44575" "AT1G45145" "AT1G45163" "AT1G45165" "AT1G45545" "AT1G46480"
## [449] "AT1G47056" "AT1G47440" "AT1G47510" "AT1G47670" "AT1G48000" "AT1G48030" "AT1G48315"
## [456] "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010" "AT1G49050" "AT1G49200"
## [463] "AT1G49230" "AT1G49320" "AT1G49380" "AT1G49450" "AT1G49650" "AT1G49730" "AT1G49900"
## [470] "AT1G50420" "AT1G50450" "AT1G50560" "AT1G50732" "AT1G50740" "AT1G50900" "AT1G50910"
## [477] "AT1G51080" "AT1G51110" "AT1G51130" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780"
## [484] "AT1G51790" "AT1G51800" "AT1G51860" "AT1G51890" "AT1G51940" "AT1G52000" "AT1G52190"
## [491] "AT1G52200" "AT1G52230" "AT1G52240" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690"
## [498] "AT1G52855" "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53230" "AT1G53233" "AT1G53250"
## [505] "AT1G53300" "AT1G53620" "AT1G53625" "AT1G53700" "AT1G53830" "AT1G53920" "AT1G54100"
## [512] "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54730" "AT1G54740" "AT1G54780" "AT1G54820"
## [519] "AT1G54890" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490" "AT1G55610" "AT1G55670"
## [526] "AT1G55790" "AT1G56120" "AT1G56210" "AT1G56240" "AT1G56242" "AT1G56430" "AT1G56470"
## [533] "AT1G56500" "AT1G56550" "AT1G56650" "AT1G56660" "AT1G56710" "AT1G56720" "AT1G57560"
## [540] "AT1G57630" "AT1G57650" "AT1G57943" "AT1G57990" "AT1G58150" "AT1G58370" "AT1G59590"
## [547] "AT1G59640" "AT1G59740" "AT1G59840" "AT1G59950" "AT1G60000" "AT1G60160" "AT1G60190"
## [554] "AT1G60390" "AT1G60420" "AT1G60550" "AT1G60590" "AT1G60600" "AT1G60610" "AT1G60690"
## [561] "AT1G60700" "AT1G60730" "AT1G60800" "AT1G60890" "AT1G60950" "AT1G61065" "AT1G61140"
## [568] "AT1G61160" "AT1G61215" "AT1G61240" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [575] "AT1G61520" "AT1G61550" "AT1G61560" "AT1G61795" "AT1G61800" "AT1G61810" "AT1G61820"
## [582] "AT1G62300" "AT1G62422" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62570" "AT1G62580"
## [589] "AT1G62750" "AT1G62760" "AT1G62840" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63245"
## [596] "AT1G63400" "AT1G63440" "AT1G63460" "AT1G63480" "AT1G63720" "AT1G63740" "AT1G63820"
## [603] "AT1G63840" "AT1G64065" "AT1G64150" "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64610"
## [610] "AT1G64625" "AT1G64660" "AT1G64680" "AT1G64720" "AT1G64770" "AT1G65230" "AT1G65483"
## [617] "AT1G65490" "AT1G65590" "AT1G65610" "AT1G65690" "AT1G65860" "AT1G65900" "AT1G66040"
## [624] "AT1G66090" "AT1G66100" "AT1G66130" "AT1G66140" "AT1G66170" "AT1G66180" "AT1G66280"
## [631] "AT1G66410" "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725"
## [638] "AT1G66810" "AT1G66820" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67040" "AT1G67060"
## [645] "AT1G67070" "AT1G67090" "AT1G67190" "AT1G67195" "AT1G67360" "AT1G67520" "AT1G67590"
## [652] "AT1G67635" "AT1G67650" "AT1G67700" "AT1G67740" "AT1G67750" "AT1G67800" "AT1G67810"
## [659] "AT1G67850" "AT1G67856" "AT1G67970" "AT1G67980" "AT1G68010" "AT1G68190" "AT1G68200"
## [666] "AT1G68238" "AT1G68250" "AT1G68390" "AT1G68400" "AT1G68440" "AT1G68520" "AT1G68530"
## [673] "AT1G68560" "AT1G68620" "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68810" "AT1G68820"
## [680] "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940" "AT1G69050" "AT1G69140" "AT1G69260"
## [687] "AT1G69480" "AT1G69490" "AT1G69520" "AT1G69530" "AT1G69610" "AT1G69720" "AT1G69790"
## [694] "AT1G69840" "AT1G69880" "AT1G69930" "AT1G70220" "AT1G70280" "AT1G70370" "AT1G70410"
## [701] "AT1G70430" "AT1G70460" "AT1G70480" "AT1G70500" "AT1G70640" "AT1G70690" "AT1G70760"
## [708] "AT1G70810" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71100" "AT1G71520" "AT1G71690"
## [715] "AT1G71697" "AT1G71870" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125" "AT1G72140"
## [722] "AT1G72220" "AT1G72240" "AT1G72270" "AT1G72310" "AT1G72330" "AT1G72420" "AT1G72430"
## [729] "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700"
## [736] "AT1G72770" "AT1G72810" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [743] "AT1G72950" "AT1G73010" "AT1G73066" "AT1G73110" "AT1G73260" "AT1G73325" "AT1G73550"
## [750] "AT1G73590" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73965" "AT1G74070" "AT1G74080"
## [757] "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74370" "AT1G74470" "AT1G74670" "AT1G74710"
## [764] "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75170" "AT1G75250" "AT1G75360" "AT1G75388"
## [771] "AT1G75390" "AT1G75500" "AT1G75510" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [778] "AT1G75800" "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470"
## [785] "AT1G76590" "AT1G76610" "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000"
## [792] "AT1G77131" "AT1G77145" "AT1G77210" "AT1G77280" "AT1G77400" "AT1G77490" "AT1G77500"
## [799] "AT1G77630" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78020" "AT1G78060"
## [806] "AT1G78190" "AT1G78260" "AT1G78320" "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78450"
## [813] "AT1G78460" "AT1G78570" "AT1G78780" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G78970"
## [820] "AT1G78995" "AT1G79060" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79760" "AT1G79770"
## [827] "AT1G79900" "AT1G80030" "AT1G80080" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300"
## [834] "AT1G80450" "AT1G80520" "AT1G80530" "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630"
## [841] "AT1G80640" "AT1G80690" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01420" "AT2G01540"
## [848] "AT2G01590" "AT2G01630" "AT2G01650" "AT2G01760" "AT2G01818" "AT2G01990" "AT2G02020"
## [855] "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02390" "AT2G02780"
## [862] "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03090" "AT2G03270" "AT2G03420" "AT2G03750"
## [869] "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100" "AT2G04380" "AT2G04400" "AT2G04430"
## [876] "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04780" "AT2G04790" "AT2G04900" "AT2G05070"
## [883] "AT2G05160" "AT2G05320" "AT2G05630" "AT2G05790" "AT2G05910" "AT2G05914" "AT2G05940"
## [890] "AT2G05995" "AT2G06255" "AT2G06850" "AT2G07687" "AT2G07688" "AT2G07732" "AT2G10940"
## [897] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13790" "AT2G13810" "AT2G13820" "AT2G13960"
## [904] "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620" "AT2G14800" "AT2G14880" "AT2G14890"
## [911] "AT2G15090" "AT2G15400" "AT2G15440" "AT2G15760" "AT2G15860" "AT2G15880" "AT2G16060"
## [918] "AT2G16270" "AT2G16367" "AT2G16530" "AT2G16630" "AT2G16700" "AT2G16710" "AT2G16720"
## [925] "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17230" "AT2G17500" "AT2G17720"
## [932] "AT2G17740" "AT2G17780" "AT2G18000" "AT2G18300" "AT2G18560" "AT2G18660" "AT2G18690"
## [939] "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170" "AT2G19190" "AT2G19620" "AT2G19690"
## [946] "AT2G19710" "AT2G19800" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20180" "AT2G20210"
## [953] "AT2G20290" "AT2G20340" "AT2G20680" "AT2G20825" "AT2G20890" "AT2G21050" "AT2G21080"
## [960] "AT2G21140" "AT2G21188" "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21660"
## [967] "AT2G21780" "AT2G21830" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [974] "AT2G22770" "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23030" "AT2G23100"
## [981] "AT2G23110" "AT2G23130" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23590" "AT2G23600"
## [988] "AT2G23680" "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24060" "AT2G24090" "AT2G24150"
## [995] "AT2G24170" "AT2G24240" "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24580"
## [ reached getOption("max.print") -- omitted 2203 entries ]
##
## $UporDown$`M12-V12`
## [1] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" "AT1G01430" "AT1G01470" "AT1G01480"
## [8] "AT1G01520" "AT1G01560" "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205"
## [15] "AT1G02220" "AT1G02230" "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02640"
## [22] "AT1G02650" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03130" "AT1G03300" "AT1G03457"
## [29] "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04310" "AT1G04490" "AT1G04570" "AT1G04700"
## [36] "AT1G04730" "AT1G04780" "AT1G04980" "AT1G05100" "AT1G05420" "AT1G05680" "AT1G05690"
## [43] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06160" "AT1G06180" "AT1G06570"
## [50] "AT1G06620" "AT1G06760" "AT1G07150" "AT1G07300" "AT1G07430" "AT1G07500" "AT1G07590"
## [57] "AT1G07600" "AT1G07610" "AT1G07670" "AT1G07880" "AT1G08050" "AT1G08300" "AT1G08380"
## [64] "AT1G08560" "AT1G08860" "AT1G08900" "AT1G08920" "AT1G09080" "AT1G09180" "AT1G09200"
## [71] "AT1G09240" "AT1G09350" "AT1G09440" "AT1G09530" "AT1G09750" "AT1G09950" "AT1G10020"
## [78] "AT1G10230" "AT1G10340" "AT1G10380" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [85] "AT1G10586" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G10910" "AT1G10930"
## [92] "AT1G10990" "AT1G11000" "AT1G11185" "AT1G11350" "AT1G11380" "AT1G11400" "AT1G11480"
## [99] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12460" "AT1G12540" "AT1G12700" "AT1G12730"
## [106] "AT1G12860" "AT1G13110" "AT1G13280" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650"
## [113] "AT1G13700" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14070" "AT1G14120"
## [120] "AT1G14180" "AT1G14185" "AT1G14260" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15010"
## [127] "AT1G15100" "AT1G15110" "AT1G15125" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [134] "AT1G15430" "AT1G15520" "AT1G15550" "AT1G15670" "AT1G15890" "AT1G15980" "AT1G15990"
## [141] "AT1G16300" "AT1G16640" "AT1G16850" "AT1G17147" "AT1G17380" "AT1G17420" "AT1G17500"
## [148] "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G17990" "AT1G18000"
## [155] "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550" "AT1G18620"
## [162] "AT1G18650" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19340"
## [169] "AT1G19490" "AT1G19570" "AT1G19610" "AT1G19620" "AT1G19640" "AT1G19650" "AT1G19670"
## [176] "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310" "AT1G20440" "AT1G20450"
## [183] "AT1G20640" "AT1G20970" "AT1G21000" "AT1G21050" "AT1G21120" "AT1G21130" "AT1G21326"
## [190] "AT1G21410" "AT1G21520" "AT1G21525" "AT1G21550" "AT1G21580" "AT1G21910" "AT1G21920"
## [197] "AT1G22220" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490"
## [204] "AT1G22590" "AT1G22740" "AT1G22770" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080"
## [211] "AT1G23120" "AT1G23200" "AT1G23205" "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23550"
## [218] "AT1G23750" "AT1G23850" "AT1G24090" "AT1G24145" "AT1G24147" "AT1G24210" "AT1G24600"
## [225] "AT1G25422" "AT1G25425" "AT1G25440" "AT1G25450" "AT1G25500" "AT1G26150" "AT1G26420"
## [232] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26800" "AT1G26920" "AT1G26930"
## [239] "AT1G26960" "AT1G27020" "AT1G27110" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [246] "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G28360"
## [253] "AT1G28370" "AT1G28400" "AT1G28480" "AT1G28660" "AT1G28670" "AT1G29050" "AT1G29195"
## [260] "AT1G29290" "AT1G29330" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [267] "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320" "AT1G30520" "AT1G30620" "AT1G30814"
## [281] "AT1G30840" "AT1G30850" "AT1G31120" "AT1G31173" "AT1G31290" "AT1G31355" "AT1G31550"
## [288] "AT1G31820" "AT1G31835" "AT1G31900" "AT1G31920" "AT1G31950" "AT1G32560" "AT1G32640"
## [295] "AT1G32730" "AT1G32740" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33055" "AT1G33110"
## [302] "AT1G33240" "AT1G33260" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34180" "AT1G34315"
## [309] "AT1G34420" "AT1G35140" "AT1G35210" "AT1G36940" "AT1G42980" "AT1G43160" "AT1G43245"
## [316] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G44900" "AT1G45145" "AT1G47510"
## [323] "AT1G47890" "AT1G48000" "AT1G48100" "AT1G48260" "AT1G48315" "AT1G48320" "AT1G48370"
## [330] "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49050" "AT1G49200" "AT1G49230" "AT1G49450"
## [337] "AT1G49520" "AT1G50040" "AT1G50180" "AT1G50260" "AT1G50590" "AT1G50640" "AT1G50732"
## [344] "AT1G51140" "AT1G51400" "AT1G51402" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G51850"
## [351] "AT1G51920" "AT1G51940" "AT1G52030" "AT1G52190" "AT1G52230" "AT1G52315" "AT1G52565"
## [358] "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52750" "AT1G52760" "AT1G52770" "AT1G52800"
## [365] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53070" "AT1G53230" "AT1G53233"
## [372] "AT1G53320" "AT1G53410" "AT1G53470" "AT1G53560" "AT1G53620" "AT1G53625" "AT1G53760"
## [379] "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100" "AT1G54120" "AT1G54130" "AT1G54570"
## [386] "AT1G54730" "AT1G54740" "AT1G54820" "AT1G54890" "AT1G55330" "AT1G55370" "AT1G55610"
## [393] "AT1G56220" "AT1G56580" "AT1G56720" "AT1G57560" "AT1G57610" "AT1G57630" "AT1G57650"
## [400] "AT1G57943" "AT1G58225" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740" "AT1G59950"
## [407] "AT1G60190" "AT1G60270" "AT1G60390" "AT1G60830" "AT1G60860" "AT1G61065" "AT1G61110"
## [414] "AT1G61120" "AT1G61140" "AT1G61190" "AT1G61215" "AT1G61240" "AT1G61255" "AT1G61260"
## [421] "AT1G61300" "AT1G61340" "AT1G61500" "AT1G61610" "AT1G61640" "AT1G61795" "AT1G61890"
## [428] "AT1G62520" "AT1G62790" "AT1G62840" "AT1G62910" "AT1G63080" "AT1G63245" "AT1G63260"
## [435] "AT1G63400" "AT1G63530" "AT1G63570" "AT1G63720" "AT1G63880" "AT1G64320" "AT1G64380"
## [442] "AT1G64610" "AT1G64620" "AT1G64625" "AT1G64660" "AT1G64670" "AT1G65295" "AT1G65500"
## [449] "AT1G65610" "AT1G65845" "AT1G66090" "AT1G66170" "AT1G66180" "AT1G66280" "AT1G66550"
## [456] "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G66810" "AT1G66920"
## [463] "AT1G66940" "AT1G67070" "AT1G67420" "AT1G67590" "AT1G68190" "AT1G68200" "AT1G68250"
## [470] "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68520" "AT1G68585" "AT1G68620"
## [477] "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69260" "AT1G69360" "AT1G69480"
## [484] "AT1G69600" "AT1G69610" "AT1G69780" "AT1G69790" "AT1G69840" "AT1G69870" "AT1G69930"
## [491] "AT1G70100" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [498] "AT1G70800" "AT1G70810" "AT1G70940" "AT1G71030" "AT1G71100" "AT1G71690" "AT1G71697"
## [505] "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72120" "AT1G72210" "AT1G72240" "AT1G72270"
## [512] "AT1G72330" "AT1G72416" "AT1G72430" "AT1G72450" "AT1G72520" "AT1G72600" "AT1G72610"
## [519] "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900"
## [526] "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010" "AT1G73110" "AT1G73390" "AT1G73480"
## [533] "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73890" "AT1G73965"
## [540] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74670" "AT1G74710" "AT1G74930" "AT1G74940"
## [547] "AT1G74950" "AT1G75020" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75220" "AT1G75250"
## [554] "AT1G75370" "AT1G75388" "AT1G75390" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580"
## [561] "AT1G75750" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76100" "AT1G76180" "AT1G76240"
## [568] "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650" "AT1G76760" "AT1G76790" "AT1G76960"
## [575] "AT1G76980" "AT1G77131" "AT1G77138" "AT1G77200" "AT1G77210" "AT1G77280" "AT1G77450"
## [582] "AT1G77500" "AT1G77510" "AT1G77640" "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890"
## [589] "AT1G77990" "AT1G78000" "AT1G78070" "AT1G78080" "AT1G78190" "AT1G78210" "AT1G78265"
## [596] "AT1G78270" "AT1G78380" "AT1G78450" "AT1G78570" "AT1G78820" "AT1G78830" "AT1G78860"
## [603] "AT1G78940" "AT1G79110" "AT1G79170" "AT1G79270" "AT1G79400" "AT1G79520" "AT1G79570"
## [610] "AT1G79760" "AT1G79960" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [617] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630" "AT1G80820" "AT1G80840" "AT1G80850"
## [624] "AT2G01340" "AT2G01420" "AT2G01450" "AT2G01630" "AT2G01860" "AT2G01890" "AT2G02020"
## [631] "AT2G02310" "AT2G02340" "AT2G02780" "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03310"
## [638] "AT2G03470" "AT2G03750" "AT2G03760" "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450"
## [645] "AT2G05160" "AT2G05260" "AT2G05632" "AT2G05790" "AT2G05940" "AT2G06050" "AT2G06255"
## [652] "AT2G06850" "AT2G07680" "AT2G07690" "AT2G13550" "AT2G13650" "AT2G13960" "AT2G14050"
## [659] "AT2G14290" "AT2G14660" "AT2G14890" "AT2G15760" "AT2G15880" "AT2G15890" "AT2G16720"
## [666] "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17500" "AT2G17720" "AT2G17740" "AT2G17780"
## [673] "AT2G17880" "AT2G18090" "AT2G18196" "AT2G18300" "AT2G18560" "AT2G18690" "AT2G18890"
## [680] "AT2G18917" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20170"
## [687] "AT2G20180" "AT2G20825" "AT2G20880" "AT2G20950" "AT2G21188" "AT2G21350" "AT2G21640"
## [694] "AT2G21780" "AT2G22200" "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22810"
## [701] "AT2G22830" "AT2G22860" "AT2G22890" "AT2G23030" "AT2G23100" "AT2G23110" "AT2G23290"
## [708] "AT2G23340" "AT2G23450" "AT2G23600" "AT2G23760" "AT2G23810" "AT2G24170" "AT2G24210"
## [715] "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25200"
## [722] "AT2G25240" "AT2G25460" "AT2G25470" "AT2G25625" "AT2G25680" "AT2G25790" "AT2G25900"
## [729] "AT2G26480" "AT2G26530" "AT2G26710" "AT2G26870" "AT2G27310" "AT2G27500" "AT2G27505"
## [736] "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28040" "AT2G28050" "AT2G28120" "AT2G28200"
## [743] "AT2G28400" "AT2G28460" "AT2G28570" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950"
## [750] "AT2G29290" "AT2G29320" "AT2G29410" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470"
## [757] "AT2G29670" "AT2G30020" "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395"
## [764] "AT2G30400" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30540" "AT2G30550" "AT2G30720"
## [771] "AT2G30750" "AT2G30820" "AT2G30830" "AT2G30930" "AT2G31150" "AT2G31180" "AT2G31380"
## [778] "AT2G31751" "AT2G31940" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [785] "AT2G32210" "AT2G32235" "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33020"
## [792] "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33380" "AT2G33480" "AT2G33830" "AT2G34010"
## [799] "AT2G34070" "AT2G34080" "AT2G34500" "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34810"
## [806] "AT2G35170" "AT2G35260" "AT2G35290" "AT2G35550" "AT2G35590" "AT2G35700" "AT2G35710"
## [813] "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36050" "AT2G36080" "AT2G36200"
## [820] "AT2G36380" "AT2G36400" "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854"
## [827] "AT2G36970" "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37440" "AT2G37450" "AT2G37590"
## [834] "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870" "AT2G37950" "AT2G37980" "AT2G38240"
## [841] "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38640" "AT2G38750"
## [848] "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39180" "AT2G39210" "AT2G39250" "AT2G39350"
## [855] "AT2G39430" "AT2G39520" "AT2G39580" "AT2G39725" "AT2G39730" "AT2G39800" "AT2G39980"
## [862] "AT2G40100" "AT2G40140" "AT2G40340" "AT2G40435" "AT2G40530" "AT2G40610" "AT2G40620"
## [869] "AT2G40711" "AT2G40750" "AT2G40850" "AT2G41070" "AT2G41250" "AT2G41410" "AT2G41540"
## [876] "AT2G41550" "AT2G41660" "AT2G41730" "AT2G41820" "AT2G41835" "AT2G41870" "AT2G41940"
## [883] "AT2G42040" "AT2G42150" "AT2G42170" "AT2G42300" "AT2G42320" "AT2G42350" "AT2G42380"
## [890] "AT2G42530" "AT2G42540" "AT2G42560" "AT2G42690" "AT2G42760" "AT2G42940" "AT2G42960"
## [897] "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43150" "AT2G43320" "AT2G43445" "AT2G43535"
## [904] "AT2G43550" "AT2G44370" "AT2G44380" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44630"
## [911] "AT2G44740" "AT2G44810" "AT2G44840" "AT2G44940" "AT2G45180" "AT2G45210" "AT2G45760"
## [918] "AT2G45830" "AT2G45850" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [925] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [932] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47440" "AT2G47480" "AT2G47560"
## [939] "AT2G47670" "AT2G47770" "AT2G47780" "AT2G47920" "AT2G47930" "AT2G47950" "AT3G01280"
## [946] "AT3G01290" "AT3G01480" "AT3G01490" "AT3G01830" "AT3G01840" "AT3G02140" "AT3G02150"
## [953] "AT3G02160" "AT3G02370" "AT3G02510" "AT3G02640" "AT3G02875" "AT3G02990" "AT3G03310"
## [960] "AT3G03440" "AT3G03650" "AT3G03820" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060"
## [967] "AT3G04160" "AT3G04181" "AT3G04300" "AT3G04420" "AT3G04630" "AT3G04720" "AT3G04960"
## [974] "AT3G05320" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05740"
## [981] "AT3G05800" "AT3G05810" "AT3G05900" "AT3G05905" "AT3G06020" "AT3G06030" "AT3G06035"
## [988] "AT3G06070" "AT3G06140" "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06740" "AT3G06890"
## [995] "AT3G07010" "AT3G07210" "AT3G07340" "AT3G07350" "AT3G07460" "AT3G07540"
## [ reached getOption("max.print") -- omitted 1228 entries ]
##
## $UporDown$`A12-V12`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" "AT1G01470" "AT1G01610" "AT1G01620"
## [8] "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02400"
## [15] "AT1G02405" "AT1G02460" "AT1G02470" "AT1G02920" "AT1G02930" "AT1G03020" "AT1G03210"
## [22] "AT1G03850" "AT1G04220" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07150" "AT1G07370"
## [29] "AT1G07610" "AT1G08200" "AT1G08450" "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420"
## [36] "AT1G09500" "AT1G09530" "AT1G09950" "AT1G10070" "AT1G10370" "AT1G10530" "AT1G10560"
## [43] "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12290" "AT1G12420" "AT1G13420"
## [50] "AT1G13520" "AT1G13740" "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G14880"
## [57] "AT1G15080" "AT1G15100" "AT1G15125" "AT1G15170" "AT1G15180" "AT1G15310" "AT1G15380"
## [64] "AT1G15670" "AT1G15890" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17020" "AT1G17147"
## [71] "AT1G17420" "AT1G17460" "AT1G17940" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G19570"
## [78] "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030" "AT1G20070"
## [85] "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G21120" "AT1G21520" "AT1G21525"
## [92] "AT1G21740" "AT1G22550" "AT1G22770" "AT1G25275" "AT1G25422" "AT1G25425" "AT1G25450"
## [99] "AT1G25500" "AT1G26290" "AT1G26380" "AT1G26420" "AT1G26730" "AT1G26770" "AT1G26800"
## [106] "AT1G26920" "AT1G27030" "AT1G27330" "AT1G27350" "AT1G27640" "AT1G27730" "AT1G28010"
## [113] "AT1G28050" "AT1G28360" "AT1G29330" "AT1G30240" "AT1G30420" "AT1G30860" "AT1G31710"
## [120] "AT1G32210" "AT1G32860" "AT1G32910" "AT1G33030" "AT1G33055" "AT1G33950" "AT1G33960"
## [127] "AT1G34210" "AT1G35670" "AT1G36622" "AT1G43160" "AT1G44350" "AT1G44900" "AT1G47890"
## [134] "AT1G48100" "AT1G48260" "AT1G49450" "AT1G49650" "AT1G50520" "AT1G50640" "AT1G51090"
## [141] "AT1G51500" "AT1G51780" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52030" "AT1G52200"
## [148] "AT1G52720" "AT1G53110" "AT1G53170" "AT1G53620" "AT1G54010" "AT1G54030" "AT1G54040"
## [155] "AT1G54095" "AT1G55260" "AT1G55490" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G56580"
## [162] "AT1G58180" "AT1G58225" "AT1G58270" "AT1G58590" "AT1G59740" "AT1G60190" "AT1G60270"
## [169] "AT1G61110" "AT1G61160" "AT1G61340" "AT1G61810" "AT1G61820" "AT1G62440" "AT1G62790"
## [176] "AT1G62975" "AT1G63040" "AT1G63460" "AT1G64150" "AT1G64380" "AT1G64390" "AT1G64620"
## [183] "AT1G64670" "AT1G65470" "AT1G65486" "AT1G65490" "AT1G65845" "AT1G65860" "AT1G66280"
## [190] "AT1G66345" "AT1G66960" "AT1G67420" "AT1G67520" "AT1G67630" "AT1G67810" "AT1G67980"
## [197] "AT1G68350" "AT1G68500" "AT1G68585" "AT1G69140" "AT1G69295" "AT1G69490" "AT1G69530"
## [204] "AT1G69543" "AT1G69600" "AT1G69720" "AT1G69870" "AT1G70300" "AT1G70640" "AT1G70700"
## [211] "AT1G71970" "AT1G72040" "AT1G72060" "AT1G72070" "AT1G72140" "AT1G72180" "AT1G73210"
## [218] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74590" "AT1G74950"
## [225] "AT1G75170" "AT1G75370" "AT1G75580" "AT1G75800" "AT1G75830" "AT1G76610" "AT1G76790"
## [232] "AT1G76960" "AT1G77145" "AT1G77680" "AT1G77920" "AT1G78060" "AT1G78070" "AT1G78080"
## [239] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79170" "AT1G79450" "AT1G79570"
## [246] "AT1G79960" "AT1G80060" "AT1G80120" "AT1G80460" "AT1G80530" "AT1G80580" "AT1G80820"
## [253] "AT1G80840" "AT1G80850" "AT2G01818" "AT2G01830" "AT2G01890" "AT2G02060" "AT2G02350"
## [260] "AT2G02360" "AT2G02930" "AT2G03760" "AT2G04080" "AT2G04515" "AT2G06050" "AT2G06255"
## [267] "AT2G07690" "AT2G14560" "AT2G14610" "AT2G16630" "AT2G17040" "AT2G17450" "AT2G18660"
## [274] "AT2G18969" "AT2G18970" "AT2G19190" "AT2G20880" "AT2G21140" "AT2G21185" "AT2G21187"
## [281] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23170" "AT2G23340"
## [288] "AT2G23760" "AT2G23840" "AT2G24040" "AT2G24210" "AT2G24240" "AT2G24390" "AT2G25130"
## [295] "AT2G25625" "AT2G26560" "AT2G27389" "AT2G27390" "AT2G27510" "AT2G27660" "AT2G27820"
## [302] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28790" "AT2G28940" "AT2G29350"
## [309] "AT2G29440" "AT2G29450" "AT2G29470" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G29950"
## [316] "AT2G30040" "AT2G30360" "AT2G30362" "AT2G30480" "AT2G30540" "AT2G30820" "AT2G30830"
## [323] "AT2G31020" "AT2G31380" "AT2G31730" "AT2G31865" "AT2G32160" "AT2G32235" "AT2G32240"
## [330] "AT2G32460" "AT2G32510" "AT2G32680" "AT2G32990" "AT2G33380" "AT2G33480" "AT2G33520"
## [337] "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960" "AT2G36380" "AT2G36590"
## [344] "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885" "AT2G37040" "AT2G37170"
## [351] "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G37750" "AT2G38530" "AT2G38540"
## [358] "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39320" "AT2G39980" "AT2G40110"
## [365] "AT2G40550" "AT2G40620" "AT2G40880" "AT2G41082" "AT2G41170" "AT2G41250" "AT2G41380"
## [372] "AT2G41440" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [379] "AT2G43000" "AT2G43018" "AT2G43020" "AT2G43150" "AT2G43535" "AT2G43550" "AT2G44370"
## [386] "AT2G44380" "AT2G44578" "AT2G44640" "AT2G44840" "AT2G44980" "AT2G45470" "AT2G45510"
## [393] "AT2G45960" "AT2G46370" "AT2G46380" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [400] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G02820" "AT3G03190"
## [407] "AT3G03470" "AT3G03610" "AT3G03650" "AT3G03780" "AT3G03980" "AT3G04000" "AT3G04010"
## [414] "AT3G04070" "AT3G04630" "AT3G04720" "AT3G05640" "AT3G05740" "AT3G05800" "AT3G05810"
## [421] "AT3G05870" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G07580"
## [428] "AT3G07600" "AT3G07800" "AT3G08030" "AT3G08670" "AT3G09032" "AT3G09940" "AT3G10320"
## [435] "AT3G10985" "AT3G11000" "AT3G11090" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [442] "AT3G12120" "AT3G12145" "AT3G12220" "AT3G12230" "AT3G12920" "AT3G13230" "AT3G13433"
## [449] "AT3G13437" "AT3G13790" "AT3G14067" "AT3G14280" "AT3G14700" "AT3G14740" "AT3G14870"
## [456] "AT3G15210" "AT3G15518" "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450"
## [463] "AT3G16460" "AT3G16500" "AT3G17120" "AT3G17510" "AT3G17860" "AT3G18250" "AT3G18730"
## [470] "AT3G19390" "AT3G19615" "AT3G19660" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G20340"
## [477] "AT3G21670" "AT3G21780" "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22460" "AT3G22560"
## [484] "AT3G23740" "AT3G23810" "AT3G24518" "AT3G24520" "AT3G25700" "AT3G25760" "AT3G25770"
## [491] "AT3G25780" "AT3G26060" "AT3G26210" "AT3G26220" "AT3G26230" "AT3G26440" "AT3G26470"
## [498] "AT3G26500" "AT3G26520" "AT3G27170" "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28540"
## [505] "AT3G28570" "AT3G28600" "AT3G28850" "AT3G28950" "AT3G29240" "AT3G43250" "AT3G43270"
## [512] "AT3G44300" "AT3G44490" "AT3G44870" "AT3G45140" "AT3G45290" "AT3G45330" "AT3G45860"
## [519] "AT3G45930" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47830" "AT3G47836"
## [526] "AT3G47960" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48490" "AT3G48510" "AT3G48520"
## [533] "AT3G48630" "AT3G48640" "AT3G48720" "AT3G49110" "AT3G49130" "AT3G49540" "AT3G49870"
## [540] "AT3G50260" "AT3G50410" "AT3G50550" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G51250"
## [547] "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920" "AT3G52290" "AT3G52630" "AT3G52748"
## [554] "AT3G53150" "AT3G53235" "AT3G53370" "AT3G53420" "AT3G54150" "AT3G54820" "AT3G54830"
## [561] "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260" "AT3G56270" "AT3G56500"
## [568] "AT3G56870" "AT3G56891" "AT3G57020" "AT3G57157" "AT3G57240" "AT3G57550" "AT3G57760"
## [575] "AT3G59050" "AT3G59052" "AT3G59100" "AT3G59710" "AT3G59940" "AT3G59970" "AT3G60220"
## [582] "AT3G60490" "AT3G60540" "AT3G61198" "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61490"
## [589] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62590" "AT3G62600" "AT3G62700" "AT3G62860"
## [596] "AT3G63030" "AT3G63200" "AT4G00360" "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030"
## [603] "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060" "AT4G02110" "AT4G02360" "AT4G02520"
## [610] "AT4G04620" "AT4G04740" "AT4G04840" "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06534"
## [617] "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08770" "AT4G08870" "AT4G09750" "AT4G10290"
## [624] "AT4G10390" "AT4G10860" "AT4G11070" "AT4G11300" "AT4G11320" "AT4G12000" "AT4G12005"
## [631] "AT4G12030" "AT4G12410" "AT4G13770" "AT4G13860" "AT4G13900" "AT4G14020" "AT4G14040"
## [638] "AT4G14440" "AT4G14800" "AT4G15100" "AT4G15210" "AT4G15530" "AT4G15610" "AT4G15770"
## [645] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G17660"
## [652] "AT4G18360" "AT4G18440" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21060"
## [659] "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21610" "AT4G21730" "AT4G21780" "AT4G21790"
## [666] "AT4G22010" "AT4G22520" "AT4G22620" "AT4G23060" "AT4G23260" "AT4G23271" "AT4G23420"
## [673] "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960" "AT4G24972" "AT4G25000" "AT4G25070"
## [680] "AT4G25433" "AT4G25700" "AT4G25830" "AT4G25900" "AT4G26700" "AT4G27350" "AT4G27410"
## [687] "AT4G27520" "AT4G27590" "AT4G27745" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G28310"
## [694] "AT4G28390" "AT4G28405" "AT4G29740" "AT4G30180" "AT4G30210" "AT4G30440" "AT4G30530"
## [701] "AT4G30640" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780" "AT4G32785" "AT4G32870"
## [708] "AT4G33220" "AT4G33355" "AT4G33467" "AT4G33925" "AT4G33970" "AT4G34060" "AT4G34135"
## [715] "AT4G34200" "AT4G34290" "AT4G34650" "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320"
## [722] "AT4G35480" "AT4G35550" "AT4G35560" "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36710"
## [729] "AT4G36780" "AT4G36900" "AT4G37310" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37520"
## [736] "AT4G37760" "AT4G37990" "AT4G38080" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810"
## [743] "AT4G39190" "AT4G39330" "AT4G39350" "AT4G39580" "AT4G39980" "AT5G01210" "AT5G01215"
## [750] "AT5G01550" "AT5G01610" "AT5G01760" "AT5G01840" "AT5G02170" "AT5G02460" "AT5G02502"
## [757] "AT5G02520" "AT5G02690" "AT5G03030" "AT5G03285" "AT5G04180" "AT5G04200" "AT5G04250"
## [764] "AT5G04530" "AT5G04770" "AT5G05270" "AT5G05300" "AT5G05440" "AT5G06310" "AT5G06570"
## [771] "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07650" "AT5G07660" "AT5G07690" "AT5G07700"
## [778] "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08640" "AT5G08760" "AT5G09290"
## [785] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10390" "AT5G10400" "AT5G10440" "AT5G10720"
## [792] "AT5G11920" "AT5G11950" "AT5G12860" "AT5G13220" "AT5G13400" "AT5G14200" "AT5G14420"
## [799] "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240" "AT5G15860"
## [806] "AT5G15870" "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17330" "AT5G17460"
## [813] "AT5G17490" "AT5G17520" "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20400"
## [820] "AT5G20740" "AT5G20960" "AT5G21280" "AT5G22500" "AT5G22740" "AT5G22880" "AT5G23010"
## [827] "AT5G23420" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155" "AT5G24205"
## [834] "AT5G24206" "AT5G24230" "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780"
## [841] "AT5G24910" "AT5G24920" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26260" "AT5G26731"
## [848] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38005"
## [855] "AT5G38120" "AT5G38130" "AT5G38900" "AT5G39320" "AT5G39520" "AT5G39680" "AT5G39950"
## [862] "AT5G40010" "AT5G40240" "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G40690"
## [869] "AT5G40720" "AT5G41120" "AT5G41160" "AT5G41315" "AT5G41590" "AT5G41600" "AT5G41880"
## [876] "AT5G42530" "AT5G42650" "AT5G42830" "AT5G42900" "AT5G43170" "AT5G43910" "AT5G44050"
## [883] "AT5G44210" "AT5G44420" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G45950" "AT5G46230"
## [890] "AT5G46500" "AT5G47220" "AT5G47240" "AT5G47330" "AT5G48180" "AT5G48290" "AT5G49690"
## [897] "AT5G50460" "AT5G52050" "AT5G52310" "AT5G52720" "AT5G52882" "AT5G52910" "AT5G52990"
## [904] "AT5G53200" "AT5G53760" "AT5G53820" "AT5G54300" "AT5G54490" "AT5G54500" "AT5G54840"
## [911] "AT5G55090" "AT5G55180" "AT5G55460" "AT5G55530" "AT5G56050" "AT5G56120" "AT5G56760"
## [918] "AT5G56870" "AT5G56880" "AT5G57010" "AT5G57100" "AT5G57260" "AT5G57550" "AT5G57800"
## [925] "AT5G58480" "AT5G58840" "AT5G58900" "AT5G59030" "AT5G59050" "AT5G59080" "AT5G59090"
## [932] "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59530" "AT5G59662" "AT5G59760" "AT5G59890"
## [939] "AT5G60530" "AT5G60850" "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61000" "AT5G61070"
## [946] "AT5G61160" "AT5G61460" "AT5G61490" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [953] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63135" "AT5G63240"
## [960] "AT5G63450" "AT5G63550" "AT5G64000" "AT5G64170" "AT5G64190" "AT5G64260" "AT5G64280"
## [967] "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280" "AT5G65350" "AT5G65360"
## [974] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66170" "AT5G66590" "AT5G66650" "AT5G67070"
## [981] "AT5G67100" "AT5G67180" "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"
## [988] "AT5G67600"
##
##
## $Up
## $Up$`M1-A1`
## [1] "AT3G21870" "ATCG01310"
##
## $Up$`M1-V1`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G02710" "AT1G02820" "AT1G03050" "AT1G03055" "AT1G03300" "AT1G03360" "AT1G04220"
## [15] "AT1G04250" "AT1G04530" "AT1G04550" "AT1G04660" "AT1G04770" "AT1G05560" "AT1G05562"
## [22] "AT1G05680" "AT1G07010" "AT1G07180" "AT1G07485" "AT1G07490" "AT1G08610" "AT1G09180"
## [29] "AT1G09820" "AT1G09900" "AT1G10460" "AT1G10960" "AT1G12330" "AT1G12370" "AT1G13030"
## [36] "AT1G13080" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150" "AT1G14345"
## [43] "AT1G14840" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15870" "AT1G16350" "AT1G16390"
## [50] "AT1G16730" "AT1G17050" "AT1G18800" "AT1G19140" "AT1G19150" "AT1G19450" "AT1G19700"
## [57] "AT1G21500" "AT1G22590" "AT1G22850" "AT1G23100" "AT1G23410" "AT1G23740" "AT1G24148"
## [64] "AT1G26220" "AT1G26390" "AT1G26761" "AT1G27120" "AT1G27480" "AT1G28010" "AT1G29600"
## [71] "AT1G29660" "AT1G30960" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760" "AT1G32900"
## [78] "AT1G33170" "AT1G33410" "AT1G42550" "AT1G42970" "AT1G44000" "AT1G44446" "AT1G48100"
## [85] "AT1G48480" "AT1G48570" "AT1G49010" "AT1G49430" "AT1G49490" "AT1G49660" "AT1G50840"
## [92] "AT1G51080" "AT1G51100" "AT1G51310" "AT1G52830" "AT1G53090" "AT1G54500" "AT1G55260"
## [99] "AT1G55960" "AT1G58520" "AT1G59700" "AT1G61300" "AT1G62170" "AT1G62180" "AT1G62630"
## [106] "AT1G62720" "AT1G62750" "AT1G62760" "AT1G62960" "AT1G63250" "AT1G64220" "AT1G64500"
## [113] "AT1G64600" "AT1G64670" "AT1G64680" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [120] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65920" "AT1G66130"
## [127] "AT1G66330" "AT1G66540" "AT1G66725" "AT1G66840" "AT1G67590" "AT1G67750" "AT1G68440"
## [134] "AT1G69200" "AT1G70000" "AT1G70250" "AT1G70580" "AT1G71850" "AT1G72040" "AT1G72270"
## [141] "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870" "AT1G73890"
## [148] "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280" "AT1G76240" "AT1G77580"
## [155] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G80270" "AT1G80760"
## [162] "AT2G01280" "AT2G01890" "AT2G02150" "AT2G02230" "AT2G03550" "AT2G04030" "AT2G04039"
## [169] "AT2G04790" "AT2G05160" "AT2G11890" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G17972"
## [176] "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19670" "AT2G20020" "AT2G20585" "AT2G21185"
## [183] "AT2G21187" "AT2G21320" "AT2G21330" "AT2G22240" "AT2G23290" "AT2G23340" "AT2G23430"
## [190] "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440" "AT2G24540" "AT2G24545" "AT2G24580"
## [197] "AT2G24762" "AT2G24820" "AT2G25530" "AT2G25680" "AT2G26080" "AT2G26692" "AT2G27420"
## [204] "AT2G28790" "AT2G29090" "AT2G30100" "AT2G30150" "AT2G30520" "AT2G30760" "AT2G31380"
## [211] "AT2G31750" "AT2G31751" "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33855"
## [218] "AT2G35760" "AT2G35950" "AT2G36000" "AT2G36590" "AT2G36750" "AT2G36800" "AT2G37240"
## [225] "AT2G37460" "AT2G37630" "AT2G37970" "AT2G38750" "AT2G38760" "AT2G39730" "AT2G41050"
## [232] "AT2G41250" "AT2G41290" "AT2G41660" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43650"
## [239] "AT2G43710" "AT2G45340" "AT2G46670" "AT2G46790" "AT2G46810" "AT2G46830" "AT2G47370"
## [246] "AT2G47450" "AT2G47485" "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180"
## [253] "AT3G01440" "AT3G02830" "AT3G04140" "AT3G04950" "AT3G06145" "AT3G06520" "AT3G06750"
## [260] "AT3G06920" "AT3G07310" "AT3G07750" "AT3G07770" "AT3G09160" "AT3G09162" "AT3G09190"
## [267] "AT3G09600" "AT3G09650" "AT3G10040" "AT3G10110" "AT3G10525" "AT3G11090" "AT3G11110"
## [274] "AT3G12320" "AT3G13470" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15540" "AT3G15850"
## [281] "AT3G15990" "AT3G16520" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840" "AT3G18750"
## [288] "AT3G19000" "AT3G19440" "AT3G19450" "AT3G19480" "AT3G21390" "AT3G21460" "AT3G21890"
## [295] "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G23090" "AT3G23210" "AT3G23510"
## [302] "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190" "AT3G24460" "AT3G25030" "AT3G25670"
## [309] "AT3G26570" "AT3G27350" "AT3G27415" "AT3G27416" "AT3G28040" "AT3G28540" "AT3G30460"
## [316] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G46090" "AT3G46900" "AT3G47070" "AT3G47420"
## [323] "AT3G47430" "AT3G48280" "AT3G48560" "AT3G48660" "AT3G48690" "AT3G49240" "AT3G49470"
## [330] "AT3G49570" "AT3G50685" "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52720" "AT3G52920"
## [337] "AT3G53700" "AT3G53830" "AT3G53920" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [344] "AT3G54720" "AT3G54900" "AT3G56080" "AT3G56160" "AT3G56290" "AT3G56300" "AT3G56330"
## [351] "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180" "AT3G57190" "AT3G57400" "AT3G58840"
## [358] "AT3G58990" "AT3G59220" "AT3G59250" "AT3G59400" "AT3G61220" "AT3G61780" "AT3G61880"
## [365] "AT3G63200" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [372] "AT4G01080" "AT4G01535" "AT4G02630" "AT4G02990" "AT4G03600" "AT4G04020" "AT4G04610"
## [379] "AT4G05110" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620" "AT4G11100"
## [386] "AT4G11175" "AT4G12390" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14440"
## [393] "AT4G14690" "AT4G15210" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550" "AT4G15810"
## [400] "AT4G16140" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16980" "AT4G17180" "AT4G17680"
## [407] "AT4G17880" "AT4G17970" "AT4G19170" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990"
## [414] "AT4G23680" "AT4G23770" "AT4G24540" "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780"
## [421] "AT4G26600" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27700" "AT4G28660" "AT4G28700"
## [428] "AT4G28730" "AT4G28740" "AT4G28780" "AT4G30470" "AT4G30610" "AT4G30960" "AT4G31210"
## [435] "AT4G31390" "AT4G31870" "AT4G32770" "AT4G33010" "AT4G33560" "AT4G34550" "AT4G34610"
## [442] "AT4G34630" "AT4G35090" "AT4G36580" "AT4G36950" "AT4G37650" "AT4G37800" "AT4G37925"
## [449] "AT4G38060" "AT4G38680" "AT4G38960" "AT4G38970" "AT4G39330" "AT4G39470" "AT4G39510"
## [456] "AT4G39800" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [463] "AT5G02180" "AT5G02230" "AT5G02540" "AT5G02830" "AT5G02950" "AT5G03555" "AT5G03760"
## [470] "AT5G05270" "AT5G05580" "AT5G06550" "AT5G06790" "AT5G08610" "AT5G08720" "AT5G08760"
## [477] "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470" "AT5G12080" "AT5G12110" "AT5G13400"
## [484] "AT5G13730" "AT5G13770" "AT5G13920" "AT5G14350" "AT5G14580" "AT5G14610" "AT5G14740"
## [491] "AT5G15600" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340" "AT5G16530"
## [498] "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300"
## [505] "AT5G19730" "AT5G19850" "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380"
## [512] "AT5G21100" "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23730" "AT5G23750" "AT5G23760"
## [519] "AT5G24105" "AT5G24120" "AT5G24150" "AT5G24165" "AT5G24280" "AT5G24380" "AT5G24580"
## [526] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25590" "AT5G25630"
## [533] "AT5G28500" "AT5G38420" "AT5G38430" "AT5G39710" "AT5G43400" "AT5G43630" "AT5G43850"
## [540] "AT5G44190" "AT5G44490" "AT5G45800" "AT5G46220" "AT5G46580" "AT5G47220" "AT5G47360"
## [547] "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48850" "AT5G48910" "AT5G49100" "AT5G49740"
## [554] "AT5G50100" "AT5G51540" "AT5G51720" "AT5G52570" "AT5G53170" "AT5G53200" "AT5G53970"
## [561] "AT5G54130" "AT5G54470" "AT5G54585" "AT5G54610" "AT5G54630" "AT5G55570" "AT5G55730"
## [568] "AT5G55740" "AT5G55790" "AT5G56850" "AT5G56860" "AT5G57030" "AT5G57180" "AT5G57240"
## [575] "AT5G58770" "AT5G58870" "AT5G59780" "AT5G61030" "AT5G61130" "AT5G61350" "AT5G61670"
## [582] "AT5G62130" "AT5G62140" "AT5G62370" "AT5G63530" "AT5G63630" "AT5G63700" "AT5G64170"
## [589] "AT5G64710" "AT5G64840" "AT5G64940" "AT5G65380" "AT5G65820" "AT5G66270" "AT5G66740"
## [596] "AT5G66960" "AT5G67030" "AT5G67370" "AT5G67385" "ATCG00330" "ATCG00905" "ATCG00920"
## [603] "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960" "ATCG00970" "ATCG01130" "ATCG01170"
## [610] "ATCG01190" "ATCG01300" "ATCG01310" "ATMG00030" "ATMG00050" "ATMG01130"
##
## $Up$`A1-V1`
## [1] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" "AT1G62170" "AT1G62180" "AT1G64500" "AT2G21320"
## [9] "AT2G24762" "AT2G46830" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [17] "AT4G12390" "AT4G37650" "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280"
## [25] "AT5G47610" "AT5G48570" "AT5G54610" "AT5G58770" "AT5G62140"
##
## $Up$`M6-A6`
## [1] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" "AT1G02610" "AT1G02620" "AT1G02820"
## [8] "AT1G03020" "AT1G03130" "AT1G03310" "AT1G03600" "AT1G03610" "AT1G03630" "AT1G04680"
## [15] "AT1G04770" "AT1G05540" "AT1G06040" "AT1G06460" "AT1G06680" "AT1G07050" "AT1G07280"
## [22] "AT1G07440" "AT1G08380" "AT1G08550" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G10020"
## [29] "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11130" "AT1G11180" "AT1G11260"
## [36] "AT1G11290" "AT1G11362" "AT1G11380" "AT1G11925" "AT1G12090" "AT1G12450" "AT1G12500"
## [43] "AT1G12710" "AT1G12730" "AT1G12900" "AT1G13245" "AT1G13650" "AT1G13700" "AT1G13930"
## [50] "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14700" "AT1G14720" "AT1G15040"
## [57] "AT1G15080" "AT1G15150" "AT1G15160" "AT1G15290" "AT1G15550" "AT1G15690" "AT1G15820"
## [64] "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16400" "AT1G16410"
## [71] "AT1G16720" "AT1G16730" "AT1G17100" "AT1G17850" "AT1G17970" "AT1G18000" "AT1G18010"
## [78] "AT1G18265" "AT1G18330" "AT1G18485" "AT1G19150" "AT1G19450" "AT1G19510" "AT1G19715"
## [85] "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20440" "AT1G21500" "AT1G21910"
## [92] "AT1G22190" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22480" "AT1G22490"
## [99] "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590" "AT1G22630" "AT1G22690"
## [106] "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23205" "AT1G23390" "AT1G23400" "AT1G23480"
## [113] "AT1G23740" "AT1G25400" "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26761" "AT1G26800"
## [120] "AT1G27480" "AT1G27950" "AT1G28010" "AT1G28330" "AT1G29090" "AT1G29280" "AT1G29430"
## [127] "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530" "AT1G29600" "AT1G29670"
## [134] "AT1G29680" "AT1G29715" "AT1G30520" "AT1G31173" "AT1G31330" "AT1G31920" "AT1G32060"
## [141] "AT1G32080" "AT1G33170" "AT1G33240" "AT1G33760" "AT1G35140" "AT1G35420" "AT1G36370"
## [148] "AT1G36675" "AT1G42550" "AT1G43670" "AT1G44000" "AT1G44446" "AT1G45010" "AT1G47370"
## [155] "AT1G47440" "AT1G47580" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49380" "AT1G49490"
## [162] "AT1G49650" "AT1G49975" "AT1G49990" "AT1G50040" "AT1G50290" "AT1G50590" "AT1G50732"
## [169] "AT1G51400" "AT1G51402" "AT1G51805" "AT1G51940" "AT1G52230" "AT1G52342" "AT1G52770"
## [176] "AT1G53160" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55480"
## [183] "AT1G56670" "AT1G56720" "AT1G57590" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690"
## [190] "AT1G60800" "AT1G61300" "AT1G61520" "AT1G61795" "AT1G62170" "AT1G62180" "AT1G62510"
## [197] "AT1G62560" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63570" "AT1G63930" "AT1G64355"
## [204] "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900" "AT1G65230" "AT1G65390" "AT1G65590"
## [211] "AT1G66130" "AT1G66230" "AT1G66840" "AT1G66930" "AT1G67265" "AT1G67590" "AT1G67740"
## [218] "AT1G67910" "AT1G68010" "AT1G68050" "AT1G68190" "AT1G68520" "AT1G68540" "AT1G68670"
## [225] "AT1G68830" "AT1G68890" "AT1G69140" "AT1G69890" "AT1G70090" "AT1G70290" "AT1G70580"
## [232] "AT1G70820" "AT1G71000" "AT1G71030" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72270"
## [239] "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72600" "AT1G72610" "AT1G72630" "AT1G72640"
## [246] "AT1G72645" "AT1G73325" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870"
## [253] "AT1G73890" "AT1G74070" "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75250" "AT1G75460"
## [260] "AT1G75690" "AT1G75770" "AT1G75900" "AT1G75960" "AT1G76080" "AT1G76100" "AT1G76110"
## [267] "AT1G76690" "AT1G76955" "AT1G77090" "AT1G77210" "AT1G77630" "AT1G77640" "AT1G78000"
## [274] "AT1G78100" "AT1G78450" "AT1G78600" "AT1G78990" "AT1G78995" "AT1G79330" "AT1G79770"
## [281] "AT1G79780" "AT1G80440" "AT1G80630" "AT1G80920" "AT2G01590" "AT2G01755" "AT2G01760"
## [288] "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02710" "AT2G02950"
## [295] "AT2G02990" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03710" "AT2G04790"
## [302] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05995" "AT2G06520" "AT2G13360"
## [309] "AT2G15020" "AT2G15090" "AT2G15890" "AT2G15970" "AT2G16365" "AT2G16630" "AT2G16660"
## [316] "AT2G17230" "AT2G17695" "AT2G17780" "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18560"
## [323] "AT2G18700" "AT2G18940" "AT2G19310" "AT2G20250" "AT2G20670" "AT2G20680" "AT2G21130"
## [330] "AT2G21140" "AT2G21320" "AT2G21330" "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22810"
## [337] "AT2G22830" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600"
## [344] "AT2G23840" "AT2G24110" "AT2G24550" "AT2G24580" "AT2G24610" "AT2G25130" "AT2G25200"
## [351] "AT2G25270" "AT2G25450" "AT2G25900" "AT2G26080" "AT2G26710" "AT2G26870" "AT2G26975"
## [358] "AT2G27420" "AT2G28120" "AT2G28305" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29170"
## [365] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29450"
## [372] "AT2G29630" "AT2G29650" "AT2G29670" "AT2G30150" "AT2G30390" "AT2G30420" "AT2G30600"
## [379] "AT2G30615" "AT2G30930" "AT2G31360" "AT2G31790" "AT2G32100" "AT2G32179" "AT2G32180"
## [386] "AT2G32290" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32640"
## [393] "AT2G33060" "AT2G33255" "AT2G33330" "AT2G33735" "AT2G33855" "AT2G34410" "AT2G34420"
## [400] "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34760" "AT2G35130" "AT2G35260" "AT2G35660"
## [407] "AT2G35760" "AT2G35960" "AT2G36050" "AT2G36830" "AT2G36990" "AT2G37220" "AT2G37450"
## [414] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37790" "AT2G37950" "AT2G38210" "AT2G38230"
## [421] "AT2G38460" "AT2G38530" "AT2G38540" "AT2G38820" "AT2G39730" "AT2G39880" "AT2G39920"
## [428] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40150" "AT2G40330" "AT2G40540" "AT2G40840"
## [435] "AT2G40960" "AT2G41050" "AT2G41430" "AT2G41480" "AT2G41990" "AT2G42320" "AT2G42380"
## [442] "AT2G42485" "AT2G43010" "AT2G43100" "AT2G43120" "AT2G43550" "AT2G45180" "AT2G45560"
## [449] "AT2G45850" "AT2G46790" "AT2G47440" "AT2G47485" "AT2G47920" "AT3G01060" "AT3G01440"
## [456] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02730" "AT3G03190" "AT3G03480" "AT3G03780"
## [463] "AT3G04445" "AT3G04550" "AT3G04960" "AT3G05625" "AT3G05936" "AT3G06070" "AT3G06145"
## [470] "AT3G06160" "AT3G06520" "AT3G07310" "AT3G07350" "AT3G07500" "AT3G08000" "AT3G08920"
## [477] "AT3G08940" "AT3G09050" "AT3G09160" "AT3G09162" "AT3G09580" "AT3G10020" "AT3G10520"
## [484] "AT3G11110" "AT3G11700" "AT3G12110" "AT3G12520" "AT3G12685" "AT3G13470" "AT3G13750"
## [491] "AT3G14200" "AT3G14415" "AT3G14850" "AT3G15354" "AT3G15450" "AT3G15500" "AT3G15570"
## [498] "AT3G15720" "AT3G15850" "AT3G16175" "AT3G16250" "AT3G16350" "AT3G17170" "AT3G17350"
## [505] "AT3G17470" "AT3G17640" "AT3G17930" "AT3G18080" "AT3G18710" "AT3G18750" "AT3G18773"
## [512] "AT3G19000" "AT3G19002" "AT3G19480" "AT3G19680" "AT3G19690" "AT3G19700" "AT3G19930"
## [519] "AT3G20350" "AT3G20470" "AT3G20480" "AT3G20640" "AT3G20680" "AT3G20820" "AT3G21352"
## [526] "AT3G21460" "AT3G21755" "AT3G21760" "AT3G21870" "AT3G22150" "AT3G22420" "AT3G22760"
## [533] "AT3G23080" "AT3G23450" "AT3G23810" "AT3G23880" "AT3G24030" "AT3G24430" "AT3G24460"
## [540] "AT3G25410" "AT3G25717" "AT3G25760" "AT3G26280" "AT3G26290" "AT3G26320" "AT3G26490"
## [547] "AT3G26510" "AT3G26570" "AT3G26740" "AT3G27690" "AT3G28070" "AT3G28200" "AT3G28420"
## [554] "AT3G29035" "AT3G29185" "AT3G29320" "AT3G44020" "AT3G44990" "AT3G45230" "AT3G45430"
## [561] "AT3G45780" "AT3G45970" "AT3G46130" "AT3G46370" "AT3G46580" "AT3G46630" "AT3G46640"
## [568] "AT3G46970" "AT3G47070" "AT3G47430" "AT3G47470" "AT3G47500" "AT3G47750" "AT3G48200"
## [575] "AT3G48280" "AT3G48350" "AT3G48420" "AT3G48460" "AT3G48720" "AT3G49470" "AT3G49570"
## [582] "AT3G49580" "AT3G49790" "AT3G49930" "AT3G50060" "AT3G50120" "AT3G50685" "AT3G50840"
## [589] "AT3G51080" "AT3G51400" "AT3G51420" "AT3G51510" "AT3G51600" "AT3G52070" "AT3G52072"
## [596] "AT3G52840" "AT3G53420" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54050" "AT3G54060"
## [603] "AT3G54500" "AT3G54600" "AT3G54830" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630"
## [610] "AT3G55646" "AT3G55760" "AT3G55800" "AT3G56000" "AT3G56160" "AT3G56290" "AT3G56360"
## [617] "AT3G57020" "AT3G57190" "AT3G57765" "AT3G58200" "AT3G58620" "AT3G58990" "AT3G59060"
## [624] "AT3G59120" "AT3G59250" "AT3G59710" "AT3G59940" "AT3G60290" "AT3G60390" "AT3G61060"
## [631] "AT3G61220" "AT3G61870" "AT3G61900" "AT3G62410" "AT3G62550" "AT3G62630" "AT3G62750"
## [638] "AT3G62860" "AT3G62950" "AT3G63160" "AT4G00165" "AT4G00360" "AT4G00370" "AT4G01130"
## [645] "AT4G01330" "AT4G01670" "AT4G01985" "AT4G02630" "AT4G02770" "AT4G03400" "AT4G03510"
## [652] "AT4G04330" "AT4G04340" "AT4G04610" "AT4G04745" "AT4G04810" "AT4G04830" "AT4G04840"
## [659] "AT4G05070" "AT4G06534" "AT4G06536" "AT4G07400" "AT4G09350" "AT4G09650" "AT4G09670"
## [666] "AT4G09760" "AT4G10120" "AT4G10290" "AT4G10340" "AT4G11360" "AT4G11521" "AT4G12310"
## [673] "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12420" "AT4G12730" "AT4G12830" "AT4G12900"
## [680] "AT4G12917" "AT4G12980" "AT4G13340" "AT4G13810" "AT4G13830" "AT4G14270" "AT4G14358"
## [687] "AT4G14540" "AT4G14740" "AT4G15210" "AT4G15450" "AT4G15630" "AT4G15670" "AT4G16563"
## [694] "AT4G16740" "AT4G16980" "AT4G17090" "AT4G17340" "AT4G17360" "AT4G17460" "AT4G17810"
## [701] "AT4G18210" "AT4G18240" "AT4G18980" "AT4G19170" "AT4G19420" "AT4G19530" "AT4G20140"
## [708] "AT4G20260" "AT4G20820" "AT4G20840" "AT4G20860" "AT4G21280" "AT4G21445" "AT4G21870"
## [715] "AT4G21880" "AT4G21990" "AT4G23890" "AT4G24090" "AT4G24130" "AT4G24230" "AT4G24350"
## [722] "AT4G24660" "AT4G24670" "AT4G24700" "AT4G24810" "AT4G25050" "AT4G25080" "AT4G25470"
## [729] "AT4G25480" "AT4G25780" "AT4G25810" "AT4G26150" "AT4G26370" "AT4G26520" "AT4G26530"
## [736] "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27450" "AT4G27700" "AT4G27720" "AT4G27730"
## [743] "AT4G27820" "AT4G28703" "AT4G28740" "AT4G29190" "AT4G29905" "AT4G30250" "AT4G31850"
## [750] "AT4G32340" "AT4G32350" "AT4G32480" "AT4G32770" "AT4G32800" "AT4G32980" "AT4G33000"
## [757] "AT4G33010" "AT4G33220" "AT4G33467" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34090"
## [764] "AT4G34220" "AT4G34250" "AT4G34730" "AT4G34900" "AT4G34950" "AT4G35090" "AT4G35320"
## [771] "AT4G36040" "AT4G36410" "AT4G36530" "AT4G36670" "AT4G37240" "AT4G37260" "AT4G37450"
## [778] "AT4G37610" "AT4G37800" "AT4G37925" "AT4G38400" "AT4G38430" "AT4G38470" "AT4G38770"
## [785] "AT4G38840" "AT4G39330" "AT4G39710" "AT4G39770" "AT5G01015" "AT5G01410" "AT5G01520"
## [792] "AT5G02010" "AT5G02120" "AT5G02160" "AT5G02180" "AT5G02810" "AT5G02830" "AT5G02950"
## [799] "AT5G03285" "AT5G04190" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05740" "AT5G05890"
## [806] "AT5G06220" "AT5G06690" "AT5G06790" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [813] "AT5G08720" "AT5G09440" "AT5G09660" "AT5G09820" "AT5G10150" "AT5G10470" "AT5G10690"
## [820] "AT5G11070" "AT5G11160" "AT5G11410" "AT5G11580" "AT5G11610" "AT5G12050" "AT5G12080"
## [827] "AT5G12110" "AT5G12420" "AT5G12950" "AT5G13630" "AT5G13730" "AT5G14200" "AT5G14360"
## [834] "AT5G14740" "AT5G15350" "AT5G16370" "AT5G16400" "AT5G16810" "AT5G17670" "AT5G18030"
## [841] "AT5G18080" "AT5G18570" "AT5G18670" "AT5G19100" "AT5G19120" "AT5G19140" "AT5G19190"
## [848] "AT5G19730" "AT5G19940" "AT5G20225" "AT5G20250" "AT5G20670" "AT5G20740" "AT5G20935"
## [855] "AT5G21100" "AT5G21222" "AT5G21430" "AT5G21930" "AT5G21940" "AT5G22640" "AT5G22920"
## [862] "AT5G23010" "AT5G23060" "AT5G23210" "AT5G23360" "AT5G23870" "AT5G23920" "AT5G23980"
## [869] "AT5G24000" "AT5G24030" "AT5G24120" "AT5G24150" "AT5G24155" "AT5G24160" "AT5G24460"
## [876] "AT5G24470" "AT5G24490" "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140"
## [883] "AT5G25190" "AT5G25210" "AT5G25240" "AT5G25610" "AT5G25630" "AT5G26220" "AT5G26230"
## [890] "AT5G26820" "AT5G27290" "AT5G27350" "AT5G27390" "AT5G28020" "AT5G28030" "AT5G28500"
## [897] "AT5G28610" "AT5G28640" "AT5G28770" "AT5G35170" "AT5G35790" "AT5G36002" "AT5G38290"
## [904] "AT5G38410" "AT5G38510" "AT5G38520" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860"
## [911] "AT5G40380" "AT5G40890" "AT5G41050" "AT5G41080" "AT5G41590" "AT5G41761" "AT5G41800"
## [918] "AT5G41900" "AT5G42070" "AT5G42200" "AT5G42450" "AT5G43270" "AT5G43750" "AT5G43870"
## [925] "AT5G44005" "AT5G44020" "AT5G44130" "AT5G44190" "AT5G44260" "AT5G44410" "AT5G44600"
## [932] "AT5G45650" "AT5G45680" "AT5G45820" "AT5G45830" "AT5G46220" "AT5G46580" "AT5G46600"
## [939] "AT5G47240" "AT5G47330" "AT5G47370" "AT5G47440" "AT5G47900" "AT5G48545" "AT5G48850"
## [946] "AT5G48910" "AT5G49390" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49740" "AT5G50450"
## [953] "AT5G50950" "AT5G51390" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G51950" "AT5G51970"
## [960] "AT5G52100" "AT5G52120" "AT5G52310" "AT5G52970" "AT5G54145" "AT5G54148" "AT5G54170"
## [967] "AT5G54270" "AT5G54300" "AT5G54585" "AT5G54980" "AT5G55180" "AT5G55740" "AT5G56100"
## [974] "AT5G56544" "AT5G56550" "AT5G56850" "AT5G57100" "AT5G57170" "AT5G57340" "AT5G57550"
## [981] "AT5G57560" "AT5G57630" "AT5G57660" "AT5G57800" "AT5G57880" "AT5G57887" "AT5G58260"
## [988] "AT5G58310" "AT5G58770" "AT5G58900" "AT5G59130" "AT5G59310" "AT5G59730" "AT5G59750"
## [995] "AT5G60400" "AT5G60680" "AT5G61350" "AT5G61590" "AT5G61890" "AT5G62140"
## [ reached getOption("max.print") -- omitted 30 entries ]
##
## $Up$`M6-V6`
## [1] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" "AT1G03130" "AT1G03600" "AT1G03630"
## [8] "AT1G03680" "AT1G04250" "AT1G04770" "AT1G05675" "AT1G06040" "AT1G06460" "AT1G06680"
## [15] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G08380" "AT1G09310" "AT1G09340" "AT1G09350"
## [22] "AT1G10020" "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G12090" "AT1G12710"
## [29] "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13245" "AT1G13260" "AT1G13650" "AT1G13930"
## [36] "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700" "AT1G15810"
## [43] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G17147" "AT1G17970"
## [50] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [57] "AT1G19150" "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20340" "AT1G21130" "AT1G21500"
## [64] "AT1G21550" "AT1G21910" "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770"
## [71] "AT1G23390" "AT1G23740" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26800"
## [78] "AT1G27330" "AT1G27480" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510"
## [85] "AT1G29670" "AT1G29910" "AT1G29920" "AT1G30380" "AT1G31330" "AT1G31690" "AT1G32060"
## [92] "AT1G32080" "AT1G32220" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G35140" "AT1G36370"
## [99] "AT1G43310" "AT1G43670" "AT1G44446" "AT1G44575" "AT1G49200" "AT1G50590" "AT1G51080"
## [106] "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51805" "AT1G52200" "AT1G52220"
## [113] "AT1G52230" "AT1G52342" "AT1G52510" "AT1G53163" "AT1G54410" "AT1G54780" "AT1G54790"
## [120] "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55670" "AT1G56300" "AT1G56340"
## [127] "AT1G57590" "AT1G57990" "AT1G59860" "AT1G60800" "AT1G61190" "AT1G61300" "AT1G61520"
## [134] "AT1G62520" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G66130" "AT1G66230"
## [141] "AT1G66910" "AT1G66930" "AT1G67340" "AT1G67590" "AT1G67740" "AT1G67910" "AT1G68050"
## [148] "AT1G68840" "AT1G69140" "AT1G69570" "AT1G69572" "AT1G69830" "AT1G69890" "AT1G70090"
## [155] "AT1G70420" "AT1G70580" "AT1G70820" "AT1G71000" "AT1G71030" "AT1G71970" "AT1G72416"
## [162] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645" "AT1G73470" "AT1G73480"
## [169] "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74730" "AT1G74940"
## [176] "AT1G75280" "AT1G75690" "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76690"
## [183] "AT1G77210" "AT1G78000" "AT1G78600" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79330"
## [190] "AT1G80440" "AT1G80920" "AT2G01008" "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755"
## [197] "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02450" "AT2G03310" "AT2G03410"
## [204] "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04790" "AT2G04795" "AT2G05070"
## [211] "AT2G05100" "AT2G05160" "AT2G06520" "AT2G13360" "AT2G15090" "AT2G15890" "AT2G15970"
## [218] "AT2G16270" "AT2G16365" "AT2G17230" "AT2G17880" "AT2G18160" "AT2G18162" "AT2G18300"
## [225] "AT2G18350" "AT2G18560" "AT2G18700" "AT2G19310" "AT2G21130" "AT2G21320" "AT2G21330"
## [232] "AT2G21970" "AT2G22810" "AT2G22830" "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240"
## [239] "AT2G24550" "AT2G24580" "AT2G24645" "AT2G25200" "AT2G25735" "AT2G25900" "AT2G26150"
## [246] "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27385" "AT2G27420" "AT2G28120" "AT2G28605"
## [253] "AT2G28900" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29360" "AT2G29630"
## [260] "AT2G29650" "AT2G30150" "AT2G30420" "AT2G30570" "AT2G30615" "AT2G31040" "AT2G31945"
## [267] "AT2G32100" "AT2G32500" "AT2G32640" "AT2G33830" "AT2G34410" "AT2G34420" "AT2G34430"
## [274] "AT2G34620" "AT2G35660" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G37530" "AT2G37540"
## [281] "AT2G37585" "AT2G37950" "AT2G38480" "AT2G39400" "AT2G39730" "AT2G39900" "AT2G39980"
## [288] "AT2G40000" "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40330" "AT2G40340" "AT2G40550"
## [295] "AT2G40610" "AT2G40840" "AT2G40960" "AT2G41430" "AT2G42485" "AT2G42530" "AT2G42540"
## [302] "AT2G43010" "AT2G43120" "AT2G44130" "AT2G44490" "AT2G45180" "AT2G45560" "AT2G45850"
## [309] "AT2G46240" "AT2G46790" "AT2G46820" "AT2G46830" "AT2G47920" "AT3G01060" "AT3G01440"
## [316] "AT3G01500" "AT3G01810" "AT3G02550" "AT3G02730" "AT3G04210" "AT3G04300" "AT3G04380"
## [323] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G07200" "AT3G07310" "AT3G07320" "AT3G07350"
## [330] "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440" "AT3G09580" "AT3G10020"
## [337] "AT3G10060" "AT3G10520" "AT3G10720" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G13437"
## [344] "AT3G13470" "AT3G14200" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G16130" "AT3G16250"
## [351] "AT3G17390" "AT3G17640" "AT3G17840" "AT3G18050" "AT3G18080" "AT3G18500" "AT3G18710"
## [358] "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19615" "AT3G19680" "AT3G19690"
## [365] "AT3G21055" "AT3G21780" "AT3G21950" "AT3G22210" "AT3G23880" "AT3G24430" "AT3G24515"
## [372] "AT3G25670" "AT3G26180" "AT3G26290" "AT3G26510" "AT3G26740" "AT3G27690" "AT3G29320"
## [379] "AT3G29330" "AT3G45970" "AT3G46370" "AT3G46630" "AT3G46640" "AT3G46780" "AT3G46970"
## [386] "AT3G47070" "AT3G47460" "AT3G47470" "AT3G47500" "AT3G48200" "AT3G48280" "AT3G48420"
## [393] "AT3G48720" "AT3G49570" "AT3G49580" "AT3G49790" "AT3G50060" "AT3G50820" "AT3G50840"
## [400] "AT3G50920" "AT3G50960" "AT3G51080" "AT3G51400" "AT3G51470" "AT3G51750" "AT3G52070"
## [407] "AT3G52072" "AT3G52180" "AT3G52960" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54490"
## [414] "AT3G54500" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [421] "AT3G56160" "AT3G56290" "AT3G56940" "AT3G57740" "AT3G59060" "AT3G59870" "AT3G59900"
## [428] "AT3G59940" "AT3G60390" "AT3G61060" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870"
## [435] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63140" "AT3G63160" "AT4G00165" "AT4G00970"
## [442] "AT4G01330" "AT4G01670" "AT4G02075" "AT4G02770" "AT4G03400" "AT4G03510" "AT4G04020"
## [449] "AT4G04330" "AT4G04340" "AT4G04810" "AT4G04830" "AT4G05070" "AT4G05180" "AT4G06534"
## [456] "AT4G08950" "AT4G09010" "AT4G09650" "AT4G09750" "AT4G09760" "AT4G10120" "AT4G10340"
## [463] "AT4G11300" "AT4G11360" "AT4G11521" "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12800"
## [470] "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810" "AT4G14270"
## [477] "AT4G14560" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15975" "AT4G16146"
## [484] "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17810" "AT4G18205"
## [491] "AT4G18220" "AT4G19170" "AT4G19530" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445"
## [498] "AT4G21870" "AT4G21990" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23180" "AT4G23800"
## [505] "AT4G23810" "AT4G24240" "AT4G25290" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26520"
## [512] "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27700" "AT4G28240" "AT4G28270"
## [519] "AT4G28703" "AT4G28750" "AT4G29190" "AT4G30650" "AT4G30662" "AT4G32280" "AT4G32340"
## [526] "AT4G32590" "AT4G32980" "AT4G33010" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980"
## [533] "AT4G34220" "AT4G34250" "AT4G34630" "AT4G34900" "AT4G35655" "AT4G36040" "AT4G36530"
## [540] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37925" "AT4G38550" "AT4G38552"
## [547] "AT4G38770" "AT4G39260" "AT4G39580" "AT4G39710" "AT4G39730" "AT5G01015" "AT5G01520"
## [554] "AT5G01530" "AT5G02160" "AT5G02180" "AT5G02760" "AT5G02810" "AT5G02890" "AT5G03285"
## [561] "AT5G03360" "AT5G05090" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05890" "AT5G06220"
## [568] "AT5G06230" "AT5G06290" "AT5G06690" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [575] "AT5G09660" "AT5G10250" "AT5G10340" "AT5G10690" "AT5G11070" "AT5G11242" "AT5G12110"
## [582] "AT5G12950" "AT5G13630" "AT5G13730" "AT5G16350" "AT5G16370" "AT5G16400" "AT5G16810"
## [589] "AT5G18030" "AT5G18080" "AT5G18660" "AT5G19120" "AT5G19190" "AT5G19940" "AT5G20250"
## [596] "AT5G21430" "AT5G21940" "AT5G22920" "AT5G23210" "AT5G23235" "AT5G23240" "AT5G23360"
## [603] "AT5G24120" "AT5G24155" "AT5G24300" "AT5G24460" "AT5G24470" "AT5G24660" "AT5G24890"
## [610] "AT5G25130" "AT5G25240" "AT5G25280" "AT5G26220" "AT5G26230" "AT5G27290" "AT5G28610"
## [617] "AT5G28630" "AT5G28910" "AT5G35480" "AT5G35970" "AT5G38410" "AT5G38510" "AT5G38980"
## [624] "AT5G38990" "AT5G39020" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860" "AT5G40500"
## [631] "AT5G41050" "AT5G41761" "AT5G42200" "AT5G43440" "AT5G43750" "AT5G44005" "AT5G44060"
## [638] "AT5G44070" "AT5G44260" "AT5G44410" "AT5G44680" "AT5G45670" "AT5G45680" "AT5G45820"
## [645] "AT5G45830" "AT5G46110" "AT5G46220" "AT5G46600" "AT5G47370" "AT5G48545" "AT5G48570"
## [652] "AT5G48850" "AT5G48880" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49900" "AT5G50450"
## [659] "AT5G50740" "AT5G51460" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G52100" "AT5G54145"
## [666] "AT5G54148" "AT5G54270" "AT5G54280" "AT5G54585" "AT5G54770" "AT5G55740" "AT5G56010"
## [673] "AT5G56100" "AT5G56544" "AT5G56550" "AT5G57170" "AT5G57560" "AT5G57660" "AT5G58310"
## [680] "AT5G59130" "AT5G60100" "AT5G60270" "AT5G60400" "AT5G60680" "AT5G61160" "AT5G61270"
## [687] "AT5G61350" "AT5G61440" "AT5G61590" "AT5G61600" "AT5G62140" "AT5G62280" "AT5G62430"
## [694] "AT5G62720" "AT5G62730" "AT5G63140" "AT5G63380" "AT5G63700" "AT5G63780" "AT5G63820"
## [701] "AT5G64040" "AT5G64170" "AT5G64190" "AT5G65207" "AT5G66520" "AT5G66570" "AT5G66580"
## [708] "AT5G67370" "AT5G67420" "ATCG00010" "ATCG00020" "ATCG00140" "ATCG00270" "ATCG00280"
## [715] "ATCG00330" "ATCG00340" "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00680" "ATCG00710"
## [722] "ATCG00720" "ATCG00730" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960"
## [729] "ATCG00970" "ATCG01060" "ATCG01160" "ATCG01170" "ATCG01180" "ATCG01190" "ATCG01200"
## [736] "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00030"
##
## $Up$`A6-V6`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04490" "AT1G05010"
## [15] "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148" "AT1G06360" "AT1G08050"
## [22] "AT1G08860" "AT1G10230" "AT1G11310" "AT1G11330" "AT1G11905" "AT1G12210" "AT1G13110"
## [29] "AT1G13310" "AT1G13550" "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G17147"
## [36] "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19960" "AT1G21250"
## [43] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400" "AT1G22770" "AT1G23200" "AT1G25370"
## [50] "AT1G27100" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420" "AT1G31280" "AT1G31290"
## [57] "AT1G31690" "AT1G32920" "AT1G32940" "AT1G32960" "AT1G33800" "AT1G35210" "AT1G35230"
## [64] "AT1G43310" "AT1G43910" "AT1G44900" "AT1G51660" "AT1G52200" "AT1G53620" "AT1G53625"
## [71] "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990" "AT1G59865"
## [78] "AT1G61140" "AT1G61370" "AT1G63750" "AT1G63820" "AT1G64710" "AT1G66550" "AT1G66600"
## [85] "AT1G67635" "AT1G67800" "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G70420"
## [92] "AT1G70690" "AT1G71100" "AT1G72930" "AT1G73805" "AT1G74710" "AT1G75830" "AT1G76970"
## [99] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G02930" "AT2G04040" "AT2G04070" "AT2G04430"
## [106] "AT2G04450" "AT2G05070" "AT2G07687" "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480"
## [113] "AT2G16440" "AT2G18660" "AT2G20110" "AT2G21510" "AT2G21790" "AT2G23810" "AT2G24160"
## [120] "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25737" "AT2G26150" "AT2G26240" "AT2G26440"
## [127] "AT2G26560" "AT2G28210" "AT2G28570" "AT2G28890" "AT2G29720" "AT2G31018" "AT2G31020"
## [134] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34500" "AT2G36470" "AT2G37560" "AT2G37940"
## [141] "AT2G37980" "AT2G38790" "AT2G39110" "AT2G40340" "AT2G40550" "AT2G41380" "AT2G41835"
## [148] "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130" "AT2G47140"
## [155] "AT2G47730" "AT3G01290" "AT3G02840" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G07195"
## [162] "AT3G07720" "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11840" "AT3G13080"
## [169] "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G15356" "AT3G16510" "AT3G19010"
## [176] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21780" "AT3G22370" "AT3G22910" "AT3G23530"
## [183] "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600" "AT3G26830" "AT3G28580"
## [190] "AT3G28930" "AT3G29240" "AT3G29400" "AT3G41768" "AT3G44350" "AT3G44830" "AT3G45260"
## [197] "AT3G46520" "AT3G46940" "AT3G47540" "AT3G47820" "AT3G48090" "AT3G48640" "AT3G48850"
## [204] "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150" "AT3G55470"
## [211] "AT3G55500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57700" "AT3G60190" "AT3G60420"
## [218] "AT3G60450" "AT3G60966" "AT3G61760" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895"
## [225] "AT4G01950" "AT4G02380" "AT4G02420" "AT4G02550" "AT4G05030" "AT4G09300" "AT4G09570"
## [232] "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G13180" "AT4G14220" "AT4G14368"
## [239] "AT4G14610" "AT4G15070" "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660"
## [246] "AT4G21380" "AT4G21840" "AT4G21903" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010"
## [253] "AT4G23170" "AT4G23180" "AT4G23250" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25900"
## [260] "AT4G27745" "AT4G28390" "AT4G29440" "AT4G30280" "AT4G30640" "AT4G33925" "AT4G33930"
## [267] "AT4G34135" "AT4G34390" "AT4G35180" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370"
## [274] "AT4G37390" "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640"
## [281] "AT5G01980" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650" "AT5G08335"
## [288] "AT5G08790" "AT5G10390" "AT5G10440" "AT5G12930" "AT5G12940" "AT5G13190" "AT5G14760"
## [295] "AT5G17380" "AT5G17780" "AT5G18470" "AT5G20400" "AT5G20960" "AT5G22060" "AT5G22300"
## [302] "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205" "AT5G24206" "AT5G24910" "AT5G25250"
## [309] "AT5G25930" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990" "AT5G39020" "AT5G39040"
## [316] "AT5G39680" "AT5G41180" "AT5G41730" "AT5G41880" "AT5G42380" "AT5G42440" "AT5G43910"
## [323] "AT5G44070" "AT5G44635" "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830"
## [330] "AT5G52020" "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52910" "AT5G54470"
## [337] "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860" "AT5G55450" "AT5G56960"
## [344] "AT5G59720" "AT5G60280" "AT5G60900" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62770"
## [351] "AT5G64170" "AT5G64810" "AT5G64870" "AT5G66640" "AT5G66890" "AT5G67340" "ATCG00020"
## [358] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [365] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [372] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [379] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [386] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $Up$`M12-A12`
## [1] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01430" "AT1G01590" "AT1G01610"
## [8] "AT1G01620" "AT1G02640" "AT1G02650" "AT1G02700" "AT1G02710" "AT1G03300" "AT1G03600"
## [15] "AT1G03630" "AT1G03680" "AT1G03870" "AT1G04040" "AT1G04160" "AT1G04360" "AT1G04420"
## [22] "AT1G05310" "AT1G05420" "AT1G06160" "AT1G06240" "AT1G06250" "AT1G06260" "AT1G06265"
## [29] "AT1G06460" "AT1G06680" "AT1G06850" "AT1G07110" "AT1G07320" "AT1G07440" "AT1G07485"
## [36] "AT1G07490" "AT1G07880" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08810" "AT1G09340"
## [43] "AT1G09440" "AT1G09750" "AT1G10380" "AT1G10657" "AT1G10910" "AT1G10960" "AT1G11000"
## [50] "AT1G11130" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11860" "AT1G11925" "AT1G12060"
## [57] "AT1G12090" "AT1G12250" "AT1G12500" "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150"
## [64] "AT1G13250" "AT1G13380" "AT1G13650" "AT1G13790" "AT1G14030" "AT1G14150" "AT1G14160"
## [71] "AT1G14180" "AT1G14185" "AT1G14270" "AT1G14345" "AT1G14440" "AT1G14687" "AT1G14700"
## [78] "AT1G14720" "AT1G14900" "AT1G15000" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180"
## [85] "AT1G15260" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15690" "AT1G15820" "AT1G15980"
## [92] "AT1G15990" "AT1G16080" "AT1G16410" "AT1G16720" "AT1G17100" "AT1G17200" "AT1G17650"
## [99] "AT1G17850" "AT1G18000" "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18620"
## [106] "AT1G18650" "AT1G18735" "AT1G19150" "AT1G19220" "AT1G19350" "AT1G19450" "AT1G20010"
## [113] "AT1G20020" "AT1G20190" "AT1G20340" "AT1G20470" "AT1G20823" "AT1G21100" "AT1G21500"
## [120] "AT1G21680" "AT1G21880" "AT1G21910" "AT1G22330" "AT1G22370" "AT1G22550" "AT1G22590"
## [127] "AT1G22850" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205" "AT1G23340" "AT1G23470"
## [134] "AT1G23480" "AT1G23530" "AT1G23740" "AT1G23935" "AT1G23940" "AT1G24577" "AT1G25240"
## [141] "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26250" "AT1G26761" "AT1G26810" "AT1G27020"
## [148] "AT1G27210" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G29090" "AT1G29430"
## [155] "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29660"
## [162] "AT1G29670" "AT1G29680" "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980"
## [169] "AT1G30020" "AT1G30360" "AT1G30380" "AT1G30520" "AT1G30760" "AT1G30840" "AT1G31173"
## [176] "AT1G31330" "AT1G31710" "AT1G31835" "AT1G31950" "AT1G32060" "AT1G32080" "AT1G32200"
## [183] "AT1G32220" "AT1G32470" "AT1G32540" "AT1G32550" "AT1G32760" "AT1G32860" "AT1G32990"
## [190] "AT1G33240" "AT1G33440" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G35140" "AT1G35420"
## [197] "AT1G35680" "AT1G36675" "AT1G42970" "AT1G44575" "AT1G45163" "AT1G45165" "AT1G45545"
## [204] "AT1G46480" "AT1G47440" "AT1G47670" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49230"
## [211] "AT1G49320" "AT1G49380" "AT1G49650" "AT1G49730" "AT1G50450" "AT1G50732" "AT1G50900"
## [218] "AT1G50910" "AT1G51080" "AT1G51110" "AT1G51940" "AT1G52000" "AT1G52190" "AT1G52230"
## [225] "AT1G52240" "AT1G53230" "AT1G53233" "AT1G53250" "AT1G53300" "AT1G53700" "AT1G54730"
## [232] "AT1G54740" "AT1G54780" "AT1G54820" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490"
## [239] "AT1G55670" "AT1G56210" "AT1G56430" "AT1G56500" "AT1G56710" "AT1G56720" "AT1G57943"
## [246] "AT1G58150" "AT1G58370" "AT1G59840" "AT1G60000" "AT1G60160" "AT1G60390" "AT1G60550"
## [253] "AT1G60590" "AT1G60600" "AT1G60690" "AT1G60700" "AT1G60800" "AT1G60950" "AT1G61240"
## [260] "AT1G61520" "AT1G61550" "AT1G61795" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62750"
## [267] "AT1G62760" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63400" "AT1G63480" "AT1G64150"
## [274] "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64625" "AT1G64680" "AT1G64720" "AT1G64770"
## [281] "AT1G65230" "AT1G65590" "AT1G65860" "AT1G65900" "AT1G66100" "AT1G66130" "AT1G66140"
## [288] "AT1G66180" "AT1G66810" "AT1G66820" "AT1G67040" "AT1G67090" "AT1G67590" "AT1G67700"
## [295] "AT1G67740" "AT1G67750" "AT1G68010" "AT1G68190" "AT1G68238" "AT1G68400" "AT1G68520"
## [302] "AT1G68530" "AT1G68560" "AT1G68810" "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940"
## [309] "AT1G69140" "AT1G69530" "AT1G70280" "AT1G70370" "AT1G70410" "AT1G70430" "AT1G70460"
## [316] "AT1G70500" "AT1G70760" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71870" "AT1G72140"
## [323] "AT1G72270" "AT1G72310" "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72810"
## [330] "AT1G73066" "AT1G73110" "AT1G73325" "AT1G73590" "AT1G73830" "AT1G74070" "AT1G74370"
## [337] "AT1G74470" "AT1G74670" "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75250" "AT1G75360"
## [344] "AT1G75388" "AT1G75390" "AT1G75500" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [351] "AT1G75800" "AT1G76610" "AT1G77131" "AT1G77210" "AT1G77400" "AT1G77490" "AT1G77630"
## [358] "AT1G78020" "AT1G78060" "AT1G78320" "AT1G78450" "AT1G78460" "AT1G78820" "AT1G78830"
## [365] "AT1G78860" "AT1G78970" "AT1G78995" "AT1G79060" "AT1G79760" "AT1G79770" "AT1G80030"
## [372] "AT1G80080" "AT1G80520" "AT1G80530" "AT1G80630" "AT1G80640" "AT1G80690" "AT2G01420"
## [379] "AT2G01590" "AT2G01630" "AT2G01760" "AT2G01990" "AT2G02020" "AT2G02780" "AT2G02950"
## [386] "AT2G02980" "AT2G03090" "AT2G03420" "AT2G03750" "AT2G04380" "AT2G04780" "AT2G04790"
## [393] "AT2G05070" "AT2G05160" "AT2G05790" "AT2G05914" "AT2G05995" "AT2G06850" "AT2G10940"
## [400] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13820" "AT2G14800" "AT2G14880" "AT2G14890"
## [407] "AT2G15090" "AT2G15440" "AT2G15880" "AT2G16270" "AT2G16630" "AT2G17230" "AT2G17740"
## [414] "AT2G17780" "AT2G18300" "AT2G18560" "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170"
## [421] "AT2G19620" "AT2G19930" "AT2G20180" "AT2G20210" "AT2G20290" "AT2G20340" "AT2G20680"
## [428] "AT2G20890" "AT2G21050" "AT2G21080" "AT2G21140" "AT2G21330" "AT2G21660" "AT2G21830"
## [435] "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23590"
## [442] "AT2G23600" "AT2G24060" "AT2G24090" "AT2G24150" "AT2G24170" "AT2G24280" "AT2G24350"
## [449] "AT2G24580" "AT2G24610" "AT2G24762" "AT2G25270" "AT2G25470" "AT2G25790" "AT2G25840"
## [456] "AT2G25900" "AT2G26080" "AT2G26250" "AT2G26330" "AT2G26640" "AT2G26710" "AT2G26870"
## [463] "AT2G26900" "AT2G26910" "AT2G27040" "AT2G27060" "AT2G27130" "AT2G27190" "AT2G27385"
## [470] "AT2G27810" "AT2G28000" "AT2G28040" "AT2G28050" "AT2G28140" "AT2G28315" "AT2G28460"
## [477] "AT2G28790" "AT2G28810" "AT2G28870" "AT2G28930" "AT2G28950" "AT2G29050" "AT2G29290"
## [484] "AT2G29310" "AT2G29320" "AT2G29550" "AT2G29630" "AT2G30170" "AT2G30420" "AT2G30760"
## [491] "AT2G30766" "AT2G30790" "AT2G30820" "AT2G30830" "AT2G31170" "AT2G31790" "AT2G31902"
## [498] "AT2G32100" "AT2G32179" "AT2G32180" "AT2G32560" "AT2G32640" "AT2G33060" "AT2G33250"
## [505] "AT2G33330" "AT2G33570" "AT2G33735" "AT2G33860" "AT2G34060" "AT2G34170" "AT2G34180"
## [512] "AT2G34190" "AT2G34420" "AT2G34430" "AT2G34490" "AT2G34510" "AT2G34620" "AT2G34680"
## [519] "AT2G34930" "AT2G34980" "AT2G35130" "AT2G35190" "AT2G35260" "AT2G35500" "AT2G35590"
## [526] "AT2G35637" "AT2G35640" "AT2G35859" "AT2G35860" "AT2G35960" "AT2G36000" "AT2G36050"
## [533] "AT2G36110" "AT2G36200" "AT2G36570" "AT2G36815" "AT2G36830" "AT2G36990" "AT2G37090"
## [540] "AT2G37170" "AT2G37180" "AT2G37220" "AT2G37450" "AT2G37640" "AT2G37950" "AT2G38050"
## [547] "AT2G38080" "AT2G38120" "AT2G38170" "AT2G38210" "AT2G38460" "AT2G38530" "AT2G38540"
## [554] "AT2G39130" "AT2G39140" "AT2G39190" "AT2G39430" "AT2G39470" "AT2G39700" "AT2G39730"
## [561] "AT2G39870" "AT2G40008" "AT2G40480" "AT2G40540" "AT2G40610" "AT2G40690" "AT2G40815"
## [568] "AT2G41290" "AT2G41480" "AT2G41550" "AT2G41720" "AT2G41820" "AT2G41990" "AT2G42170"
## [575] "AT2G42290" "AT2G42300" "AT2G42320" "AT2G42380" "AT2G42870" "AT2G42940" "AT2G42980"
## [582] "AT2G43100" "AT2G43120" "AT2G43360" "AT2G43445" "AT2G44230" "AT2G44740" "AT2G44920"
## [589] "AT2G45050" "AT2G45180" "AT2G45340" "AT2G45470" "AT2G45560" "AT2G45850" "AT2G45870"
## [596] "AT2G45960" "AT2G46250" "AT2G46630" "AT2G46820" "AT2G47370" "AT2G47440" "AT2G47590"
## [603] "AT2G47840" "AT2G47930" "AT2G47940" "AT3G01060" "AT3G01440" "AT3G01480" "AT3G01490"
## [610] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02640" "AT3G02730" "AT3G03780" "AT3G03820"
## [617] "AT3G03980" "AT3G04140" "AT3G04160" "AT3G04550" "AT3G04960" "AT3G05190" "AT3G05620"
## [624] "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06145" "AT3G06160" "AT3G06433"
## [631] "AT3G06750" "AT3G06770" "AT3G07010" "AT3G07200" "AT3G07210" "AT3G07320" "AT3G07460"
## [638] "AT3G07540" "AT3G08030" "AT3G08600" "AT3G08920" "AT3G08940" "AT3G09035" "AT3G09160"
## [645] "AT3G09162" "AT3G09580" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10080" "AT3G10150"
## [652] "AT3G10160" "AT3G10200" "AT3G10340" "AT3G10840" "AT3G11110" "AT3G11700" "AT3G12110"
## [659] "AT3G12520" "AT3G12610" "AT3G12780" "AT3G13000" "AT3G13065" "AT3G13120" "AT3G13180"
## [666] "AT3G13240" "AT3G13470" "AT3G13510" "AT3G13750" "AT3G14210" "AT3G14240" "AT3G14310"
## [673] "AT3G14330" "AT3G14350" "AT3G14415" "AT3G14420" "AT3G15030" "AT3G15110" "AT3G15354"
## [680] "AT3G15530" "AT3G15570" "AT3G15680" "AT3G15720" "AT3G15800" "AT3G15850" "AT3G16180"
## [687] "AT3G16240" "AT3G16250" "AT3G16370" "AT3G16520" "AT3G16530" "AT3G16660" "AT3G16850"
## [694] "AT3G17350" "AT3G17640" "AT3G17830" "AT3G18050" "AT3G18080" "AT3G18090" "AT3G18110"
## [701] "AT3G18530" "AT3G18670" "AT3G18710" "AT3G18773" "AT3G18800" "AT3G18850" "AT3G18890"
## [708] "AT3G19002" "AT3G19120" "AT3G19480" "AT3G19710" "AT3G19850" "AT3G20015" "AT3G20260"
## [715] "AT3G20350" "AT3G20640" "AT3G20760" "AT3G20810" "AT3G20820" "AT3G21260" "AT3G21352"
## [722] "AT3G21460" "AT3G21870" "AT3G22120" "AT3G22121" "AT3G22142" "AT3G22150" "AT3G22790"
## [729] "AT3G22810" "AT3G23450" "AT3G23700" "AT3G23730" "AT3G23760" "AT3G23810" "AT3G23870"
## [736] "AT3G23880" "AT3G24255" "AT3G24400" "AT3G24430" "AT3G24480" "AT3G25130" "AT3G25410"
## [743] "AT3G25500" "AT3G25700" "AT3G25805" "AT3G25920" "AT3G26060" "AT3G26240" "AT3G26310"
## [750] "AT3G26320" "AT3G26445" "AT3G26510" "AT3G26520" "AT3G26570" "AT3G26650" "AT3G26932"
## [757] "AT3G27030" "AT3G27660" "AT3G27850" "AT3G27900" "AT3G28040" "AT3G28070" "AT3G28080"
## [764] "AT3G28130" "AT3G28200" "AT3G28860" "AT3G29185" "AT3G29320" "AT3G29670" "AT3G30720"
## [771] "AT3G42670" "AT3G43790" "AT3G44990" "AT3G45010" "AT3G45230" "AT3G45420" "AT3G45430"
## [778] "AT3G45940" "AT3G46130" "AT3G46370" "AT3G46550" "AT3G46580" "AT3G46780" "AT3G46900"
## [785] "AT3G46970" "AT3G47400" "AT3G48200" "AT3G48420" "AT3G48460" "AT3G48610" "AT3G48720"
## [792] "AT3G49260" "AT3G49290" "AT3G49670" "AT3G49740" "AT3G50120" "AT3G50220" "AT3G50240"
## [799] "AT3G50685" "AT3G50790" "AT3G50820" "AT3G50840" "AT3G50890" "AT3G51080" "AT3G51150"
## [806] "AT3G51420" "AT3G51470" "AT3G51480" "AT3G51510" "AT3G51820" "AT3G51910" "AT3G52150"
## [813] "AT3G52370" "AT3G52670" "AT3G52720" "AT3G52940" "AT3G52960" "AT3G53130" "AT3G53140"
## [820] "AT3G53190" "AT3G53420" "AT3G53460" "AT3G53800" "AT3G53950" "AT3G54050" "AT3G54400"
## [827] "AT3G54600" "AT3G54690" "AT3G54830" "AT3G54910" "AT3G54920" "AT3G55330" "AT3G55630"
## [834] "AT3G55800" "AT3G56160" "AT3G56370" "AT3G56650" "AT3G56940" "AT3G57180" "AT3G57830"
## [841] "AT3G58120" "AT3G58620" "AT3G58820" "AT3G59250" "AT3G59400" "AT3G59780" "AT3G59890"
## [848] "AT3G60070" "AT3G60320" "AT3G60370" "AT3G60530" "AT3G60630" "AT3G60750" "AT3G61160"
## [855] "AT3G61470" "AT3G61490" "AT3G61750" "AT3G61820" "AT3G61870" "AT3G61950" "AT3G62020"
## [862] "AT3G62070" "AT3G62550" "AT3G62690" "AT3G62750" "AT3G62910" "AT3G63110" "AT3G63140"
## [869] "AT3G63160" "AT3G63170" "AT3G63410" "AT3G63510" "AT4G00165" "AT4G00370" "AT4G00400"
## [876] "AT4G00950" "AT4G01130" "AT4G01310" "AT4G01330" "AT4G01440" "AT4G01460" "AT4G01670"
## [883] "AT4G02290" "AT4G02330" "AT4G02630" "AT4G02770" "AT4G03010" "AT4G03060" "AT4G03140"
## [890] "AT4G03190" "AT4G03210" "AT4G03280" "AT4G04330" "AT4G04340" "AT4G04350" "AT4G04450"
## [897] "AT4G04810" "AT4G07400" "AT4G07960" "AT4G09010" "AT4G09160" "AT4G09420" "AT4G09640"
## [904] "AT4G09650" "AT4G10120" "AT4G10340" "AT4G10800" "AT4G11290" "AT4G11450" "AT4G12030"
## [911] "AT4G12310" "AT4G12320" "AT4G12390" "AT4G12420" "AT4G12480" "AT4G12730" "AT4G12800"
## [918] "AT4G12830" "AT4G12900" "AT4G12917" "AT4G12970" "AT4G12980" "AT4G13260" "AT4G13340"
## [925] "AT4G13560" "AT4G13990" "AT4G14480" "AT4G14713" "AT4G14740" "AT4G14750" "AT4G14940"
## [932] "AT4G15210" "AT4G15510" "AT4G15810" "AT4G15960" "AT4G16140" "AT4G16141" "AT4G16370"
## [939] "AT4G16980" "AT4G17180" "AT4G17340" "AT4G17460" "AT4G17560" "AT4G17600" "AT4G17810"
## [946] "AT4G18197" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19170" "AT4G19380" "AT4G19530"
## [953] "AT4G20130" "AT4G20140" "AT4G20360" "AT4G20430" "AT4G20820" "AT4G20840" "AT4G21280"
## [960] "AT4G21870" "AT4G22120" "AT4G22690" "AT4G22890" "AT4G23000" "AT4G23290" "AT4G23740"
## [967] "AT4G23820" "AT4G23940" "AT4G24250" "AT4G24570" "AT4G24660" "AT4G24780" "AT4G24790"
## [974] "AT4G24810" "AT4G24930" "AT4G24972" "AT4G25050" "AT4G25080" "AT4G25100" "AT4G25200"
## [981] "AT4G25490" "AT4G25780" "AT4G25910" "AT4G25960" "AT4G25990" "AT4G26370" "AT4G26520"
## [988] "AT4G26530" "AT4G26540" "AT4G26542" "AT4G27030" "AT4G27440" "AT4G27720" "AT4G27730"
## [995] "AT4G27970" "AT4G27980" "AT4G28050" "AT4G28080" "AT4G28162" "AT4G28180"
## [ reached getOption("max.print") -- omitted 391 entries ]
##
## $Up$`M12-V12`
## [1] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" "AT1G02710" "AT1G03130" "AT1G03300"
## [8] "AT1G03457" "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04730" "AT1G04980" "AT1G05420"
## [15] "AT1G06160" "AT1G06760" "AT1G07300" "AT1G07880" "AT1G08300" "AT1G08380" "AT1G08560"
## [22] "AT1G08900" "AT1G09080" "AT1G09200" "AT1G09440" "AT1G09750" "AT1G10020" "AT1G10380"
## [29] "AT1G10657" "AT1G10910" "AT1G10930" "AT1G10990" "AT1G11000" "AT1G11350" "AT1G11380"
## [36] "AT1G12460" "AT1G12700" "AT1G12730" "AT1G12860" "AT1G13110" "AT1G13650" "AT1G13700"
## [43] "AT1G14070" "AT1G14180" "AT1G14185" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15125"
## [50] "AT1G15550" "AT1G15890" "AT1G15980" "AT1G15990" "AT1G16640" "AT1G17147" "AT1G17990"
## [57] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550"
## [64] "AT1G18620" "AT1G18650" "AT1G19340" "AT1G19610" "AT1G19620" "AT1G20640" "AT1G21050"
## [71] "AT1G21120" "AT1G21130" "AT1G21326" "AT1G21580" "AT1G21910" "AT1G21920" "AT1G22330"
## [78] "AT1G22370" "AT1G22590" "AT1G22740" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205"
## [85] "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23750" "AT1G25440" "AT1G26150" "AT1G26420"
## [92] "AT1G26800" "AT1G27020" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G28400"
## [99] "AT1G28660" "AT1G28670" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [106] "AT1G29510" "AT1G29600" "AT1G29660" "AT1G29715" "AT1G30520" "AT1G30840" "AT1G31173"
## [113] "AT1G31355" "AT1G31820" "AT1G31835" "AT1G31920" "AT1G31950" "AT1G32740" "AT1G33055"
## [120] "AT1G33240" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34315" "AT1G35140" "AT1G36940"
## [127] "AT1G44900" "AT1G47890" "AT1G48260" "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49200"
## [134] "AT1G49230" "AT1G50040" "AT1G50180" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [141] "AT1G51850" "AT1G51920" "AT1G51940" "AT1G52190" "AT1G52230" "AT1G52750" "AT1G52800"
## [148] "AT1G53070" "AT1G53230" "AT1G53233" "AT1G53410" "AT1G54730" "AT1G54740" "AT1G54820"
## [155] "AT1G55330" "AT1G55370" "AT1G56220" "AT1G56720" "AT1G57943" "AT1G58225" "AT1G60390"
## [162] "AT1G60830" "AT1G60860" "AT1G61190" "AT1G61240" "AT1G61300" "AT1G61500" "AT1G61795"
## [169] "AT1G62520" "AT1G62790" "AT1G62910" "AT1G63080" "AT1G63260" "AT1G63400" "AT1G63530"
## [176] "AT1G63570" "AT1G63880" "AT1G64320" "AT1G64625" "AT1G65295" "AT1G65500" "AT1G65845"
## [183] "AT1G66180" "AT1G66810" "AT1G66920" "AT1G66940" "AT1G67590" "AT1G68190" "AT1G68520"
## [190] "AT1G68585" "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69780" "AT1G70100"
## [197] "AT1G70940" "AT1G71030" "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72270" "AT1G72416"
## [204] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G73110" "AT1G73830" "AT1G73890"
## [211] "AT1G74670" "AT1G74930" "AT1G74940" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75250"
## [218] "AT1G75388" "AT1G75390" "AT1G75750" "AT1G76100" "AT1G76960" "AT1G77131" "AT1G77138"
## [225] "AT1G77210" "AT1G77510" "AT1G77640" "AT1G77990" "AT1G78000" "AT1G78265" "AT1G78270"
## [232] "AT1G78450" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G79110" "AT1G79760" "AT1G79960"
## [239] "AT1G80630" "AT2G01420" "AT2G01630" "AT2G01860" "AT2G02020" "AT2G02780" "AT2G02950"
## [246] "AT2G02980" "AT2G03310" "AT2G03750" "AT2G05160" "AT2G05632" "AT2G05790" "AT2G06850"
## [253] "AT2G07680" "AT2G07690" "AT2G13550" "AT2G14050" "AT2G14660" "AT2G14890" "AT2G15880"
## [260] "AT2G15890" "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17740" "AT2G17780" "AT2G17880"
## [267] "AT2G18300" "AT2G18560" "AT2G18890" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20170"
## [274] "AT2G20180" "AT2G20950" "AT2G22810" "AT2G22830" "AT2G22890" "AT2G23100" "AT2G23290"
## [281] "AT2G23600" "AT2G24170" "AT2G24280" "AT2G24350" "AT2G24610" "AT2G25200" "AT2G25470"
## [288] "AT2G25680" "AT2G25790" "AT2G25900" "AT2G26710" "AT2G26870" "AT2G28040" "AT2G28050"
## [295] "AT2G28120" "AT2G28460" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950" "AT2G29290"
## [302] "AT2G29320" "AT2G29410" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30930" "AT2G31150"
## [309] "AT2G31751" "AT2G32100" "AT2G33020" "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33480"
## [316] "AT2G33830" "AT2G34510" "AT2G34620" "AT2G35170" "AT2G35260" "AT2G35590" "AT2G36050"
## [323] "AT2G36200" "AT2G36400" "AT2G36970" "AT2G37450" "AT2G37950" "AT2G39180" "AT2G39430"
## [330] "AT2G39580" "AT2G39730" "AT2G40100" "AT2G40530" "AT2G40610" "AT2G40711" "AT2G40850"
## [337] "AT2G41250" "AT2G41550" "AT2G41820" "AT2G41940" "AT2G42040" "AT2G42170" "AT2G42300"
## [344] "AT2G42320" "AT2G42380" "AT2G42690" "AT2G42940" "AT2G42960" "AT2G43150" "AT2G43445"
## [351] "AT2G44370" "AT2G44380" "AT2G44630" "AT2G44740" "AT2G45180" "AT2G45830" "AT2G45850"
## [358] "AT2G47440" "AT2G47480" "AT2G47920" "AT2G47930" "AT3G01480" "AT3G01490" "AT3G02370"
## [365] "AT3G02640" "AT3G03820" "AT3G04160" "AT3G04300" "AT3G04720" "AT3G04960" "AT3G05320"
## [372] "AT3G05740" "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06740" "AT3G07010"
## [379] "AT3G07210" "AT3G07460" "AT3G07540" "AT3G08600" "AT3G08940" "AT3G08970" "AT3G09160"
## [386] "AT3G09730" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10120" "AT3G10520" "AT3G10525"
## [393] "AT3G11110" "AT3G12110" "AT3G12150" "AT3G12170" "AT3G12610" "AT3G12820" "AT3G13000"
## [400] "AT3G13062" "AT3G13437" "AT3G14210" "AT3G14240" "AT3G14740" "AT3G15356" "AT3G15400"
## [407] "AT3G15450" "AT3G15570" "AT3G16175" "AT3G16250" "AT3G16520" "AT3G16530" "AT3G17160"
## [414] "AT3G18035" "AT3G18050" "AT3G18080" "AT3G18730" "AT3G18773" "AT3G19380" "AT3G19680"
## [421] "AT3G19850" "AT3G20015" "AT3G20200" "AT3G20350" "AT3G20820" "AT3G21060" "AT3G21500"
## [428] "AT3G22060" "AT3G22150" "AT3G22460" "AT3G22968" "AT3G22970" "AT3G23440" "AT3G23550"
## [435] "AT3G23730" "AT3G23740" "AT3G23880" "AT3G24760" "AT3G25130" "AT3G25500" "AT3G25717"
## [442] "AT3G26200" "AT3G26320" "AT3G26445" "AT3G26490" "AT3G26510" "AT3G26740" "AT3G26890"
## [449] "AT3G26932" "AT3G27060" "AT3G27360" "AT3G28040" "AT3G28070" "AT3G28860" "AT3G29035"
## [456] "AT3G29670" "AT3G29680" "AT3G30720" "AT3G42670" "AT3G44260" "AT3G45230" "AT3G45290"
## [463] "AT3G45330" "AT3G45850" "AT3G45940" "AT3G45980" "AT3G46320" "AT3G46550" "AT3G46580"
## [470] "AT3G48200" "AT3G48490" "AT3G48600" "AT3G49650" "AT3G50120" "AT3G50240" "AT3G50840"
## [477] "AT3G51220" "AT3G51740" "AT3G51910" "AT3G52070" "AT3G52072" "AT3G52630" "AT3G52720"
## [484] "AT3G53800" "AT3G54910" "AT3G55090" "AT3G55580" "AT3G56000" "AT3G56160" "AT3G58120"
## [491] "AT3G58620" "AT3G59120" "AT3G59250" "AT3G59550" "AT3G59780" "AT3G60320" "AT3G61820"
## [498] "AT3G62150" "AT3G62500" "AT3G62550" "AT3G62690" "AT3G62750" "AT4G00020" "AT4G00950"
## [505] "AT4G01330" "AT4G01460" "AT4G02060" "AT4G02075" "AT4G02110" "AT4G02330" "AT4G02540"
## [512] "AT4G02630" "AT4G02900" "AT4G03115" "AT4G03140" "AT4G03190" "AT4G03210" "AT4G05130"
## [519] "AT4G07400" "AT4G09160" "AT4G09430" "AT4G09432" "AT4G10120" "AT4G10380" "AT4G10600"
## [526] "AT4G11500" "AT4G12390" "AT4G12420" "AT4G12450" "AT4G12480" "AT4G12900" "AT4G12917"
## [533] "AT4G12980" "AT4G13100" "AT4G13340" "AT4G13493" "AT4G13494" "AT4G13495" "AT4G13560"
## [540] "AT4G13810" "AT4G14560" "AT4G14620" "AT4G14622" "AT4G14713" "AT4G14750" "AT4G14940"
## [547] "AT4G15540" "AT4G15810" "AT4G15960" "AT4G16141" "AT4G16370" "AT4G16563" "AT4G16980"
## [554] "AT4G17180" "AT4G17460" "AT4G17810" "AT4G18195" "AT4G18197" "AT4G18205" "AT4G18380"
## [561] "AT4G18540" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19090" "AT4G19170" "AT4G19370"
## [568] "AT4G19420" "AT4G19530" "AT4G19870" "AT4G20000" "AT4G20140" "AT4G20260" "AT4G20362"
## [575] "AT4G20430" "AT4G21445" "AT4G21870" "AT4G22560" "AT4G22690" "AT4G22710" "AT4G23290"
## [582] "AT4G23310" "AT4G23400" "AT4G24190" "AT4G24275" "AT4G24570" "AT4G26760" "AT4G27300"
## [589] "AT4G27440" "AT4G27730" "AT4G28160" "AT4G28162" "AT4G28310" "AT4G28350" "AT4G29310"
## [596] "AT4G30110" "AT4G30410" "AT4G31060" "AT4G31890" "AT4G32280" "AT4G32450" "AT4G32980"
## [603] "AT4G33000" "AT4G33010" "AT4G33560" "AT4G34220" "AT4G34760" "AT4G34770" "AT4G34790"
## [610] "AT4G34970" "AT4G34980" "AT4G35770" "AT4G36220" "AT4G36410" "AT4G36540" "AT4G36690"
## [617] "AT4G37800" "AT4G37925" "AT4G38080" "AT4G38400" "AT4G38700" "AT4G38840" "AT4G38860"
## [624] "AT4G38950" "AT4G39320" "AT5G01560" "AT5G01740" "AT5G01930" "AT5G02400" "AT5G02440"
## [631] "AT5G02540" "AT5G02760" "AT5G02890" "AT5G03120" "AT5G03150" "AT5G03552" "AT5G03830"
## [638] "AT5G04230" "AT5G05890" "AT5G06690" "AT5G07150" "AT5G07152" "AT5G07570" "AT5G07580"
## [645] "AT5G07590" "AT5G09730" "AT5G10150" "AT5G10250" "AT5G10260" "AT5G10530" "AT5G10690"
## [652] "AT5G10770" "AT5G11070" "AT5G11610" "AT5G11670" "AT5G12900" "AT5G13060" "AT5G13730"
## [659] "AT5G13990" "AT5G14350" "AT5G14920" "AT5G15350" "AT5G15580" "AT5G15770" "AT5G16000"
## [666] "AT5G16030" "AT5G16530" "AT5G18030" "AT5G18080" "AT5G18290" "AT5G18660" "AT5G19160"
## [673] "AT5G19190" "AT5G19810" "AT5G20410" "AT5G20450" "AT5G20635" "AT5G21222" "AT5G21930"
## [680] "AT5G22110" "AT5G22880" "AT5G22920" "AT5G22930" "AT5G23170" "AT5G23210" "AT5G23240"
## [687] "AT5G23280" "AT5G23480" "AT5G24000" "AT5G24010" "AT5G24490" "AT5G25130" "AT5G25190"
## [694] "AT5G25210" "AT5G25240" "AT5G25620" "AT5G25630" "AT5G26010" "AT5G27950" "AT5G28020"
## [701] "AT5G33280" "AT5G35732" "AT5G35750" "AT5G35790" "AT5G38140" "AT5G38410" "AT5G38420"
## [708] "AT5G38430" "AT5G39530" "AT5G39865" "AT5G40150" "AT5G41050" "AT5G41140" "AT5G41761"
## [715] "AT5G43700" "AT5G44020" "AT5G44130" "AT5G44260" "AT5G44600" "AT5G44635" "AT5G44650"
## [722] "AT5G44680" "AT5G45520" "AT5G45650" "AT5G45790" "AT5G46110" "AT5G46270" "AT5G46280"
## [729] "AT5G46440" "AT5G46690" "AT5G47220" "AT5G47230" "AT5G48320" "AT5G48360" "AT5G48670"
## [736] "AT5G48910" "AT5G49215" "AT5G49390" "AT5G49730" "AT5G49740" "AT5G50450" "AT5G51550"
## [743] "AT5G51560" "AT5G51590" "AT5G51670" "AT5G51790" "AT5G51970" "AT5G52100" "AT5G52280"
## [750] "AT5G52900" "AT5G52910" "AT5G53110" "AT5G53170" "AT5G54190" "AT5G54630" "AT5G54670"
## [757] "AT5G56100" "AT5G56220" "AT5G56580" "AT5G56840" "AT5G56850" "AT5G56870" "AT5G57550"
## [764] "AT5G57560" "AT5G57780" "AT5G58150" "AT5G58390" "AT5G59540" "AT5G59750" "AT5G59900"
## [771] "AT5G59970" "AT5G60100" "AT5G60490" "AT5G61000" "AT5G61160" "AT5G61590" "AT5G61660"
## [778] "AT5G62170" "AT5G62280" "AT5G62730" "AT5G63410" "AT5G63480" "AT5G63800" "AT5G64040"
## [785] "AT5G64120" "AT5G64330" "AT5G64410" "AT5G64630" "AT5G65350" "AT5G65360" "AT5G65600"
## [792] "AT5G65730" "AT5G66005" "AT5G66490" "AT5G66520" "AT5G66770" "AT5G66880" "AT5G67100"
##
## $Up$`A12-V12`
## [1] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02470" "AT1G02920" "AT1G02930"
## [8] "AT1G03210" "AT1G03850" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07370" "AT1G08450"
## [15] "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420" "AT1G09500" "AT1G10070" "AT1G12290"
## [22] "AT1G13420" "AT1G13520" "AT1G14880" "AT1G15125" "AT1G15310" "AT1G15380" "AT1G15890"
## [29] "AT1G17020" "AT1G17147" "AT1G17460" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G21120"
## [36] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G25275" "AT1G26290" "AT1G26380" "AT1G26420"
## [43] "AT1G26800" "AT1G27330" "AT1G27350" "AT1G30420" "AT1G30860" "AT1G32210" "AT1G33030"
## [50] "AT1G33055" "AT1G33950" "AT1G33960" "AT1G35670" "AT1G36622" "AT1G44900" "AT1G47890"
## [57] "AT1G48260" "AT1G50520" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52200" "AT1G53110"
## [64] "AT1G53620" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G58180" "AT1G58225" "AT1G58590"
## [71] "AT1G61160" "AT1G61810" "AT1G61820" "AT1G62790" "AT1G63460" "AT1G65470" "AT1G65486"
## [78] "AT1G65490" "AT1G65845" "AT1G66345" "AT1G66960" "AT1G67520" "AT1G67630" "AT1G67810"
## [85] "AT1G67980" "AT1G68585" "AT1G69490" "AT1G69543" "AT1G69720" "AT1G71970" "AT1G72060"
## [92] "AT1G72070" "AT1G74590" "AT1G75170" "AT1G75830" "AT1G76960" "AT1G77145" "AT1G77920"
## [99] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79450" "AT1G79960" "AT1G80460"
## [106] "AT2G01818" "AT2G02060" "AT2G02350" "AT2G02360" "AT2G02930" "AT2G04515" "AT2G07690"
## [113] "AT2G14560" "AT2G14610" "AT2G17040" "AT2G18660" "AT2G19190" "AT2G21185" "AT2G21187"
## [120] "AT2G23170" "AT2G23840" "AT2G24040" "AT2G24240" "AT2G24390" "AT2G25625" "AT2G26560"
## [127] "AT2G27389" "AT2G27390" "AT2G27660" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28940"
## [134] "AT2G29350" "AT2G29470" "AT2G29950" "AT2G30480" "AT2G31020" "AT2G31730" "AT2G31865"
## [141] "AT2G32160" "AT2G32460" "AT2G32680" "AT2G33480" "AT2G33520" "AT2G37750" "AT2G39320"
## [148] "AT2G40110" "AT2G40550" "AT2G40880" "AT2G41082" "AT2G41250" "AT2G41380" "AT2G41440"
## [155] "AT2G43000" "AT2G43150" "AT2G44370" "AT2G44380" "AT2G44980" "AT2G45510" "AT2G46380"
## [162] "AT3G02820" "AT3G03470" "AT3G03610" "AT3G03650" "AT3G04070" "AT3G04720" "AT3G05740"
## [169] "AT3G05870" "AT3G07580" "AT3G07600" "AT3G07800" "AT3G10320" "AT3G11000" "AT3G11090"
## [176] "AT3G12220" "AT3G12230" "AT3G13433" "AT3G13437" "AT3G13790" "AT3G14280" "AT3G14700"
## [183] "AT3G14740" "AT3G15518" "AT3G18250" "AT3G18730" "AT3G19390" "AT3G19615" "AT3G19660"
## [190] "AT3G20340" "AT3G21780" "AT3G22460" "AT3G23740" "AT3G26210" "AT3G26220" "AT3G26230"
## [197] "AT3G26440" "AT3G26470" "AT3G26500" "AT3G28540" "AT3G28570" "AT3G28850" "AT3G28950"
## [204] "AT3G29240" "AT3G44300" "AT3G44490" "AT3G45290" "AT3G45330" "AT3G45860" "AT3G45930"
## [211] "AT3G47830" "AT3G47836" "AT3G48490" "AT3G48630" "AT3G48640" "AT3G49110" "AT3G49130"
## [218] "AT3G49540" "AT3G50550" "AT3G51250" "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920"
## [225] "AT3G52630" "AT3G52748" "AT3G53150" "AT3G53235" "AT3G54150" "AT3G56500" "AT3G56870"
## [232] "AT3G56891" "AT3G57240" "AT3G57550" "AT3G59100" "AT3G60540" "AT3G61198" "AT3G61390"
## [239] "AT3G62590" "AT3G62600" "AT3G63030" "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060"
## [246] "AT4G02110" "AT4G02520" "AT4G04620" "AT4G04740" "AT4G08770" "AT4G09750" "AT4G10860"
## [253] "AT4G11070" "AT4G11300" "AT4G13900" "AT4G14020" "AT4G14800" "AT4G15530" "AT4G15610"
## [260] "AT4G17660" "AT4G18360" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21610"
## [267] "AT4G21730" "AT4G22520" "AT4G23260" "AT4G23271" "AT4G25000" "AT4G25070" "AT4G25900"
## [274] "AT4G27745" "AT4G28310" "AT4G28390" "AT4G28405" "AT4G30640" "AT4G32870" "AT4G33355"
## [281] "AT4G33925" "AT4G34060" "AT4G34135" "AT4G36710" "AT4G37310" "AT4G37390" "AT4G37520"
## [288] "AT4G38080" "AT4G39190" "AT4G39580" "AT5G01550" "AT5G01610" "AT5G02502" "AT5G02520"
## [295] "AT5G02690" "AT5G03285" "AT5G04180" "AT5G05270" "AT5G05300" "AT5G06310" "AT5G07650"
## [302] "AT5G07660" "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08760" "AT5G09290"
## [309] "AT5G10390" "AT5G10400" "AT5G10440" "AT5G11920" "AT5G11950" "AT5G14420" "AT5G15860"
## [316] "AT5G15870" "AT5G17330" "AT5G20400" "AT5G20960" "AT5G22880" "AT5G23420" "AT5G24205"
## [323] "AT5G24206" "AT5G24230" "AT5G24910" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26731"
## [330] "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38900" "AT5G39520" "AT5G39680" "AT5G39950"
## [337] "AT5G40010" "AT5G40240" "AT5G40690" "AT5G40720" "AT5G41160" "AT5G41880" "AT5G42530"
## [344] "AT5G42830" "AT5G43910" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G46230" "AT5G46500"
## [351] "AT5G47220" "AT5G48180" "AT5G48290" "AT5G49690" "AT5G50460" "AT5G52720" "AT5G52910"
## [358] "AT5G52990" "AT5G53820" "AT5G54490" "AT5G54500" "AT5G54840" "AT5G55460" "AT5G56050"
## [365] "AT5G56120" "AT5G56870" "AT5G57010" "AT5G57550" "AT5G58840" "AT5G59530" "AT5G59662"
## [372] "AT5G59890" "AT5G60530" "AT5G61000" "AT5G61070" "AT5G61160" "AT5G61460" "AT5G61490"
## [379] "AT5G63135" "AT5G63240" "AT5G63550" "AT5G64000" "AT5G64190" "AT5G65350" "AT5G65360"
## [386] "AT5G66170" "AT5G67100" "AT5G67600"
##
##
## $Down
## $Down$`M1-A1`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT4G12480" "AT4G18540" "AT4G23550" "AT4G33980"
## [17] "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100"
##
## $Down$`M1-V1`
## [1] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" "AT1G04280" "AT1G04620" "AT1G04990"
## [8] "AT1G05020" "AT1G05300" "AT1G05710" "AT1G06460" "AT1G07040" "AT1G07050" "AT1G07160"
## [15] "AT1G07420" "AT1G08980" "AT1G10040" "AT1G10070" "AT1G10200" "AT1G10710" "AT1G10990"
## [22] "AT1G11200" "AT1G11362" "AT1G11925" "AT1G11950" "AT1G12710" "AT1G12730" "AT1G13110"
## [29] "AT1G13270" "AT1G14170" "AT1G14540" "AT1G14870" "AT1G15125" "AT1G15670" "AT1G15890"
## [36] "AT1G16090" "AT1G17665" "AT1G19130" "AT1G19370" "AT1G20010" "AT1G20620" "AT1G20630"
## [43] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G22180" "AT1G22370"
## [50] "AT1G22480" "AT1G22490" "AT1G22770" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26380"
## [57] "AT1G26410" "AT1G26420" "AT1G26665" "AT1G27020" "AT1G27630" "AT1G28050" "AT1G28330"
## [64] "AT1G29160" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700" "AT1G30755"
## [71] "AT1G31690" "AT1G33030" "AT1G34380" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48605"
## [78] "AT1G49230" "AT1G49720" "AT1G51610" "AT1G51620" "AT1G51850" "AT1G51890" "AT1G51920"
## [85] "AT1G51940" "AT1G52200" "AT1G53035" "AT1G53100" "AT1G53625" "AT1G55450" "AT1G56140"
## [92] "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G59950" "AT1G60730"
## [99] "AT1G61360" "AT1G61420" "AT1G61550" "AT1G61560" "AT1G63180" "AT1G64110" "AT1G64760"
## [106] "AT1G65820" "AT1G66700" "AT1G66780" "AT1G67370" "AT1G67970" "AT1G67980" "AT1G68050"
## [113] "AT1G69520" "AT1G70220" "AT1G70800" "AT1G71000" "AT1G71400" "AT1G71520" "AT1G72330"
## [120] "AT1G72416" "AT1G74010" "AT1G75830" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77810"
## [127] "AT1G79440" "AT1G79460" "AT1G79680" "AT2G01540" "AT2G02010" "AT2G02100" "AT2G02220"
## [134] "AT2G02410" "AT2G02930" "AT2G05630" "AT2G05753" "AT2G14170" "AT2G15890" "AT2G16365"
## [141] "AT2G17740" "AT2G19190" "AT2G19450" "AT2G21130" "AT2G21660" "AT2G22450" "AT2G22970"
## [148] "AT2G22980" "AT2G23030" "AT2G23110" "AT2G24570" "AT2G24645" "AT2G25730" "AT2G25930"
## [155] "AT2G26560" "AT2G26650" "AT2G27200" "AT2G28190" "AT2G28930" "AT2G29720" "AT2G29740"
## [162] "AT2G30395" "AT2G30424" "AT2G30750" "AT2G30770" "AT2G31010" "AT2G33830" "AT2G35980"
## [169] "AT2G36390" "AT2G36815" "AT2G37430" "AT2G37940" "AT2G38465" "AT2G38860" "AT2G39200"
## [176] "AT2G39380" "AT2G39400" "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39900"
## [183] "AT2G39920" "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G42360" "AT2G43590"
## [190] "AT2G43620" "AT2G43940" "AT2G44080" "AT2G46940" "AT2G47390" "AT3G02800" "AT3G04420"
## [197] "AT3G05390" "AT3G07640" "AT3G07650" "AT3G09390" "AT3G09405" "AT3G10410" "AT3G11020"
## [204] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G13450" "AT3G13700" "AT3G13710"
## [211] "AT3G14360" "AT3G15356" "AT3G15518" "AT3G15620" "AT3G16180" "AT3G16360" "AT3G16530"
## [218] "AT3G16565" "AT3G18080" "AT3G19210" "AT3G19260" "AT3G19615" "AT3G20410" "AT3G21240"
## [225] "AT3G21470" "AT3G22460" "AT3G23280" "AT3G26500" "AT3G26670" "AT3G26680" "AT3G26740"
## [232] "AT3G26830" "AT3G27210" "AT3G27300" "AT3G28370" "AT3G30720" "AT3G43670" "AT3G43790"
## [239] "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46440" "AT3G46640" "AT3G46690" "AT3G47360"
## [246] "AT3G47800" "AT3G47860" "AT3G48490" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G50120"
## [253] "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50810" "AT3G51330" "AT3G52450" "AT3G54150"
## [260] "AT3G55150" "AT3G55450" "AT3G56500" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G59330"
## [267] "AT3G59350" "AT3G59700" "AT3G59900" "AT3G61160" "AT3G62150" "AT3G63160" "AT3G63380"
## [274] "AT4G01130" "AT4G01250" "AT4G01750" "AT4G02380" "AT4G02520" "AT4G03460" "AT4G04330"
## [281] "AT4G09020" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12470" "AT4G12480" "AT4G14270"
## [288] "AT4G15233" "AT4G16146" "AT4G16820" "AT4G17140" "AT4G18430" "AT4G18540" "AT4G18800"
## [295] "AT4G19120" "AT4G19390" "AT4G19410" "AT4G19810" "AT4G19880" "AT4G20000" "AT4G22710"
## [302] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23810" "AT4G25810" "AT4G25900" "AT4G26270"
## [309] "AT4G26670" "AT4G27130" "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G29600"
## [316] "AT4G30690" "AT4G31050" "AT4G31550" "AT4G31620" "AT4G32340" "AT4G33160" "AT4G33980"
## [323] "AT4G33985" "AT4G34580" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990" "AT4G35180"
## [330] "AT4G35380" "AT4G36760" "AT4G36770" "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410"
## [337] "AT4G38000" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G39230" "AT4G39270" "AT4G40070"
## [344] "AT5G02160" "AT5G02260" "AT5G02780" "AT5G03460" "AT5G05190" "AT5G05410" "AT5G06690"
## [351] "AT5G08380" "AT5G08490" "AT5G09500" "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150"
## [358] "AT5G11210" "AT5G11670" "AT5G12880" "AT5G12930" "AT5G14560" "AT5G15030" "AT5G15640"
## [365] "AT5G15840" "AT5G16380" "AT5G18470" "AT5G18525" "AT5G18540" "AT5G20950" "AT5G23235"
## [372] "AT5G23240" "AT5G23575" "AT5G23660" "AT5G24030" "AT5G24110" "AT5G24240" "AT5G24470"
## [379] "AT5G25340" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G33290"
## [386] "AT5G34780" "AT5G37740" "AT5G38895" "AT5G39410" "AT5G39580" "AT5G40240" "AT5G40760"
## [393] "AT5G41260" "AT5G42900" "AT5G44010" "AT5G44380" "AT5G44480" "AT5G44910" "AT5G46050"
## [400] "AT5G46600" "AT5G46860" "AT5G46871" "AT5G48250" "AT5G48430" "AT5G49015" "AT5G49900"
## [407] "AT5G50200" "AT5G51570" "AT5G51790" "AT5G53110" "AT5G54190" "AT5G54930" "AT5G54960"
## [414] "AT5G55050" "AT5G55090" "AT5G55530" "AT5G56580" "AT5G56960" "AT5G57110" "AT5G57220"
## [421] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G59310" "AT5G59530" "AT5G59570"
## [428] "AT5G60100" "AT5G61160" "AT5G61380" "AT5G61520" "AT5G61560" "AT5G62200" "AT5G62720"
## [435] "AT5G62900" "AT5G63810" "AT5G64660" "AT5G64860" "AT5G64905" "AT5G65600" "AT5G65609"
## [442] "AT5G66052" "AT5G66053" "AT5G66790"
##
## $Down$`A1-V1`
## [1] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" "AT2G25730" "AT2G40080" "AT3G07640" "AT3G07650"
## [9] "AT4G01130" "AT4G04330" "AT4G26670" "AT4G33980" "AT5G02150" "AT5G11150" "AT5G39410" "AT5G42900"
## [17] "AT5G48250" "AT5G57110" "AT5G59570" "AT5G60100" "AT5G61380"
##
## $Down$`M6-A6`
## [1] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01560" "AT1G01660" "AT1G01680"
## [8] "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450"
## [15] "AT1G02470" "AT1G02500" "AT1G02520" "AT1G02740" "AT1G02850" "AT1G02920" "AT1G02930"
## [22] "AT1G03050" "AT1G03495" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600"
## [29] "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05880"
## [36] "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06620" "AT1G07000" "AT1G07430" "AT1G07500"
## [43] "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08450" "AT1G08860" "AT1G09930" "AT1G09932"
## [50] "AT1G10040" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10990" "AT1G11330" "AT1G11905"
## [57] "AT1G12160" "AT1G12200" "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12940" "AT1G13310"
## [64] "AT1G13330" "AT1G13340" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550"
## [71] "AT1G13830" "AT1G14480" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15415" "AT1G15520"
## [78] "AT1G15790" "AT1G16090" "AT1G16150" "AT1G16300" "AT1G16420" "AT1G16670" "AT1G17170"
## [85] "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17744"
## [92] "AT1G17745" "AT1G17750" "AT1G17830" "AT1G18570" "AT1G18890" "AT1G18910" "AT1G19020"
## [99] "AT1G19250" "AT1G19540" "AT1G20310" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310"
## [106] "AT1G21370" "AT1G21390" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22180" "AT1G22220"
## [113] "AT1G22400" "AT1G22403" "AT1G23200" "AT1G23710" "AT1G23840" "AT1G23850" "AT1G24095"
## [120] "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G26130" "AT1G26380"
## [127] "AT1G26390" "AT1G26410" "AT1G26420" "AT1G27110" "AT1G27770" "AT1G28370" "AT1G28480"
## [134] "AT1G29195" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30190" "AT1G30270"
## [141] "AT1G30420" "AT1G30620" "AT1G30814" "AT1G30850" "AT1G30900" "AT1G31010" "AT1G31290"
## [148] "AT1G31880" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950" "AT1G32960"
## [155] "AT1G33030" "AT1G33110" "AT1G33420" "AT1G33430" "AT1G33560" "AT1G33720" "AT1G33730"
## [162] "AT1G33800" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35210"
## [169] "AT1G35230" "AT1G35710" "AT1G35910" "AT1G36622" "AT1G37130" "AT1G42980" "AT1G43910"
## [176] "AT1G44130" "AT1G45145" "AT1G47210" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320"
## [183] "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49050" "AT1G50400" "AT1G51640" "AT1G51645"
## [190] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51850" "AT1G51860" "AT1G51890" "AT1G51920"
## [197] "AT1G52315" "AT1G52540" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53620"
## [204] "AT1G53625" "AT1G54000" "AT1G54960" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [211] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G57560"
## [218] "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590" "AT1G59865" "AT1G60730" "AT1G61140"
## [225] "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61340" "AT1G61370" "AT1G61415"
## [232] "AT1G61420" "AT1G61550" "AT1G61640" "AT1G61800" "AT1G61810" "AT1G62320" "AT1G62422"
## [239] "AT1G62580" "AT1G63245" "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G64065"
## [246] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65690"
## [253] "AT1G65870" "AT1G66090" "AT1G66250" "AT1G66390" "AT1G66460" "AT1G66550" "AT1G66590"
## [260] "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67060"
## [267] "AT1G67070" "AT1G67360" "AT1G67520" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67800"
## [274] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67920" "AT1G67980" "AT1G68110" "AT1G68200"
## [281] "AT1G68250" "AT1G68390" "AT1G68620" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G69260"
## [288] "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69930" "AT1G70140"
## [295] "AT1G70170" "AT1G70690" "AT1G70990" "AT1G71390" "AT1G71690" "AT1G72000" "AT1G72220"
## [302] "AT1G72240" "AT1G72540" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72870"
## [309] "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010" "AT1G73130"
## [316] "AT1G73330" "AT1G73805" "AT1G73810" "AT1G73965" "AT1G74080" "AT1G74100" "AT1G74200"
## [323] "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750" "AT1G75040" "AT1G75060"
## [330] "AT1G75170" "AT1G75830" "AT1G76040" "AT1G76620" "AT1G76760" "AT1G76970" "AT1G76980"
## [337] "AT1G77500" "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78190" "AT1G78380"
## [344] "AT1G78410" "AT1G78780" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G80110" "AT1G80280"
## [351] "AT1G80300" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80830" "AT1G80840" "AT2G01180"
## [358] "AT2G01300" "AT2G01818" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02930" "AT2G03090"
## [365] "AT2G03505" "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450"
## [372] "AT2G04495" "AT2G04515" "AT2G05940" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13790"
## [379] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G16060" "AT2G16720"
## [386] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17440" "AT2G17500"
## [393] "AT2G17720" "AT2G18000" "AT2G18193" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G19190"
## [400] "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20562" "AT2G21188" "AT2G21350" "AT2G21470"
## [407] "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790" "AT2G22200" "AT2G22470" "AT2G23680"
## [414] "AT2G23810" "AT2G24285" "AT2G24490" "AT2G24850" "AT2G25190" "AT2G25240" "AT2G25260"
## [421] "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G26170" "AT2G26300" "AT2G26390"
## [428] "AT2G26400" "AT2G26480" "AT2G28160" "AT2G28210" "AT2G28400" "AT2G28570" "AT2G29100"
## [435] "AT2G29400" "AT2G29460" "AT2G29720" "AT2G29750" "AT2G29990" "AT2G30070" "AT2G30080"
## [442] "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018" "AT2G31020"
## [449] "AT2G31270" "AT2G31585" "AT2G31865" "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32130"
## [456] "AT2G32140" "AT2G32150" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32430" "AT2G32460"
## [463] "AT2G32590" "AT2G32960" "AT2G33110" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580"
## [470] "AT2G34610" "AT2G34650" "AT2G34940" "AT2G35710" "AT2G35980" "AT2G36026" "AT2G36270"
## [477] "AT2G36580" "AT2G36670" "AT2G36690" "AT2G37070" "AT2G37100" "AT2G37260" "AT2G37440"
## [484] "AT2G37560" "AT2G37710" "AT2G37750" "AT2G37890" "AT2G37980" "AT2G38290" "AT2G38340"
## [491] "AT2G38490" "AT2G38500" "AT2G38690" "AT2G38790" "AT2G38860" "AT2G39110" "AT2G39220"
## [498] "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650"
## [505] "AT2G40095" "AT2G40140" "AT2G40670" "AT2G40740" "AT2G41010" "AT2G41100" "AT2G41342"
## [512] "AT2G41380" "AT2G41410" "AT2G41660" "AT2G41835" "AT2G41880" "AT2G42060" "AT2G42350"
## [519] "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43050" "AT2G43140" "AT2G43290"
## [526] "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290"
## [533] "AT2G44578" "AT2G44600" "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45220" "AT2G45400"
## [540] "AT2G45760" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430" "AT2G46450"
## [547] "AT2G46620" "AT2G46680" "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47200" "AT2G47490"
## [554] "AT2G47670" "AT2G47720" "AT2G47730" "AT2G47800" "AT2G47820" "AT2G47950" "AT3G01290"
## [561] "AT3G01820" "AT3G01830" "AT3G01840" "AT3G02190" "AT3G02520" "AT3G02610" "AT3G02770"
## [568] "AT3G02800" "AT3G02820" "AT3G03310" "AT3G03440" "AT3G03450" "AT3G03610" "AT3G03700"
## [575] "AT3G03702" "AT3G03855" "AT3G04060" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04670"
## [582] "AT3G05330" "AT3G05360" "AT3G05500" "AT3G05650" "AT3G05830" "AT3G06490" "AT3G06890"
## [589] "AT3G07370" "AT3G07390" "AT3G07700" "AT3G07720" "AT3G08720" "AT3G08990" "AT3G09010"
## [596] "AT3G09032" "AT3G09280" "AT3G09405" "AT3G09450" "AT3G09480" "AT3G09520" "AT3G09790"
## [603] "AT3G09910" "AT3G09960" "AT3G10500" "AT3G10540" "AT3G10660" "AT3G10815" "AT3G10820"
## [610] "AT3G11000" "AT3G11010" "AT3G11080" "AT3G11220" "AT3G11340" "AT3G11420" "AT3G11600"
## [617] "AT3G11820" "AT3G11840" "AT3G12220" "AT3G12230" "AT3G12830" "AT3G12910" "AT3G13080"
## [624] "AT3G13090" "AT3G13100" "AT3G13380" "AT3G13433" "AT3G13610" "AT3G13782" "AT3G13900"
## [631] "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14460" "AT3G14470"
## [638] "AT3G14475" "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14710" "AT3G14840"
## [645] "AT3G14990" "AT3G15300" "AT3G15518" "AT3G15990" "AT3G16030" "AT3G16510" "AT3G16620"
## [652] "AT3G16800" "AT3G16980" "AT3G17240" "AT3G17280" "AT3G17420" "AT3G17520" "AT3G17609"
## [659] "AT3G17690" "AT3G17800" "AT3G18250" "AT3G19580" "AT3G19910" "AT3G19970" "AT3G20250"
## [666] "AT3G21080" "AT3G21140" "AT3G21150" "AT3G21220" "AT3G21240" "AT3G21320" "AT3G21520"
## [673] "AT3G21530" "AT3G21560" "AT3G21700" "AT3G22160" "AT3G22400" "AT3G22560" "AT3G22600"
## [680] "AT3G22910" "AT3G22930" "AT3G23110" "AT3G23120" "AT3G23240" "AT3G24900" "AT3G24927"
## [687] "AT3G25010" "AT3G25070" "AT3G25250" "AT3G25290" "AT3G25510" "AT3G25610" "AT3G25870"
## [694] "AT3G25882" "AT3G25890" "AT3G26210" "AT3G26440" "AT3G26470" "AT3G26680" "AT3G26690"
## [701] "AT3G26830" "AT3G26840" "AT3G27290" "AT3G27330" "AT3G27415" "AT3G27416" "AT3G27560"
## [708] "AT3G28007" "AT3G28340" "AT3G28510" "AT3G28540" "AT3G28570" "AT3G28580" "AT3G28840"
## [715] "AT3G28930" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G29590" "AT3G41979" "AT3G44300"
## [722] "AT3G44350" "AT3G44400" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G45040" "AT3G45330"
## [729] "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46510" "AT3G46520"
## [736] "AT3G46620" "AT3G47050" "AT3G47090" "AT3G47480" "AT3G47530" "AT3G47540" "AT3G47730"
## [743] "AT3G47780" "AT3G48020" "AT3G48080" "AT3G48090" "AT3G48100" "AT3G48240" "AT3G48490"
## [750] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48780" "AT3G48850" "AT3G49110" "AT3G49530"
## [757] "AT3G49540" "AT3G50280" "AT3G50470" "AT3G50480" "AT3G50760" "AT3G50770" "AT3G50800"
## [764] "AT3G50930" "AT3G51330" "AT3G51350" "AT3G51860" "AT3G52310" "AT3G52400" "AT3G52430"
## [771] "AT3G52460" "AT3G52470" "AT3G52540" "AT3G52630" "AT3G52870" "AT3G53120" "AT3G53150"
## [778] "AT3G53232" "AT3G53235" "AT3G53980" "AT3G54150" "AT3G54270" "AT3G54640" "AT3G55470"
## [785] "AT3G55500" "AT3G55730" "AT3G55880" "AT3G55950" "AT3G56170" "AT3G56275" "AT3G56400"
## [792] "AT3G56500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57100" "AT3G57260" "AT3G57330"
## [799] "AT3G57380" "AT3G57460" "AT3G57630" "AT3G57880" "AT3G57950" "AT3G59010" "AT3G59150"
## [806] "AT3G59700" "AT3G59750" "AT3G60110" "AT3G60164" "AT3G60190" "AT3G60420" "AT3G60450"
## [813] "AT3G60470" "AT3G60520" "AT3G60800" "AT3G60966" "AT3G60970" "AT3G61190" "AT3G61198"
## [820] "AT3G61390" "AT3G61450" "AT3G61960" "AT3G62260" "AT3G62760" "AT3G63010" "AT3G63060"
## [827] "AT3G63380" "AT4G00700" "AT4G00820" "AT4G00850" "AT4G01010" "AT4G01200" "AT4G01360"
## [834] "AT4G01430" "AT4G01535" "AT4G01540" "AT4G01870" "AT4G01895" "AT4G01920" "AT4G01950"
## [841] "AT4G02220" "AT4G02280" "AT4G02360" "AT4G02380" "AT4G02420" "AT4G02520" "AT4G02550"
## [848] "AT4G02660" "AT4G02760" "AT4G03450" "AT4G03460" "AT4G04220" "AT4G04221" "AT4G04223"
## [855] "AT4G04490" "AT4G04500" "AT4G04510" "AT4G04540" "AT4G04620" "AT4G04920" "AT4G05020"
## [862] "AT4G05030" "AT4G05390" "AT4G08300" "AT4G08555" "AT4G08770" "AT4G09300" "AT4G09570"
## [869] "AT4G09770" "AT4G09820" "AT4G10380" "AT4G10390" "AT4G10500" "AT4G10860" "AT4G10955"
## [876] "AT4G10960" "AT4G11170" "AT4G11240" "AT4G11340" "AT4G11350" "AT4G11655" "AT4G11840"
## [883] "AT4G11850" "AT4G11890" "AT4G12120" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [890] "AT4G13000" "AT4G13180" "AT4G13320" "AT4G13820" "AT4G13900" "AT4G13918" "AT4G13920"
## [897] "AT4G14090" "AT4G14220" "AT4G14365" "AT4G14368" "AT4G14370" "AT4G14630" "AT4G14690"
## [904] "AT4G15070" "AT4G15200" "AT4G15270" "AT4G15280" "AT4G15417" "AT4G15910" "AT4G16260"
## [911] "AT4G16350" "AT4G16600" "AT4G16820" "AT4G16960" "AT4G17250" "AT4G17660" "AT4G17670"
## [918] "AT4G17695" "AT4G18250" "AT4G18360" "AT4G18430" "AT4G18630" "AT4G19370" "AT4G19925"
## [925] "AT4G19970" "AT4G20000" "AT4G20110" "AT4G20460" "AT4G21400" "AT4G21500" "AT4G21610"
## [932] "AT4G21840" "AT4G21850" "AT4G21865" "AT4G21903" "AT4G21926" "AT4G21930" "AT4G22070"
## [939] "AT4G22520" "AT4G22530" "AT4G22590" "AT4G22592" "AT4G22880" "AT4G22980" "AT4G23030"
## [946] "AT4G23140" "AT4G23150" "AT4G23160" "AT4G23200" "AT4G23210" "AT4G23215" "AT4G23220"
## [953] "AT4G23250" "AT4G23280" "AT4G23300" "AT4G23310" "AT4G23320" "AT4G23450" "AT4G23470"
## [960] "AT4G23610" "AT4G23700" "AT4G24000" "AT4G24026" "AT4G24030" "AT4G24160" "AT4G25070"
## [967] "AT4G25390" "AT4G25880" "AT4G25900" "AT4G26060" "AT4G26120" "AT4G26270" "AT4G26400"
## [974] "AT4G26470" "AT4G26910" "AT4G26970" "AT4G26990" "AT4G27220" "AT4G27280" "AT4G27290"
## [981] "AT4G27480" "AT4G27745" "AT4G27830" "AT4G28390" "AT4G28490" "AT4G29440" "AT4G29740"
## [988] "AT4G29810" "AT4G29850" "AT4G30230" "AT4G30280" "AT4G30430" "AT4G30860" "AT4G31230"
## [995] "AT4G31500" "AT4G31860" "AT4G32870" "AT4G33040" "AT4G33050" "AT4G33300"
## [ reached getOption("max.print") -- omitted 343 entries ]
##
## $Down$`M6-V6`
## [1] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520" "AT1G03010" "AT1G03200"
## [8] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G05100" "AT1G05840" "AT1G06620"
## [15] "AT1G07500" "AT1G07570" "AT1G08050" "AT1G09930" "AT1G09932" "AT1G10586" "AT1G11400"
## [22] "AT1G12160" "AT1G12380" "AT1G12540" "AT1G13150" "AT1G13310" "AT1G13330" "AT1G13340"
## [29] "AT1G13830" "AT1G14740" "AT1G15350" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G18200"
## [36] "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680" "AT1G20310"
## [43] "AT1G20460" "AT1G21240" "AT1G21740" "AT1G22180" "AT1G22220" "AT1G23060" "AT1G23850"
## [50] "AT1G26730" "AT1G26770" "AT1G26930" "AT1G28130" "AT1G28370" "AT1G29640" "AT1G30100"
## [57] "AT1G30160" "AT1G30850" "AT1G31120" "AT1G31770" "AT1G31900" "AT1G32870" "AT1G33110"
## [64] "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G37130" "AT1G43160" "AT1G43245"
## [71] "AT1G43910" "AT1G44130" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605"
## [78] "AT1G49520" "AT1G49530" "AT1G51760" "AT1G51780" "AT1G51860" "AT1G52030" "AT1G52565"
## [85] "AT1G52855" "AT1G52890" "AT1G53830" "AT1G54010" "AT1G54030" "AT1G54095" "AT1G55610"
## [92] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G58030" "AT1G59640" "AT1G60190" "AT1G60730"
## [99] "AT1G61110" "AT1G61120" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61550" "AT1G63840"
## [106] "AT1G65481" "AT1G65690" "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66280" "AT1G66350"
## [113] "AT1G66960" "AT1G67420" "AT1G67635" "AT1G67820" "AT1G68110" "AT1G69260" "AT1G69360"
## [120] "AT1G69480" "AT1G69530" "AT1G70690" "AT1G70790" "AT1G71110" "AT1G71390" "AT1G72210"
## [127] "AT1G72410" "AT1G72540" "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G74100"
## [134] "AT1G74430" "AT1G74710" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G76620" "AT1G76640"
## [141] "AT1G76980" "AT1G77280" "AT1G77760" "AT1G78290" "AT1G78780" "AT1G79270" "AT1G79310"
## [148] "AT1G80110" "AT1G80280" "AT1G80590" "AT1G80840" "AT2G01830" "AT2G02340" "AT2G04070"
## [155] "AT2G04430" "AT2G04450" "AT2G05940" "AT2G06255" "AT2G14610" "AT2G14620" "AT2G15760"
## [162] "AT2G16650" "AT2G16720" "AT2G17500" "AT2G18660" "AT2G20110" "AT2G20142" "AT2G21188"
## [169] "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G25690" "AT2G26300" "AT2G26390"
## [176] "AT2G26400" "AT2G26480" "AT2G27228" "AT2G27230" "AT2G27300" "AT2G28110" "AT2G28450"
## [183] "AT2G28570" "AT2G29100" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30540" "AT2G30770"
## [190] "AT2G30820" "AT2G30830" "AT2G31180" "AT2G32130" "AT2G32140" "AT2G32460" "AT2G32930"
## [197] "AT2G34010" "AT2G34070" "AT2G34080" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36640"
## [204] "AT2G37070" "AT2G37440" "AT2G37750" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490"
## [211] "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300" "AT2G39435" "AT2G39800" "AT2G40200"
## [218] "AT2G40460" "AT2G40670" "AT2G41070" "AT2G42060" "AT2G42760" "AT2G42890" "AT2G43000"
## [225] "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680" "AT2G44578" "AT2G44600"
## [232] "AT2G44840" "AT2G44940" "AT2G45245" "AT2G45760" "AT2G45920" "AT2G46040" "AT2G46400"
## [239] "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46900" "AT2G46970" "AT2G47000"
## [246] "AT2G47420" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01770" "AT3G02210" "AT3G02885"
## [253] "AT3G02990" "AT3G03310" "AT3G03440" "AT3G04000" "AT3G04420" "AT3G05500" "AT3G06020"
## [260] "AT3G06490" "AT3G06890" "AT3G09600" "AT3G09960" "AT3G10815" "AT3G11210" "AT3G11450"
## [267] "AT3G11480" "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13610"
## [274] "AT3G13730" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870" "AT3G15536" "AT3G15950"
## [281] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17420" "AT3G17510"
## [288] "AT3G17690" "AT3G17860" "AT3G19100" "AT3G19970" "AT3G20250" "AT3G21080" "AT3G21320"
## [295] "AT3G21500" "AT3G21670" "AT3G21700" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G24518"
## [302] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25890" "AT3G26440" "AT3G26470"
## [309] "AT3G27170" "AT3G27415" "AT3G27416" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510"
## [316] "AT3G28580" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G46658" "AT3G46660" "AT3G47420"
## [323] "AT3G47480" "AT3G47730" "AT3G48090" "AT3G48100" "AT3G48115" "AT3G48520" "AT3G48580"
## [330] "AT3G48630" "AT3G48700" "AT3G48780" "AT3G50770" "AT3G50930" "AT3G51090" "AT3G51670"
## [337] "AT3G51860" "AT3G52430" "AT3G53210" "AT3G54320" "AT3G54366" "AT3G55060" "AT3G55500"
## [344] "AT3G55970" "AT3G56170" "AT3G56260" "AT3G57260" "AT3G57380" "AT3G57460" "AT3G57950"
## [351] "AT3G59750" "AT3G59930" "AT3G60420" "AT3G60470" "AT3G60490" "AT3G60961" "AT3G60966"
## [358] "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61890" "AT3G61930"
## [365] "AT3G63010" "AT3G63380" "AT4G00700" "AT4G01430" "AT4G01535" "AT4G01540" "AT4G02360"
## [372] "AT4G02380" "AT4G02760" "AT4G03460" "AT4G04223" "AT4G04490" "AT4G04500" "AT4G04510"
## [379] "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06744" "AT4G09770" "AT4G10390" "AT4G10500"
## [386] "AT4G11240" "AT4G11350" "AT4G11990" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720"
## [393] "AT4G12735" "AT4G14630" "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G16260"
## [400] "AT4G16350" "AT4G17660" "AT4G17670" "AT4G17730" "AT4G20320" "AT4G21680" "AT4G21790"
## [407] "AT4G22070" "AT4G23150" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G25390" "AT4G25433"
## [414] "AT4G26080" "AT4G26120" "AT4G26470" "AT4G27590" "AT4G27860" "AT4G27870" "AT4G29380"
## [421] "AT4G29740" "AT4G29930" "AT4G30180" "AT4G32920" "AT4G33150" "AT4G34200" "AT4G34650"
## [428] "AT4G35600" "AT4G35720" "AT4G36010" "AT4G36430" "AT4G36640" "AT4G36780" "AT4G36950"
## [435] "AT4G37850" "AT4G37900" "AT4G38560" "AT4G39030" "AT4G39190" "AT4G39950" "AT5G01840"
## [442] "AT5G01850" "AT5G02100" "AT5G02170" "AT5G03210" "AT5G03435" "AT5G03668" "AT5G03670"
## [449] "AT5G03680" "AT5G04860" "AT5G04950" "AT5G05680" "AT5G06110" "AT5G06610" "AT5G07650"
## [456] "AT5G08620" "AT5G10380" "AT5G11210" "AT5G11390" "AT5G11870" "AT5G13210" "AT5G13220"
## [463] "AT5G13320" "AT5G13820" "AT5G14090" "AT5G14390" "AT5G14700" "AT5G14760" "AT5G15190"
## [470] "AT5G16170" "AT5G16360" "AT5G17330" "AT5G17490" "AT5G17760" "AT5G19110" "AT5G20700"
## [477] "AT5G20960" "AT5G21280" "AT5G21950" "AT5G22540" "AT5G22545" "AT5G22630" "AT5G23160"
## [484] "AT5G23380" "AT5G23590" "AT5G24090" "AT5G24200" "AT5G24240" "AT5G24280" "AT5G24290"
## [491] "AT5G24910" "AT5G26170" "AT5G26270" "AT5G26920" "AT5G28919" "AT5G28920" "AT5G33355"
## [498] "AT5G38130" "AT5G38250" "AT5G38350" "AT5G39610" "AT5G39670" "AT5G40210" "AT5G41180"
## [505] "AT5G41315" "AT5G41610" "AT5G41612" "AT5G41730" "AT5G42050" "AT5G43170" "AT5G44350"
## [512] "AT5G44380" "AT5G44390" "AT5G44460" "AT5G44990" "AT5G45070" "AT5G45080" "AT5G45090"
## [519] "AT5G45110" "AT5G45630" "AT5G46410" "AT5G46840" "AT5G47960" "AT5G48400" "AT5G48410"
## [526] "AT5G49100" "AT5G49280" "AT5G49560" "AT5G51380" "AT5G52720" "AT5G52730" "AT5G52882"
## [533] "AT5G53290" "AT5G53360" "AT5G54240" "AT5G54700" "AT5G56050" "AT5G56880" "AT5G57320"
## [540] "AT5G58570" "AT5G58620" "AT5G59220" "AT5G59480" "AT5G59580" "AT5G59590" "AT5G59780"
## [547] "AT5G60310" "AT5G60800" "AT5G60890" "AT5G61900" "AT5G61960" "AT5G62150" "AT5G62190"
## [554] "AT5G62480" "AT5G62920" "AT5G63225" "AT5G63450" "AT5G64530" "AT5G64570" "AT5G64572"
## [561] "AT5G64700" "AT5G64810" "AT5G65280" "AT5G65380" "AT5G66052" "AT5G66053" "AT5G66170"
## [568] "AT5G66630" "AT5G66650" "AT5G67080" "AT5G67160" "AT5G67200"
##
## $Down$`A6-V6`
## [1] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" "AT1G12540" "AT1G16370" "AT1G16400"
## [8] "AT1G16410" "AT1G19650" "AT1G19670" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [15] "AT1G28010" "AT1G29280" "AT1G31770" "AT1G34210" "AT1G49520" "AT1G49530" "AT1G51780"
## [22] "AT1G54095" "AT1G63040" "AT1G63570" "AT1G65590" "AT1G66280" "AT1G69370" "AT1G69480"
## [29] "AT1G72140" "AT1G72180" "AT1G72450" "AT1G73210" "AT1G74430" "AT1G74950" "AT1G75540"
## [36] "AT2G01830" "AT2G02990" "AT2G03980" "AT2G06255" "AT2G22200" "AT2G22770" "AT2G22930"
## [43] "AT2G23760" "AT2G25130" "AT2G27228" "AT2G27230" "AT2G30540" "AT2G30820" "AT2G30830"
## [50] "AT2G34010" "AT2G34070" "AT2G35950" "AT2G36350" "AT2G36380" "AT2G36815" "AT2G36830"
## [57] "AT2G37180" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G39250" "AT2G39800" "AT2G40460"
## [64] "AT2G42760" "AT2G47600" "AT2G47950" "AT3G01180" "AT3G02990" "AT3G06020" "AT3G11470"
## [71] "AT3G11480" "AT3G14870" "AT3G15720" "AT3G16460" "AT3G17510" "AT3G17860" "AT3G19100"
## [78] "AT3G21670" "AT3G23910" "AT3G27170" "AT3G27960" "AT3G43270" "AT3G47750" "AT3G48350"
## [85] "AT3G48520" "AT3G54820" "AT3G55290" "AT3G55970" "AT3G56260" "AT3G57780" "AT3G59710"
## [92] "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61890" "AT3G62700" "AT4G03060" "AT4G03400"
## [99] "AT4G10060" "AT4G10390" "AT4G12030" "AT4G15430" "AT4G16740" "AT4G22200" "AT4G23420"
## [106] "AT4G25433" "AT4G25780" "AT4G27870" "AT4G32780" "AT4G36010" "AT4G37850" "AT5G01840"
## [113] "AT5G02260" "AT5G07690" "AT5G11160" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G15190"
## [120] "AT5G17490" "AT5G19110" "AT5G21280" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G26260"
## [127] "AT5G26270" "AT5G27350" "AT5G41120" "AT5G42650" "AT5G44350" "AT5G52120" "AT5G52882"
## [134] "AT5G53290" "AT5G54300" "AT5G57340" "AT5G57800" "AT5G60890" "AT5G61890" "AT5G62470"
## [141] "AT5G62920" "AT5G63450" "AT5G64750" "AT5G65280" "AT5G66052" "AT5G67150" "AT5G67160"
##
## $Down$`M12-A12`
## [1] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390" "AT1G02405"
## [15] "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02660" "AT1G02750" "AT1G03050" "AT1G03180"
## [22] "AT1G03210" "AT1G03290" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03660" "AT1G03850"
## [29] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [36] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05680" "AT1G05835"
## [43] "AT1G05880" "AT1G06180" "AT1G06620" "AT1G06660" "AT1G07000" "AT1G07020" "AT1G07430"
## [50] "AT1G07476" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620" "AT1G07630"
## [57] "AT1G08050" "AT1G08630" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240"
## [64] "AT1G09350" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09794" "AT1G09930" "AT1G09932"
## [71] "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10410" "AT1G10417" "AT1G10520" "AT1G10585"
## [78] "AT1G10690" "AT1G10710" "AT1G11100" "AT1G11330" "AT1G11362" "AT1G11400" "AT1G11480"
## [85] "AT1G11785" "AT1G11905" "AT1G12320" "AT1G12540" "AT1G13310" "AT1G13330" "AT1G13340"
## [92] "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550" "AT1G13990" "AT1G14260"
## [99] "AT1G14330" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15010" "AT1G15040" "AT1G15380"
## [106] "AT1G15405" "AT1G15415" "AT1G15520" "AT1G15670" "AT1G15790" "AT1G15800" "AT1G16150"
## [113] "AT1G16300" "AT1G16420" "AT1G16500" "AT1G16670" "AT1G17020" "AT1G17380" "AT1G17490"
## [120] "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17745" "AT1G17750" "AT1G18570" "AT1G18890"
## [127] "AT1G19020" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19250" "AT1G19270"
## [134] "AT1G19490" "AT1G19640" "AT1G20310" "AT1G20740" "AT1G20780" "AT1G21000" "AT1G21200"
## [141] "AT1G21210" "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21520"
## [148] "AT1G21525" "AT1G21740" "AT1G21930" "AT1G22180" "AT1G22220" "AT1G22280" "AT1G22400"
## [155] "AT1G22403" "AT1G22410" "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22840" "AT1G22985"
## [162] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23560" "AT1G23840" "AT1G23850"
## [169] "AT1G24140" "AT1G24145" "AT1G24147" "AT1G24150" "AT1G25400" "AT1G26130" "AT1G26200"
## [176] "AT1G26290" "AT1G26330" "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26762"
## [183] "AT1G26930" "AT1G27110" "AT1G27300" "AT1G27980" "AT1G28190" "AT1G28360" "AT1G28370"
## [190] "AT1G28480" "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30135"
## [197] "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30473" "AT1G30620" "AT1G30700" "AT1G30755"
## [204] "AT1G30814" "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31290" "AT1G31540"
## [211] "AT1G31550" "AT1G31900" "AT1G32210" "AT1G32350" "AT1G32560" "AT1G32870" "AT1G32910"
## [218] "AT1G32920" "AT1G32940" "AT1G32950" "AT1G32960" "AT1G33030" "AT1G33420" "AT1G33430"
## [225] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420"
## [232] "AT1G34750" "AT1G35210" "AT1G35230" "AT1G35580" "AT1G35710" "AT1G35910" "AT1G36622"
## [239] "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910" "AT1G44130" "AT1G45145" "AT1G47056"
## [246] "AT1G47510" "AT1G48000" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870"
## [253] "AT1G49050" "AT1G49450" "AT1G49900" "AT1G50420" "AT1G50560" "AT1G50740" "AT1G51130"
## [260] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780" "AT1G51790" "AT1G51800" "AT1G51860"
## [267] "AT1G51890" "AT1G52200" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52855"
## [274] "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53620" "AT1G53625" "AT1G53830" "AT1G53920"
## [281] "AT1G54100" "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54890" "AT1G55610" "AT1G55790"
## [288] "AT1G56120" "AT1G56240" "AT1G56242" "AT1G56470" "AT1G56550" "AT1G56650" "AT1G56660"
## [295] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G59590" "AT1G59640" "AT1G59740"
## [302] "AT1G59950" "AT1G60190" "AT1G60420" "AT1G60610" "AT1G60730" "AT1G60890" "AT1G61065"
## [309] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [316] "AT1G61560" "AT1G61800" "AT1G61810" "AT1G61820" "AT1G62300" "AT1G62422" "AT1G62570"
## [323] "AT1G62580" "AT1G62840" "AT1G63245" "AT1G63440" "AT1G63460" "AT1G63720" "AT1G63740"
## [330] "AT1G63820" "AT1G63840" "AT1G64065" "AT1G64610" "AT1G64660" "AT1G65483" "AT1G65490"
## [337] "AT1G65610" "AT1G65690" "AT1G66040" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66410"
## [344] "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66880"
## [351] "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67190" "AT1G67195" "AT1G67360"
## [358] "AT1G67520" "AT1G67635" "AT1G67650" "AT1G67800" "AT1G67810" "AT1G67850" "AT1G67856"
## [365] "AT1G67970" "AT1G67980" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68440" "AT1G68620"
## [372] "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68820" "AT1G69050" "AT1G69260" "AT1G69480"
## [379] "AT1G69490" "AT1G69520" "AT1G69610" "AT1G69720" "AT1G69790" "AT1G69840" "AT1G69880"
## [386] "AT1G69930" "AT1G70220" "AT1G70480" "AT1G70640" "AT1G70690" "AT1G70810" "AT1G71100"
## [393] "AT1G71520" "AT1G71690" "AT1G71697" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125"
## [400] "AT1G72220" "AT1G72240" "AT1G72330" "AT1G72420" "AT1G72540" "AT1G72680" "AT1G72690"
## [407] "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [414] "AT1G72950" "AT1G73010" "AT1G73260" "AT1G73550" "AT1G73805" "AT1G73810" "AT1G73965"
## [421] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74710" "AT1G75170" "AT1G75510"
## [428] "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470" "AT1G76590"
## [435] "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000" "AT1G77145" "AT1G77280"
## [442] "AT1G77500" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78190" "AT1G78260"
## [449] "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78570" "AT1G78780" "AT1G79400" "AT1G79450"
## [456] "AT1G79680" "AT1G79900" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [463] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01540"
## [470] "AT2G01650" "AT2G01818" "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350"
## [477] "AT2G02390" "AT2G02870" "AT2G03270" "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100"
## [484] "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04900" "AT2G05320"
## [491] "AT2G05630" "AT2G05910" "AT2G05940" "AT2G06255" "AT2G07687" "AT2G07688" "AT2G07732"
## [498] "AT2G13790" "AT2G13810" "AT2G13960" "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620"
## [505] "AT2G15400" "AT2G15760" "AT2G15860" "AT2G16060" "AT2G16367" "AT2G16530" "AT2G16700"
## [512] "AT2G16710" "AT2G16720" "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17500"
## [519] "AT2G17720" "AT2G18000" "AT2G18660" "AT2G18690" "AT2G19190" "AT2G19690" "AT2G19710"
## [526] "AT2G19800" "AT2G20110" "AT2G20142" "AT2G20825" "AT2G21188" "AT2G21350" "AT2G21470"
## [533] "AT2G21510" "AT2G21780" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [540] "AT2G22770" "AT2G23030" "AT2G23110" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23680"
## [547] "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24240" "AT2G24285" "AT2G24850" "AT2G25130"
## [554] "AT2G25190" "AT2G25240" "AT2G25260" "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25625"
## [561] "AT2G25737" "AT2G26190" "AT2G26290" "AT2G26300" "AT2G26400" "AT2G26480" "AT2G26530"
## [568] "AT2G26560" "AT2G26750" "AT2G27389" "AT2G27390" "AT2G27430" "AT2G27510" "AT2G27690"
## [575] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28160" "AT2G28400" "AT2G28500" "AT2G28570"
## [582] "AT2G28890" "AT2G29070" "AT2G29110" "AT2G29350" "AT2G29400" "AT2G29460" "AT2G29470"
## [589] "AT2G29480" "AT2G29680" "AT2G29720" "AT2G29750" "AT2G29950" "AT2G29990" "AT2G30080"
## [596] "AT2G30140" "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018"
## [603] "AT2G31020" "AT2G31200" "AT2G31305" "AT2G31390" "AT2G31570" "AT2G31865" "AT2G31870"
## [610] "AT2G31880" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32160" "AT2G32190"
## [617] "AT2G32210" "AT2G32460" "AT2G32510" "AT2G32660" "AT2G32670" "AT2G32680" "AT2G33380"
## [624] "AT2G33520" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580" "AT2G34600" "AT2G34610"
## [631] "AT2G34940" "AT2G35000" "AT2G35070" "AT2G35290" "AT2G35550" "AT2G35730" "AT2G35810"
## [638] "AT2G35940" "AT2G35950" "AT2G36640" "AT2G36854" "AT2G37070" "AT2G37110" "AT2G37440"
## [645] "AT2G37670" "AT2G37750" "AT2G37760" "AT2G37870" "AT2G37980" "AT2G38240" "AT2G38250"
## [652] "AT2G38340" "AT2G38490" "AT2G38790" "AT2G38860" "AT2G39030" "AT2G39050" "AT2G39110"
## [659] "AT2G39210" "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39420" "AT2G39518" "AT2G39520"
## [666] "AT2G39530" "AT2G40095" "AT2G40113" "AT2G40140" "AT2G40330" "AT2G40340" "AT2G40435"
## [673] "AT2G40750" "AT2G41070" "AT2G41090" "AT2G41100" "AT2G41200" "AT2G41342" "AT2G41380"
## [680] "AT2G41410" "AT2G41660" "AT2G41835" "AT2G42060" "AT2G42350" "AT2G42560" "AT2G42950"
## [687] "AT2G43000" "AT2G43040" "AT2G43140" "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43820"
## [694] "AT2G44180" "AT2G44383" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G45170" "AT2G45210"
## [701] "AT2G45220" "AT2G45330" "AT2G45500" "AT2G45570" "AT2G45660" "AT2G45695" "AT2G45760"
## [708] "AT2G45770" "AT2G46040" "AT2G46270" "AT2G46380" "AT2G46400" "AT2G46430" "AT2G46440"
## [715] "AT2G46510" "AT2G46620" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46940" "AT2G46980"
## [722] "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47190" "AT2G47200" "AT2G47560" "AT2G47640"
## [729] "AT2G47720" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01080" "AT3G01290" "AT3G01830"
## [736] "AT3G01840" "AT3G01970" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02190" "AT3G02770"
## [743] "AT3G02800" "AT3G03310" "AT3G03341" "AT3G03440" "AT3G03450" "AT3G03460" "AT3G03470"
## [750] "AT3G03490" "AT3G03560" "AT3G03610" "AT3G03650" "AT3G03700" "AT3G03702" "AT3G04000"
## [757] "AT3G04060" "AT3G04070" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04620" "AT3G04640"
## [764] "AT3G05330" "AT3G05360" "AT3G05390" "AT3G05500" "AT3G05830" "AT3G05870" "AT3G06320"
## [771] "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06890" "AT3G07195" "AT3G07370" "AT3G07600"
## [778] "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720" "AT3G08760" "AT3G08870" "AT3G08990"
## [785] "AT3G09270" "AT3G09280" "AT3G09490" "AT3G09830" "AT3G09910" "AT3G09940" "AT3G09960"
## [792] "AT3G10010" "AT3G10310" "AT3G10320" "AT3G10420" "AT3G10490" "AT3G10500" "AT3G10640"
## [799] "AT3G10815" "AT3G11000" "AT3G11010" "AT3G11040" "AT3G11080" "AT3G11150" "AT3G11330"
## [806] "AT3G11340" "AT3G11480" "AT3G11580" "AT3G11820" "AT3G11840" "AT3G12040" "AT3G12220"
## [813] "AT3G12230" "AT3G12320" "AT3G12510" "AT3G12760" "AT3G12830" "AT3G13080" "AT3G13090"
## [820] "AT3G13100" "AT3G13235" "AT3G13380" "AT3G13430" "AT3G13432" "AT3G13520" "AT3G13610"
## [827] "AT3G13730" "AT3G13782" "AT3G13900" "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060"
## [834] "AT3G14130" "AT3G14280" "AT3G14430" "AT3G14440" "AT3G14470" "AT3G14475" "AT3G14560"
## [841] "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14840" "AT3G15355" "AT3G15500"
## [848] "AT3G15518" "AT3G15534" "AT3G15536" "AT3G15760" "AT3G15770" "AT3G16150" "AT3G16330"
## [855] "AT3G16565" "AT3G16980" "AT3G16990" "AT3G17000" "AT3G17380" "AT3G17420" "AT3G17609"
## [862] "AT3G17690" "AT3G17790" "AT3G17800" "AT3G17810" "AT3G17820" "AT3G18240" "AT3G18250"
## [869] "AT3G18260" "AT3G18560" "AT3G19010" "AT3G19270" "AT3G19390" "AT3G19580" "AT3G19615"
## [876] "AT3G19660" "AT3G19910" "AT3G19970" "AT3G20340" "AT3G21080" "AT3G21150" "AT3G21230"
## [883] "AT3G21295" "AT3G21320" "AT3G21520" "AT3G21700" "AT3G21810" "AT3G22160" "AT3G22235"
## [890] "AT3G22370" "AT3G22400" "AT3G22560" "AT3G22600" "AT3G22840" "AT3G22910" "AT3G22961"
## [897] "AT3G23120" "AT3G23240" "AT3G24320" "AT3G24460" "AT3G25010" "AT3G25020" "AT3G25250"
## [904] "AT3G25290" "AT3G25400" "AT3G25510" "AT3G25870" "AT3G25882" "AT3G26090" "AT3G26210"
## [911] "AT3G26220" "AT3G26440" "AT3G26460" "AT3G26470" "AT3G26500" "AT3G26600" "AT3G26690"
## [918] "AT3G26830" "AT3G26840" "AT3G27210" "AT3G27290" "AT3G27415" "AT3G27416" "AT3G27809"
## [925] "AT3G27810" "AT3G28007" "AT3G28210" "AT3G28340" "AT3G28480" "AT3G28510" "AT3G28540"
## [932] "AT3G28570" "AT3G28580" "AT3G28600" "AT3G28850" "AT3G28890" "AT3G28930" "AT3G29240"
## [939] "AT3G29250" "AT3G29575" "AT3G30775" "AT3G41768" "AT3G43250" "AT3G44300" "AT3G44326"
## [946] "AT3G44350" "AT3G44400" "AT3G44490" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [953] "AT3G45130" "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46280"
## [960] "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46690" "AT3G46930" "AT3G47090" "AT3G47340"
## [967] "AT3G47480" "AT3G47490" "AT3G47530" "AT3G47540" "AT3G47780" "AT3G48020" "AT3G48080"
## [974] "AT3G48090" "AT3G48240" "AT3G48390" "AT3G48490" "AT3G48520" "AT3G48570" "AT3G48580"
## [981] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48700" "AT3G48770" "AT3G48850" "AT3G49110"
## [988] "AT3G49120" "AT3G49130" "AT3G49540" "AT3G49580" "AT3G49645" "AT3G50260" "AT3G50280"
## [995] "AT3G50310" "AT3G50470" "AT3G50480" "AT3G50550" "AT3G50760" "AT3G50770"
## [ reached getOption("max.print") -- omitted 812 entries ]
##
## $Down$`M12-V12`
## [1] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02750" "AT1G03050" "AT1G04310"
## [22] "AT1G04490" "AT1G04570" "AT1G04700" "AT1G04780" "AT1G05100" "AT1G05680" "AT1G05690"
## [29] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06180" "AT1G06570" "AT1G06620"
## [36] "AT1G07150" "AT1G07430" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07670"
## [43] "AT1G08050" "AT1G08860" "AT1G08920" "AT1G09180" "AT1G09240" "AT1G09350" "AT1G09530"
## [50] "AT1G09950" "AT1G10230" "AT1G10340" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [57] "AT1G10586" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G11185" "AT1G11400" "AT1G11480"
## [64] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12540" "AT1G13280" "AT1G13310" "AT1G13330"
## [71] "AT1G13340" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14120" "AT1G14260"
## [78] "AT1G15010" "AT1G15100" "AT1G15110" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [85] "AT1G15430" "AT1G15520" "AT1G15670" "AT1G16300" "AT1G16850" "AT1G17380" "AT1G17420"
## [92] "AT1G17500" "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G19160"
## [99] "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19490" "AT1G19570" "AT1G19640"
## [106] "AT1G19650" "AT1G19670" "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310"
## [113] "AT1G20440" "AT1G20450" "AT1G20970" "AT1G21000" "AT1G21410" "AT1G21520" "AT1G21525"
## [120] "AT1G21550" "AT1G22220" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490" "AT1G22770"
## [127] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23850" "AT1G24090" "AT1G24145"
## [134] "AT1G24147" "AT1G24210" "AT1G24600" "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500"
## [141] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26920" "AT1G26930" "AT1G26960"
## [148] "AT1G27110" "AT1G27300" "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050"
## [155] "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29050" "AT1G29195" "AT1G29290" "AT1G29330"
## [162] "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320"
## [169] "AT1G30620" "AT1G30814" "AT1G30850" "AT1G31120" "AT1G31290" "AT1G31550" "AT1G31900"
## [176] "AT1G32560" "AT1G32640" "AT1G32730" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33110"
## [183] "AT1G33260" "AT1G34180" "AT1G34420" "AT1G35210" "AT1G42980" "AT1G43160" "AT1G43245"
## [190] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G45145" "AT1G47510" "AT1G48000"
## [197] "AT1G48100" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G49050" "AT1G49450" "AT1G49520"
## [204] "AT1G50260" "AT1G50640" "AT1G51140" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G52030"
## [211] "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52760" "AT1G52770"
## [218] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53320" "AT1G53470" "AT1G53560"
## [225] "AT1G53620" "AT1G53625" "AT1G53760" "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100"
## [232] "AT1G54120" "AT1G54130" "AT1G54570" "AT1G54890" "AT1G55610" "AT1G56580" "AT1G57560"
## [239] "AT1G57610" "AT1G57630" "AT1G57650" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740"
## [246] "AT1G59950" "AT1G60190" "AT1G60270" "AT1G61065" "AT1G61110" "AT1G61120" "AT1G61140"
## [253] "AT1G61215" "AT1G61255" "AT1G61260" "AT1G61340" "AT1G61610" "AT1G61640" "AT1G61890"
## [260] "AT1G62840" "AT1G63245" "AT1G63720" "AT1G64380" "AT1G64610" "AT1G64620" "AT1G64660"
## [267] "AT1G64670" "AT1G65610" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66550" "AT1G66590"
## [274] "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G67070" "AT1G67420" "AT1G68200"
## [281] "AT1G68250" "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68620" "AT1G69260"
## [288] "AT1G69360" "AT1G69480" "AT1G69600" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69870"
## [295] "AT1G69930" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [302] "AT1G70800" "AT1G70810" "AT1G71100" "AT1G71690" "AT1G71697" "AT1G72120" "AT1G72210"
## [309] "AT1G72240" "AT1G72330" "AT1G72450" "AT1G72520" "AT1G72680" "AT1G72690" "AT1G72700"
## [316] "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010"
## [323] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73965"
## [330] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74710" "AT1G74950" "AT1G75020" "AT1G75220"
## [337] "AT1G75370" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580" "AT1G76040" "AT1G76062"
## [344] "AT1G76070" "AT1G76180" "AT1G76240" "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650"
## [351] "AT1G76760" "AT1G76790" "AT1G76980" "AT1G77200" "AT1G77280" "AT1G77450" "AT1G77500"
## [358] "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890" "AT1G78070" "AT1G78080" "AT1G78190"
## [365] "AT1G78210" "AT1G78380" "AT1G78570" "AT1G78940" "AT1G79170" "AT1G79270" "AT1G79400"
## [372] "AT1G79520" "AT1G79570" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [379] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80820" "AT1G80840" "AT1G80850" "AT2G01340"
## [386] "AT2G01450" "AT2G01890" "AT2G02310" "AT2G02340" "AT2G02870" "AT2G03470" "AT2G03760"
## [393] "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450" "AT2G05260" "AT2G05940" "AT2G06050"
## [400] "AT2G06255" "AT2G13650" "AT2G13960" "AT2G14290" "AT2G15760" "AT2G16720" "AT2G17500"
## [407] "AT2G17720" "AT2G18090" "AT2G18196" "AT2G18690" "AT2G18917" "AT2G20110" "AT2G20142"
## [414] "AT2G20825" "AT2G20880" "AT2G21188" "AT2G21350" "AT2G21640" "AT2G21780" "AT2G22200"
## [421] "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22860" "AT2G23030" "AT2G23110"
## [428] "AT2G23340" "AT2G23450" "AT2G23760" "AT2G23810" "AT2G24210" "AT2G24285" "AT2G24850"
## [435] "AT2G25130" "AT2G25240" "AT2G25460" "AT2G25625" "AT2G26480" "AT2G26530" "AT2G27310"
## [442] "AT2G27500" "AT2G27505" "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28200" "AT2G28400"
## [449] "AT2G28570" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470" "AT2G29670" "AT2G30020"
## [456] "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395" "AT2G30400" "AT2G30540"
## [463] "AT2G30550" "AT2G30720" "AT2G30750" "AT2G30820" "AT2G30830" "AT2G31180" "AT2G31380"
## [470] "AT2G31940" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32210" "AT2G32235"
## [477] "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33380" "AT2G34010" "AT2G34070"
## [484] "AT2G34080" "AT2G34500" "AT2G34600" "AT2G34810" "AT2G35290" "AT2G35550" "AT2G35700"
## [491] "AT2G35710" "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36080" "AT2G36380"
## [498] "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854" "AT2G37040" "AT2G37170"
## [505] "AT2G37180" "AT2G37440" "AT2G37590" "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870"
## [512] "AT2G37980" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530"
## [519] "AT2G38640" "AT2G38750" "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39210" "AT2G39250"
## [526] "AT2G39350" "AT2G39520" "AT2G39725" "AT2G39800" "AT2G39980" "AT2G40140" "AT2G40340"
## [533] "AT2G40435" "AT2G40620" "AT2G40750" "AT2G41070" "AT2G41410" "AT2G41540" "AT2G41660"
## [540] "AT2G41730" "AT2G41835" "AT2G41870" "AT2G42150" "AT2G42350" "AT2G42530" "AT2G42540"
## [547] "AT2G42560" "AT2G42760" "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43320" "AT2G43535"
## [554] "AT2G43550" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44810" "AT2G44840" "AT2G44940"
## [561] "AT2G45210" "AT2G45760" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [568] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [575] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47560" "AT2G47670" "AT2G47770"
## [582] "AT2G47780" "AT2G47950" "AT3G01280" "AT3G01290" "AT3G01830" "AT3G01840" "AT3G02140"
## [589] "AT3G02150" "AT3G02160" "AT3G02510" "AT3G02875" "AT3G02990" "AT3G03310" "AT3G03440"
## [596] "AT3G03650" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060" "AT3G04181" "AT3G04420"
## [603] "AT3G04630" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05800"
## [610] "AT3G05810" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06420" "AT3G06490" "AT3G06500"
## [617] "AT3G06890" "AT3G07340" "AT3G07350" "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720"
## [624] "AT3G08990" "AT3G09032" "AT3G09280" "AT3G09370" "AT3G09450" "AT3G09830" "AT3G09910"
## [631] "AT3G09940" "AT3G10815" "AT3G10985" "AT3G11150" "AT3G11170" "AT3G11210" "AT3G11330"
## [638] "AT3G11340" "AT3G11410" "AT3G11420" "AT3G11450" "AT3G11470" "AT3G11480" "AT3G11580"
## [645] "AT3G11840" "AT3G12320" "AT3G12830" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13432"
## [652] "AT3G13610" "AT3G13730" "AT3G13910" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14560"
## [659] "AT3G14840" "AT3G14870" "AT3G15210" "AT3G15500" "AT3G15534" "AT3G15760" "AT3G15990"
## [666] "AT3G16150" "AT3G16320" "AT3G16330" "AT3G16400" "AT3G16450" "AT3G16460" "AT3G16500"
## [673] "AT3G16620" "AT3G16990" "AT3G17000" "AT3G17120" "AT3G17380" "AT3G17510" "AT3G17520"
## [680] "AT3G17609" "AT3G17690" "AT3G17800" "AT3G17810" "AT3G17860" "AT3G17910" "AT3G18295"
## [687] "AT3G18560" "AT3G19270" "AT3G19580" "AT3G19970" "AT3G21080" "AT3G21230" "AT3G21660"
## [694] "AT3G21670" "AT3G21700" "AT3G21890" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G22370"
## [701] "AT3G22415" "AT3G22550" "AT3G22560" "AT3G22660" "AT3G22890" "AT3G22910" "AT3G24420"
## [708] "AT3G24518" "AT3G24520" "AT3G25250" "AT3G25570" "AT3G25572" "AT3G25760" "AT3G25770"
## [715] "AT3G25780" "AT3G25870" "AT3G25882" "AT3G25890" "AT3G25910" "AT3G26460" "AT3G26690"
## [722] "AT3G26830" "AT3G26840" "AT3G27170" "AT3G27210" "AT3G27415" "AT3G27416" "AT3G27809"
## [729] "AT3G27810" "AT3G27870" "AT3G27960" "AT3G28007" "AT3G28210" "AT3G28220" "AT3G28580"
## [736] "AT3G28600" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G30380" "AT3G41979" "AT3G43250"
## [743] "AT3G43270" "AT3G43440" "AT3G44326" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [750] "AT3G44870" "AT3G45040" "AT3G45130" "AT3G45140" "AT3G45638" "AT3G46080" "AT3G46510"
## [757] "AT3G46640" "AT3G46650" "AT3G46658" "AT3G46660" "AT3G46668" "AT3G46670" "AT3G46690"
## [764] "AT3G47340" "AT3G47420" "AT3G47500" "AT3G47540" "AT3G47730" "AT3G47750" "AT3G47960"
## [771] "AT3G48080" "AT3G48240" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520"
## [778] "AT3G48530" "AT3G48660" "AT3G48870" "AT3G49400" "AT3G49870" "AT3G50260" "AT3G50310"
## [785] "AT3G50410" "AT3G50470" "AT3G50570" "AT3G50620" "AT3G50650" "AT3G50760" "AT3G50770"
## [792] "AT3G50800" "AT3G50910" "AT3G50930" "AT3G50970" "AT3G51090" "AT3G51450" "AT3G52100"
## [799] "AT3G52290" "AT3G52310" "AT3G52430" "AT3G52470" "AT3G52540" "AT3G52740" "AT3G52770"
## [806] "AT3G52870" "AT3G53230" "AT3G53232" "AT3G53600" "AT3G54320" "AT3G54820" "AT3G54950"
## [813] "AT3G55060" "AT3G55110" "AT3G55290" "AT3G55500" "AT3G55640" "AT3G55880" "AT3G55970"
## [820] "AT3G56260" "AT3G56275" "AT3G56400" "AT3G56620" "AT3G56710" "AT3G56891" "AT3G57010"
## [827] "AT3G57020" "AT3G57157" "AT3G57380" "AT3G57450" "AT3G57460" "AT3G57480" "AT3G57520"
## [834] "AT3G57540" "AT3G57760" "AT3G57880" "AT3G57950" "AT3G58795" "AT3G59050" "AT3G59052"
## [841] "AT3G59710" "AT3G59800" "AT3G59900" "AT3G59940" "AT3G60160" "AT3G60180" "AT3G60420"
## [848] "AT3G60450" "AT3G60490" "AT3G60961" "AT3G60966" "AT3G61113" "AT3G61185" "AT3G61190"
## [855] "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61630" "AT3G61890" "AT3G61900"
## [862] "AT3G61920" "AT3G61930" "AT3G62760" "AT3G63010" "AT3G63060" "AT3G63380" "AT4G00430"
## [869] "AT4G01026" "AT4G01030" "AT4G01360" "AT4G01535" "AT4G01540" "AT4G01850" "AT4G01895"
## [876] "AT4G02220" "AT4G02320" "AT4G02360" "AT4G02380" "AT4G02850" "AT4G03320" "AT4G04223"
## [883] "AT4G05010" "AT4G05020" "AT4G05030" "AT4G05100" "AT4G05497" "AT4G06534" "AT4G06744"
## [890] "AT4G07950" "AT4G08170" "AT4G08555" "AT4G08870" "AT4G09460" "AT4G10290" "AT4G10390"
## [897] "AT4G11140" "AT4G11690" "AT4G11890" "AT4G11911" "AT4G12000" "AT4G12005" "AT4G12040"
## [904] "AT4G12410" "AT4G12710" "AT4G12720" "AT4G12735" "AT4G13110" "AT4G13860" "AT4G14365"
## [911] "AT4G15100" "AT4G15200" "AT4G15230" "AT4G15248" "AT4G15280" "AT4G15660" "AT4G15670"
## [918] "AT4G15680" "AT4G15690" "AT4G15700" "AT4G15770" "AT4G15940" "AT4G15990" "AT4G16000"
## [925] "AT4G16680" "AT4G16690" "AT4G16730" "AT4G16740" "AT4G16760" "AT4G16820" "AT4G17230"
## [932] "AT4G17240" "AT4G18160" "AT4G18170" "AT4G18360" "AT4G18440" "AT4G18950" "AT4G20830"
## [939] "AT4G20970" "AT4G21060" "AT4G21120" "AT4G21200" "AT4G21215" "AT4G21390" "AT4G21440"
## [946] "AT4G21570" "AT4G21680" "AT4G21780" "AT4G21790" "AT4G21830" "AT4G21850" "AT4G22070"
## [953] "AT4G22590" "AT4G22592" "AT4G22620" "AT4G22758" "AT4G23050" "AT4G23060" "AT4G23420"
## [960] "AT4G23450" "AT4G23600" "AT4G23680" "AT4G24010" "AT4G24026" "AT4G24030" "AT4G24040"
## [967] "AT4G24110" "AT4G24340" "AT4G24380" "AT4G24960" "AT4G25390" "AT4G25433" "AT4G25480"
## [974] "AT4G25670" "AT4G25672" "AT4G25690" "AT4G25692" "AT4G26060" "AT4G26070" "AT4G26080"
## [981] "AT4G26120" "AT4G26470" "AT4G26810" "AT4G27140" "AT4G27350" "AT4G27410" "AT4G27530"
## [988] "AT4G27590" "AT4G27830" "AT4G27860" "AT4G27870" "AT4G28085" "AT4G28088" "AT4G28140"
## [995] "AT4G28150" "AT4G28290" "AT4G28300" "AT4G29740" "AT4G29930" "AT4G29950"
## [ reached getOption("max.print") -- omitted 430 entries ]
##
## $Down$`A12-V12`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" "AT1G01610" "AT1G01620" "AT1G01720"
## [8] "AT1G01900" "AT1G02205" "AT1G02400" "AT1G02405" "AT1G02460" "AT1G03020" "AT1G04220"
## [15] "AT1G07150" "AT1G07610" "AT1G08200" "AT1G09530" "AT1G09950" "AT1G10370" "AT1G10530"
## [22] "AT1G10560" "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12420" "AT1G13740"
## [29] "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G15080" "AT1G15100" "AT1G15170"
## [36] "AT1G15180" "AT1G15670" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17420" "AT1G17940"
## [43] "AT1G19570" "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030"
## [50] "AT1G20070" "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G22550" "AT1G22770"
## [57] "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27030" "AT1G27640" "AT1G27730" "AT1G28010" "AT1G28050" "AT1G28360" "AT1G29330"
## [71] "AT1G30240" "AT1G31710" "AT1G32860" "AT1G32910" "AT1G34210" "AT1G43160" "AT1G44350"
## [78] "AT1G48100" "AT1G49450" "AT1G49650" "AT1G50640" "AT1G51090" "AT1G51500" "AT1G51780"
## [85] "AT1G52030" "AT1G52720" "AT1G53170" "AT1G54010" "AT1G54030" "AT1G54040" "AT1G54095"
## [92] "AT1G55260" "AT1G55490" "AT1G56580" "AT1G58270" "AT1G59740" "AT1G60190" "AT1G60270"
## [99] "AT1G61110" "AT1G61340" "AT1G62440" "AT1G62975" "AT1G63040" "AT1G64150" "AT1G64380"
## [106] "AT1G64390" "AT1G64620" "AT1G64670" "AT1G65860" "AT1G66280" "AT1G67420" "AT1G68350"
## [113] "AT1G68500" "AT1G69140" "AT1G69295" "AT1G69530" "AT1G69600" "AT1G69870" "AT1G70300"
## [120] "AT1G70640" "AT1G70700" "AT1G72040" "AT1G72140" "AT1G72180" "AT1G73210" "AT1G73390"
## [127] "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74950" "AT1G75370" "AT1G75580"
## [134] "AT1G75800" "AT1G76610" "AT1G76790" "AT1G77680" "AT1G78060" "AT1G78070" "AT1G78080"
## [141] "AT1G79170" "AT1G79570" "AT1G80060" "AT1G80120" "AT1G80530" "AT1G80580" "AT1G80820"
## [148] "AT1G80840" "AT1G80850" "AT2G01830" "AT2G01890" "AT2G03760" "AT2G04080" "AT2G06050"
## [155] "AT2G06255" "AT2G16630" "AT2G17450" "AT2G18969" "AT2G18970" "AT2G20880" "AT2G21140"
## [162] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23340" "AT2G23760"
## [169] "AT2G24210" "AT2G25130" "AT2G27510" "AT2G27820" "AT2G27830" "AT2G28790" "AT2G29440"
## [176] "AT2G29450" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G30040" "AT2G30360" "AT2G30362"
## [183] "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31380" "AT2G32235" "AT2G32240" "AT2G32510"
## [190] "AT2G32990" "AT2G33380" "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960"
## [197] "AT2G36380" "AT2G36590" "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885"
## [204] "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G38530"
## [211] "AT2G38540" "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39980" "AT2G40620"
## [218] "AT2G41170" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [225] "AT2G43018" "AT2G43020" "AT2G43535" "AT2G43550" "AT2G44578" "AT2G44640" "AT2G44840"
## [232] "AT2G45470" "AT2G45960" "AT2G46370" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [239] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G03190" "AT3G03780"
## [246] "AT3G03980" "AT3G04000" "AT3G04010" "AT3G04630" "AT3G05640" "AT3G05800" "AT3G05810"
## [253] "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G08030" "AT3G08670"
## [260] "AT3G09032" "AT3G09940" "AT3G10985" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [267] "AT3G12120" "AT3G12145" "AT3G12920" "AT3G13230" "AT3G14067" "AT3G14870" "AT3G15210"
## [274] "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450" "AT3G16460" "AT3G16500"
## [281] "AT3G17120" "AT3G17510" "AT3G17860" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G21670"
## [288] "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22560" "AT3G23810" "AT3G24518" "AT3G24520"
## [295] "AT3G25700" "AT3G25760" "AT3G25770" "AT3G25780" "AT3G26060" "AT3G26520" "AT3G27170"
## [302] "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28600" "AT3G43250" "AT3G43270" "AT3G44870"
## [309] "AT3G45140" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47960" "AT3G48350"
## [316] "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520" "AT3G48720" "AT3G49870" "AT3G50260"
## [323] "AT3G50410" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G52290" "AT3G53370" "AT3G53420"
## [330] "AT3G54820" "AT3G54830" "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260"
## [337] "AT3G56270" "AT3G57020" "AT3G57157" "AT3G57760" "AT3G59050" "AT3G59052" "AT3G59710"
## [344] "AT3G59940" "AT3G59970" "AT3G60220" "AT3G60490" "AT3G61420" "AT3G61430" "AT3G61490"
## [351] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62700" "AT3G62860" "AT3G63200" "AT4G00360"
## [358] "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030" "AT4G02360" "AT4G04840" "AT4G05010"
## [365] "AT4G05020" "AT4G05100" "AT4G06534" "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08870"
## [372] "AT4G10290" "AT4G10390" "AT4G11320" "AT4G12000" "AT4G12005" "AT4G12030" "AT4G12410"
## [379] "AT4G13770" "AT4G13860" "AT4G14040" "AT4G14440" "AT4G15100" "AT4G15210" "AT4G15770"
## [386] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G18440"
## [393] "AT4G21060" "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21780" "AT4G21790" "AT4G22010"
## [400] "AT4G22620" "AT4G23060" "AT4G23420" "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960"
## [407] "AT4G24972" "AT4G25433" "AT4G25700" "AT4G25830" "AT4G26700" "AT4G27350" "AT4G27410"
## [414] "AT4G27520" "AT4G27590" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G29740" "AT4G30180"
## [421] "AT4G30210" "AT4G30440" "AT4G30530" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780"
## [428] "AT4G32785" "AT4G33220" "AT4G33467" "AT4G33970" "AT4G34200" "AT4G34290" "AT4G34650"
## [435] "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320" "AT4G35480" "AT4G35550" "AT4G35560"
## [442] "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36780" "AT4G36900" "AT4G37409" "AT4G37410"
## [449] "AT4G37760" "AT4G37990" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810" "AT4G39330"
## [456] "AT4G39350" "AT4G39980" "AT5G01210" "AT5G01215" "AT5G01760" "AT5G01840" "AT5G02170"
## [463] "AT5G02460" "AT5G03030" "AT5G04200" "AT5G04250" "AT5G04530" "AT5G04770" "AT5G05440"
## [470] "AT5G06570" "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07690" "AT5G07700" "AT5G08640"
## [477] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10720" "AT5G12860" "AT5G13220" "AT5G13400"
## [484] "AT5G14200" "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240"
## [491] "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17460" "AT5G17490" "AT5G17520"
## [498] "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20740" "AT5G21280" "AT5G22500"
## [505] "AT5G22740" "AT5G23010" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155"
## [512] "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780" "AT5G24920" "AT5G26260"
## [519] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G38005" "AT5G38120" "AT5G38130" "AT5G39320"
## [526] "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G41120" "AT5G41315" "AT5G41590"
## [533] "AT5G41600" "AT5G42650" "AT5G42900" "AT5G43170" "AT5G44050" "AT5G44210" "AT5G44420"
## [540] "AT5G45950" "AT5G47240" "AT5G47330" "AT5G52050" "AT5G52310" "AT5G52882" "AT5G53200"
## [547] "AT5G53760" "AT5G54300" "AT5G55090" "AT5G55180" "AT5G55530" "AT5G56760" "AT5G56880"
## [554] "AT5G57100" "AT5G57260" "AT5G57800" "AT5G58480" "AT5G58900" "AT5G59030" "AT5G59050"
## [561] "AT5G59080" "AT5G59090" "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59760" "AT5G60850"
## [568] "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [575] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63450" "AT5G64170"
## [582] "AT5G64260" "AT5G64280" "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280"
## [589] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66590" "AT5G66650" "AT5G67070" "AT5G67180"
## [596] "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"
##
##
## $Summary
## Comparisons Counts_Up_or_Down Counts_Up Counts_Down
## M1-A1 M1-A1 24 2 22
## M1-V1 M1-V1 1059 615 444
## A1-V1 A1-V1 50 29 21
## M6-A6 M6-A6 2373 1030 1343
## M6-V6 M6-V6 1311 739 572
## A6-V6 A6-V6 539 392 147
## M12-A12 M12-A12 3203 1391 1812
## M12-V12 M12-V12 2228 798 1430
## A12-V12 A12-V12 988 388 600up_down <- DEG_list$UporDown; names(up_down) <- paste(names(up_down), "_up_down", sep="")
str(up_down) # list of up_down's for 9 CMP's## List of 9
## $ M1-A1_up_down : chr [1:24] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## $ M1-V1_up_down : chr [1:1059] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## $ A1-V1_up_down : chr [1:50] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" ...
## $ M6-A6_up_down : chr [1:2373] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" ...
## $ M6-V6_up_down : chr [1:1311] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" ...
## $ A6-V6_up_down : chr [1:539] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## $ M12-A12_up_down: chr [1:3203] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" ...
## $ M12-V12_up_down: chr [1:2228] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" ...
## $ A12-V12_up_down: chr [1:988] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" ...up_down## $`M1-A1_up_down`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT3G21870" "AT4G12480" "AT4G18540" "AT4G23550"
## [17] "AT4G33980" "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100" "ATCG01310"
##
## $`M1-V1_up_down`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G01640" "AT1G02710" "AT1G02820" "AT1G02920" "AT1G02930" "AT1G03050" "AT1G03055"
## [15] "AT1G03300" "AT1G03360" "AT1G03905" "AT1G04220" "AT1G04250" "AT1G04280" "AT1G04530"
## [22] "AT1G04550" "AT1G04620" "AT1G04660" "AT1G04770" "AT1G04990" "AT1G05020" "AT1G05300"
## [29] "AT1G05560" "AT1G05562" "AT1G05680" "AT1G05710" "AT1G06460" "AT1G07010" "AT1G07040"
## [36] "AT1G07050" "AT1G07160" "AT1G07180" "AT1G07420" "AT1G07485" "AT1G07490" "AT1G08610"
## [43] "AT1G08980" "AT1G09180" "AT1G09820" "AT1G09900" "AT1G10040" "AT1G10070" "AT1G10200"
## [50] "AT1G10460" "AT1G10710" "AT1G10960" "AT1G10990" "AT1G11200" "AT1G11362" "AT1G11925"
## [57] "AT1G11950" "AT1G12330" "AT1G12370" "AT1G12710" "AT1G12730" "AT1G13030" "AT1G13080"
## [64] "AT1G13110" "AT1G13270" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150"
## [71] "AT1G14170" "AT1G14345" "AT1G14540" "AT1G14840" "AT1G14870" "AT1G15125" "AT1G15290"
## [78] "AT1G15510" "AT1G15550" "AT1G15670" "AT1G15870" "AT1G15890" "AT1G16090" "AT1G16350"
## [85] "AT1G16390" "AT1G16730" "AT1G17050" "AT1G17665" "AT1G18800" "AT1G19130" "AT1G19140"
## [92] "AT1G19150" "AT1G19370" "AT1G19450" "AT1G19700" "AT1G20010" "AT1G20620" "AT1G20630"
## [99] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G21500" "AT1G22180"
## [106] "AT1G22370" "AT1G22480" "AT1G22490" "AT1G22590" "AT1G22770" "AT1G22850" "AT1G23100"
## [113] "AT1G23410" "AT1G23740" "AT1G24148" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26220"
## [120] "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26420" "AT1G26665" "AT1G26761" "AT1G27020"
## [127] "AT1G27120" "AT1G27480" "AT1G27630" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G29160"
## [134] "AT1G29600" "AT1G29660" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700"
## [141] "AT1G30755" "AT1G30960" "AT1G31690" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760"
## [148] "AT1G32900" "AT1G33030" "AT1G33170" "AT1G33410" "AT1G34380" "AT1G42550" "AT1G42970"
## [155] "AT1G44000" "AT1G44446" "AT1G48100" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48480"
## [162] "AT1G48570" "AT1G48605" "AT1G49010" "AT1G49230" "AT1G49430" "AT1G49490" "AT1G49660"
## [169] "AT1G49720" "AT1G50840" "AT1G51080" "AT1G51100" "AT1G51310" "AT1G51610" "AT1G51620"
## [176] "AT1G51850" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52200" "AT1G52830" "AT1G53035"
## [183] "AT1G53090" "AT1G53100" "AT1G53625" "AT1G54500" "AT1G55260" "AT1G55450" "AT1G55960"
## [190] "AT1G56140" "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G58520"
## [197] "AT1G59700" "AT1G59950" "AT1G60730" "AT1G61300" "AT1G61360" "AT1G61420" "AT1G61550"
## [204] "AT1G61560" "AT1G62170" "AT1G62180" "AT1G62630" "AT1G62720" "AT1G62750" "AT1G62760"
## [211] "AT1G62960" "AT1G63180" "AT1G63250" "AT1G64110" "AT1G64220" "AT1G64500" "AT1G64600"
## [218] "AT1G64670" "AT1G64680" "AT1G64760" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [225] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65820" "AT1G65920"
## [232] "AT1G66130" "AT1G66330" "AT1G66540" "AT1G66700" "AT1G66725" "AT1G66780" "AT1G66840"
## [239] "AT1G67370" "AT1G67590" "AT1G67750" "AT1G67970" "AT1G67980" "AT1G68050" "AT1G68440"
## [246] "AT1G69200" "AT1G69520" "AT1G70000" "AT1G70220" "AT1G70250" "AT1G70580" "AT1G70800"
## [253] "AT1G71000" "AT1G71400" "AT1G71520" "AT1G71850" "AT1G72040" "AT1G72270" "AT1G72330"
## [260] "AT1G72416" "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870"
## [267] "AT1G73890" "AT1G74010" "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280"
## [274] "AT1G75830" "AT1G76240" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77580" "AT1G77810"
## [281] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G79440" "AT1G79460"
## [288] "AT1G79680" "AT1G80270" "AT1G80760" "AT2G01280" "AT2G01540" "AT2G01890" "AT2G02010"
## [295] "AT2G02100" "AT2G02150" "AT2G02220" "AT2G02230" "AT2G02410" "AT2G02930" "AT2G03550"
## [302] "AT2G04030" "AT2G04039" "AT2G04790" "AT2G05160" "AT2G05630" "AT2G05753" "AT2G11890"
## [309] "AT2G14170" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G15890" "AT2G16365" "AT2G17740"
## [316] "AT2G17972" "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19190" "AT2G19450" "AT2G19670"
## [323] "AT2G20020" "AT2G20585" "AT2G21130" "AT2G21185" "AT2G21187" "AT2G21320" "AT2G21330"
## [330] "AT2G21660" "AT2G22240" "AT2G22450" "AT2G22970" "AT2G22980" "AT2G23030" "AT2G23110"
## [337] "AT2G23290" "AT2G23340" "AT2G23430" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440"
## [344] "AT2G24540" "AT2G24545" "AT2G24570" "AT2G24580" "AT2G24645" "AT2G24762" "AT2G24820"
## [351] "AT2G25530" "AT2G25680" "AT2G25730" "AT2G25930" "AT2G26080" "AT2G26560" "AT2G26650"
## [358] "AT2G26692" "AT2G27200" "AT2G27420" "AT2G28190" "AT2G28790" "AT2G28930" "AT2G29090"
## [365] "AT2G29720" "AT2G29740" "AT2G30100" "AT2G30150" "AT2G30395" "AT2G30424" "AT2G30520"
## [372] "AT2G30750" "AT2G30760" "AT2G30770" "AT2G31010" "AT2G31380" "AT2G31750" "AT2G31751"
## [379] "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33830" "AT2G33855" "AT2G35760"
## [386] "AT2G35950" "AT2G35980" "AT2G36000" "AT2G36390" "AT2G36590" "AT2G36750" "AT2G36800"
## [393] "AT2G36815" "AT2G37240" "AT2G37430" "AT2G37460" "AT2G37630" "AT2G37940" "AT2G37970"
## [400] "AT2G38465" "AT2G38750" "AT2G38760" "AT2G38860" "AT2G39200" "AT2G39380" "AT2G39400"
## [407] "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39730" "AT2G39900" "AT2G39920"
## [414] "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G41050" "AT2G41250" "AT2G41290"
## [421] "AT2G41660" "AT2G42360" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43590" "AT2G43620"
## [428] "AT2G43650" "AT2G43710" "AT2G43940" "AT2G44080" "AT2G45340" "AT2G46670" "AT2G46790"
## [435] "AT2G46810" "AT2G46830" "AT2G46940" "AT2G47370" "AT2G47390" "AT2G47450" "AT2G47485"
## [442] "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180" "AT3G01440" "AT3G02800"
## [449] "AT3G02830" "AT3G04140" "AT3G04420" "AT3G04950" "AT3G05390" "AT3G06145" "AT3G06520"
## [456] "AT3G06750" "AT3G06920" "AT3G07310" "AT3G07640" "AT3G07650" "AT3G07750" "AT3G07770"
## [463] "AT3G09160" "AT3G09162" "AT3G09190" "AT3G09390" "AT3G09405" "AT3G09600" "AT3G09650"
## [470] "AT3G10040" "AT3G10110" "AT3G10410" "AT3G10525" "AT3G11020" "AT3G11090" "AT3G11110"
## [477] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G12320" "AT3G13450" "AT3G13470"
## [484] "AT3G13700" "AT3G13710" "AT3G14360" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15356"
## [491] "AT3G15518" "AT3G15540" "AT3G15620" "AT3G15850" "AT3G15990" "AT3G16180" "AT3G16360"
## [498] "AT3G16520" "AT3G16530" "AT3G16565" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840"
## [505] "AT3G18080" "AT3G18750" "AT3G19000" "AT3G19210" "AT3G19260" "AT3G19440" "AT3G19450"
## [512] "AT3G19480" "AT3G19615" "AT3G20410" "AT3G21240" "AT3G21390" "AT3G21460" "AT3G21470"
## [519] "AT3G21890" "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G22460" "AT3G23090"
## [526] "AT3G23210" "AT3G23280" "AT3G23510" "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190"
## [533] "AT3G24460" "AT3G25030" "AT3G25670" "AT3G26500" "AT3G26570" "AT3G26670" "AT3G26680"
## [540] "AT3G26740" "AT3G26830" "AT3G27210" "AT3G27300" "AT3G27350" "AT3G27415" "AT3G27416"
## [547] "AT3G28040" "AT3G28370" "AT3G28540" "AT3G30460" "AT3G30720" "AT3G43670" "AT3G43790"
## [554] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46090"
## [561] "AT3G46440" "AT3G46640" "AT3G46690" "AT3G46900" "AT3G47070" "AT3G47360" "AT3G47420"
## [568] "AT3G47430" "AT3G47800" "AT3G47860" "AT3G48280" "AT3G48490" "AT3G48560" "AT3G48660"
## [575] "AT3G48690" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G49240" "AT3G49470" "AT3G49570"
## [582] "AT3G50120" "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50685" "AT3G50810" "AT3G51330"
## [589] "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52450" "AT3G52720" "AT3G52920" "AT3G53700"
## [596] "AT3G53830" "AT3G53920" "AT3G54150" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [603] "AT3G54720" "AT3G54900" "AT3G55150" "AT3G55450" "AT3G56080" "AT3G56160" "AT3G56290"
## [610] "AT3G56300" "AT3G56330" "AT3G56500" "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180"
## [617] "AT3G57190" "AT3G57400" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G58840" "AT3G58990"
## [624] "AT3G59220" "AT3G59250" "AT3G59330" "AT3G59350" "AT3G59400" "AT3G59700" "AT3G59900"
## [631] "AT3G61160" "AT3G61220" "AT3G61780" "AT3G61880" "AT3G62150" "AT3G63160" "AT3G63200"
## [638] "AT3G63380" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [645] "AT4G01080" "AT4G01130" "AT4G01250" "AT4G01535" "AT4G01750" "AT4G02380" "AT4G02520"
## [652] "AT4G02630" "AT4G02990" "AT4G03460" "AT4G03600" "AT4G04020" "AT4G04330" "AT4G04610"
## [659] "AT4G05110" "AT4G09020" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620"
## [666] "AT4G11100" "AT4G11175" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12390" "AT4G12470"
## [673] "AT4G12480" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14270" "AT4G14440"
## [680] "AT4G14690" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550"
## [687] "AT4G15810" "AT4G16140" "AT4G16146" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16820"
## [694] "AT4G16980" "AT4G17140" "AT4G17180" "AT4G17680" "AT4G17880" "AT4G17970" "AT4G18430"
## [701] "AT4G18540" "AT4G18800" "AT4G19120" "AT4G19170" "AT4G19390" "AT4G19410" "AT4G19810"
## [708] "AT4G19880" "AT4G20000" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990" "AT4G22710"
## [715] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23680" "AT4G23770" "AT4G23810" "AT4G24540"
## [722] "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780" "AT4G25810" "AT4G25900" "AT4G26270"
## [729] "AT4G26600" "AT4G26670" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27130" "AT4G27700"
## [736] "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G28660" "AT4G28700" "AT4G28730"
## [743] "AT4G28740" "AT4G28780" "AT4G29600" "AT4G30470" "AT4G30610" "AT4G30690" "AT4G30960"
## [750] "AT4G31050" "AT4G31210" "AT4G31390" "AT4G31550" "AT4G31620" "AT4G31870" "AT4G32340"
## [757] "AT4G32770" "AT4G33010" "AT4G33160" "AT4G33560" "AT4G33980" "AT4G33985" "AT4G34550"
## [764] "AT4G34580" "AT4G34610" "AT4G34630" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990"
## [771] "AT4G35090" "AT4G35180" "AT4G35380" "AT4G36580" "AT4G36760" "AT4G36770" "AT4G36950"
## [778] "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37650" "AT4G37800" "AT4G37925"
## [785] "AT4G38000" "AT4G38060" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G38680" "AT4G38960"
## [792] "AT4G38970" "AT4G39230" "AT4G39270" "AT4G39330" "AT4G39470" "AT4G39510" "AT4G39800"
## [799] "AT4G40070" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [806] "AT5G02160" "AT5G02180" "AT5G02230" "AT5G02260" "AT5G02540" "AT5G02780" "AT5G02830"
## [813] "AT5G02950" "AT5G03460" "AT5G03555" "AT5G03760" "AT5G05190" "AT5G05270" "AT5G05410"
## [820] "AT5G05580" "AT5G06550" "AT5G06690" "AT5G06790" "AT5G08380" "AT5G08490" "AT5G08610"
## [827] "AT5G08720" "AT5G08760" "AT5G09500" "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470"
## [834] "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G11210" "AT5G11670" "AT5G12080"
## [841] "AT5G12110" "AT5G12880" "AT5G12930" "AT5G13400" "AT5G13730" "AT5G13770" "AT5G13920"
## [848] "AT5G14350" "AT5G14560" "AT5G14580" "AT5G14610" "AT5G14740" "AT5G15030" "AT5G15600"
## [855] "AT5G15640" "AT5G15840" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340"
## [862] "AT5G16380" "AT5G16530" "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18470" "AT5G18525"
## [869] "AT5G18540" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300" "AT5G19730" "AT5G19850"
## [876] "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380" "AT5G20950" "AT5G21100"
## [883] "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23235" "AT5G23240" "AT5G23575" "AT5G23660"
## [890] "AT5G23730" "AT5G23750" "AT5G23760" "AT5G24030" "AT5G24105" "AT5G24110" "AT5G24120"
## [897] "AT5G24150" "AT5G24165" "AT5G24240" "AT5G24280" "AT5G24380" "AT5G24470" "AT5G24580"
## [904] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25340" "AT5G25590"
## [911] "AT5G25630" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G28500"
## [918] "AT5G33290" "AT5G34780" "AT5G37740" "AT5G38420" "AT5G38430" "AT5G38895" "AT5G39410"
## [925] "AT5G39580" "AT5G39710" "AT5G40240" "AT5G40760" "AT5G41260" "AT5G42900" "AT5G43400"
## [932] "AT5G43630" "AT5G43850" "AT5G44010" "AT5G44190" "AT5G44380" "AT5G44480" "AT5G44490"
## [939] "AT5G44910" "AT5G45800" "AT5G46050" "AT5G46220" "AT5G46580" "AT5G46600" "AT5G46860"
## [946] "AT5G46871" "AT5G47220" "AT5G47360" "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48250"
## [953] "AT5G48430" "AT5G48850" "AT5G48910" "AT5G49015" "AT5G49100" "AT5G49740" "AT5G49900"
## [960] "AT5G50100" "AT5G50200" "AT5G51540" "AT5G51570" "AT5G51720" "AT5G51790" "AT5G52570"
## [967] "AT5G53110" "AT5G53170" "AT5G53200" "AT5G53970" "AT5G54130" "AT5G54190" "AT5G54470"
## [974] "AT5G54585" "AT5G54610" "AT5G54630" "AT5G54930" "AT5G54960" "AT5G55050" "AT5G55090"
## [981] "AT5G55530" "AT5G55570" "AT5G55730" "AT5G55740" "AT5G55790" "AT5G56580" "AT5G56850"
## [988] "AT5G56860" "AT5G56960" "AT5G57030" "AT5G57110" "AT5G57180" "AT5G57220" "AT5G57240"
## [995] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G58770" "AT5G58870"
## [ reached getOption("max.print") -- omitted 59 entries ]
##
## $`A1-V1_up_down`
## [1] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" "AT1G17665" "AT1G21500" "AT1G55260" "AT1G62170"
## [9] "AT1G62180" "AT1G64500" "AT1G68050" "AT2G21320" "AT2G24762" "AT2G25730" "AT2G40080" "AT2G46830"
## [17] "AT3G07640" "AT3G07650" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [25] "AT4G01130" "AT4G04330" "AT4G12390" "AT4G26670" "AT4G33980" "AT4G37650" "AT5G02150" "AT5G11150"
## [33] "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280" "AT5G39410" "AT5G42900"
## [41] "AT5G47610" "AT5G48250" "AT5G48570" "AT5G54610" "AT5G57110" "AT5G58770" "AT5G59570" "AT5G60100"
## [49] "AT5G61380" "AT5G62140"
##
## $`M6-A6_up_down`
## [1] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" "AT1G01390" "AT1G01430" "AT1G01480"
## [8] "AT1G01560" "AT1G01660" "AT1G01680" "AT1G01690" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450" "AT1G02470" "AT1G02500" "AT1G02520"
## [22] "AT1G02610" "AT1G02620" "AT1G02740" "AT1G02820" "AT1G02850" "AT1G02920" "AT1G02930"
## [29] "AT1G03020" "AT1G03050" "AT1G03130" "AT1G03310" "AT1G03495" "AT1G03600" "AT1G03610"
## [36] "AT1G03630" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04680"
## [43] "AT1G04770" "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05540"
## [50] "AT1G05570" "AT1G05880" "AT1G06040" "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06460"
## [57] "AT1G06620" "AT1G06680" "AT1G07000" "AT1G07050" "AT1G07280" "AT1G07430" "AT1G07440"
## [64] "AT1G07500" "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08380" "AT1G08450" "AT1G08550"
## [71] "AT1G08860" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020"
## [78] "AT1G10040" "AT1G10150" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10657" "AT1G10760"
## [85] "AT1G10960" "AT1G10990" "AT1G11130" "AT1G11180" "AT1G11260" "AT1G11290" "AT1G11330"
## [92] "AT1G11362" "AT1G11380" "AT1G11905" "AT1G11925" "AT1G12090" "AT1G12160" "AT1G12200"
## [99] "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12450" "AT1G12500" "AT1G12710" "AT1G12730"
## [106] "AT1G12900" "AT1G12940" "AT1G13245" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13470"
## [113] "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550" "AT1G13650" "AT1G13700" "AT1G13830"
## [120] "AT1G13930" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14480" "AT1G14540"
## [127] "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G15040" "AT1G15080" "AT1G15150"
## [134] "AT1G15160" "AT1G15290" "AT1G15415" "AT1G15520" "AT1G15550" "AT1G15690" "AT1G15790"
## [141] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16090"
## [148] "AT1G16150" "AT1G16300" "AT1G16400" "AT1G16410" "AT1G16420" "AT1G16670" "AT1G16720"
## [155] "AT1G16730" "AT1G17100" "AT1G17170" "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500"
## [162] "AT1G17600" "AT1G17615" "AT1G17744" "AT1G17745" "AT1G17750" "AT1G17830" "AT1G17850"
## [169] "AT1G17970" "AT1G18000" "AT1G18010" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18570"
## [176] "AT1G18890" "AT1G18910" "AT1G19020" "AT1G19150" "AT1G19250" "AT1G19450" "AT1G19510"
## [183] "AT1G19540" "AT1G19715" "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20310"
## [190] "AT1G20440" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310" "AT1G21370" "AT1G21390"
## [197] "AT1G21500" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22190"
## [204] "AT1G22220" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22400" "AT1G22403"
## [211] "AT1G22480" "AT1G22490" "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590"
## [218] "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23200" "AT1G23205"
## [225] "AT1G23390" "AT1G23400" "AT1G23480" "AT1G23710" "AT1G23740" "AT1G23840" "AT1G23850"
## [232] "AT1G24095" "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G25400"
## [239] "AT1G25450" "AT1G26130" "AT1G26150" "AT1G26230" "AT1G26380" "AT1G26390" "AT1G26410"
## [246] "AT1G26420" "AT1G26761" "AT1G26800" "AT1G27110" "AT1G27480" "AT1G27770" "AT1G27950"
## [253] "AT1G28010" "AT1G28330" "AT1G28370" "AT1G28480" "AT1G29090" "AT1G29195" "AT1G29280"
## [260] "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530"
## [267] "AT1G29600" "AT1G29640" "AT1G29670" "AT1G29680" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30190" "AT1G30270" "AT1G30420" "AT1G30520" "AT1G30620" "AT1G30814" "AT1G30850"
## [281] "AT1G30900" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330" "AT1G31880" "AT1G31920"
## [288] "AT1G32060" "AT1G32080" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950"
## [295] "AT1G32960" "AT1G33030" "AT1G33110" "AT1G33170" "AT1G33240" "AT1G33420" "AT1G33430"
## [302] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33760" "AT1G33800" "AT1G33950" "AT1G33960"
## [309] "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140" "AT1G35210" "AT1G35230" "AT1G35420"
## [316] "AT1G35710" "AT1G35910" "AT1G36370" "AT1G36622" "AT1G36675" "AT1G37130" "AT1G42550"
## [323] "AT1G42980" "AT1G43670" "AT1G43910" "AT1G44000" "AT1G44130" "AT1G44446" "AT1G45010"
## [330] "AT1G45145" "AT1G47210" "AT1G47370" "AT1G47440" "AT1G47510" "AT1G47580" "AT1G47890"
## [337] "AT1G48030" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010"
## [344] "AT1G49050" "AT1G49200" "AT1G49380" "AT1G49490" "AT1G49650" "AT1G49975" "AT1G49990"
## [351] "AT1G50040" "AT1G50290" "AT1G50400" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [358] "AT1G51640" "AT1G51645" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51805" "AT1G51850"
## [365] "AT1G51860" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52230" "AT1G52315" "AT1G52342"
## [372] "AT1G52540" "AT1G52565" "AT1G52770" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53160"
## [379] "AT1G53620" "AT1G53625" "AT1G54000" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G54960"
## [386] "AT1G55330" "AT1G55370" "AT1G55480" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [393] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G56670"
## [400] "AT1G56720" "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590"
## [407] "AT1G59865" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690" "AT1G60730" "AT1G60800"
## [414] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61300" "AT1G61340"
## [421] "AT1G61370" "AT1G61415" "AT1G61420" "AT1G61520" "AT1G61550" "AT1G61640" "AT1G61795"
## [428] "AT1G61800" "AT1G61810" "AT1G62170" "AT1G62180" "AT1G62320" "AT1G62422" "AT1G62510"
## [435] "AT1G62560" "AT1G62580" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63245" "AT1G63570"
## [442] "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G63930" "AT1G64065" "AT1G64355"
## [449] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900"
## [456] "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65590" "AT1G65690"
## [463] "AT1G65870" "AT1G66090" "AT1G66130" "AT1G66230" "AT1G66250" "AT1G66390" "AT1G66460"
## [470] "AT1G66550" "AT1G66590" "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66840" "AT1G66880"
## [477] "AT1G66930" "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67265" "AT1G67360"
## [484] "AT1G67520" "AT1G67590" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67740" "AT1G67800"
## [491] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67910" "AT1G67920" "AT1G67980" "AT1G68010"
## [498] "AT1G68050" "AT1G68110" "AT1G68190" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68520"
## [505] "AT1G68540" "AT1G68620" "AT1G68670" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G68830"
## [512] "AT1G68890" "AT1G69140" "AT1G69260" "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790"
## [519] "AT1G69840" "AT1G69890" "AT1G69930" "AT1G70090" "AT1G70140" "AT1G70170" "AT1G70290"
## [526] "AT1G70580" "AT1G70690" "AT1G70820" "AT1G70990" "AT1G71000" "AT1G71030" "AT1G71390"
## [533] "AT1G71690" "AT1G72000" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72220" "AT1G72240"
## [540] "AT1G72270" "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72540" "AT1G72600" "AT1G72610"
## [547] "AT1G72630" "AT1G72640" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770"
## [554] "AT1G72870" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010"
## [561] "AT1G73130" "AT1G73325" "AT1G73330" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750"
## [568] "AT1G73805" "AT1G73810" "AT1G73870" "AT1G73890" "AT1G73965" "AT1G74070" "AT1G74080"
## [575] "AT1G74100" "AT1G74200" "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750"
## [582] "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75040" "AT1G75060" "AT1G75170" "AT1G75250"
## [589] "AT1G75460" "AT1G75690" "AT1G75770" "AT1G75830" "AT1G75900" "AT1G75960" "AT1G76040"
## [596] "AT1G76080" "AT1G76100" "AT1G76110" "AT1G76620" "AT1G76690" "AT1G76760" "AT1G76955"
## [603] "AT1G76970" "AT1G76980" "AT1G77090" "AT1G77210" "AT1G77500" "AT1G77630" "AT1G77640"
## [610] "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78000" "AT1G78100" "AT1G78190"
## [617] "AT1G78380" "AT1G78410" "AT1G78450" "AT1G78600" "AT1G78780" "AT1G78990" "AT1G78995"
## [624] "AT1G79330" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79770" "AT1G79780" "AT1G80110"
## [631] "AT1G80280" "AT1G80300" "AT1G80440" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80630"
## [638] "AT1G80830" "AT1G80840" "AT1G80920" "AT2G01180" "AT2G01300" "AT2G01590" "AT2G01755"
## [645] "AT2G01760" "AT2G01818" "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070"
## [652] "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02710" "AT2G02930" "AT2G02950" "AT2G02990"
## [659] "AT2G03090" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03505" "AT2G03550" "AT2G03710"
## [666] "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495"
## [673] "AT2G04515" "AT2G04790" "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940"
## [680] "AT2G05995" "AT2G06520" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13360" "AT2G13790"
## [687] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G15020" "AT2G15090"
## [694] "AT2G15890" "AT2G15970" "AT2G16060" "AT2G16365" "AT2G16630" "AT2G16660" "AT2G16720"
## [701] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17230" "AT2G17440"
## [708] "AT2G17500" "AT2G17695" "AT2G17720" "AT2G17780" "AT2G18000" "AT2G18160" "AT2G18162"
## [715] "AT2G18193" "AT2G18300" "AT2G18560" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G18700"
## [722] "AT2G18940" "AT2G19190" "AT2G19310" "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20250"
## [729] "AT2G20562" "AT2G20670" "AT2G20680" "AT2G21130" "AT2G21140" "AT2G21188" "AT2G21320"
## [736] "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790"
## [743] "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22200" "AT2G22470" "AT2G22810" "AT2G22830"
## [750] "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600" "AT2G23680"
## [757] "AT2G23810" "AT2G23840" "AT2G24110" "AT2G24285" "AT2G24490" "AT2G24550" "AT2G24580"
## [764] "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25190" "AT2G25200" "AT2G25240" "AT2G25260"
## [771] "AT2G25270" "AT2G25440" "AT2G25450" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G25900"
## [778] "AT2G26080" "AT2G26170" "AT2G26300" "AT2G26390" "AT2G26400" "AT2G26480" "AT2G26710"
## [785] "AT2G26870" "AT2G26975" "AT2G27420" "AT2G28120" "AT2G28160" "AT2G28210" "AT2G28305"
## [792] "AT2G28400" "AT2G28570" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29100" "AT2G29170"
## [799] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29400"
## [806] "AT2G29450" "AT2G29460" "AT2G29630" "AT2G29650" "AT2G29670" "AT2G29720" "AT2G29750"
## [813] "AT2G29990" "AT2G30070" "AT2G30080" "AT2G30150" "AT2G30390" "AT2G30395" "AT2G30400"
## [820] "AT2G30420" "AT2G30550" "AT2G30600" "AT2G30615" "AT2G30750" "AT2G30770" "AT2G30930"
## [827] "AT2G31018" "AT2G31020" "AT2G31270" "AT2G31360" "AT2G31585" "AT2G31790" "AT2G31865"
## [834] "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [841] "AT2G32179" "AT2G32180" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32290" "AT2G32430"
## [848] "AT2G32460" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32590"
## [855] "AT2G32640" "AT2G32960" "AT2G33060" "AT2G33110" "AT2G33255" "AT2G33330" "AT2G33580"
## [862] "AT2G33735" "AT2G33855" "AT2G34070" "AT2G34410" "AT2G34420" "AT2G34500" "AT2G34510"
## [869] "AT2G34580" "AT2G34600" "AT2G34610" "AT2G34620" "AT2G34650" "AT2G34760" "AT2G34940"
## [876] "AT2G35130" "AT2G35260" "AT2G35660" "AT2G35710" "AT2G35760" "AT2G35960" "AT2G35980"
## [883] "AT2G36026" "AT2G36050" "AT2G36270" "AT2G36580" "AT2G36670" "AT2G36690" "AT2G36830"
## [890] "AT2G36990" "AT2G37070" "AT2G37100" "AT2G37220" "AT2G37260" "AT2G37440" "AT2G37450"
## [897] "AT2G37530" "AT2G37540" "AT2G37560" "AT2G37585" "AT2G37710" "AT2G37750" "AT2G37790"
## [904] "AT2G37890" "AT2G37950" "AT2G37980" "AT2G38210" "AT2G38230" "AT2G38290" "AT2G38340"
## [911] "AT2G38460" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38540" "AT2G38690" "AT2G38790"
## [918] "AT2G38820" "AT2G38860" "AT2G39110" "AT2G39220" "AT2G39230" "AT2G39320" "AT2G39350"
## [925] "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650" "AT2G39730" "AT2G39880" "AT2G39920"
## [932] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40095" "AT2G40140" "AT2G40150" "AT2G40330"
## [939] "AT2G40540" "AT2G40670" "AT2G40740" "AT2G40840" "AT2G40960" "AT2G41010" "AT2G41050"
## [946] "AT2G41100" "AT2G41342" "AT2G41380" "AT2G41410" "AT2G41430" "AT2G41480" "AT2G41660"
## [953] "AT2G41835" "AT2G41880" "AT2G41990" "AT2G42060" "AT2G42320" "AT2G42350" "AT2G42380"
## [960] "AT2G42485" "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43010" "AT2G43050"
## [967] "AT2G43100" "AT2G43120" "AT2G43140" "AT2G43290" "AT2G43320" "AT2G43550" "AT2G43570"
## [974] "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290" "AT2G44578" "AT2G44600"
## [981] "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45180" "AT2G45220" "AT2G45400" "AT2G45560"
## [988] "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430"
## [995] "AT2G46450" "AT2G46620" "AT2G46680" "AT2G46790" "AT2G47000" "AT2G47130"
## [ reached getOption("max.print") -- omitted 1373 entries ]
##
## $`M6-V6_up_down`
## [1] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520"
## [8] "AT1G02610" "AT1G02660" "AT1G03010" "AT1G03130" "AT1G03200" "AT1G03600" "AT1G03630"
## [15] "AT1G03680" "AT1G03990" "AT1G04250" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04770"
## [22] "AT1G05100" "AT1G05675" "AT1G05840" "AT1G06040" "AT1G06460" "AT1G06620" "AT1G06680"
## [29] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G07500" "AT1G07570" "AT1G08050" "AT1G08380"
## [36] "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020" "AT1G10150"
## [43] "AT1G10586" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11400" "AT1G12090" "AT1G12160"
## [50] "AT1G12380" "AT1G12540" "AT1G12710" "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13150"
## [57] "AT1G13245" "AT1G13260" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650" "AT1G13830"
## [64] "AT1G13930" "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700"
## [71] "AT1G14740" "AT1G15350" "AT1G15810" "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980"
## [78] "AT1G15990" "AT1G17147" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G17970" "AT1G18000"
## [85] "AT1G18010" "AT1G18020" "AT1G18200" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [92] "AT1G19150" "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680"
## [99] "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20310" "AT1G20340" "AT1G20460" "AT1G21130"
## [106] "AT1G21240" "AT1G21500" "AT1G21550" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22220"
## [113] "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23060" "AT1G23390"
## [120] "AT1G23740" "AT1G23850" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26730"
## [127] "AT1G26770" "AT1G26800" "AT1G26930" "AT1G27330" "AT1G27480" "AT1G28130" "AT1G28370"
## [134] "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29640" "AT1G29670"
## [141] "AT1G29910" "AT1G29920" "AT1G30100" "AT1G30160" "AT1G30380" "AT1G30850" "AT1G31120"
## [148] "AT1G31330" "AT1G31690" "AT1G31770" "AT1G31900" "AT1G32060" "AT1G32080" "AT1G32220"
## [155] "AT1G32870" "AT1G33110" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G33950" "AT1G33960"
## [162] "AT1G34180" "AT1G34420" "AT1G35140" "AT1G36370" "AT1G37130" "AT1G43160" "AT1G43245"
## [169] "AT1G43310" "AT1G43670" "AT1G43910" "AT1G44130" "AT1G44446" "AT1G44575" "AT1G47510"
## [176] "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605" "AT1G49200" "AT1G49520" "AT1G49530"
## [183] "AT1G50590" "AT1G51080" "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51760"
## [190] "AT1G51780" "AT1G51805" "AT1G51860" "AT1G52030" "AT1G52200" "AT1G52220" "AT1G52230"
## [197] "AT1G52342" "AT1G52510" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53163" "AT1G53830"
## [204] "AT1G54010" "AT1G54030" "AT1G54095" "AT1G54410" "AT1G54780" "AT1G54790" "AT1G54820"
## [211] "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55610" "AT1G55670" "AT1G56300" "AT1G56340"
## [218] "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G58030" "AT1G59640"
## [225] "AT1G59860" "AT1G60190" "AT1G60730" "AT1G60800" "AT1G61110" "AT1G61120" "AT1G61190"
## [232] "AT1G61215" "AT1G61260" "AT1G61300" "AT1G61340" "AT1G61520" "AT1G61550" "AT1G62520"
## [239] "AT1G63840" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65690"
## [246] "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66130" "AT1G66230" "AT1G66280" "AT1G66350"
## [253] "AT1G66910" "AT1G66930" "AT1G66960" "AT1G67340" "AT1G67420" "AT1G67590" "AT1G67635"
## [260] "AT1G67740" "AT1G67820" "AT1G67910" "AT1G68050" "AT1G68110" "AT1G68840" "AT1G69140"
## [267] "AT1G69260" "AT1G69360" "AT1G69480" "AT1G69530" "AT1G69570" "AT1G69572" "AT1G69830"
## [274] "AT1G69890" "AT1G70090" "AT1G70420" "AT1G70580" "AT1G70690" "AT1G70790" "AT1G70820"
## [281] "AT1G71000" "AT1G71030" "AT1G71110" "AT1G71390" "AT1G71970" "AT1G72210" "AT1G72410"
## [288] "AT1G72416" "AT1G72430" "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645"
## [295] "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G73470" "AT1G73480" "AT1G73600"
## [302] "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74100" "AT1G74430" "AT1G74710"
## [309] "AT1G74730" "AT1G74940" "AT1G75280" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G75690"
## [316] "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76620" "AT1G76640" "AT1G76690"
## [323] "AT1G76980" "AT1G77210" "AT1G77280" "AT1G77760" "AT1G78000" "AT1G78290" "AT1G78600"
## [330] "AT1G78780" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79270" "AT1G79310" "AT1G79330"
## [337] "AT1G80110" "AT1G80280" "AT1G80440" "AT1G80590" "AT1G80840" "AT1G80920" "AT2G01008"
## [344] "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755" "AT2G01830" "AT2G01870" "AT2G01890"
## [351] "AT2G01918" "AT2G02070" "AT2G02340" "AT2G02450" "AT2G03310" "AT2G03410" "AT2G03420"
## [358] "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G04790"
## [365] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940" "AT2G06255" "AT2G06520"
## [372] "AT2G13360" "AT2G14610" "AT2G14620" "AT2G15090" "AT2G15760" "AT2G15890" "AT2G15970"
## [379] "AT2G16270" "AT2G16365" "AT2G16650" "AT2G16720" "AT2G17230" "AT2G17500" "AT2G17880"
## [386] "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18350" "AT2G18560" "AT2G18660" "AT2G18700"
## [393] "AT2G19310" "AT2G20110" "AT2G20142" "AT2G21130" "AT2G21188" "AT2G21320" "AT2G21330"
## [400] "AT2G21970" "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G22810" "AT2G22830"
## [407] "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240" "AT2G24550" "AT2G24580" "AT2G24645"
## [414] "AT2G25200" "AT2G25690" "AT2G25735" "AT2G25900" "AT2G26150" "AT2G26300" "AT2G26390"
## [421] "AT2G26400" "AT2G26480" "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27228" "AT2G27230"
## [428] "AT2G27300" "AT2G27385" "AT2G27420" "AT2G28110" "AT2G28120" "AT2G28450" "AT2G28570"
## [435] "AT2G28605" "AT2G28900" "AT2G29100" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310"
## [442] "AT2G29360" "AT2G29630" "AT2G29650" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30150"
## [449] "AT2G30420" "AT2G30540" "AT2G30570" "AT2G30615" "AT2G30770" "AT2G30820" "AT2G30830"
## [456] "AT2G31040" "AT2G31180" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32460"
## [463] "AT2G32500" "AT2G32640" "AT2G32930" "AT2G33830" "AT2G34010" "AT2G34070" "AT2G34080"
## [470] "AT2G34410" "AT2G34420" "AT2G34430" "AT2G34620" "AT2G35660" "AT2G35940" "AT2G35945"
## [477] "AT2G35950" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G36640" "AT2G37070" "AT2G37440"
## [484] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37750" "AT2G37950" "AT2G38240" "AT2G38250"
## [491] "AT2G38400" "AT2G38480" "AT2G38490" "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300"
## [498] "AT2G39400" "AT2G39435" "AT2G39730" "AT2G39800" "AT2G39900" "AT2G39980" "AT2G40000"
## [505] "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40200" "AT2G40330" "AT2G40340" "AT2G40460"
## [512] "AT2G40550" "AT2G40610" "AT2G40670" "AT2G40840" "AT2G40960" "AT2G41070" "AT2G41430"
## [519] "AT2G42060" "AT2G42485" "AT2G42530" "AT2G42540" "AT2G42760" "AT2G42890" "AT2G43000"
## [526] "AT2G43010" "AT2G43120" "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680"
## [533] "AT2G44130" "AT2G44490" "AT2G44578" "AT2G44600" "AT2G44840" "AT2G44940" "AT2G45180"
## [540] "AT2G45245" "AT2G45560" "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46040" "AT2G46240"
## [547] "AT2G46400" "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46790" "AT2G46820"
## [554] "AT2G46830" "AT2G46900" "AT2G46970" "AT2G47000" "AT2G47420" "AT2G47770" "AT2G47820"
## [561] "AT2G47920" "AT2G47950" "AT3G01060" "AT3G01440" "AT3G01500" "AT3G01770" "AT3G01810"
## [568] "AT3G02210" "AT3G02550" "AT3G02730" "AT3G02885" "AT3G02990" "AT3G03310" "AT3G03440"
## [575] "AT3G04000" "AT3G04210" "AT3G04300" "AT3G04380" "AT3G04420" "AT3G05500" "AT3G06020"
## [582] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G06490" "AT3G06890" "AT3G07200" "AT3G07310"
## [589] "AT3G07320" "AT3G07350" "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440"
## [596] "AT3G09580" "AT3G09600" "AT3G09960" "AT3G10020" "AT3G10060" "AT3G10520" "AT3G10720"
## [603] "AT3G10815" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G11210" "AT3G11450" "AT3G11480"
## [610] "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13437" "AT3G13470"
## [617] "AT3G13610" "AT3G13730" "AT3G14200" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870"
## [624] "AT3G15536" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G15950" "AT3G16130" "AT3G16250"
## [631] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17390" "AT3G17420"
## [638] "AT3G17510" "AT3G17640" "AT3G17690" "AT3G17840" "AT3G17860" "AT3G18050" "AT3G18080"
## [645] "AT3G18500" "AT3G18710" "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19100"
## [652] "AT3G19615" "AT3G19680" "AT3G19690" "AT3G19970" "AT3G20250" "AT3G21055" "AT3G21080"
## [659] "AT3G21320" "AT3G21500" "AT3G21670" "AT3G21700" "AT3G21780" "AT3G21950" "AT3G22160"
## [666] "AT3G22210" "AT3G22275" "AT3G22290" "AT3G23880" "AT3G24430" "AT3G24515" "AT3G24518"
## [673] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25670" "AT3G25890" "AT3G26180"
## [680] "AT3G26290" "AT3G26440" "AT3G26470" "AT3G26510" "AT3G26740" "AT3G27170" "AT3G27415"
## [687] "AT3G27416" "AT3G27690" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510" "AT3G28580"
## [694] "AT3G29320" "AT3G29330" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G45970" "AT3G46370"
## [701] "AT3G46630" "AT3G46640" "AT3G46658" "AT3G46660" "AT3G46780" "AT3G46970" "AT3G47070"
## [708] "AT3G47420" "AT3G47460" "AT3G47470" "AT3G47480" "AT3G47500" "AT3G47730" "AT3G48090"
## [715] "AT3G48100" "AT3G48115" "AT3G48200" "AT3G48280" "AT3G48420" "AT3G48520" "AT3G48580"
## [722] "AT3G48630" "AT3G48700" "AT3G48720" "AT3G48780" "AT3G49570" "AT3G49580" "AT3G49790"
## [729] "AT3G50060" "AT3G50770" "AT3G50820" "AT3G50840" "AT3G50920" "AT3G50930" "AT3G50960"
## [736] "AT3G51080" "AT3G51090" "AT3G51400" "AT3G51470" "AT3G51670" "AT3G51750" "AT3G51860"
## [743] "AT3G52070" "AT3G52072" "AT3G52180" "AT3G52430" "AT3G52960" "AT3G53210" "AT3G53470"
## [750] "AT3G53800" "AT3G53830" "AT3G54320" "AT3G54366" "AT3G54490" "AT3G54500" "AT3G54890"
## [757] "AT3G55060" "AT3G55240" "AT3G55500" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [764] "AT3G55970" "AT3G56160" "AT3G56170" "AT3G56260" "AT3G56290" "AT3G56940" "AT3G57260"
## [771] "AT3G57380" "AT3G57460" "AT3G57740" "AT3G57950" "AT3G59060" "AT3G59750" "AT3G59870"
## [778] "AT3G59900" "AT3G59930" "AT3G59940" "AT3G60390" "AT3G60420" "AT3G60470" "AT3G60490"
## [785] "AT3G60961" "AT3G60966" "AT3G61060" "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430"
## [792] "AT3G61450" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870" "AT3G61890" "AT3G61930"
## [799] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63010" "AT3G63140" "AT3G63160" "AT3G63380"
## [806] "AT4G00165" "AT4G00700" "AT4G00970" "AT4G01330" "AT4G01430" "AT4G01535" "AT4G01540"
## [813] "AT4G01670" "AT4G02075" "AT4G02360" "AT4G02380" "AT4G02760" "AT4G02770" "AT4G03400"
## [820] "AT4G03460" "AT4G03510" "AT4G04020" "AT4G04223" "AT4G04330" "AT4G04340" "AT4G04490"
## [827] "AT4G04500" "AT4G04510" "AT4G04810" "AT4G04830" "AT4G05010" "AT4G05020" "AT4G05070"
## [834] "AT4G05100" "AT4G05180" "AT4G06534" "AT4G06744" "AT4G08950" "AT4G09010" "AT4G09650"
## [841] "AT4G09750" "AT4G09760" "AT4G09770" "AT4G10120" "AT4G10340" "AT4G10390" "AT4G10500"
## [848] "AT4G11240" "AT4G11300" "AT4G11350" "AT4G11360" "AT4G11521" "AT4G11990" "AT4G12320"
## [855] "AT4G12330" "AT4G12390" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [862] "AT4G12800" "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810"
## [869] "AT4G14270" "AT4G14560" "AT4G14630" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248"
## [876] "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G15975" "AT4G16146" "AT4G16260"
## [883] "AT4G16350" "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17660"
## [890] "AT4G17670" "AT4G17730" "AT4G17810" "AT4G18205" "AT4G18220" "AT4G19170" "AT4G19530"
## [897] "AT4G20320" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445" "AT4G21680" "AT4G21790"
## [904] "AT4G21870" "AT4G21990" "AT4G22070" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23150"
## [911] "AT4G23180" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G23800" "AT4G23810" "AT4G24240"
## [918] "AT4G25290" "AT4G25390" "AT4G25433" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26080"
## [925] "AT4G26120" "AT4G26470" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440"
## [932] "AT4G27590" "AT4G27700" "AT4G27860" "AT4G27870" "AT4G28240" "AT4G28270" "AT4G28703"
## [939] "AT4G28750" "AT4G29190" "AT4G29380" "AT4G29740" "AT4G29930" "AT4G30180" "AT4G30650"
## [946] "AT4G30662" "AT4G32280" "AT4G32340" "AT4G32590" "AT4G32920" "AT4G32980" "AT4G33010"
## [953] "AT4G33150" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34200" "AT4G34220"
## [960] "AT4G34250" "AT4G34630" "AT4G34650" "AT4G34900" "AT4G35600" "AT4G35655" "AT4G35720"
## [967] "AT4G36010" "AT4G36040" "AT4G36430" "AT4G36530" "AT4G36640" "AT4G36780" "AT4G36950"
## [974] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37850" "AT4G37900" "AT4G37925"
## [981] "AT4G38550" "AT4G38552" "AT4G38560" "AT4G38770" "AT4G39030" "AT4G39190" "AT4G39260"
## [988] "AT4G39580" "AT4G39710" "AT4G39730" "AT4G39950" "AT5G01015" "AT5G01520" "AT5G01530"
## [995] "AT5G01840" "AT5G01850" "AT5G02100" "AT5G02160" "AT5G02170" "AT5G02180"
## [ reached getOption("max.print") -- omitted 311 entries ]
##
## $`A6-V6_up_down`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03020" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04240"
## [15] "AT1G04490" "AT1G05010" "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148"
## [22] "AT1G06360" "AT1G08050" "AT1G08860" "AT1G09950" "AT1G10230" "AT1G11310" "AT1G11330"
## [29] "AT1G11905" "AT1G12210" "AT1G12240" "AT1G12540" "AT1G13110" "AT1G13310" "AT1G13550"
## [36] "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G16370" "AT1G16400" "AT1G16410"
## [43] "AT1G17147" "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19650"
## [50] "AT1G19670" "AT1G19960" "AT1G21250" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400"
## [57] "AT1G22770" "AT1G23200" "AT1G25370" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27100" "AT1G28010" "AT1G29280" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420"
## [71] "AT1G31280" "AT1G31290" "AT1G31690" "AT1G31770" "AT1G32920" "AT1G32940" "AT1G32960"
## [78] "AT1G33800" "AT1G34210" "AT1G35210" "AT1G35230" "AT1G43310" "AT1G43910" "AT1G44900"
## [85] "AT1G49520" "AT1G49530" "AT1G51660" "AT1G51780" "AT1G52200" "AT1G53620" "AT1G53625"
## [92] "AT1G54095" "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990"
## [99] "AT1G59865" "AT1G61140" "AT1G61370" "AT1G63040" "AT1G63570" "AT1G63750" "AT1G63820"
## [106] "AT1G64710" "AT1G65590" "AT1G66280" "AT1G66550" "AT1G66600" "AT1G67635" "AT1G67800"
## [113] "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G69370" "AT1G69480" "AT1G70420"
## [120] "AT1G70690" "AT1G71100" "AT1G72140" "AT1G72180" "AT1G72450" "AT1G72930" "AT1G73210"
## [127] "AT1G73805" "AT1G74430" "AT1G74710" "AT1G74950" "AT1G75540" "AT1G75830" "AT1G76970"
## [134] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G01830" "AT2G02930" "AT2G02990" "AT2G03980"
## [141] "AT2G04040" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G05070" "AT2G06255" "AT2G07687"
## [148] "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480" "AT2G16440" "AT2G18660" "AT2G20110"
## [155] "AT2G21510" "AT2G21790" "AT2G22200" "AT2G22770" "AT2G22930" "AT2G23760" "AT2G23810"
## [162] "AT2G24160" "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25130" "AT2G25737" "AT2G26150"
## [169] "AT2G26240" "AT2G26440" "AT2G26560" "AT2G27228" "AT2G27230" "AT2G28210" "AT2G28570"
## [176] "AT2G28890" "AT2G29720" "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31018" "AT2G31020"
## [183] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34010" "AT2G34070" "AT2G34500" "AT2G35950"
## [190] "AT2G36350" "AT2G36380" "AT2G36470" "AT2G36815" "AT2G36830" "AT2G37180" "AT2G37560"
## [197] "AT2G37940" "AT2G37980" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G38790" "AT2G39110"
## [204] "AT2G39250" "AT2G39800" "AT2G40340" "AT2G40460" "AT2G40550" "AT2G41380" "AT2G41835"
## [211] "AT2G42760" "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130"
## [218] "AT2G47140" "AT2G47600" "AT2G47730" "AT2G47950" "AT3G01180" "AT3G01290" "AT3G02840"
## [225] "AT3G02990" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G06020" "AT3G07195" "AT3G07720"
## [232] "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11470" "AT3G11480" "AT3G11840"
## [239] "AT3G13080" "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G14870" "AT3G15356"
## [246] "AT3G15720" "AT3G16460" "AT3G16510" "AT3G17510" "AT3G17860" "AT3G19010" "AT3G19100"
## [253] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21670" "AT3G21780" "AT3G22370" "AT3G22910"
## [260] "AT3G23530" "AT3G23910" "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600"
## [267] "AT3G26830" "AT3G27170" "AT3G27960" "AT3G28580" "AT3G28930" "AT3G29240" "AT3G29400"
## [274] "AT3G41768" "AT3G43270" "AT3G44350" "AT3G44830" "AT3G45260" "AT3G46520" "AT3G46940"
## [281] "AT3G47540" "AT3G47750" "AT3G47820" "AT3G48090" "AT3G48350" "AT3G48520" "AT3G48640"
## [288] "AT3G48850" "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150"
## [295] "AT3G54820" "AT3G55290" "AT3G55470" "AT3G55500" "AT3G55970" "AT3G56260" "AT3G56710"
## [302] "AT3G56870" "AT3G56891" "AT3G57700" "AT3G57780" "AT3G59710" "AT3G60190" "AT3G60420"
## [309] "AT3G60450" "AT3G60966" "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61760" "AT3G61890"
## [316] "AT3G62700" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895" "AT4G01950" "AT4G02380"
## [323] "AT4G02420" "AT4G02550" "AT4G03060" "AT4G03400" "AT4G05030" "AT4G09300" "AT4G09570"
## [330] "AT4G10060" "AT4G10390" "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G12030"
## [337] "AT4G13180" "AT4G14220" "AT4G14368" "AT4G14610" "AT4G15070" "AT4G15430" "AT4G16740"
## [344] "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660" "AT4G21380" "AT4G21840"
## [351] "AT4G21903" "AT4G22200" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010" "AT4G23170"
## [358] "AT4G23180" "AT4G23250" "AT4G23420" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25433"
## [365] "AT4G25780" "AT4G25900" "AT4G27745" "AT4G27870" "AT4G28390" "AT4G29440" "AT4G30280"
## [372] "AT4G30640" "AT4G32780" "AT4G33925" "AT4G33930" "AT4G34135" "AT4G34390" "AT4G35180"
## [379] "AT4G36010" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370" "AT4G37390" "AT4G37850"
## [386] "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640" "AT5G01840"
## [393] "AT5G01980" "AT5G02260" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650"
## [400] "AT5G07690" "AT5G08335" "AT5G08790" "AT5G10390" "AT5G10440" "AT5G11160" "AT5G12930"
## [407] "AT5G12940" "AT5G13190" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G14760" "AT5G15190"
## [414] "AT5G17380" "AT5G17490" "AT5G17780" "AT5G18470" "AT5G19110" "AT5G20400" "AT5G20960"
## [421] "AT5G21280" "AT5G22060" "AT5G22300" "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205"
## [428] "AT5G24206" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G24910" "AT5G25250" "AT5G25930"
## [435] "AT5G26260" "AT5G26270" "AT5G27350" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990"
## [442] "AT5G39020" "AT5G39040" "AT5G39680" "AT5G41120" "AT5G41180" "AT5G41730" "AT5G41880"
## [449] "AT5G42380" "AT5G42440" "AT5G42650" "AT5G43910" "AT5G44070" "AT5G44350" "AT5G44635"
## [456] "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830" "AT5G52020" "AT5G52120"
## [463] "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52882" "AT5G52910" "AT5G53290"
## [470] "AT5G54300" "AT5G54470" "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860"
## [477] "AT5G55450" "AT5G56960" "AT5G57340" "AT5G57800" "AT5G59720" "AT5G60280" "AT5G60890"
## [484] "AT5G60900" "AT5G61890" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62470" "AT5G62770"
## [491] "AT5G62920" "AT5G63450" "AT5G64170" "AT5G64750" "AT5G64810" "AT5G64870" "AT5G65280"
## [498] "AT5G66052" "AT5G66640" "AT5G66890" "AT5G67150" "AT5G67160" "AT5G67340" "ATCG00020"
## [505] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [512] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [519] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [526] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [533] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $`M12-A12_up_down`
## [1] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01340"
## [8] "AT1G01370" "AT1G01430" "AT1G01480" "AT1G01520" "AT1G01560" "AT1G01590" "AT1G01610"
## [15] "AT1G01620" "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390"
## [22] "AT1G02405" "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02640" "AT1G02650" "AT1G02660"
## [29] "AT1G02700" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03180" "AT1G03210" "AT1G03290"
## [36] "AT1G03300" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03600" "AT1G03630" "AT1G03660"
## [43] "AT1G03680" "AT1G03850" "AT1G03870" "AT1G03990" "AT1G04040" "AT1G04160" "AT1G04310"
## [50] "AT1G04360" "AT1G04420" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [57] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05310" "AT1G05340" "AT1G05420" "AT1G05570"
## [64] "AT1G05680" "AT1G05835" "AT1G05880" "AT1G06160" "AT1G06180" "AT1G06240" "AT1G06250"
## [71] "AT1G06260" "AT1G06265" "AT1G06460" "AT1G06620" "AT1G06660" "AT1G06680" "AT1G06850"
## [78] "AT1G07000" "AT1G07020" "AT1G07110" "AT1G07320" "AT1G07430" "AT1G07440" "AT1G07476"
## [85] "AT1G07485" "AT1G07490" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620"
## [92] "AT1G07630" "AT1G07880" "AT1G08050" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08630"
## [99] "AT1G08810" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240" "AT1G09340"
## [106] "AT1G09350" "AT1G09440" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09750" "AT1G09794"
## [113] "AT1G09930" "AT1G09932" "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10380" "AT1G10410"
## [120] "AT1G10417" "AT1G10520" "AT1G10585" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10910"
## [127] "AT1G10960" "AT1G11000" "AT1G11100" "AT1G11130" "AT1G11330" "AT1G11362" "AT1G11400"
## [134] "AT1G11480" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11785" "AT1G11860" "AT1G11905"
## [141] "AT1G11925" "AT1G12060" "AT1G12090" "AT1G12250" "AT1G12320" "AT1G12500" "AT1G12540"
## [148] "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150" "AT1G13250" "AT1G13310" "AT1G13330"
## [155] "AT1G13340" "AT1G13380" "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550"
## [162] "AT1G13650" "AT1G13790" "AT1G13990" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14180"
## [169] "AT1G14185" "AT1G14260" "AT1G14270" "AT1G14330" "AT1G14345" "AT1G14440" "AT1G14540"
## [176] "AT1G14687" "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G14900" "AT1G15000"
## [183] "AT1G15010" "AT1G15040" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180" "AT1G15260"
## [190] "AT1G15290" "AT1G15380" "AT1G15405" "AT1G15415" "AT1G15510" "AT1G15520" "AT1G15550"
## [197] "AT1G15670" "AT1G15690" "AT1G15790" "AT1G15800" "AT1G15820" "AT1G15980" "AT1G15990"
## [204] "AT1G16080" "AT1G16150" "AT1G16300" "AT1G16410" "AT1G16420" "AT1G16500" "AT1G16670"
## [211] "AT1G16720" "AT1G17020" "AT1G17100" "AT1G17200" "AT1G17380" "AT1G17490" "AT1G17500"
## [218] "AT1G17600" "AT1G17615" "AT1G17650" "AT1G17745" "AT1G17750" "AT1G17850" "AT1G18000"
## [225] "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18570" "AT1G18620" "AT1G18650"
## [232] "AT1G18735" "AT1G18890" "AT1G19020" "AT1G19150" "AT1G19160" "AT1G19180" "AT1G19200"
## [239] "AT1G19220" "AT1G19230" "AT1G19250" "AT1G19270" "AT1G19350" "AT1G19450" "AT1G19490"
## [246] "AT1G19640" "AT1G20010" "AT1G20020" "AT1G20190" "AT1G20310" "AT1G20340" "AT1G20470"
## [253] "AT1G20740" "AT1G20780" "AT1G20823" "AT1G21000" "AT1G21100" "AT1G21200" "AT1G21210"
## [260] "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21500" "AT1G21520"
## [267] "AT1G21525" "AT1G21680" "AT1G21740" "AT1G21880" "AT1G21910" "AT1G21930" "AT1G22180"
## [274] "AT1G22220" "AT1G22280" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22403" "AT1G22410"
## [281] "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22550" "AT1G22590" "AT1G22840" "AT1G22850"
## [288] "AT1G22985" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23120" "AT1G23200"
## [295] "AT1G23205" "AT1G23340" "AT1G23470" "AT1G23480" "AT1G23530" "AT1G23550" "AT1G23560"
## [302] "AT1G23740" "AT1G23840" "AT1G23850" "AT1G23935" "AT1G23940" "AT1G24140" "AT1G24145"
## [309] "AT1G24147" "AT1G24150" "AT1G24577" "AT1G25240" "AT1G25400" "AT1G25450" "AT1G26130"
## [316] "AT1G26150" "AT1G26200" "AT1G26230" "AT1G26250" "AT1G26290" "AT1G26330" "AT1G26380"
## [323] "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26761" "AT1G26762" "AT1G26810" "AT1G26930"
## [330] "AT1G27020" "AT1G27110" "AT1G27210" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [337] "AT1G27980" "AT1G28190" "AT1G28330" "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29090"
## [344] "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460"
## [351] "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29670" "AT1G29680"
## [358] "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980" "AT1G30020" "AT1G30040"
## [365] "AT1G30135" "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30360" "AT1G30380" "AT1G30473"
## [372] "AT1G30520" "AT1G30620" "AT1G30700" "AT1G30755" "AT1G30760" "AT1G30814" "AT1G30840"
## [379] "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330"
## [386] "AT1G31540" "AT1G31550" "AT1G31710" "AT1G31835" "AT1G31900" "AT1G31950" "AT1G32060"
## [393] "AT1G32080" "AT1G32200" "AT1G32210" "AT1G32220" "AT1G32350" "AT1G32470" "AT1G32540"
## [400] "AT1G32550" "AT1G32560" "AT1G32760" "AT1G32860" "AT1G32870" "AT1G32910" "AT1G32920"
## [407] "AT1G32940" "AT1G32950" "AT1G32960" "AT1G32990" "AT1G33030" "AT1G33240" "AT1G33420"
## [414] "AT1G33430" "AT1G33440" "AT1G33560" "AT1G33600" "AT1G33720" "AT1G33730" "AT1G33770"
## [421] "AT1G33811" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140"
## [428] "AT1G35210" "AT1G35230" "AT1G35420" "AT1G35580" "AT1G35680" "AT1G35710" "AT1G35910"
## [435] "AT1G36622" "AT1G36675" "AT1G42970" "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910"
## [442] "AT1G44130" "AT1G44575" "AT1G45145" "AT1G45163" "AT1G45165" "AT1G45545" "AT1G46480"
## [449] "AT1G47056" "AT1G47440" "AT1G47510" "AT1G47670" "AT1G48000" "AT1G48030" "AT1G48315"
## [456] "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010" "AT1G49050" "AT1G49200"
## [463] "AT1G49230" "AT1G49320" "AT1G49380" "AT1G49450" "AT1G49650" "AT1G49730" "AT1G49900"
## [470] "AT1G50420" "AT1G50450" "AT1G50560" "AT1G50732" "AT1G50740" "AT1G50900" "AT1G50910"
## [477] "AT1G51080" "AT1G51110" "AT1G51130" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780"
## [484] "AT1G51790" "AT1G51800" "AT1G51860" "AT1G51890" "AT1G51940" "AT1G52000" "AT1G52190"
## [491] "AT1G52200" "AT1G52230" "AT1G52240" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690"
## [498] "AT1G52855" "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53230" "AT1G53233" "AT1G53250"
## [505] "AT1G53300" "AT1G53620" "AT1G53625" "AT1G53700" "AT1G53830" "AT1G53920" "AT1G54100"
## [512] "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54730" "AT1G54740" "AT1G54780" "AT1G54820"
## [519] "AT1G54890" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490" "AT1G55610" "AT1G55670"
## [526] "AT1G55790" "AT1G56120" "AT1G56210" "AT1G56240" "AT1G56242" "AT1G56430" "AT1G56470"
## [533] "AT1G56500" "AT1G56550" "AT1G56650" "AT1G56660" "AT1G56710" "AT1G56720" "AT1G57560"
## [540] "AT1G57630" "AT1G57650" "AT1G57943" "AT1G57990" "AT1G58150" "AT1G58370" "AT1G59590"
## [547] "AT1G59640" "AT1G59740" "AT1G59840" "AT1G59950" "AT1G60000" "AT1G60160" "AT1G60190"
## [554] "AT1G60390" "AT1G60420" "AT1G60550" "AT1G60590" "AT1G60600" "AT1G60610" "AT1G60690"
## [561] "AT1G60700" "AT1G60730" "AT1G60800" "AT1G60890" "AT1G60950" "AT1G61065" "AT1G61140"
## [568] "AT1G61160" "AT1G61215" "AT1G61240" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [575] "AT1G61520" "AT1G61550" "AT1G61560" "AT1G61795" "AT1G61800" "AT1G61810" "AT1G61820"
## [582] "AT1G62300" "AT1G62422" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62570" "AT1G62580"
## [589] "AT1G62750" "AT1G62760" "AT1G62840" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63245"
## [596] "AT1G63400" "AT1G63440" "AT1G63460" "AT1G63480" "AT1G63720" "AT1G63740" "AT1G63820"
## [603] "AT1G63840" "AT1G64065" "AT1G64150" "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64610"
## [610] "AT1G64625" "AT1G64660" "AT1G64680" "AT1G64720" "AT1G64770" "AT1G65230" "AT1G65483"
## [617] "AT1G65490" "AT1G65590" "AT1G65610" "AT1G65690" "AT1G65860" "AT1G65900" "AT1G66040"
## [624] "AT1G66090" "AT1G66100" "AT1G66130" "AT1G66140" "AT1G66170" "AT1G66180" "AT1G66280"
## [631] "AT1G66410" "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725"
## [638] "AT1G66810" "AT1G66820" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67040" "AT1G67060"
## [645] "AT1G67070" "AT1G67090" "AT1G67190" "AT1G67195" "AT1G67360" "AT1G67520" "AT1G67590"
## [652] "AT1G67635" "AT1G67650" "AT1G67700" "AT1G67740" "AT1G67750" "AT1G67800" "AT1G67810"
## [659] "AT1G67850" "AT1G67856" "AT1G67970" "AT1G67980" "AT1G68010" "AT1G68190" "AT1G68200"
## [666] "AT1G68238" "AT1G68250" "AT1G68390" "AT1G68400" "AT1G68440" "AT1G68520" "AT1G68530"
## [673] "AT1G68560" "AT1G68620" "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68810" "AT1G68820"
## [680] "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940" "AT1G69050" "AT1G69140" "AT1G69260"
## [687] "AT1G69480" "AT1G69490" "AT1G69520" "AT1G69530" "AT1G69610" "AT1G69720" "AT1G69790"
## [694] "AT1G69840" "AT1G69880" "AT1G69930" "AT1G70220" "AT1G70280" "AT1G70370" "AT1G70410"
## [701] "AT1G70430" "AT1G70460" "AT1G70480" "AT1G70500" "AT1G70640" "AT1G70690" "AT1G70760"
## [708] "AT1G70810" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71100" "AT1G71520" "AT1G71690"
## [715] "AT1G71697" "AT1G71870" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125" "AT1G72140"
## [722] "AT1G72220" "AT1G72240" "AT1G72270" "AT1G72310" "AT1G72330" "AT1G72420" "AT1G72430"
## [729] "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700"
## [736] "AT1G72770" "AT1G72810" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [743] "AT1G72950" "AT1G73010" "AT1G73066" "AT1G73110" "AT1G73260" "AT1G73325" "AT1G73550"
## [750] "AT1G73590" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73965" "AT1G74070" "AT1G74080"
## [757] "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74370" "AT1G74470" "AT1G74670" "AT1G74710"
## [764] "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75170" "AT1G75250" "AT1G75360" "AT1G75388"
## [771] "AT1G75390" "AT1G75500" "AT1G75510" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [778] "AT1G75800" "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470"
## [785] "AT1G76590" "AT1G76610" "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000"
## [792] "AT1G77131" "AT1G77145" "AT1G77210" "AT1G77280" "AT1G77400" "AT1G77490" "AT1G77500"
## [799] "AT1G77630" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78020" "AT1G78060"
## [806] "AT1G78190" "AT1G78260" "AT1G78320" "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78450"
## [813] "AT1G78460" "AT1G78570" "AT1G78780" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G78970"
## [820] "AT1G78995" "AT1G79060" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79760" "AT1G79770"
## [827] "AT1G79900" "AT1G80030" "AT1G80080" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300"
## [834] "AT1G80450" "AT1G80520" "AT1G80530" "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630"
## [841] "AT1G80640" "AT1G80690" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01420" "AT2G01540"
## [848] "AT2G01590" "AT2G01630" "AT2G01650" "AT2G01760" "AT2G01818" "AT2G01990" "AT2G02020"
## [855] "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02390" "AT2G02780"
## [862] "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03090" "AT2G03270" "AT2G03420" "AT2G03750"
## [869] "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100" "AT2G04380" "AT2G04400" "AT2G04430"
## [876] "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04780" "AT2G04790" "AT2G04900" "AT2G05070"
## [883] "AT2G05160" "AT2G05320" "AT2G05630" "AT2G05790" "AT2G05910" "AT2G05914" "AT2G05940"
## [890] "AT2G05995" "AT2G06255" "AT2G06850" "AT2G07687" "AT2G07688" "AT2G07732" "AT2G10940"
## [897] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13790" "AT2G13810" "AT2G13820" "AT2G13960"
## [904] "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620" "AT2G14800" "AT2G14880" "AT2G14890"
## [911] "AT2G15090" "AT2G15400" "AT2G15440" "AT2G15760" "AT2G15860" "AT2G15880" "AT2G16060"
## [918] "AT2G16270" "AT2G16367" "AT2G16530" "AT2G16630" "AT2G16700" "AT2G16710" "AT2G16720"
## [925] "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17230" "AT2G17500" "AT2G17720"
## [932] "AT2G17740" "AT2G17780" "AT2G18000" "AT2G18300" "AT2G18560" "AT2G18660" "AT2G18690"
## [939] "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170" "AT2G19190" "AT2G19620" "AT2G19690"
## [946] "AT2G19710" "AT2G19800" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20180" "AT2G20210"
## [953] "AT2G20290" "AT2G20340" "AT2G20680" "AT2G20825" "AT2G20890" "AT2G21050" "AT2G21080"
## [960] "AT2G21140" "AT2G21188" "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21660"
## [967] "AT2G21780" "AT2G21830" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [974] "AT2G22770" "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23030" "AT2G23100"
## [981] "AT2G23110" "AT2G23130" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23590" "AT2G23600"
## [988] "AT2G23680" "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24060" "AT2G24090" "AT2G24150"
## [995] "AT2G24170" "AT2G24240" "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24580"
## [ reached getOption("max.print") -- omitted 2203 entries ]
##
## $`M12-V12_up_down`
## [1] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" "AT1G01430" "AT1G01470" "AT1G01480"
## [8] "AT1G01520" "AT1G01560" "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205"
## [15] "AT1G02220" "AT1G02230" "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02640"
## [22] "AT1G02650" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03130" "AT1G03300" "AT1G03457"
## [29] "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04310" "AT1G04490" "AT1G04570" "AT1G04700"
## [36] "AT1G04730" "AT1G04780" "AT1G04980" "AT1G05100" "AT1G05420" "AT1G05680" "AT1G05690"
## [43] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06160" "AT1G06180" "AT1G06570"
## [50] "AT1G06620" "AT1G06760" "AT1G07150" "AT1G07300" "AT1G07430" "AT1G07500" "AT1G07590"
## [57] "AT1G07600" "AT1G07610" "AT1G07670" "AT1G07880" "AT1G08050" "AT1G08300" "AT1G08380"
## [64] "AT1G08560" "AT1G08860" "AT1G08900" "AT1G08920" "AT1G09080" "AT1G09180" "AT1G09200"
## [71] "AT1G09240" "AT1G09350" "AT1G09440" "AT1G09530" "AT1G09750" "AT1G09950" "AT1G10020"
## [78] "AT1G10230" "AT1G10340" "AT1G10380" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [85] "AT1G10586" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G10910" "AT1G10930"
## [92] "AT1G10990" "AT1G11000" "AT1G11185" "AT1G11350" "AT1G11380" "AT1G11400" "AT1G11480"
## [99] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12460" "AT1G12540" "AT1G12700" "AT1G12730"
## [106] "AT1G12860" "AT1G13110" "AT1G13280" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650"
## [113] "AT1G13700" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14070" "AT1G14120"
## [120] "AT1G14180" "AT1G14185" "AT1G14260" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15010"
## [127] "AT1G15100" "AT1G15110" "AT1G15125" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [134] "AT1G15430" "AT1G15520" "AT1G15550" "AT1G15670" "AT1G15890" "AT1G15980" "AT1G15990"
## [141] "AT1G16300" "AT1G16640" "AT1G16850" "AT1G17147" "AT1G17380" "AT1G17420" "AT1G17500"
## [148] "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G17990" "AT1G18000"
## [155] "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550" "AT1G18620"
## [162] "AT1G18650" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19340"
## [169] "AT1G19490" "AT1G19570" "AT1G19610" "AT1G19620" "AT1G19640" "AT1G19650" "AT1G19670"
## [176] "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310" "AT1G20440" "AT1G20450"
## [183] "AT1G20640" "AT1G20970" "AT1G21000" "AT1G21050" "AT1G21120" "AT1G21130" "AT1G21326"
## [190] "AT1G21410" "AT1G21520" "AT1G21525" "AT1G21550" "AT1G21580" "AT1G21910" "AT1G21920"
## [197] "AT1G22220" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490"
## [204] "AT1G22590" "AT1G22740" "AT1G22770" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080"
## [211] "AT1G23120" "AT1G23200" "AT1G23205" "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23550"
## [218] "AT1G23750" "AT1G23850" "AT1G24090" "AT1G24145" "AT1G24147" "AT1G24210" "AT1G24600"
## [225] "AT1G25422" "AT1G25425" "AT1G25440" "AT1G25450" "AT1G25500" "AT1G26150" "AT1G26420"
## [232] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26800" "AT1G26920" "AT1G26930"
## [239] "AT1G26960" "AT1G27020" "AT1G27110" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [246] "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G28360"
## [253] "AT1G28370" "AT1G28400" "AT1G28480" "AT1G28660" "AT1G28670" "AT1G29050" "AT1G29195"
## [260] "AT1G29290" "AT1G29330" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [267] "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320" "AT1G30520" "AT1G30620" "AT1G30814"
## [281] "AT1G30840" "AT1G30850" "AT1G31120" "AT1G31173" "AT1G31290" "AT1G31355" "AT1G31550"
## [288] "AT1G31820" "AT1G31835" "AT1G31900" "AT1G31920" "AT1G31950" "AT1G32560" "AT1G32640"
## [295] "AT1G32730" "AT1G32740" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33055" "AT1G33110"
## [302] "AT1G33240" "AT1G33260" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34180" "AT1G34315"
## [309] "AT1G34420" "AT1G35140" "AT1G35210" "AT1G36940" "AT1G42980" "AT1G43160" "AT1G43245"
## [316] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G44900" "AT1G45145" "AT1G47510"
## [323] "AT1G47890" "AT1G48000" "AT1G48100" "AT1G48260" "AT1G48315" "AT1G48320" "AT1G48370"
## [330] "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49050" "AT1G49200" "AT1G49230" "AT1G49450"
## [337] "AT1G49520" "AT1G50040" "AT1G50180" "AT1G50260" "AT1G50590" "AT1G50640" "AT1G50732"
## [344] "AT1G51140" "AT1G51400" "AT1G51402" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G51850"
## [351] "AT1G51920" "AT1G51940" "AT1G52030" "AT1G52190" "AT1G52230" "AT1G52315" "AT1G52565"
## [358] "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52750" "AT1G52760" "AT1G52770" "AT1G52800"
## [365] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53070" "AT1G53230" "AT1G53233"
## [372] "AT1G53320" "AT1G53410" "AT1G53470" "AT1G53560" "AT1G53620" "AT1G53625" "AT1G53760"
## [379] "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100" "AT1G54120" "AT1G54130" "AT1G54570"
## [386] "AT1G54730" "AT1G54740" "AT1G54820" "AT1G54890" "AT1G55330" "AT1G55370" "AT1G55610"
## [393] "AT1G56220" "AT1G56580" "AT1G56720" "AT1G57560" "AT1G57610" "AT1G57630" "AT1G57650"
## [400] "AT1G57943" "AT1G58225" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740" "AT1G59950"
## [407] "AT1G60190" "AT1G60270" "AT1G60390" "AT1G60830" "AT1G60860" "AT1G61065" "AT1G61110"
## [414] "AT1G61120" "AT1G61140" "AT1G61190" "AT1G61215" "AT1G61240" "AT1G61255" "AT1G61260"
## [421] "AT1G61300" "AT1G61340" "AT1G61500" "AT1G61610" "AT1G61640" "AT1G61795" "AT1G61890"
## [428] "AT1G62520" "AT1G62790" "AT1G62840" "AT1G62910" "AT1G63080" "AT1G63245" "AT1G63260"
## [435] "AT1G63400" "AT1G63530" "AT1G63570" "AT1G63720" "AT1G63880" "AT1G64320" "AT1G64380"
## [442] "AT1G64610" "AT1G64620" "AT1G64625" "AT1G64660" "AT1G64670" "AT1G65295" "AT1G65500"
## [449] "AT1G65610" "AT1G65845" "AT1G66090" "AT1G66170" "AT1G66180" "AT1G66280" "AT1G66550"
## [456] "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G66810" "AT1G66920"
## [463] "AT1G66940" "AT1G67070" "AT1G67420" "AT1G67590" "AT1G68190" "AT1G68200" "AT1G68250"
## [470] "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68520" "AT1G68585" "AT1G68620"
## [477] "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69260" "AT1G69360" "AT1G69480"
## [484] "AT1G69600" "AT1G69610" "AT1G69780" "AT1G69790" "AT1G69840" "AT1G69870" "AT1G69930"
## [491] "AT1G70100" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [498] "AT1G70800" "AT1G70810" "AT1G70940" "AT1G71030" "AT1G71100" "AT1G71690" "AT1G71697"
## [505] "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72120" "AT1G72210" "AT1G72240" "AT1G72270"
## [512] "AT1G72330" "AT1G72416" "AT1G72430" "AT1G72450" "AT1G72520" "AT1G72600" "AT1G72610"
## [519] "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900"
## [526] "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010" "AT1G73110" "AT1G73390" "AT1G73480"
## [533] "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73890" "AT1G73965"
## [540] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74670" "AT1G74710" "AT1G74930" "AT1G74940"
## [547] "AT1G74950" "AT1G75020" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75220" "AT1G75250"
## [554] "AT1G75370" "AT1G75388" "AT1G75390" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580"
## [561] "AT1G75750" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76100" "AT1G76180" "AT1G76240"
## [568] "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650" "AT1G76760" "AT1G76790" "AT1G76960"
## [575] "AT1G76980" "AT1G77131" "AT1G77138" "AT1G77200" "AT1G77210" "AT1G77280" "AT1G77450"
## [582] "AT1G77500" "AT1G77510" "AT1G77640" "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890"
## [589] "AT1G77990" "AT1G78000" "AT1G78070" "AT1G78080" "AT1G78190" "AT1G78210" "AT1G78265"
## [596] "AT1G78270" "AT1G78380" "AT1G78450" "AT1G78570" "AT1G78820" "AT1G78830" "AT1G78860"
## [603] "AT1G78940" "AT1G79110" "AT1G79170" "AT1G79270" "AT1G79400" "AT1G79520" "AT1G79570"
## [610] "AT1G79760" "AT1G79960" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [617] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630" "AT1G80820" "AT1G80840" "AT1G80850"
## [624] "AT2G01340" "AT2G01420" "AT2G01450" "AT2G01630" "AT2G01860" "AT2G01890" "AT2G02020"
## [631] "AT2G02310" "AT2G02340" "AT2G02780" "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03310"
## [638] "AT2G03470" "AT2G03750" "AT2G03760" "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450"
## [645] "AT2G05160" "AT2G05260" "AT2G05632" "AT2G05790" "AT2G05940" "AT2G06050" "AT2G06255"
## [652] "AT2G06850" "AT2G07680" "AT2G07690" "AT2G13550" "AT2G13650" "AT2G13960" "AT2G14050"
## [659] "AT2G14290" "AT2G14660" "AT2G14890" "AT2G15760" "AT2G15880" "AT2G15890" "AT2G16720"
## [666] "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17500" "AT2G17720" "AT2G17740" "AT2G17780"
## [673] "AT2G17880" "AT2G18090" "AT2G18196" "AT2G18300" "AT2G18560" "AT2G18690" "AT2G18890"
## [680] "AT2G18917" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20170"
## [687] "AT2G20180" "AT2G20825" "AT2G20880" "AT2G20950" "AT2G21188" "AT2G21350" "AT2G21640"
## [694] "AT2G21780" "AT2G22200" "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22810"
## [701] "AT2G22830" "AT2G22860" "AT2G22890" "AT2G23030" "AT2G23100" "AT2G23110" "AT2G23290"
## [708] "AT2G23340" "AT2G23450" "AT2G23600" "AT2G23760" "AT2G23810" "AT2G24170" "AT2G24210"
## [715] "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25200"
## [722] "AT2G25240" "AT2G25460" "AT2G25470" "AT2G25625" "AT2G25680" "AT2G25790" "AT2G25900"
## [729] "AT2G26480" "AT2G26530" "AT2G26710" "AT2G26870" "AT2G27310" "AT2G27500" "AT2G27505"
## [736] "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28040" "AT2G28050" "AT2G28120" "AT2G28200"
## [743] "AT2G28400" "AT2G28460" "AT2G28570" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950"
## [750] "AT2G29290" "AT2G29320" "AT2G29410" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470"
## [757] "AT2G29670" "AT2G30020" "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395"
## [764] "AT2G30400" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30540" "AT2G30550" "AT2G30720"
## [771] "AT2G30750" "AT2G30820" "AT2G30830" "AT2G30930" "AT2G31150" "AT2G31180" "AT2G31380"
## [778] "AT2G31751" "AT2G31940" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [785] "AT2G32210" "AT2G32235" "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33020"
## [792] "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33380" "AT2G33480" "AT2G33830" "AT2G34010"
## [799] "AT2G34070" "AT2G34080" "AT2G34500" "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34810"
## [806] "AT2G35170" "AT2G35260" "AT2G35290" "AT2G35550" "AT2G35590" "AT2G35700" "AT2G35710"
## [813] "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36050" "AT2G36080" "AT2G36200"
## [820] "AT2G36380" "AT2G36400" "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854"
## [827] "AT2G36970" "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37440" "AT2G37450" "AT2G37590"
## [834] "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870" "AT2G37950" "AT2G37980" "AT2G38240"
## [841] "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38640" "AT2G38750"
## [848] "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39180" "AT2G39210" "AT2G39250" "AT2G39350"
## [855] "AT2G39430" "AT2G39520" "AT2G39580" "AT2G39725" "AT2G39730" "AT2G39800" "AT2G39980"
## [862] "AT2G40100" "AT2G40140" "AT2G40340" "AT2G40435" "AT2G40530" "AT2G40610" "AT2G40620"
## [869] "AT2G40711" "AT2G40750" "AT2G40850" "AT2G41070" "AT2G41250" "AT2G41410" "AT2G41540"
## [876] "AT2G41550" "AT2G41660" "AT2G41730" "AT2G41820" "AT2G41835" "AT2G41870" "AT2G41940"
## [883] "AT2G42040" "AT2G42150" "AT2G42170" "AT2G42300" "AT2G42320" "AT2G42350" "AT2G42380"
## [890] "AT2G42530" "AT2G42540" "AT2G42560" "AT2G42690" "AT2G42760" "AT2G42940" "AT2G42960"
## [897] "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43150" "AT2G43320" "AT2G43445" "AT2G43535"
## [904] "AT2G43550" "AT2G44370" "AT2G44380" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44630"
## [911] "AT2G44740" "AT2G44810" "AT2G44840" "AT2G44940" "AT2G45180" "AT2G45210" "AT2G45760"
## [918] "AT2G45830" "AT2G45850" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [925] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [932] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47440" "AT2G47480" "AT2G47560"
## [939] "AT2G47670" "AT2G47770" "AT2G47780" "AT2G47920" "AT2G47930" "AT2G47950" "AT3G01280"
## [946] "AT3G01290" "AT3G01480" "AT3G01490" "AT3G01830" "AT3G01840" "AT3G02140" "AT3G02150"
## [953] "AT3G02160" "AT3G02370" "AT3G02510" "AT3G02640" "AT3G02875" "AT3G02990" "AT3G03310"
## [960] "AT3G03440" "AT3G03650" "AT3G03820" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060"
## [967] "AT3G04160" "AT3G04181" "AT3G04300" "AT3G04420" "AT3G04630" "AT3G04720" "AT3G04960"
## [974] "AT3G05320" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05740"
## [981] "AT3G05800" "AT3G05810" "AT3G05900" "AT3G05905" "AT3G06020" "AT3G06030" "AT3G06035"
## [988] "AT3G06070" "AT3G06140" "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06740" "AT3G06890"
## [995] "AT3G07010" "AT3G07210" "AT3G07340" "AT3G07350" "AT3G07460" "AT3G07540"
## [ reached getOption("max.print") -- omitted 1228 entries ]
##
## $`A12-V12_up_down`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" "AT1G01470" "AT1G01610" "AT1G01620"
## [8] "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02400"
## [15] "AT1G02405" "AT1G02460" "AT1G02470" "AT1G02920" "AT1G02930" "AT1G03020" "AT1G03210"
## [22] "AT1G03850" "AT1G04220" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07150" "AT1G07370"
## [29] "AT1G07610" "AT1G08200" "AT1G08450" "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420"
## [36] "AT1G09500" "AT1G09530" "AT1G09950" "AT1G10070" "AT1G10370" "AT1G10530" "AT1G10560"
## [43] "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12290" "AT1G12420" "AT1G13420"
## [50] "AT1G13520" "AT1G13740" "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G14880"
## [57] "AT1G15080" "AT1G15100" "AT1G15125" "AT1G15170" "AT1G15180" "AT1G15310" "AT1G15380"
## [64] "AT1G15670" "AT1G15890" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17020" "AT1G17147"
## [71] "AT1G17420" "AT1G17460" "AT1G17940" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G19570"
## [78] "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030" "AT1G20070"
## [85] "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G21120" "AT1G21520" "AT1G21525"
## [92] "AT1G21740" "AT1G22550" "AT1G22770" "AT1G25275" "AT1G25422" "AT1G25425" "AT1G25450"
## [99] "AT1G25500" "AT1G26290" "AT1G26380" "AT1G26420" "AT1G26730" "AT1G26770" "AT1G26800"
## [106] "AT1G26920" "AT1G27030" "AT1G27330" "AT1G27350" "AT1G27640" "AT1G27730" "AT1G28010"
## [113] "AT1G28050" "AT1G28360" "AT1G29330" "AT1G30240" "AT1G30420" "AT1G30860" "AT1G31710"
## [120] "AT1G32210" "AT1G32860" "AT1G32910" "AT1G33030" "AT1G33055" "AT1G33950" "AT1G33960"
## [127] "AT1G34210" "AT1G35670" "AT1G36622" "AT1G43160" "AT1G44350" "AT1G44900" "AT1G47890"
## [134] "AT1G48100" "AT1G48260" "AT1G49450" "AT1G49650" "AT1G50520" "AT1G50640" "AT1G51090"
## [141] "AT1G51500" "AT1G51780" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52030" "AT1G52200"
## [148] "AT1G52720" "AT1G53110" "AT1G53170" "AT1G53620" "AT1G54010" "AT1G54030" "AT1G54040"
## [155] "AT1G54095" "AT1G55260" "AT1G55490" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G56580"
## [162] "AT1G58180" "AT1G58225" "AT1G58270" "AT1G58590" "AT1G59740" "AT1G60190" "AT1G60270"
## [169] "AT1G61110" "AT1G61160" "AT1G61340" "AT1G61810" "AT1G61820" "AT1G62440" "AT1G62790"
## [176] "AT1G62975" "AT1G63040" "AT1G63460" "AT1G64150" "AT1G64380" "AT1G64390" "AT1G64620"
## [183] "AT1G64670" "AT1G65470" "AT1G65486" "AT1G65490" "AT1G65845" "AT1G65860" "AT1G66280"
## [190] "AT1G66345" "AT1G66960" "AT1G67420" "AT1G67520" "AT1G67630" "AT1G67810" "AT1G67980"
## [197] "AT1G68350" "AT1G68500" "AT1G68585" "AT1G69140" "AT1G69295" "AT1G69490" "AT1G69530"
## [204] "AT1G69543" "AT1G69600" "AT1G69720" "AT1G69870" "AT1G70300" "AT1G70640" "AT1G70700"
## [211] "AT1G71970" "AT1G72040" "AT1G72060" "AT1G72070" "AT1G72140" "AT1G72180" "AT1G73210"
## [218] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74590" "AT1G74950"
## [225] "AT1G75170" "AT1G75370" "AT1G75580" "AT1G75800" "AT1G75830" "AT1G76610" "AT1G76790"
## [232] "AT1G76960" "AT1G77145" "AT1G77680" "AT1G77920" "AT1G78060" "AT1G78070" "AT1G78080"
## [239] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79170" "AT1G79450" "AT1G79570"
## [246] "AT1G79960" "AT1G80060" "AT1G80120" "AT1G80460" "AT1G80530" "AT1G80580" "AT1G80820"
## [253] "AT1G80840" "AT1G80850" "AT2G01818" "AT2G01830" "AT2G01890" "AT2G02060" "AT2G02350"
## [260] "AT2G02360" "AT2G02930" "AT2G03760" "AT2G04080" "AT2G04515" "AT2G06050" "AT2G06255"
## [267] "AT2G07690" "AT2G14560" "AT2G14610" "AT2G16630" "AT2G17040" "AT2G17450" "AT2G18660"
## [274] "AT2G18969" "AT2G18970" "AT2G19190" "AT2G20880" "AT2G21140" "AT2G21185" "AT2G21187"
## [281] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23170" "AT2G23340"
## [288] "AT2G23760" "AT2G23840" "AT2G24040" "AT2G24210" "AT2G24240" "AT2G24390" "AT2G25130"
## [295] "AT2G25625" "AT2G26560" "AT2G27389" "AT2G27390" "AT2G27510" "AT2G27660" "AT2G27820"
## [302] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28790" "AT2G28940" "AT2G29350"
## [309] "AT2G29440" "AT2G29450" "AT2G29470" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G29950"
## [316] "AT2G30040" "AT2G30360" "AT2G30362" "AT2G30480" "AT2G30540" "AT2G30820" "AT2G30830"
## [323] "AT2G31020" "AT2G31380" "AT2G31730" "AT2G31865" "AT2G32160" "AT2G32235" "AT2G32240"
## [330] "AT2G32460" "AT2G32510" "AT2G32680" "AT2G32990" "AT2G33380" "AT2G33480" "AT2G33520"
## [337] "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960" "AT2G36380" "AT2G36590"
## [344] "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885" "AT2G37040" "AT2G37170"
## [351] "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G37750" "AT2G38530" "AT2G38540"
## [358] "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39320" "AT2G39980" "AT2G40110"
## [365] "AT2G40550" "AT2G40620" "AT2G40880" "AT2G41082" "AT2G41170" "AT2G41250" "AT2G41380"
## [372] "AT2G41440" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [379] "AT2G43000" "AT2G43018" "AT2G43020" "AT2G43150" "AT2G43535" "AT2G43550" "AT2G44370"
## [386] "AT2G44380" "AT2G44578" "AT2G44640" "AT2G44840" "AT2G44980" "AT2G45470" "AT2G45510"
## [393] "AT2G45960" "AT2G46370" "AT2G46380" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [400] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G02820" "AT3G03190"
## [407] "AT3G03470" "AT3G03610" "AT3G03650" "AT3G03780" "AT3G03980" "AT3G04000" "AT3G04010"
## [414] "AT3G04070" "AT3G04630" "AT3G04720" "AT3G05640" "AT3G05740" "AT3G05800" "AT3G05810"
## [421] "AT3G05870" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G07580"
## [428] "AT3G07600" "AT3G07800" "AT3G08030" "AT3G08670" "AT3G09032" "AT3G09940" "AT3G10320"
## [435] "AT3G10985" "AT3G11000" "AT3G11090" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [442] "AT3G12120" "AT3G12145" "AT3G12220" "AT3G12230" "AT3G12920" "AT3G13230" "AT3G13433"
## [449] "AT3G13437" "AT3G13790" "AT3G14067" "AT3G14280" "AT3G14700" "AT3G14740" "AT3G14870"
## [456] "AT3G15210" "AT3G15518" "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450"
## [463] "AT3G16460" "AT3G16500" "AT3G17120" "AT3G17510" "AT3G17860" "AT3G18250" "AT3G18730"
## [470] "AT3G19390" "AT3G19615" "AT3G19660" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G20340"
## [477] "AT3G21670" "AT3G21780" "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22460" "AT3G22560"
## [484] "AT3G23740" "AT3G23810" "AT3G24518" "AT3G24520" "AT3G25700" "AT3G25760" "AT3G25770"
## [491] "AT3G25780" "AT3G26060" "AT3G26210" "AT3G26220" "AT3G26230" "AT3G26440" "AT3G26470"
## [498] "AT3G26500" "AT3G26520" "AT3G27170" "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28540"
## [505] "AT3G28570" "AT3G28600" "AT3G28850" "AT3G28950" "AT3G29240" "AT3G43250" "AT3G43270"
## [512] "AT3G44300" "AT3G44490" "AT3G44870" "AT3G45140" "AT3G45290" "AT3G45330" "AT3G45860"
## [519] "AT3G45930" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47830" "AT3G47836"
## [526] "AT3G47960" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48490" "AT3G48510" "AT3G48520"
## [533] "AT3G48630" "AT3G48640" "AT3G48720" "AT3G49110" "AT3G49130" "AT3G49540" "AT3G49870"
## [540] "AT3G50260" "AT3G50410" "AT3G50550" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G51250"
## [547] "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920" "AT3G52290" "AT3G52630" "AT3G52748"
## [554] "AT3G53150" "AT3G53235" "AT3G53370" "AT3G53420" "AT3G54150" "AT3G54820" "AT3G54830"
## [561] "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260" "AT3G56270" "AT3G56500"
## [568] "AT3G56870" "AT3G56891" "AT3G57020" "AT3G57157" "AT3G57240" "AT3G57550" "AT3G57760"
## [575] "AT3G59050" "AT3G59052" "AT3G59100" "AT3G59710" "AT3G59940" "AT3G59970" "AT3G60220"
## [582] "AT3G60490" "AT3G60540" "AT3G61198" "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61490"
## [589] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62590" "AT3G62600" "AT3G62700" "AT3G62860"
## [596] "AT3G63030" "AT3G63200" "AT4G00360" "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030"
## [603] "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060" "AT4G02110" "AT4G02360" "AT4G02520"
## [610] "AT4G04620" "AT4G04740" "AT4G04840" "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06534"
## [617] "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08770" "AT4G08870" "AT4G09750" "AT4G10290"
## [624] "AT4G10390" "AT4G10860" "AT4G11070" "AT4G11300" "AT4G11320" "AT4G12000" "AT4G12005"
## [631] "AT4G12030" "AT4G12410" "AT4G13770" "AT4G13860" "AT4G13900" "AT4G14020" "AT4G14040"
## [638] "AT4G14440" "AT4G14800" "AT4G15100" "AT4G15210" "AT4G15530" "AT4G15610" "AT4G15770"
## [645] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G17660"
## [652] "AT4G18360" "AT4G18440" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21060"
## [659] "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21610" "AT4G21730" "AT4G21780" "AT4G21790"
## [666] "AT4G22010" "AT4G22520" "AT4G22620" "AT4G23060" "AT4G23260" "AT4G23271" "AT4G23420"
## [673] "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960" "AT4G24972" "AT4G25000" "AT4G25070"
## [680] "AT4G25433" "AT4G25700" "AT4G25830" "AT4G25900" "AT4G26700" "AT4G27350" "AT4G27410"
## [687] "AT4G27520" "AT4G27590" "AT4G27745" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G28310"
## [694] "AT4G28390" "AT4G28405" "AT4G29740" "AT4G30180" "AT4G30210" "AT4G30440" "AT4G30530"
## [701] "AT4G30640" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780" "AT4G32785" "AT4G32870"
## [708] "AT4G33220" "AT4G33355" "AT4G33467" "AT4G33925" "AT4G33970" "AT4G34060" "AT4G34135"
## [715] "AT4G34200" "AT4G34290" "AT4G34650" "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320"
## [722] "AT4G35480" "AT4G35550" "AT4G35560" "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36710"
## [729] "AT4G36780" "AT4G36900" "AT4G37310" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37520"
## [736] "AT4G37760" "AT4G37990" "AT4G38080" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810"
## [743] "AT4G39190" "AT4G39330" "AT4G39350" "AT4G39580" "AT4G39980" "AT5G01210" "AT5G01215"
## [750] "AT5G01550" "AT5G01610" "AT5G01760" "AT5G01840" "AT5G02170" "AT5G02460" "AT5G02502"
## [757] "AT5G02520" "AT5G02690" "AT5G03030" "AT5G03285" "AT5G04180" "AT5G04200" "AT5G04250"
## [764] "AT5G04530" "AT5G04770" "AT5G05270" "AT5G05300" "AT5G05440" "AT5G06310" "AT5G06570"
## [771] "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07650" "AT5G07660" "AT5G07690" "AT5G07700"
## [778] "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08640" "AT5G08760" "AT5G09290"
## [785] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10390" "AT5G10400" "AT5G10440" "AT5G10720"
## [792] "AT5G11920" "AT5G11950" "AT5G12860" "AT5G13220" "AT5G13400" "AT5G14200" "AT5G14420"
## [799] "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240" "AT5G15860"
## [806] "AT5G15870" "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17330" "AT5G17460"
## [813] "AT5G17490" "AT5G17520" "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20400"
## [820] "AT5G20740" "AT5G20960" "AT5G21280" "AT5G22500" "AT5G22740" "AT5G22880" "AT5G23010"
## [827] "AT5G23420" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155" "AT5G24205"
## [834] "AT5G24206" "AT5G24230" "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780"
## [841] "AT5G24910" "AT5G24920" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26260" "AT5G26731"
## [848] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38005"
## [855] "AT5G38120" "AT5G38130" "AT5G38900" "AT5G39320" "AT5G39520" "AT5G39680" "AT5G39950"
## [862] "AT5G40010" "AT5G40240" "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G40690"
## [869] "AT5G40720" "AT5G41120" "AT5G41160" "AT5G41315" "AT5G41590" "AT5G41600" "AT5G41880"
## [876] "AT5G42530" "AT5G42650" "AT5G42830" "AT5G42900" "AT5G43170" "AT5G43910" "AT5G44050"
## [883] "AT5G44210" "AT5G44420" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G45950" "AT5G46230"
## [890] "AT5G46500" "AT5G47220" "AT5G47240" "AT5G47330" "AT5G48180" "AT5G48290" "AT5G49690"
## [897] "AT5G50460" "AT5G52050" "AT5G52310" "AT5G52720" "AT5G52882" "AT5G52910" "AT5G52990"
## [904] "AT5G53200" "AT5G53760" "AT5G53820" "AT5G54300" "AT5G54490" "AT5G54500" "AT5G54840"
## [911] "AT5G55090" "AT5G55180" "AT5G55460" "AT5G55530" "AT5G56050" "AT5G56120" "AT5G56760"
## [918] "AT5G56870" "AT5G56880" "AT5G57010" "AT5G57100" "AT5G57260" "AT5G57550" "AT5G57800"
## [925] "AT5G58480" "AT5G58840" "AT5G58900" "AT5G59030" "AT5G59050" "AT5G59080" "AT5G59090"
## [932] "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59530" "AT5G59662" "AT5G59760" "AT5G59890"
## [939] "AT5G60530" "AT5G60850" "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61000" "AT5G61070"
## [946] "AT5G61160" "AT5G61460" "AT5G61490" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [953] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63135" "AT5G63240"
## [960] "AT5G63450" "AT5G63550" "AT5G64000" "AT5G64170" "AT5G64190" "AT5G64260" "AT5G64280"
## [967] "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280" "AT5G65350" "AT5G65360"
## [974] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66170" "AT5G66590" "AT5G66650" "AT5G67070"
## [981] "AT5G67100" "AT5G67180" "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"
## [988] "AT5G67600"up <- DEG_list$Up; names(up) <- paste(names(up), "_up", sep="")
up## $`M1-A1_up`
## [1] "AT3G21870" "ATCG01310"
##
## $`M1-V1_up`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G02710" "AT1G02820" "AT1G03050" "AT1G03055" "AT1G03300" "AT1G03360" "AT1G04220"
## [15] "AT1G04250" "AT1G04530" "AT1G04550" "AT1G04660" "AT1G04770" "AT1G05560" "AT1G05562"
## [22] "AT1G05680" "AT1G07010" "AT1G07180" "AT1G07485" "AT1G07490" "AT1G08610" "AT1G09180"
## [29] "AT1G09820" "AT1G09900" "AT1G10460" "AT1G10960" "AT1G12330" "AT1G12370" "AT1G13030"
## [36] "AT1G13080" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150" "AT1G14345"
## [43] "AT1G14840" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15870" "AT1G16350" "AT1G16390"
## [50] "AT1G16730" "AT1G17050" "AT1G18800" "AT1G19140" "AT1G19150" "AT1G19450" "AT1G19700"
## [57] "AT1G21500" "AT1G22590" "AT1G22850" "AT1G23100" "AT1G23410" "AT1G23740" "AT1G24148"
## [64] "AT1G26220" "AT1G26390" "AT1G26761" "AT1G27120" "AT1G27480" "AT1G28010" "AT1G29600"
## [71] "AT1G29660" "AT1G30960" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760" "AT1G32900"
## [78] "AT1G33170" "AT1G33410" "AT1G42550" "AT1G42970" "AT1G44000" "AT1G44446" "AT1G48100"
## [85] "AT1G48480" "AT1G48570" "AT1G49010" "AT1G49430" "AT1G49490" "AT1G49660" "AT1G50840"
## [92] "AT1G51080" "AT1G51100" "AT1G51310" "AT1G52830" "AT1G53090" "AT1G54500" "AT1G55260"
## [99] "AT1G55960" "AT1G58520" "AT1G59700" "AT1G61300" "AT1G62170" "AT1G62180" "AT1G62630"
## [106] "AT1G62720" "AT1G62750" "AT1G62760" "AT1G62960" "AT1G63250" "AT1G64220" "AT1G64500"
## [113] "AT1G64600" "AT1G64670" "AT1G64680" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [120] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65920" "AT1G66130"
## [127] "AT1G66330" "AT1G66540" "AT1G66725" "AT1G66840" "AT1G67590" "AT1G67750" "AT1G68440"
## [134] "AT1G69200" "AT1G70000" "AT1G70250" "AT1G70580" "AT1G71850" "AT1G72040" "AT1G72270"
## [141] "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870" "AT1G73890"
## [148] "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280" "AT1G76240" "AT1G77580"
## [155] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G80270" "AT1G80760"
## [162] "AT2G01280" "AT2G01890" "AT2G02150" "AT2G02230" "AT2G03550" "AT2G04030" "AT2G04039"
## [169] "AT2G04790" "AT2G05160" "AT2G11890" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G17972"
## [176] "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19670" "AT2G20020" "AT2G20585" "AT2G21185"
## [183] "AT2G21187" "AT2G21320" "AT2G21330" "AT2G22240" "AT2G23290" "AT2G23340" "AT2G23430"
## [190] "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440" "AT2G24540" "AT2G24545" "AT2G24580"
## [197] "AT2G24762" "AT2G24820" "AT2G25530" "AT2G25680" "AT2G26080" "AT2G26692" "AT2G27420"
## [204] "AT2G28790" "AT2G29090" "AT2G30100" "AT2G30150" "AT2G30520" "AT2G30760" "AT2G31380"
## [211] "AT2G31750" "AT2G31751" "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33855"
## [218] "AT2G35760" "AT2G35950" "AT2G36000" "AT2G36590" "AT2G36750" "AT2G36800" "AT2G37240"
## [225] "AT2G37460" "AT2G37630" "AT2G37970" "AT2G38750" "AT2G38760" "AT2G39730" "AT2G41050"
## [232] "AT2G41250" "AT2G41290" "AT2G41660" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43650"
## [239] "AT2G43710" "AT2G45340" "AT2G46670" "AT2G46790" "AT2G46810" "AT2G46830" "AT2G47370"
## [246] "AT2G47450" "AT2G47485" "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180"
## [253] "AT3G01440" "AT3G02830" "AT3G04140" "AT3G04950" "AT3G06145" "AT3G06520" "AT3G06750"
## [260] "AT3G06920" "AT3G07310" "AT3G07750" "AT3G07770" "AT3G09160" "AT3G09162" "AT3G09190"
## [267] "AT3G09600" "AT3G09650" "AT3G10040" "AT3G10110" "AT3G10525" "AT3G11090" "AT3G11110"
## [274] "AT3G12320" "AT3G13470" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15540" "AT3G15850"
## [281] "AT3G15990" "AT3G16520" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840" "AT3G18750"
## [288] "AT3G19000" "AT3G19440" "AT3G19450" "AT3G19480" "AT3G21390" "AT3G21460" "AT3G21890"
## [295] "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G23090" "AT3G23210" "AT3G23510"
## [302] "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190" "AT3G24460" "AT3G25030" "AT3G25670"
## [309] "AT3G26570" "AT3G27350" "AT3G27415" "AT3G27416" "AT3G28040" "AT3G28540" "AT3G30460"
## [316] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G46090" "AT3G46900" "AT3G47070" "AT3G47420"
## [323] "AT3G47430" "AT3G48280" "AT3G48560" "AT3G48660" "AT3G48690" "AT3G49240" "AT3G49470"
## [330] "AT3G49570" "AT3G50685" "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52720" "AT3G52920"
## [337] "AT3G53700" "AT3G53830" "AT3G53920" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [344] "AT3G54720" "AT3G54900" "AT3G56080" "AT3G56160" "AT3G56290" "AT3G56300" "AT3G56330"
## [351] "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180" "AT3G57190" "AT3G57400" "AT3G58840"
## [358] "AT3G58990" "AT3G59220" "AT3G59250" "AT3G59400" "AT3G61220" "AT3G61780" "AT3G61880"
## [365] "AT3G63200" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [372] "AT4G01080" "AT4G01535" "AT4G02630" "AT4G02990" "AT4G03600" "AT4G04020" "AT4G04610"
## [379] "AT4G05110" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620" "AT4G11100"
## [386] "AT4G11175" "AT4G12390" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14440"
## [393] "AT4G14690" "AT4G15210" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550" "AT4G15810"
## [400] "AT4G16140" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16980" "AT4G17180" "AT4G17680"
## [407] "AT4G17880" "AT4G17970" "AT4G19170" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990"
## [414] "AT4G23680" "AT4G23770" "AT4G24540" "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780"
## [421] "AT4G26600" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27700" "AT4G28660" "AT4G28700"
## [428] "AT4G28730" "AT4G28740" "AT4G28780" "AT4G30470" "AT4G30610" "AT4G30960" "AT4G31210"
## [435] "AT4G31390" "AT4G31870" "AT4G32770" "AT4G33010" "AT4G33560" "AT4G34550" "AT4G34610"
## [442] "AT4G34630" "AT4G35090" "AT4G36580" "AT4G36950" "AT4G37650" "AT4G37800" "AT4G37925"
## [449] "AT4G38060" "AT4G38680" "AT4G38960" "AT4G38970" "AT4G39330" "AT4G39470" "AT4G39510"
## [456] "AT4G39800" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [463] "AT5G02180" "AT5G02230" "AT5G02540" "AT5G02830" "AT5G02950" "AT5G03555" "AT5G03760"
## [470] "AT5G05270" "AT5G05580" "AT5G06550" "AT5G06790" "AT5G08610" "AT5G08720" "AT5G08760"
## [477] "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470" "AT5G12080" "AT5G12110" "AT5G13400"
## [484] "AT5G13730" "AT5G13770" "AT5G13920" "AT5G14350" "AT5G14580" "AT5G14610" "AT5G14740"
## [491] "AT5G15600" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340" "AT5G16530"
## [498] "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300"
## [505] "AT5G19730" "AT5G19850" "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380"
## [512] "AT5G21100" "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23730" "AT5G23750" "AT5G23760"
## [519] "AT5G24105" "AT5G24120" "AT5G24150" "AT5G24165" "AT5G24280" "AT5G24380" "AT5G24580"
## [526] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25590" "AT5G25630"
## [533] "AT5G28500" "AT5G38420" "AT5G38430" "AT5G39710" "AT5G43400" "AT5G43630" "AT5G43850"
## [540] "AT5G44190" "AT5G44490" "AT5G45800" "AT5G46220" "AT5G46580" "AT5G47220" "AT5G47360"
## [547] "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48850" "AT5G48910" "AT5G49100" "AT5G49740"
## [554] "AT5G50100" "AT5G51540" "AT5G51720" "AT5G52570" "AT5G53170" "AT5G53200" "AT5G53970"
## [561] "AT5G54130" "AT5G54470" "AT5G54585" "AT5G54610" "AT5G54630" "AT5G55570" "AT5G55730"
## [568] "AT5G55740" "AT5G55790" "AT5G56850" "AT5G56860" "AT5G57030" "AT5G57180" "AT5G57240"
## [575] "AT5G58770" "AT5G58870" "AT5G59780" "AT5G61030" "AT5G61130" "AT5G61350" "AT5G61670"
## [582] "AT5G62130" "AT5G62140" "AT5G62370" "AT5G63530" "AT5G63630" "AT5G63700" "AT5G64170"
## [589] "AT5G64710" "AT5G64840" "AT5G64940" "AT5G65380" "AT5G65820" "AT5G66270" "AT5G66740"
## [596] "AT5G66960" "AT5G67030" "AT5G67370" "AT5G67385" "ATCG00330" "ATCG00905" "ATCG00920"
## [603] "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960" "ATCG00970" "ATCG01130" "ATCG01170"
## [610] "ATCG01190" "ATCG01300" "ATCG01310" "ATMG00030" "ATMG00050" "ATMG01130"
##
## $`A1-V1_up`
## [1] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" "AT1G62170" "AT1G62180" "AT1G64500" "AT2G21320"
## [9] "AT2G24762" "AT2G46830" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [17] "AT4G12390" "AT4G37650" "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280"
## [25] "AT5G47610" "AT5G48570" "AT5G54610" "AT5G58770" "AT5G62140"
##
## $`M6-A6_up`
## [1] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" "AT1G02610" "AT1G02620" "AT1G02820"
## [8] "AT1G03020" "AT1G03130" "AT1G03310" "AT1G03600" "AT1G03610" "AT1G03630" "AT1G04680"
## [15] "AT1G04770" "AT1G05540" "AT1G06040" "AT1G06460" "AT1G06680" "AT1G07050" "AT1G07280"
## [22] "AT1G07440" "AT1G08380" "AT1G08550" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G10020"
## [29] "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11130" "AT1G11180" "AT1G11260"
## [36] "AT1G11290" "AT1G11362" "AT1G11380" "AT1G11925" "AT1G12090" "AT1G12450" "AT1G12500"
## [43] "AT1G12710" "AT1G12730" "AT1G12900" "AT1G13245" "AT1G13650" "AT1G13700" "AT1G13930"
## [50] "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14700" "AT1G14720" "AT1G15040"
## [57] "AT1G15080" "AT1G15150" "AT1G15160" "AT1G15290" "AT1G15550" "AT1G15690" "AT1G15820"
## [64] "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16400" "AT1G16410"
## [71] "AT1G16720" "AT1G16730" "AT1G17100" "AT1G17850" "AT1G17970" "AT1G18000" "AT1G18010"
## [78] "AT1G18265" "AT1G18330" "AT1G18485" "AT1G19150" "AT1G19450" "AT1G19510" "AT1G19715"
## [85] "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20440" "AT1G21500" "AT1G21910"
## [92] "AT1G22190" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22480" "AT1G22490"
## [99] "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590" "AT1G22630" "AT1G22690"
## [106] "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23205" "AT1G23390" "AT1G23400" "AT1G23480"
## [113] "AT1G23740" "AT1G25400" "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26761" "AT1G26800"
## [120] "AT1G27480" "AT1G27950" "AT1G28010" "AT1G28330" "AT1G29090" "AT1G29280" "AT1G29430"
## [127] "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530" "AT1G29600" "AT1G29670"
## [134] "AT1G29680" "AT1G29715" "AT1G30520" "AT1G31173" "AT1G31330" "AT1G31920" "AT1G32060"
## [141] "AT1G32080" "AT1G33170" "AT1G33240" "AT1G33760" "AT1G35140" "AT1G35420" "AT1G36370"
## [148] "AT1G36675" "AT1G42550" "AT1G43670" "AT1G44000" "AT1G44446" "AT1G45010" "AT1G47370"
## [155] "AT1G47440" "AT1G47580" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49380" "AT1G49490"
## [162] "AT1G49650" "AT1G49975" "AT1G49990" "AT1G50040" "AT1G50290" "AT1G50590" "AT1G50732"
## [169] "AT1G51400" "AT1G51402" "AT1G51805" "AT1G51940" "AT1G52230" "AT1G52342" "AT1G52770"
## [176] "AT1G53160" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55480"
## [183] "AT1G56670" "AT1G56720" "AT1G57590" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690"
## [190] "AT1G60800" "AT1G61300" "AT1G61520" "AT1G61795" "AT1G62170" "AT1G62180" "AT1G62510"
## [197] "AT1G62560" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63570" "AT1G63930" "AT1G64355"
## [204] "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900" "AT1G65230" "AT1G65390" "AT1G65590"
## [211] "AT1G66130" "AT1G66230" "AT1G66840" "AT1G66930" "AT1G67265" "AT1G67590" "AT1G67740"
## [218] "AT1G67910" "AT1G68010" "AT1G68050" "AT1G68190" "AT1G68520" "AT1G68540" "AT1G68670"
## [225] "AT1G68830" "AT1G68890" "AT1G69140" "AT1G69890" "AT1G70090" "AT1G70290" "AT1G70580"
## [232] "AT1G70820" "AT1G71000" "AT1G71030" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72270"
## [239] "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72600" "AT1G72610" "AT1G72630" "AT1G72640"
## [246] "AT1G72645" "AT1G73325" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870"
## [253] "AT1G73890" "AT1G74070" "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75250" "AT1G75460"
## [260] "AT1G75690" "AT1G75770" "AT1G75900" "AT1G75960" "AT1G76080" "AT1G76100" "AT1G76110"
## [267] "AT1G76690" "AT1G76955" "AT1G77090" "AT1G77210" "AT1G77630" "AT1G77640" "AT1G78000"
## [274] "AT1G78100" "AT1G78450" "AT1G78600" "AT1G78990" "AT1G78995" "AT1G79330" "AT1G79770"
## [281] "AT1G79780" "AT1G80440" "AT1G80630" "AT1G80920" "AT2G01590" "AT2G01755" "AT2G01760"
## [288] "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02710" "AT2G02950"
## [295] "AT2G02990" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03710" "AT2G04790"
## [302] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05995" "AT2G06520" "AT2G13360"
## [309] "AT2G15020" "AT2G15090" "AT2G15890" "AT2G15970" "AT2G16365" "AT2G16630" "AT2G16660"
## [316] "AT2G17230" "AT2G17695" "AT2G17780" "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18560"
## [323] "AT2G18700" "AT2G18940" "AT2G19310" "AT2G20250" "AT2G20670" "AT2G20680" "AT2G21130"
## [330] "AT2G21140" "AT2G21320" "AT2G21330" "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22810"
## [337] "AT2G22830" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600"
## [344] "AT2G23840" "AT2G24110" "AT2G24550" "AT2G24580" "AT2G24610" "AT2G25130" "AT2G25200"
## [351] "AT2G25270" "AT2G25450" "AT2G25900" "AT2G26080" "AT2G26710" "AT2G26870" "AT2G26975"
## [358] "AT2G27420" "AT2G28120" "AT2G28305" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29170"
## [365] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29450"
## [372] "AT2G29630" "AT2G29650" "AT2G29670" "AT2G30150" "AT2G30390" "AT2G30420" "AT2G30600"
## [379] "AT2G30615" "AT2G30930" "AT2G31360" "AT2G31790" "AT2G32100" "AT2G32179" "AT2G32180"
## [386] "AT2G32290" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32640"
## [393] "AT2G33060" "AT2G33255" "AT2G33330" "AT2G33735" "AT2G33855" "AT2G34410" "AT2G34420"
## [400] "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34760" "AT2G35130" "AT2G35260" "AT2G35660"
## [407] "AT2G35760" "AT2G35960" "AT2G36050" "AT2G36830" "AT2G36990" "AT2G37220" "AT2G37450"
## [414] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37790" "AT2G37950" "AT2G38210" "AT2G38230"
## [421] "AT2G38460" "AT2G38530" "AT2G38540" "AT2G38820" "AT2G39730" "AT2G39880" "AT2G39920"
## [428] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40150" "AT2G40330" "AT2G40540" "AT2G40840"
## [435] "AT2G40960" "AT2G41050" "AT2G41430" "AT2G41480" "AT2G41990" "AT2G42320" "AT2G42380"
## [442] "AT2G42485" "AT2G43010" "AT2G43100" "AT2G43120" "AT2G43550" "AT2G45180" "AT2G45560"
## [449] "AT2G45850" "AT2G46790" "AT2G47440" "AT2G47485" "AT2G47920" "AT3G01060" "AT3G01440"
## [456] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02730" "AT3G03190" "AT3G03480" "AT3G03780"
## [463] "AT3G04445" "AT3G04550" "AT3G04960" "AT3G05625" "AT3G05936" "AT3G06070" "AT3G06145"
## [470] "AT3G06160" "AT3G06520" "AT3G07310" "AT3G07350" "AT3G07500" "AT3G08000" "AT3G08920"
## [477] "AT3G08940" "AT3G09050" "AT3G09160" "AT3G09162" "AT3G09580" "AT3G10020" "AT3G10520"
## [484] "AT3G11110" "AT3G11700" "AT3G12110" "AT3G12520" "AT3G12685" "AT3G13470" "AT3G13750"
## [491] "AT3G14200" "AT3G14415" "AT3G14850" "AT3G15354" "AT3G15450" "AT3G15500" "AT3G15570"
## [498] "AT3G15720" "AT3G15850" "AT3G16175" "AT3G16250" "AT3G16350" "AT3G17170" "AT3G17350"
## [505] "AT3G17470" "AT3G17640" "AT3G17930" "AT3G18080" "AT3G18710" "AT3G18750" "AT3G18773"
## [512] "AT3G19000" "AT3G19002" "AT3G19480" "AT3G19680" "AT3G19690" "AT3G19700" "AT3G19930"
## [519] "AT3G20350" "AT3G20470" "AT3G20480" "AT3G20640" "AT3G20680" "AT3G20820" "AT3G21352"
## [526] "AT3G21460" "AT3G21755" "AT3G21760" "AT3G21870" "AT3G22150" "AT3G22420" "AT3G22760"
## [533] "AT3G23080" "AT3G23450" "AT3G23810" "AT3G23880" "AT3G24030" "AT3G24430" "AT3G24460"
## [540] "AT3G25410" "AT3G25717" "AT3G25760" "AT3G26280" "AT3G26290" "AT3G26320" "AT3G26490"
## [547] "AT3G26510" "AT3G26570" "AT3G26740" "AT3G27690" "AT3G28070" "AT3G28200" "AT3G28420"
## [554] "AT3G29035" "AT3G29185" "AT3G29320" "AT3G44020" "AT3G44990" "AT3G45230" "AT3G45430"
## [561] "AT3G45780" "AT3G45970" "AT3G46130" "AT3G46370" "AT3G46580" "AT3G46630" "AT3G46640"
## [568] "AT3G46970" "AT3G47070" "AT3G47430" "AT3G47470" "AT3G47500" "AT3G47750" "AT3G48200"
## [575] "AT3G48280" "AT3G48350" "AT3G48420" "AT3G48460" "AT3G48720" "AT3G49470" "AT3G49570"
## [582] "AT3G49580" "AT3G49790" "AT3G49930" "AT3G50060" "AT3G50120" "AT3G50685" "AT3G50840"
## [589] "AT3G51080" "AT3G51400" "AT3G51420" "AT3G51510" "AT3G51600" "AT3G52070" "AT3G52072"
## [596] "AT3G52840" "AT3G53420" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54050" "AT3G54060"
## [603] "AT3G54500" "AT3G54600" "AT3G54830" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630"
## [610] "AT3G55646" "AT3G55760" "AT3G55800" "AT3G56000" "AT3G56160" "AT3G56290" "AT3G56360"
## [617] "AT3G57020" "AT3G57190" "AT3G57765" "AT3G58200" "AT3G58620" "AT3G58990" "AT3G59060"
## [624] "AT3G59120" "AT3G59250" "AT3G59710" "AT3G59940" "AT3G60290" "AT3G60390" "AT3G61060"
## [631] "AT3G61220" "AT3G61870" "AT3G61900" "AT3G62410" "AT3G62550" "AT3G62630" "AT3G62750"
## [638] "AT3G62860" "AT3G62950" "AT3G63160" "AT4G00165" "AT4G00360" "AT4G00370" "AT4G01130"
## [645] "AT4G01330" "AT4G01670" "AT4G01985" "AT4G02630" "AT4G02770" "AT4G03400" "AT4G03510"
## [652] "AT4G04330" "AT4G04340" "AT4G04610" "AT4G04745" "AT4G04810" "AT4G04830" "AT4G04840"
## [659] "AT4G05070" "AT4G06534" "AT4G06536" "AT4G07400" "AT4G09350" "AT4G09650" "AT4G09670"
## [666] "AT4G09760" "AT4G10120" "AT4G10290" "AT4G10340" "AT4G11360" "AT4G11521" "AT4G12310"
## [673] "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12420" "AT4G12730" "AT4G12830" "AT4G12900"
## [680] "AT4G12917" "AT4G12980" "AT4G13340" "AT4G13810" "AT4G13830" "AT4G14270" "AT4G14358"
## [687] "AT4G14540" "AT4G14740" "AT4G15210" "AT4G15450" "AT4G15630" "AT4G15670" "AT4G16563"
## [694] "AT4G16740" "AT4G16980" "AT4G17090" "AT4G17340" "AT4G17360" "AT4G17460" "AT4G17810"
## [701] "AT4G18210" "AT4G18240" "AT4G18980" "AT4G19170" "AT4G19420" "AT4G19530" "AT4G20140"
## [708] "AT4G20260" "AT4G20820" "AT4G20840" "AT4G20860" "AT4G21280" "AT4G21445" "AT4G21870"
## [715] "AT4G21880" "AT4G21990" "AT4G23890" "AT4G24090" "AT4G24130" "AT4G24230" "AT4G24350"
## [722] "AT4G24660" "AT4G24670" "AT4G24700" "AT4G24810" "AT4G25050" "AT4G25080" "AT4G25470"
## [729] "AT4G25480" "AT4G25780" "AT4G25810" "AT4G26150" "AT4G26370" "AT4G26520" "AT4G26530"
## [736] "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27450" "AT4G27700" "AT4G27720" "AT4G27730"
## [743] "AT4G27820" "AT4G28703" "AT4G28740" "AT4G29190" "AT4G29905" "AT4G30250" "AT4G31850"
## [750] "AT4G32340" "AT4G32350" "AT4G32480" "AT4G32770" "AT4G32800" "AT4G32980" "AT4G33000"
## [757] "AT4G33010" "AT4G33220" "AT4G33467" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34090"
## [764] "AT4G34220" "AT4G34250" "AT4G34730" "AT4G34900" "AT4G34950" "AT4G35090" "AT4G35320"
## [771] "AT4G36040" "AT4G36410" "AT4G36530" "AT4G36670" "AT4G37240" "AT4G37260" "AT4G37450"
## [778] "AT4G37610" "AT4G37800" "AT4G37925" "AT4G38400" "AT4G38430" "AT4G38470" "AT4G38770"
## [785] "AT4G38840" "AT4G39330" "AT4G39710" "AT4G39770" "AT5G01015" "AT5G01410" "AT5G01520"
## [792] "AT5G02010" "AT5G02120" "AT5G02160" "AT5G02180" "AT5G02810" "AT5G02830" "AT5G02950"
## [799] "AT5G03285" "AT5G04190" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05740" "AT5G05890"
## [806] "AT5G06220" "AT5G06690" "AT5G06790" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [813] "AT5G08720" "AT5G09440" "AT5G09660" "AT5G09820" "AT5G10150" "AT5G10470" "AT5G10690"
## [820] "AT5G11070" "AT5G11160" "AT5G11410" "AT5G11580" "AT5G11610" "AT5G12050" "AT5G12080"
## [827] "AT5G12110" "AT5G12420" "AT5G12950" "AT5G13630" "AT5G13730" "AT5G14200" "AT5G14360"
## [834] "AT5G14740" "AT5G15350" "AT5G16370" "AT5G16400" "AT5G16810" "AT5G17670" "AT5G18030"
## [841] "AT5G18080" "AT5G18570" "AT5G18670" "AT5G19100" "AT5G19120" "AT5G19140" "AT5G19190"
## [848] "AT5G19730" "AT5G19940" "AT5G20225" "AT5G20250" "AT5G20670" "AT5G20740" "AT5G20935"
## [855] "AT5G21100" "AT5G21222" "AT5G21430" "AT5G21930" "AT5G21940" "AT5G22640" "AT5G22920"
## [862] "AT5G23010" "AT5G23060" "AT5G23210" "AT5G23360" "AT5G23870" "AT5G23920" "AT5G23980"
## [869] "AT5G24000" "AT5G24030" "AT5G24120" "AT5G24150" "AT5G24155" "AT5G24160" "AT5G24460"
## [876] "AT5G24470" "AT5G24490" "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140"
## [883] "AT5G25190" "AT5G25210" "AT5G25240" "AT5G25610" "AT5G25630" "AT5G26220" "AT5G26230"
## [890] "AT5G26820" "AT5G27290" "AT5G27350" "AT5G27390" "AT5G28020" "AT5G28030" "AT5G28500"
## [897] "AT5G28610" "AT5G28640" "AT5G28770" "AT5G35170" "AT5G35790" "AT5G36002" "AT5G38290"
## [904] "AT5G38410" "AT5G38510" "AT5G38520" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860"
## [911] "AT5G40380" "AT5G40890" "AT5G41050" "AT5G41080" "AT5G41590" "AT5G41761" "AT5G41800"
## [918] "AT5G41900" "AT5G42070" "AT5G42200" "AT5G42450" "AT5G43270" "AT5G43750" "AT5G43870"
## [925] "AT5G44005" "AT5G44020" "AT5G44130" "AT5G44190" "AT5G44260" "AT5G44410" "AT5G44600"
## [932] "AT5G45650" "AT5G45680" "AT5G45820" "AT5G45830" "AT5G46220" "AT5G46580" "AT5G46600"
## [939] "AT5G47240" "AT5G47330" "AT5G47370" "AT5G47440" "AT5G47900" "AT5G48545" "AT5G48850"
## [946] "AT5G48910" "AT5G49390" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49740" "AT5G50450"
## [953] "AT5G50950" "AT5G51390" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G51950" "AT5G51970"
## [960] "AT5G52100" "AT5G52120" "AT5G52310" "AT5G52970" "AT5G54145" "AT5G54148" "AT5G54170"
## [967] "AT5G54270" "AT5G54300" "AT5G54585" "AT5G54980" "AT5G55180" "AT5G55740" "AT5G56100"
## [974] "AT5G56544" "AT5G56550" "AT5G56850" "AT5G57100" "AT5G57170" "AT5G57340" "AT5G57550"
## [981] "AT5G57560" "AT5G57630" "AT5G57660" "AT5G57800" "AT5G57880" "AT5G57887" "AT5G58260"
## [988] "AT5G58310" "AT5G58770" "AT5G58900" "AT5G59130" "AT5G59310" "AT5G59730" "AT5G59750"
## [995] "AT5G60400" "AT5G60680" "AT5G61350" "AT5G61590" "AT5G61890" "AT5G62140"
## [ reached getOption("max.print") -- omitted 30 entries ]
##
## $`M6-V6_up`
## [1] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" "AT1G03130" "AT1G03600" "AT1G03630"
## [8] "AT1G03680" "AT1G04250" "AT1G04770" "AT1G05675" "AT1G06040" "AT1G06460" "AT1G06680"
## [15] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G08380" "AT1G09310" "AT1G09340" "AT1G09350"
## [22] "AT1G10020" "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G12090" "AT1G12710"
## [29] "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13245" "AT1G13260" "AT1G13650" "AT1G13930"
## [36] "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700" "AT1G15810"
## [43] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G17147" "AT1G17970"
## [50] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [57] "AT1G19150" "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20340" "AT1G21130" "AT1G21500"
## [64] "AT1G21550" "AT1G21910" "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770"
## [71] "AT1G23390" "AT1G23740" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26800"
## [78] "AT1G27330" "AT1G27480" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510"
## [85] "AT1G29670" "AT1G29910" "AT1G29920" "AT1G30380" "AT1G31330" "AT1G31690" "AT1G32060"
## [92] "AT1G32080" "AT1G32220" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G35140" "AT1G36370"
## [99] "AT1G43310" "AT1G43670" "AT1G44446" "AT1G44575" "AT1G49200" "AT1G50590" "AT1G51080"
## [106] "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51805" "AT1G52200" "AT1G52220"
## [113] "AT1G52230" "AT1G52342" "AT1G52510" "AT1G53163" "AT1G54410" "AT1G54780" "AT1G54790"
## [120] "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55670" "AT1G56300" "AT1G56340"
## [127] "AT1G57590" "AT1G57990" "AT1G59860" "AT1G60800" "AT1G61190" "AT1G61300" "AT1G61520"
## [134] "AT1G62520" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G66130" "AT1G66230"
## [141] "AT1G66910" "AT1G66930" "AT1G67340" "AT1G67590" "AT1G67740" "AT1G67910" "AT1G68050"
## [148] "AT1G68840" "AT1G69140" "AT1G69570" "AT1G69572" "AT1G69830" "AT1G69890" "AT1G70090"
## [155] "AT1G70420" "AT1G70580" "AT1G70820" "AT1G71000" "AT1G71030" "AT1G71970" "AT1G72416"
## [162] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645" "AT1G73470" "AT1G73480"
## [169] "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74730" "AT1G74940"
## [176] "AT1G75280" "AT1G75690" "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76690"
## [183] "AT1G77210" "AT1G78000" "AT1G78600" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79330"
## [190] "AT1G80440" "AT1G80920" "AT2G01008" "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755"
## [197] "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02450" "AT2G03310" "AT2G03410"
## [204] "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04790" "AT2G04795" "AT2G05070"
## [211] "AT2G05100" "AT2G05160" "AT2G06520" "AT2G13360" "AT2G15090" "AT2G15890" "AT2G15970"
## [218] "AT2G16270" "AT2G16365" "AT2G17230" "AT2G17880" "AT2G18160" "AT2G18162" "AT2G18300"
## [225] "AT2G18350" "AT2G18560" "AT2G18700" "AT2G19310" "AT2G21130" "AT2G21320" "AT2G21330"
## [232] "AT2G21970" "AT2G22810" "AT2G22830" "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240"
## [239] "AT2G24550" "AT2G24580" "AT2G24645" "AT2G25200" "AT2G25735" "AT2G25900" "AT2G26150"
## [246] "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27385" "AT2G27420" "AT2G28120" "AT2G28605"
## [253] "AT2G28900" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29360" "AT2G29630"
## [260] "AT2G29650" "AT2G30150" "AT2G30420" "AT2G30570" "AT2G30615" "AT2G31040" "AT2G31945"
## [267] "AT2G32100" "AT2G32500" "AT2G32640" "AT2G33830" "AT2G34410" "AT2G34420" "AT2G34430"
## [274] "AT2G34620" "AT2G35660" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G37530" "AT2G37540"
## [281] "AT2G37585" "AT2G37950" "AT2G38480" "AT2G39400" "AT2G39730" "AT2G39900" "AT2G39980"
## [288] "AT2G40000" "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40330" "AT2G40340" "AT2G40550"
## [295] "AT2G40610" "AT2G40840" "AT2G40960" "AT2G41430" "AT2G42485" "AT2G42530" "AT2G42540"
## [302] "AT2G43010" "AT2G43120" "AT2G44130" "AT2G44490" "AT2G45180" "AT2G45560" "AT2G45850"
## [309] "AT2G46240" "AT2G46790" "AT2G46820" "AT2G46830" "AT2G47920" "AT3G01060" "AT3G01440"
## [316] "AT3G01500" "AT3G01810" "AT3G02550" "AT3G02730" "AT3G04210" "AT3G04300" "AT3G04380"
## [323] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G07200" "AT3G07310" "AT3G07320" "AT3G07350"
## [330] "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440" "AT3G09580" "AT3G10020"
## [337] "AT3G10060" "AT3G10520" "AT3G10720" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G13437"
## [344] "AT3G13470" "AT3G14200" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G16130" "AT3G16250"
## [351] "AT3G17390" "AT3G17640" "AT3G17840" "AT3G18050" "AT3G18080" "AT3G18500" "AT3G18710"
## [358] "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19615" "AT3G19680" "AT3G19690"
## [365] "AT3G21055" "AT3G21780" "AT3G21950" "AT3G22210" "AT3G23880" "AT3G24430" "AT3G24515"
## [372] "AT3G25670" "AT3G26180" "AT3G26290" "AT3G26510" "AT3G26740" "AT3G27690" "AT3G29320"
## [379] "AT3G29330" "AT3G45970" "AT3G46370" "AT3G46630" "AT3G46640" "AT3G46780" "AT3G46970"
## [386] "AT3G47070" "AT3G47460" "AT3G47470" "AT3G47500" "AT3G48200" "AT3G48280" "AT3G48420"
## [393] "AT3G48720" "AT3G49570" "AT3G49580" "AT3G49790" "AT3G50060" "AT3G50820" "AT3G50840"
## [400] "AT3G50920" "AT3G50960" "AT3G51080" "AT3G51400" "AT3G51470" "AT3G51750" "AT3G52070"
## [407] "AT3G52072" "AT3G52180" "AT3G52960" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54490"
## [414] "AT3G54500" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [421] "AT3G56160" "AT3G56290" "AT3G56940" "AT3G57740" "AT3G59060" "AT3G59870" "AT3G59900"
## [428] "AT3G59940" "AT3G60390" "AT3G61060" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870"
## [435] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63140" "AT3G63160" "AT4G00165" "AT4G00970"
## [442] "AT4G01330" "AT4G01670" "AT4G02075" "AT4G02770" "AT4G03400" "AT4G03510" "AT4G04020"
## [449] "AT4G04330" "AT4G04340" "AT4G04810" "AT4G04830" "AT4G05070" "AT4G05180" "AT4G06534"
## [456] "AT4G08950" "AT4G09010" "AT4G09650" "AT4G09750" "AT4G09760" "AT4G10120" "AT4G10340"
## [463] "AT4G11300" "AT4G11360" "AT4G11521" "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12800"
## [470] "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810" "AT4G14270"
## [477] "AT4G14560" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15975" "AT4G16146"
## [484] "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17810" "AT4G18205"
## [491] "AT4G18220" "AT4G19170" "AT4G19530" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445"
## [498] "AT4G21870" "AT4G21990" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23180" "AT4G23800"
## [505] "AT4G23810" "AT4G24240" "AT4G25290" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26520"
## [512] "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27700" "AT4G28240" "AT4G28270"
## [519] "AT4G28703" "AT4G28750" "AT4G29190" "AT4G30650" "AT4G30662" "AT4G32280" "AT4G32340"
## [526] "AT4G32590" "AT4G32980" "AT4G33010" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980"
## [533] "AT4G34220" "AT4G34250" "AT4G34630" "AT4G34900" "AT4G35655" "AT4G36040" "AT4G36530"
## [540] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37925" "AT4G38550" "AT4G38552"
## [547] "AT4G38770" "AT4G39260" "AT4G39580" "AT4G39710" "AT4G39730" "AT5G01015" "AT5G01520"
## [554] "AT5G01530" "AT5G02160" "AT5G02180" "AT5G02760" "AT5G02810" "AT5G02890" "AT5G03285"
## [561] "AT5G03360" "AT5G05090" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05890" "AT5G06220"
## [568] "AT5G06230" "AT5G06290" "AT5G06690" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [575] "AT5G09660" "AT5G10250" "AT5G10340" "AT5G10690" "AT5G11070" "AT5G11242" "AT5G12110"
## [582] "AT5G12950" "AT5G13630" "AT5G13730" "AT5G16350" "AT5G16370" "AT5G16400" "AT5G16810"
## [589] "AT5G18030" "AT5G18080" "AT5G18660" "AT5G19120" "AT5G19190" "AT5G19940" "AT5G20250"
## [596] "AT5G21430" "AT5G21940" "AT5G22920" "AT5G23210" "AT5G23235" "AT5G23240" "AT5G23360"
## [603] "AT5G24120" "AT5G24155" "AT5G24300" "AT5G24460" "AT5G24470" "AT5G24660" "AT5G24890"
## [610] "AT5G25130" "AT5G25240" "AT5G25280" "AT5G26220" "AT5G26230" "AT5G27290" "AT5G28610"
## [617] "AT5G28630" "AT5G28910" "AT5G35480" "AT5G35970" "AT5G38410" "AT5G38510" "AT5G38980"
## [624] "AT5G38990" "AT5G39020" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860" "AT5G40500"
## [631] "AT5G41050" "AT5G41761" "AT5G42200" "AT5G43440" "AT5G43750" "AT5G44005" "AT5G44060"
## [638] "AT5G44070" "AT5G44260" "AT5G44410" "AT5G44680" "AT5G45670" "AT5G45680" "AT5G45820"
## [645] "AT5G45830" "AT5G46110" "AT5G46220" "AT5G46600" "AT5G47370" "AT5G48545" "AT5G48570"
## [652] "AT5G48850" "AT5G48880" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49900" "AT5G50450"
## [659] "AT5G50740" "AT5G51460" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G52100" "AT5G54145"
## [666] "AT5G54148" "AT5G54270" "AT5G54280" "AT5G54585" "AT5G54770" "AT5G55740" "AT5G56010"
## [673] "AT5G56100" "AT5G56544" "AT5G56550" "AT5G57170" "AT5G57560" "AT5G57660" "AT5G58310"
## [680] "AT5G59130" "AT5G60100" "AT5G60270" "AT5G60400" "AT5G60680" "AT5G61160" "AT5G61270"
## [687] "AT5G61350" "AT5G61440" "AT5G61590" "AT5G61600" "AT5G62140" "AT5G62280" "AT5G62430"
## [694] "AT5G62720" "AT5G62730" "AT5G63140" "AT5G63380" "AT5G63700" "AT5G63780" "AT5G63820"
## [701] "AT5G64040" "AT5G64170" "AT5G64190" "AT5G65207" "AT5G66520" "AT5G66570" "AT5G66580"
## [708] "AT5G67370" "AT5G67420" "ATCG00010" "ATCG00020" "ATCG00140" "ATCG00270" "ATCG00280"
## [715] "ATCG00330" "ATCG00340" "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00680" "ATCG00710"
## [722] "ATCG00720" "ATCG00730" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960"
## [729] "ATCG00970" "ATCG01060" "ATCG01160" "ATCG01170" "ATCG01180" "ATCG01190" "ATCG01200"
## [736] "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00030"
##
## $`A6-V6_up`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04490" "AT1G05010"
## [15] "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148" "AT1G06360" "AT1G08050"
## [22] "AT1G08860" "AT1G10230" "AT1G11310" "AT1G11330" "AT1G11905" "AT1G12210" "AT1G13110"
## [29] "AT1G13310" "AT1G13550" "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G17147"
## [36] "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19960" "AT1G21250"
## [43] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400" "AT1G22770" "AT1G23200" "AT1G25370"
## [50] "AT1G27100" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420" "AT1G31280" "AT1G31290"
## [57] "AT1G31690" "AT1G32920" "AT1G32940" "AT1G32960" "AT1G33800" "AT1G35210" "AT1G35230"
## [64] "AT1G43310" "AT1G43910" "AT1G44900" "AT1G51660" "AT1G52200" "AT1G53620" "AT1G53625"
## [71] "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990" "AT1G59865"
## [78] "AT1G61140" "AT1G61370" "AT1G63750" "AT1G63820" "AT1G64710" "AT1G66550" "AT1G66600"
## [85] "AT1G67635" "AT1G67800" "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G70420"
## [92] "AT1G70690" "AT1G71100" "AT1G72930" "AT1G73805" "AT1G74710" "AT1G75830" "AT1G76970"
## [99] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G02930" "AT2G04040" "AT2G04070" "AT2G04430"
## [106] "AT2G04450" "AT2G05070" "AT2G07687" "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480"
## [113] "AT2G16440" "AT2G18660" "AT2G20110" "AT2G21510" "AT2G21790" "AT2G23810" "AT2G24160"
## [120] "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25737" "AT2G26150" "AT2G26240" "AT2G26440"
## [127] "AT2G26560" "AT2G28210" "AT2G28570" "AT2G28890" "AT2G29720" "AT2G31018" "AT2G31020"
## [134] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34500" "AT2G36470" "AT2G37560" "AT2G37940"
## [141] "AT2G37980" "AT2G38790" "AT2G39110" "AT2G40340" "AT2G40550" "AT2G41380" "AT2G41835"
## [148] "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130" "AT2G47140"
## [155] "AT2G47730" "AT3G01290" "AT3G02840" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G07195"
## [162] "AT3G07720" "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11840" "AT3G13080"
## [169] "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G15356" "AT3G16510" "AT3G19010"
## [176] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21780" "AT3G22370" "AT3G22910" "AT3G23530"
## [183] "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600" "AT3G26830" "AT3G28580"
## [190] "AT3G28930" "AT3G29240" "AT3G29400" "AT3G41768" "AT3G44350" "AT3G44830" "AT3G45260"
## [197] "AT3G46520" "AT3G46940" "AT3G47540" "AT3G47820" "AT3G48090" "AT3G48640" "AT3G48850"
## [204] "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150" "AT3G55470"
## [211] "AT3G55500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57700" "AT3G60190" "AT3G60420"
## [218] "AT3G60450" "AT3G60966" "AT3G61760" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895"
## [225] "AT4G01950" "AT4G02380" "AT4G02420" "AT4G02550" "AT4G05030" "AT4G09300" "AT4G09570"
## [232] "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G13180" "AT4G14220" "AT4G14368"
## [239] "AT4G14610" "AT4G15070" "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660"
## [246] "AT4G21380" "AT4G21840" "AT4G21903" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010"
## [253] "AT4G23170" "AT4G23180" "AT4G23250" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25900"
## [260] "AT4G27745" "AT4G28390" "AT4G29440" "AT4G30280" "AT4G30640" "AT4G33925" "AT4G33930"
## [267] "AT4G34135" "AT4G34390" "AT4G35180" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370"
## [274] "AT4G37390" "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640"
## [281] "AT5G01980" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650" "AT5G08335"
## [288] "AT5G08790" "AT5G10390" "AT5G10440" "AT5G12930" "AT5G12940" "AT5G13190" "AT5G14760"
## [295] "AT5G17380" "AT5G17780" "AT5G18470" "AT5G20400" "AT5G20960" "AT5G22060" "AT5G22300"
## [302] "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205" "AT5G24206" "AT5G24910" "AT5G25250"
## [309] "AT5G25930" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990" "AT5G39020" "AT5G39040"
## [316] "AT5G39680" "AT5G41180" "AT5G41730" "AT5G41880" "AT5G42380" "AT5G42440" "AT5G43910"
## [323] "AT5G44070" "AT5G44635" "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830"
## [330] "AT5G52020" "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52910" "AT5G54470"
## [337] "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860" "AT5G55450" "AT5G56960"
## [344] "AT5G59720" "AT5G60280" "AT5G60900" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62770"
## [351] "AT5G64170" "AT5G64810" "AT5G64870" "AT5G66640" "AT5G66890" "AT5G67340" "ATCG00020"
## [358] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [365] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [372] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [379] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [386] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $`M12-A12_up`
## [1] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01430" "AT1G01590" "AT1G01610"
## [8] "AT1G01620" "AT1G02640" "AT1G02650" "AT1G02700" "AT1G02710" "AT1G03300" "AT1G03600"
## [15] "AT1G03630" "AT1G03680" "AT1G03870" "AT1G04040" "AT1G04160" "AT1G04360" "AT1G04420"
## [22] "AT1G05310" "AT1G05420" "AT1G06160" "AT1G06240" "AT1G06250" "AT1G06260" "AT1G06265"
## [29] "AT1G06460" "AT1G06680" "AT1G06850" "AT1G07110" "AT1G07320" "AT1G07440" "AT1G07485"
## [36] "AT1G07490" "AT1G07880" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08810" "AT1G09340"
## [43] "AT1G09440" "AT1G09750" "AT1G10380" "AT1G10657" "AT1G10910" "AT1G10960" "AT1G11000"
## [50] "AT1G11130" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11860" "AT1G11925" "AT1G12060"
## [57] "AT1G12090" "AT1G12250" "AT1G12500" "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150"
## [64] "AT1G13250" "AT1G13380" "AT1G13650" "AT1G13790" "AT1G14030" "AT1G14150" "AT1G14160"
## [71] "AT1G14180" "AT1G14185" "AT1G14270" "AT1G14345" "AT1G14440" "AT1G14687" "AT1G14700"
## [78] "AT1G14720" "AT1G14900" "AT1G15000" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180"
## [85] "AT1G15260" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15690" "AT1G15820" "AT1G15980"
## [92] "AT1G15990" "AT1G16080" "AT1G16410" "AT1G16720" "AT1G17100" "AT1G17200" "AT1G17650"
## [99] "AT1G17850" "AT1G18000" "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18620"
## [106] "AT1G18650" "AT1G18735" "AT1G19150" "AT1G19220" "AT1G19350" "AT1G19450" "AT1G20010"
## [113] "AT1G20020" "AT1G20190" "AT1G20340" "AT1G20470" "AT1G20823" "AT1G21100" "AT1G21500"
## [120] "AT1G21680" "AT1G21880" "AT1G21910" "AT1G22330" "AT1G22370" "AT1G22550" "AT1G22590"
## [127] "AT1G22850" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205" "AT1G23340" "AT1G23470"
## [134] "AT1G23480" "AT1G23530" "AT1G23740" "AT1G23935" "AT1G23940" "AT1G24577" "AT1G25240"
## [141] "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26250" "AT1G26761" "AT1G26810" "AT1G27020"
## [148] "AT1G27210" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G29090" "AT1G29430"
## [155] "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29660"
## [162] "AT1G29670" "AT1G29680" "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980"
## [169] "AT1G30020" "AT1G30360" "AT1G30380" "AT1G30520" "AT1G30760" "AT1G30840" "AT1G31173"
## [176] "AT1G31330" "AT1G31710" "AT1G31835" "AT1G31950" "AT1G32060" "AT1G32080" "AT1G32200"
## [183] "AT1G32220" "AT1G32470" "AT1G32540" "AT1G32550" "AT1G32760" "AT1G32860" "AT1G32990"
## [190] "AT1G33240" "AT1G33440" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G35140" "AT1G35420"
## [197] "AT1G35680" "AT1G36675" "AT1G42970" "AT1G44575" "AT1G45163" "AT1G45165" "AT1G45545"
## [204] "AT1G46480" "AT1G47440" "AT1G47670" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49230"
## [211] "AT1G49320" "AT1G49380" "AT1G49650" "AT1G49730" "AT1G50450" "AT1G50732" "AT1G50900"
## [218] "AT1G50910" "AT1G51080" "AT1G51110" "AT1G51940" "AT1G52000" "AT1G52190" "AT1G52230"
## [225] "AT1G52240" "AT1G53230" "AT1G53233" "AT1G53250" "AT1G53300" "AT1G53700" "AT1G54730"
## [232] "AT1G54740" "AT1G54780" "AT1G54820" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490"
## [239] "AT1G55670" "AT1G56210" "AT1G56430" "AT1G56500" "AT1G56710" "AT1G56720" "AT1G57943"
## [246] "AT1G58150" "AT1G58370" "AT1G59840" "AT1G60000" "AT1G60160" "AT1G60390" "AT1G60550"
## [253] "AT1G60590" "AT1G60600" "AT1G60690" "AT1G60700" "AT1G60800" "AT1G60950" "AT1G61240"
## [260] "AT1G61520" "AT1G61550" "AT1G61795" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62750"
## [267] "AT1G62760" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63400" "AT1G63480" "AT1G64150"
## [274] "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64625" "AT1G64680" "AT1G64720" "AT1G64770"
## [281] "AT1G65230" "AT1G65590" "AT1G65860" "AT1G65900" "AT1G66100" "AT1G66130" "AT1G66140"
## [288] "AT1G66180" "AT1G66810" "AT1G66820" "AT1G67040" "AT1G67090" "AT1G67590" "AT1G67700"
## [295] "AT1G67740" "AT1G67750" "AT1G68010" "AT1G68190" "AT1G68238" "AT1G68400" "AT1G68520"
## [302] "AT1G68530" "AT1G68560" "AT1G68810" "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940"
## [309] "AT1G69140" "AT1G69530" "AT1G70280" "AT1G70370" "AT1G70410" "AT1G70430" "AT1G70460"
## [316] "AT1G70500" "AT1G70760" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71870" "AT1G72140"
## [323] "AT1G72270" "AT1G72310" "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72810"
## [330] "AT1G73066" "AT1G73110" "AT1G73325" "AT1G73590" "AT1G73830" "AT1G74070" "AT1G74370"
## [337] "AT1G74470" "AT1G74670" "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75250" "AT1G75360"
## [344] "AT1G75388" "AT1G75390" "AT1G75500" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [351] "AT1G75800" "AT1G76610" "AT1G77131" "AT1G77210" "AT1G77400" "AT1G77490" "AT1G77630"
## [358] "AT1G78020" "AT1G78060" "AT1G78320" "AT1G78450" "AT1G78460" "AT1G78820" "AT1G78830"
## [365] "AT1G78860" "AT1G78970" "AT1G78995" "AT1G79060" "AT1G79760" "AT1G79770" "AT1G80030"
## [372] "AT1G80080" "AT1G80520" "AT1G80530" "AT1G80630" "AT1G80640" "AT1G80690" "AT2G01420"
## [379] "AT2G01590" "AT2G01630" "AT2G01760" "AT2G01990" "AT2G02020" "AT2G02780" "AT2G02950"
## [386] "AT2G02980" "AT2G03090" "AT2G03420" "AT2G03750" "AT2G04380" "AT2G04780" "AT2G04790"
## [393] "AT2G05070" "AT2G05160" "AT2G05790" "AT2G05914" "AT2G05995" "AT2G06850" "AT2G10940"
## [400] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13820" "AT2G14800" "AT2G14880" "AT2G14890"
## [407] "AT2G15090" "AT2G15440" "AT2G15880" "AT2G16270" "AT2G16630" "AT2G17230" "AT2G17740"
## [414] "AT2G17780" "AT2G18300" "AT2G18560" "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170"
## [421] "AT2G19620" "AT2G19930" "AT2G20180" "AT2G20210" "AT2G20290" "AT2G20340" "AT2G20680"
## [428] "AT2G20890" "AT2G21050" "AT2G21080" "AT2G21140" "AT2G21330" "AT2G21660" "AT2G21830"
## [435] "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23590"
## [442] "AT2G23600" "AT2G24060" "AT2G24090" "AT2G24150" "AT2G24170" "AT2G24280" "AT2G24350"
## [449] "AT2G24580" "AT2G24610" "AT2G24762" "AT2G25270" "AT2G25470" "AT2G25790" "AT2G25840"
## [456] "AT2G25900" "AT2G26080" "AT2G26250" "AT2G26330" "AT2G26640" "AT2G26710" "AT2G26870"
## [463] "AT2G26900" "AT2G26910" "AT2G27040" "AT2G27060" "AT2G27130" "AT2G27190" "AT2G27385"
## [470] "AT2G27810" "AT2G28000" "AT2G28040" "AT2G28050" "AT2G28140" "AT2G28315" "AT2G28460"
## [477] "AT2G28790" "AT2G28810" "AT2G28870" "AT2G28930" "AT2G28950" "AT2G29050" "AT2G29290"
## [484] "AT2G29310" "AT2G29320" "AT2G29550" "AT2G29630" "AT2G30170" "AT2G30420" "AT2G30760"
## [491] "AT2G30766" "AT2G30790" "AT2G30820" "AT2G30830" "AT2G31170" "AT2G31790" "AT2G31902"
## [498] "AT2G32100" "AT2G32179" "AT2G32180" "AT2G32560" "AT2G32640" "AT2G33060" "AT2G33250"
## [505] "AT2G33330" "AT2G33570" "AT2G33735" "AT2G33860" "AT2G34060" "AT2G34170" "AT2G34180"
## [512] "AT2G34190" "AT2G34420" "AT2G34430" "AT2G34490" "AT2G34510" "AT2G34620" "AT2G34680"
## [519] "AT2G34930" "AT2G34980" "AT2G35130" "AT2G35190" "AT2G35260" "AT2G35500" "AT2G35590"
## [526] "AT2G35637" "AT2G35640" "AT2G35859" "AT2G35860" "AT2G35960" "AT2G36000" "AT2G36050"
## [533] "AT2G36110" "AT2G36200" "AT2G36570" "AT2G36815" "AT2G36830" "AT2G36990" "AT2G37090"
## [540] "AT2G37170" "AT2G37180" "AT2G37220" "AT2G37450" "AT2G37640" "AT2G37950" "AT2G38050"
## [547] "AT2G38080" "AT2G38120" "AT2G38170" "AT2G38210" "AT2G38460" "AT2G38530" "AT2G38540"
## [554] "AT2G39130" "AT2G39140" "AT2G39190" "AT2G39430" "AT2G39470" "AT2G39700" "AT2G39730"
## [561] "AT2G39870" "AT2G40008" "AT2G40480" "AT2G40540" "AT2G40610" "AT2G40690" "AT2G40815"
## [568] "AT2G41290" "AT2G41480" "AT2G41550" "AT2G41720" "AT2G41820" "AT2G41990" "AT2G42170"
## [575] "AT2G42290" "AT2G42300" "AT2G42320" "AT2G42380" "AT2G42870" "AT2G42940" "AT2G42980"
## [582] "AT2G43100" "AT2G43120" "AT2G43360" "AT2G43445" "AT2G44230" "AT2G44740" "AT2G44920"
## [589] "AT2G45050" "AT2G45180" "AT2G45340" "AT2G45470" "AT2G45560" "AT2G45850" "AT2G45870"
## [596] "AT2G45960" "AT2G46250" "AT2G46630" "AT2G46820" "AT2G47370" "AT2G47440" "AT2G47590"
## [603] "AT2G47840" "AT2G47930" "AT2G47940" "AT3G01060" "AT3G01440" "AT3G01480" "AT3G01490"
## [610] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02640" "AT3G02730" "AT3G03780" "AT3G03820"
## [617] "AT3G03980" "AT3G04140" "AT3G04160" "AT3G04550" "AT3G04960" "AT3G05190" "AT3G05620"
## [624] "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06145" "AT3G06160" "AT3G06433"
## [631] "AT3G06750" "AT3G06770" "AT3G07010" "AT3G07200" "AT3G07210" "AT3G07320" "AT3G07460"
## [638] "AT3G07540" "AT3G08030" "AT3G08600" "AT3G08920" "AT3G08940" "AT3G09035" "AT3G09160"
## [645] "AT3G09162" "AT3G09580" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10080" "AT3G10150"
## [652] "AT3G10160" "AT3G10200" "AT3G10340" "AT3G10840" "AT3G11110" "AT3G11700" "AT3G12110"
## [659] "AT3G12520" "AT3G12610" "AT3G12780" "AT3G13000" "AT3G13065" "AT3G13120" "AT3G13180"
## [666] "AT3G13240" "AT3G13470" "AT3G13510" "AT3G13750" "AT3G14210" "AT3G14240" "AT3G14310"
## [673] "AT3G14330" "AT3G14350" "AT3G14415" "AT3G14420" "AT3G15030" "AT3G15110" "AT3G15354"
## [680] "AT3G15530" "AT3G15570" "AT3G15680" "AT3G15720" "AT3G15800" "AT3G15850" "AT3G16180"
## [687] "AT3G16240" "AT3G16250" "AT3G16370" "AT3G16520" "AT3G16530" "AT3G16660" "AT3G16850"
## [694] "AT3G17350" "AT3G17640" "AT3G17830" "AT3G18050" "AT3G18080" "AT3G18090" "AT3G18110"
## [701] "AT3G18530" "AT3G18670" "AT3G18710" "AT3G18773" "AT3G18800" "AT3G18850" "AT3G18890"
## [708] "AT3G19002" "AT3G19120" "AT3G19480" "AT3G19710" "AT3G19850" "AT3G20015" "AT3G20260"
## [715] "AT3G20350" "AT3G20640" "AT3G20760" "AT3G20810" "AT3G20820" "AT3G21260" "AT3G21352"
## [722] "AT3G21460" "AT3G21870" "AT3G22120" "AT3G22121" "AT3G22142" "AT3G22150" "AT3G22790"
## [729] "AT3G22810" "AT3G23450" "AT3G23700" "AT3G23730" "AT3G23760" "AT3G23810" "AT3G23870"
## [736] "AT3G23880" "AT3G24255" "AT3G24400" "AT3G24430" "AT3G24480" "AT3G25130" "AT3G25410"
## [743] "AT3G25500" "AT3G25700" "AT3G25805" "AT3G25920" "AT3G26060" "AT3G26240" "AT3G26310"
## [750] "AT3G26320" "AT3G26445" "AT3G26510" "AT3G26520" "AT3G26570" "AT3G26650" "AT3G26932"
## [757] "AT3G27030" "AT3G27660" "AT3G27850" "AT3G27900" "AT3G28040" "AT3G28070" "AT3G28080"
## [764] "AT3G28130" "AT3G28200" "AT3G28860" "AT3G29185" "AT3G29320" "AT3G29670" "AT3G30720"
## [771] "AT3G42670" "AT3G43790" "AT3G44990" "AT3G45010" "AT3G45230" "AT3G45420" "AT3G45430"
## [778] "AT3G45940" "AT3G46130" "AT3G46370" "AT3G46550" "AT3G46580" "AT3G46780" "AT3G46900"
## [785] "AT3G46970" "AT3G47400" "AT3G48200" "AT3G48420" "AT3G48460" "AT3G48610" "AT3G48720"
## [792] "AT3G49260" "AT3G49290" "AT3G49670" "AT3G49740" "AT3G50120" "AT3G50220" "AT3G50240"
## [799] "AT3G50685" "AT3G50790" "AT3G50820" "AT3G50840" "AT3G50890" "AT3G51080" "AT3G51150"
## [806] "AT3G51420" "AT3G51470" "AT3G51480" "AT3G51510" "AT3G51820" "AT3G51910" "AT3G52150"
## [813] "AT3G52370" "AT3G52670" "AT3G52720" "AT3G52940" "AT3G52960" "AT3G53130" "AT3G53140"
## [820] "AT3G53190" "AT3G53420" "AT3G53460" "AT3G53800" "AT3G53950" "AT3G54050" "AT3G54400"
## [827] "AT3G54600" "AT3G54690" "AT3G54830" "AT3G54910" "AT3G54920" "AT3G55330" "AT3G55630"
## [834] "AT3G55800" "AT3G56160" "AT3G56370" "AT3G56650" "AT3G56940" "AT3G57180" "AT3G57830"
## [841] "AT3G58120" "AT3G58620" "AT3G58820" "AT3G59250" "AT3G59400" "AT3G59780" "AT3G59890"
## [848] "AT3G60070" "AT3G60320" "AT3G60370" "AT3G60530" "AT3G60630" "AT3G60750" "AT3G61160"
## [855] "AT3G61470" "AT3G61490" "AT3G61750" "AT3G61820" "AT3G61870" "AT3G61950" "AT3G62020"
## [862] "AT3G62070" "AT3G62550" "AT3G62690" "AT3G62750" "AT3G62910" "AT3G63110" "AT3G63140"
## [869] "AT3G63160" "AT3G63170" "AT3G63410" "AT3G63510" "AT4G00165" "AT4G00370" "AT4G00400"
## [876] "AT4G00950" "AT4G01130" "AT4G01310" "AT4G01330" "AT4G01440" "AT4G01460" "AT4G01670"
## [883] "AT4G02290" "AT4G02330" "AT4G02630" "AT4G02770" "AT4G03010" "AT4G03060" "AT4G03140"
## [890] "AT4G03190" "AT4G03210" "AT4G03280" "AT4G04330" "AT4G04340" "AT4G04350" "AT4G04450"
## [897] "AT4G04810" "AT4G07400" "AT4G07960" "AT4G09010" "AT4G09160" "AT4G09420" "AT4G09640"
## [904] "AT4G09650" "AT4G10120" "AT4G10340" "AT4G10800" "AT4G11290" "AT4G11450" "AT4G12030"
## [911] "AT4G12310" "AT4G12320" "AT4G12390" "AT4G12420" "AT4G12480" "AT4G12730" "AT4G12800"
## [918] "AT4G12830" "AT4G12900" "AT4G12917" "AT4G12970" "AT4G12980" "AT4G13260" "AT4G13340"
## [925] "AT4G13560" "AT4G13990" "AT4G14480" "AT4G14713" "AT4G14740" "AT4G14750" "AT4G14940"
## [932] "AT4G15210" "AT4G15510" "AT4G15810" "AT4G15960" "AT4G16140" "AT4G16141" "AT4G16370"
## [939] "AT4G16980" "AT4G17180" "AT4G17340" "AT4G17460" "AT4G17560" "AT4G17600" "AT4G17810"
## [946] "AT4G18197" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19170" "AT4G19380" "AT4G19530"
## [953] "AT4G20130" "AT4G20140" "AT4G20360" "AT4G20430" "AT4G20820" "AT4G20840" "AT4G21280"
## [960] "AT4G21870" "AT4G22120" "AT4G22690" "AT4G22890" "AT4G23000" "AT4G23290" "AT4G23740"
## [967] "AT4G23820" "AT4G23940" "AT4G24250" "AT4G24570" "AT4G24660" "AT4G24780" "AT4G24790"
## [974] "AT4G24810" "AT4G24930" "AT4G24972" "AT4G25050" "AT4G25080" "AT4G25100" "AT4G25200"
## [981] "AT4G25490" "AT4G25780" "AT4G25910" "AT4G25960" "AT4G25990" "AT4G26370" "AT4G26520"
## [988] "AT4G26530" "AT4G26540" "AT4G26542" "AT4G27030" "AT4G27440" "AT4G27720" "AT4G27730"
## [995] "AT4G27970" "AT4G27980" "AT4G28050" "AT4G28080" "AT4G28162" "AT4G28180"
## [ reached getOption("max.print") -- omitted 391 entries ]
##
## $`M12-V12_up`
## [1] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" "AT1G02710" "AT1G03130" "AT1G03300"
## [8] "AT1G03457" "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04730" "AT1G04980" "AT1G05420"
## [15] "AT1G06160" "AT1G06760" "AT1G07300" "AT1G07880" "AT1G08300" "AT1G08380" "AT1G08560"
## [22] "AT1G08900" "AT1G09080" "AT1G09200" "AT1G09440" "AT1G09750" "AT1G10020" "AT1G10380"
## [29] "AT1G10657" "AT1G10910" "AT1G10930" "AT1G10990" "AT1G11000" "AT1G11350" "AT1G11380"
## [36] "AT1G12460" "AT1G12700" "AT1G12730" "AT1G12860" "AT1G13110" "AT1G13650" "AT1G13700"
## [43] "AT1G14070" "AT1G14180" "AT1G14185" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15125"
## [50] "AT1G15550" "AT1G15890" "AT1G15980" "AT1G15990" "AT1G16640" "AT1G17147" "AT1G17990"
## [57] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550"
## [64] "AT1G18620" "AT1G18650" "AT1G19340" "AT1G19610" "AT1G19620" "AT1G20640" "AT1G21050"
## [71] "AT1G21120" "AT1G21130" "AT1G21326" "AT1G21580" "AT1G21910" "AT1G21920" "AT1G22330"
## [78] "AT1G22370" "AT1G22590" "AT1G22740" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205"
## [85] "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23750" "AT1G25440" "AT1G26150" "AT1G26420"
## [92] "AT1G26800" "AT1G27020" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G28400"
## [99] "AT1G28660" "AT1G28670" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [106] "AT1G29510" "AT1G29600" "AT1G29660" "AT1G29715" "AT1G30520" "AT1G30840" "AT1G31173"
## [113] "AT1G31355" "AT1G31820" "AT1G31835" "AT1G31920" "AT1G31950" "AT1G32740" "AT1G33055"
## [120] "AT1G33240" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34315" "AT1G35140" "AT1G36940"
## [127] "AT1G44900" "AT1G47890" "AT1G48260" "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49200"
## [134] "AT1G49230" "AT1G50040" "AT1G50180" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [141] "AT1G51850" "AT1G51920" "AT1G51940" "AT1G52190" "AT1G52230" "AT1G52750" "AT1G52800"
## [148] "AT1G53070" "AT1G53230" "AT1G53233" "AT1G53410" "AT1G54730" "AT1G54740" "AT1G54820"
## [155] "AT1G55330" "AT1G55370" "AT1G56220" "AT1G56720" "AT1G57943" "AT1G58225" "AT1G60390"
## [162] "AT1G60830" "AT1G60860" "AT1G61190" "AT1G61240" "AT1G61300" "AT1G61500" "AT1G61795"
## [169] "AT1G62520" "AT1G62790" "AT1G62910" "AT1G63080" "AT1G63260" "AT1G63400" "AT1G63530"
## [176] "AT1G63570" "AT1G63880" "AT1G64320" "AT1G64625" "AT1G65295" "AT1G65500" "AT1G65845"
## [183] "AT1G66180" "AT1G66810" "AT1G66920" "AT1G66940" "AT1G67590" "AT1G68190" "AT1G68520"
## [190] "AT1G68585" "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69780" "AT1G70100"
## [197] "AT1G70940" "AT1G71030" "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72270" "AT1G72416"
## [204] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G73110" "AT1G73830" "AT1G73890"
## [211] "AT1G74670" "AT1G74930" "AT1G74940" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75250"
## [218] "AT1G75388" "AT1G75390" "AT1G75750" "AT1G76100" "AT1G76960" "AT1G77131" "AT1G77138"
## [225] "AT1G77210" "AT1G77510" "AT1G77640" "AT1G77990" "AT1G78000" "AT1G78265" "AT1G78270"
## [232] "AT1G78450" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G79110" "AT1G79760" "AT1G79960"
## [239] "AT1G80630" "AT2G01420" "AT2G01630" "AT2G01860" "AT2G02020" "AT2G02780" "AT2G02950"
## [246] "AT2G02980" "AT2G03310" "AT2G03750" "AT2G05160" "AT2G05632" "AT2G05790" "AT2G06850"
## [253] "AT2G07680" "AT2G07690" "AT2G13550" "AT2G14050" "AT2G14660" "AT2G14890" "AT2G15880"
## [260] "AT2G15890" "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17740" "AT2G17780" "AT2G17880"
## [267] "AT2G18300" "AT2G18560" "AT2G18890" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20170"
## [274] "AT2G20180" "AT2G20950" "AT2G22810" "AT2G22830" "AT2G22890" "AT2G23100" "AT2G23290"
## [281] "AT2G23600" "AT2G24170" "AT2G24280" "AT2G24350" "AT2G24610" "AT2G25200" "AT2G25470"
## [288] "AT2G25680" "AT2G25790" "AT2G25900" "AT2G26710" "AT2G26870" "AT2G28040" "AT2G28050"
## [295] "AT2G28120" "AT2G28460" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950" "AT2G29290"
## [302] "AT2G29320" "AT2G29410" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30930" "AT2G31150"
## [309] "AT2G31751" "AT2G32100" "AT2G33020" "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33480"
## [316] "AT2G33830" "AT2G34510" "AT2G34620" "AT2G35170" "AT2G35260" "AT2G35590" "AT2G36050"
## [323] "AT2G36200" "AT2G36400" "AT2G36970" "AT2G37450" "AT2G37950" "AT2G39180" "AT2G39430"
## [330] "AT2G39580" "AT2G39730" "AT2G40100" "AT2G40530" "AT2G40610" "AT2G40711" "AT2G40850"
## [337] "AT2G41250" "AT2G41550" "AT2G41820" "AT2G41940" "AT2G42040" "AT2G42170" "AT2G42300"
## [344] "AT2G42320" "AT2G42380" "AT2G42690" "AT2G42940" "AT2G42960" "AT2G43150" "AT2G43445"
## [351] "AT2G44370" "AT2G44380" "AT2G44630" "AT2G44740" "AT2G45180" "AT2G45830" "AT2G45850"
## [358] "AT2G47440" "AT2G47480" "AT2G47920" "AT2G47930" "AT3G01480" "AT3G01490" "AT3G02370"
## [365] "AT3G02640" "AT3G03820" "AT3G04160" "AT3G04300" "AT3G04720" "AT3G04960" "AT3G05320"
## [372] "AT3G05740" "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06740" "AT3G07010"
## [379] "AT3G07210" "AT3G07460" "AT3G07540" "AT3G08600" "AT3G08940" "AT3G08970" "AT3G09160"
## [386] "AT3G09730" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10120" "AT3G10520" "AT3G10525"
## [393] "AT3G11110" "AT3G12110" "AT3G12150" "AT3G12170" "AT3G12610" "AT3G12820" "AT3G13000"
## [400] "AT3G13062" "AT3G13437" "AT3G14210" "AT3G14240" "AT3G14740" "AT3G15356" "AT3G15400"
## [407] "AT3G15450" "AT3G15570" "AT3G16175" "AT3G16250" "AT3G16520" "AT3G16530" "AT3G17160"
## [414] "AT3G18035" "AT3G18050" "AT3G18080" "AT3G18730" "AT3G18773" "AT3G19380" "AT3G19680"
## [421] "AT3G19850" "AT3G20015" "AT3G20200" "AT3G20350" "AT3G20820" "AT3G21060" "AT3G21500"
## [428] "AT3G22060" "AT3G22150" "AT3G22460" "AT3G22968" "AT3G22970" "AT3G23440" "AT3G23550"
## [435] "AT3G23730" "AT3G23740" "AT3G23880" "AT3G24760" "AT3G25130" "AT3G25500" "AT3G25717"
## [442] "AT3G26200" "AT3G26320" "AT3G26445" "AT3G26490" "AT3G26510" "AT3G26740" "AT3G26890"
## [449] "AT3G26932" "AT3G27060" "AT3G27360" "AT3G28040" "AT3G28070" "AT3G28860" "AT3G29035"
## [456] "AT3G29670" "AT3G29680" "AT3G30720" "AT3G42670" "AT3G44260" "AT3G45230" "AT3G45290"
## [463] "AT3G45330" "AT3G45850" "AT3G45940" "AT3G45980" "AT3G46320" "AT3G46550" "AT3G46580"
## [470] "AT3G48200" "AT3G48490" "AT3G48600" "AT3G49650" "AT3G50120" "AT3G50240" "AT3G50840"
## [477] "AT3G51220" "AT3G51740" "AT3G51910" "AT3G52070" "AT3G52072" "AT3G52630" "AT3G52720"
## [484] "AT3G53800" "AT3G54910" "AT3G55090" "AT3G55580" "AT3G56000" "AT3G56160" "AT3G58120"
## [491] "AT3G58620" "AT3G59120" "AT3G59250" "AT3G59550" "AT3G59780" "AT3G60320" "AT3G61820"
## [498] "AT3G62150" "AT3G62500" "AT3G62550" "AT3G62690" "AT3G62750" "AT4G00020" "AT4G00950"
## [505] "AT4G01330" "AT4G01460" "AT4G02060" "AT4G02075" "AT4G02110" "AT4G02330" "AT4G02540"
## [512] "AT4G02630" "AT4G02900" "AT4G03115" "AT4G03140" "AT4G03190" "AT4G03210" "AT4G05130"
## [519] "AT4G07400" "AT4G09160" "AT4G09430" "AT4G09432" "AT4G10120" "AT4G10380" "AT4G10600"
## [526] "AT4G11500" "AT4G12390" "AT4G12420" "AT4G12450" "AT4G12480" "AT4G12900" "AT4G12917"
## [533] "AT4G12980" "AT4G13100" "AT4G13340" "AT4G13493" "AT4G13494" "AT4G13495" "AT4G13560"
## [540] "AT4G13810" "AT4G14560" "AT4G14620" "AT4G14622" "AT4G14713" "AT4G14750" "AT4G14940"
## [547] "AT4G15540" "AT4G15810" "AT4G15960" "AT4G16141" "AT4G16370" "AT4G16563" "AT4G16980"
## [554] "AT4G17180" "AT4G17460" "AT4G17810" "AT4G18195" "AT4G18197" "AT4G18205" "AT4G18380"
## [561] "AT4G18540" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19090" "AT4G19170" "AT4G19370"
## [568] "AT4G19420" "AT4G19530" "AT4G19870" "AT4G20000" "AT4G20140" "AT4G20260" "AT4G20362"
## [575] "AT4G20430" "AT4G21445" "AT4G21870" "AT4G22560" "AT4G22690" "AT4G22710" "AT4G23290"
## [582] "AT4G23310" "AT4G23400" "AT4G24190" "AT4G24275" "AT4G24570" "AT4G26760" "AT4G27300"
## [589] "AT4G27440" "AT4G27730" "AT4G28160" "AT4G28162" "AT4G28310" "AT4G28350" "AT4G29310"
## [596] "AT4G30110" "AT4G30410" "AT4G31060" "AT4G31890" "AT4G32280" "AT4G32450" "AT4G32980"
## [603] "AT4G33000" "AT4G33010" "AT4G33560" "AT4G34220" "AT4G34760" "AT4G34770" "AT4G34790"
## [610] "AT4G34970" "AT4G34980" "AT4G35770" "AT4G36220" "AT4G36410" "AT4G36540" "AT4G36690"
## [617] "AT4G37800" "AT4G37925" "AT4G38080" "AT4G38400" "AT4G38700" "AT4G38840" "AT4G38860"
## [624] "AT4G38950" "AT4G39320" "AT5G01560" "AT5G01740" "AT5G01930" "AT5G02400" "AT5G02440"
## [631] "AT5G02540" "AT5G02760" "AT5G02890" "AT5G03120" "AT5G03150" "AT5G03552" "AT5G03830"
## [638] "AT5G04230" "AT5G05890" "AT5G06690" "AT5G07150" "AT5G07152" "AT5G07570" "AT5G07580"
## [645] "AT5G07590" "AT5G09730" "AT5G10150" "AT5G10250" "AT5G10260" "AT5G10530" "AT5G10690"
## [652] "AT5G10770" "AT5G11070" "AT5G11610" "AT5G11670" "AT5G12900" "AT5G13060" "AT5G13730"
## [659] "AT5G13990" "AT5G14350" "AT5G14920" "AT5G15350" "AT5G15580" "AT5G15770" "AT5G16000"
## [666] "AT5G16030" "AT5G16530" "AT5G18030" "AT5G18080" "AT5G18290" "AT5G18660" "AT5G19160"
## [673] "AT5G19190" "AT5G19810" "AT5G20410" "AT5G20450" "AT5G20635" "AT5G21222" "AT5G21930"
## [680] "AT5G22110" "AT5G22880" "AT5G22920" "AT5G22930" "AT5G23170" "AT5G23210" "AT5G23240"
## [687] "AT5G23280" "AT5G23480" "AT5G24000" "AT5G24010" "AT5G24490" "AT5G25130" "AT5G25190"
## [694] "AT5G25210" "AT5G25240" "AT5G25620" "AT5G25630" "AT5G26010" "AT5G27950" "AT5G28020"
## [701] "AT5G33280" "AT5G35732" "AT5G35750" "AT5G35790" "AT5G38140" "AT5G38410" "AT5G38420"
## [708] "AT5G38430" "AT5G39530" "AT5G39865" "AT5G40150" "AT5G41050" "AT5G41140" "AT5G41761"
## [715] "AT5G43700" "AT5G44020" "AT5G44130" "AT5G44260" "AT5G44600" "AT5G44635" "AT5G44650"
## [722] "AT5G44680" "AT5G45520" "AT5G45650" "AT5G45790" "AT5G46110" "AT5G46270" "AT5G46280"
## [729] "AT5G46440" "AT5G46690" "AT5G47220" "AT5G47230" "AT5G48320" "AT5G48360" "AT5G48670"
## [736] "AT5G48910" "AT5G49215" "AT5G49390" "AT5G49730" "AT5G49740" "AT5G50450" "AT5G51550"
## [743] "AT5G51560" "AT5G51590" "AT5G51670" "AT5G51790" "AT5G51970" "AT5G52100" "AT5G52280"
## [750] "AT5G52900" "AT5G52910" "AT5G53110" "AT5G53170" "AT5G54190" "AT5G54630" "AT5G54670"
## [757] "AT5G56100" "AT5G56220" "AT5G56580" "AT5G56840" "AT5G56850" "AT5G56870" "AT5G57550"
## [764] "AT5G57560" "AT5G57780" "AT5G58150" "AT5G58390" "AT5G59540" "AT5G59750" "AT5G59900"
## [771] "AT5G59970" "AT5G60100" "AT5G60490" "AT5G61000" "AT5G61160" "AT5G61590" "AT5G61660"
## [778] "AT5G62170" "AT5G62280" "AT5G62730" "AT5G63410" "AT5G63480" "AT5G63800" "AT5G64040"
## [785] "AT5G64120" "AT5G64330" "AT5G64410" "AT5G64630" "AT5G65350" "AT5G65360" "AT5G65600"
## [792] "AT5G65730" "AT5G66005" "AT5G66490" "AT5G66520" "AT5G66770" "AT5G66880" "AT5G67100"
##
## $`A12-V12_up`
## [1] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02470" "AT1G02920" "AT1G02930"
## [8] "AT1G03210" "AT1G03850" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07370" "AT1G08450"
## [15] "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420" "AT1G09500" "AT1G10070" "AT1G12290"
## [22] "AT1G13420" "AT1G13520" "AT1G14880" "AT1G15125" "AT1G15310" "AT1G15380" "AT1G15890"
## [29] "AT1G17020" "AT1G17147" "AT1G17460" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G21120"
## [36] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G25275" "AT1G26290" "AT1G26380" "AT1G26420"
## [43] "AT1G26800" "AT1G27330" "AT1G27350" "AT1G30420" "AT1G30860" "AT1G32210" "AT1G33030"
## [50] "AT1G33055" "AT1G33950" "AT1G33960" "AT1G35670" "AT1G36622" "AT1G44900" "AT1G47890"
## [57] "AT1G48260" "AT1G50520" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52200" "AT1G53110"
## [64] "AT1G53620" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G58180" "AT1G58225" "AT1G58590"
## [71] "AT1G61160" "AT1G61810" "AT1G61820" "AT1G62790" "AT1G63460" "AT1G65470" "AT1G65486"
## [78] "AT1G65490" "AT1G65845" "AT1G66345" "AT1G66960" "AT1G67520" "AT1G67630" "AT1G67810"
## [85] "AT1G67980" "AT1G68585" "AT1G69490" "AT1G69543" "AT1G69720" "AT1G71970" "AT1G72060"
## [92] "AT1G72070" "AT1G74590" "AT1G75170" "AT1G75830" "AT1G76960" "AT1G77145" "AT1G77920"
## [99] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79450" "AT1G79960" "AT1G80460"
## [106] "AT2G01818" "AT2G02060" "AT2G02350" "AT2G02360" "AT2G02930" "AT2G04515" "AT2G07690"
## [113] "AT2G14560" "AT2G14610" "AT2G17040" "AT2G18660" "AT2G19190" "AT2G21185" "AT2G21187"
## [120] "AT2G23170" "AT2G23840" "AT2G24040" "AT2G24240" "AT2G24390" "AT2G25625" "AT2G26560"
## [127] "AT2G27389" "AT2G27390" "AT2G27660" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28940"
## [134] "AT2G29350" "AT2G29470" "AT2G29950" "AT2G30480" "AT2G31020" "AT2G31730" "AT2G31865"
## [141] "AT2G32160" "AT2G32460" "AT2G32680" "AT2G33480" "AT2G33520" "AT2G37750" "AT2G39320"
## [148] "AT2G40110" "AT2G40550" "AT2G40880" "AT2G41082" "AT2G41250" "AT2G41380" "AT2G41440"
## [155] "AT2G43000" "AT2G43150" "AT2G44370" "AT2G44380" "AT2G44980" "AT2G45510" "AT2G46380"
## [162] "AT3G02820" "AT3G03470" "AT3G03610" "AT3G03650" "AT3G04070" "AT3G04720" "AT3G05740"
## [169] "AT3G05870" "AT3G07580" "AT3G07600" "AT3G07800" "AT3G10320" "AT3G11000" "AT3G11090"
## [176] "AT3G12220" "AT3G12230" "AT3G13433" "AT3G13437" "AT3G13790" "AT3G14280" "AT3G14700"
## [183] "AT3G14740" "AT3G15518" "AT3G18250" "AT3G18730" "AT3G19390" "AT3G19615" "AT3G19660"
## [190] "AT3G20340" "AT3G21780" "AT3G22460" "AT3G23740" "AT3G26210" "AT3G26220" "AT3G26230"
## [197] "AT3G26440" "AT3G26470" "AT3G26500" "AT3G28540" "AT3G28570" "AT3G28850" "AT3G28950"
## [204] "AT3G29240" "AT3G44300" "AT3G44490" "AT3G45290" "AT3G45330" "AT3G45860" "AT3G45930"
## [211] "AT3G47830" "AT3G47836" "AT3G48490" "AT3G48630" "AT3G48640" "AT3G49110" "AT3G49130"
## [218] "AT3G49540" "AT3G50550" "AT3G51250" "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920"
## [225] "AT3G52630" "AT3G52748" "AT3G53150" "AT3G53235" "AT3G54150" "AT3G56500" "AT3G56870"
## [232] "AT3G56891" "AT3G57240" "AT3G57550" "AT3G59100" "AT3G60540" "AT3G61198" "AT3G61390"
## [239] "AT3G62590" "AT3G62600" "AT3G63030" "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060"
## [246] "AT4G02110" "AT4G02520" "AT4G04620" "AT4G04740" "AT4G08770" "AT4G09750" "AT4G10860"
## [253] "AT4G11070" "AT4G11300" "AT4G13900" "AT4G14020" "AT4G14800" "AT4G15530" "AT4G15610"
## [260] "AT4G17660" "AT4G18360" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21610"
## [267] "AT4G21730" "AT4G22520" "AT4G23260" "AT4G23271" "AT4G25000" "AT4G25070" "AT4G25900"
## [274] "AT4G27745" "AT4G28310" "AT4G28390" "AT4G28405" "AT4G30640" "AT4G32870" "AT4G33355"
## [281] "AT4G33925" "AT4G34060" "AT4G34135" "AT4G36710" "AT4G37310" "AT4G37390" "AT4G37520"
## [288] "AT4G38080" "AT4G39190" "AT4G39580" "AT5G01550" "AT5G01610" "AT5G02502" "AT5G02520"
## [295] "AT5G02690" "AT5G03285" "AT5G04180" "AT5G05270" "AT5G05300" "AT5G06310" "AT5G07650"
## [302] "AT5G07660" "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08760" "AT5G09290"
## [309] "AT5G10390" "AT5G10400" "AT5G10440" "AT5G11920" "AT5G11950" "AT5G14420" "AT5G15860"
## [316] "AT5G15870" "AT5G17330" "AT5G20400" "AT5G20960" "AT5G22880" "AT5G23420" "AT5G24205"
## [323] "AT5G24206" "AT5G24230" "AT5G24910" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26731"
## [330] "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38900" "AT5G39520" "AT5G39680" "AT5G39950"
## [337] "AT5G40010" "AT5G40240" "AT5G40690" "AT5G40720" "AT5G41160" "AT5G41880" "AT5G42530"
## [344] "AT5G42830" "AT5G43910" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G46230" "AT5G46500"
## [351] "AT5G47220" "AT5G48180" "AT5G48290" "AT5G49690" "AT5G50460" "AT5G52720" "AT5G52910"
## [358] "AT5G52990" "AT5G53820" "AT5G54490" "AT5G54500" "AT5G54840" "AT5G55460" "AT5G56050"
## [365] "AT5G56120" "AT5G56870" "AT5G57010" "AT5G57550" "AT5G58840" "AT5G59530" "AT5G59662"
## [372] "AT5G59890" "AT5G60530" "AT5G61000" "AT5G61070" "AT5G61160" "AT5G61460" "AT5G61490"
## [379] "AT5G63135" "AT5G63240" "AT5G63550" "AT5G64000" "AT5G64190" "AT5G65350" "AT5G65360"
## [386] "AT5G66170" "AT5G67100" "AT5G67600"down <- DEG_list$Down; names(down) <- paste(names(down), "_down", sep="")
down## $`M1-A1_down`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT4G12480" "AT4G18540" "AT4G23550" "AT4G33980"
## [17] "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100"
##
## $`M1-V1_down`
## [1] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" "AT1G04280" "AT1G04620" "AT1G04990"
## [8] "AT1G05020" "AT1G05300" "AT1G05710" "AT1G06460" "AT1G07040" "AT1G07050" "AT1G07160"
## [15] "AT1G07420" "AT1G08980" "AT1G10040" "AT1G10070" "AT1G10200" "AT1G10710" "AT1G10990"
## [22] "AT1G11200" "AT1G11362" "AT1G11925" "AT1G11950" "AT1G12710" "AT1G12730" "AT1G13110"
## [29] "AT1G13270" "AT1G14170" "AT1G14540" "AT1G14870" "AT1G15125" "AT1G15670" "AT1G15890"
## [36] "AT1G16090" "AT1G17665" "AT1G19130" "AT1G19370" "AT1G20010" "AT1G20620" "AT1G20630"
## [43] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G22180" "AT1G22370"
## [50] "AT1G22480" "AT1G22490" "AT1G22770" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26380"
## [57] "AT1G26410" "AT1G26420" "AT1G26665" "AT1G27020" "AT1G27630" "AT1G28050" "AT1G28330"
## [64] "AT1G29160" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700" "AT1G30755"
## [71] "AT1G31690" "AT1G33030" "AT1G34380" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48605"
## [78] "AT1G49230" "AT1G49720" "AT1G51610" "AT1G51620" "AT1G51850" "AT1G51890" "AT1G51920"
## [85] "AT1G51940" "AT1G52200" "AT1G53035" "AT1G53100" "AT1G53625" "AT1G55450" "AT1G56140"
## [92] "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G59950" "AT1G60730"
## [99] "AT1G61360" "AT1G61420" "AT1G61550" "AT1G61560" "AT1G63180" "AT1G64110" "AT1G64760"
## [106] "AT1G65820" "AT1G66700" "AT1G66780" "AT1G67370" "AT1G67970" "AT1G67980" "AT1G68050"
## [113] "AT1G69520" "AT1G70220" "AT1G70800" "AT1G71000" "AT1G71400" "AT1G71520" "AT1G72330"
## [120] "AT1G72416" "AT1G74010" "AT1G75830" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77810"
## [127] "AT1G79440" "AT1G79460" "AT1G79680" "AT2G01540" "AT2G02010" "AT2G02100" "AT2G02220"
## [134] "AT2G02410" "AT2G02930" "AT2G05630" "AT2G05753" "AT2G14170" "AT2G15890" "AT2G16365"
## [141] "AT2G17740" "AT2G19190" "AT2G19450" "AT2G21130" "AT2G21660" "AT2G22450" "AT2G22970"
## [148] "AT2G22980" "AT2G23030" "AT2G23110" "AT2G24570" "AT2G24645" "AT2G25730" "AT2G25930"
## [155] "AT2G26560" "AT2G26650" "AT2G27200" "AT2G28190" "AT2G28930" "AT2G29720" "AT2G29740"
## [162] "AT2G30395" "AT2G30424" "AT2G30750" "AT2G30770" "AT2G31010" "AT2G33830" "AT2G35980"
## [169] "AT2G36390" "AT2G36815" "AT2G37430" "AT2G37940" "AT2G38465" "AT2G38860" "AT2G39200"
## [176] "AT2G39380" "AT2G39400" "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39900"
## [183] "AT2G39920" "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G42360" "AT2G43590"
## [190] "AT2G43620" "AT2G43940" "AT2G44080" "AT2G46940" "AT2G47390" "AT3G02800" "AT3G04420"
## [197] "AT3G05390" "AT3G07640" "AT3G07650" "AT3G09390" "AT3G09405" "AT3G10410" "AT3G11020"
## [204] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G13450" "AT3G13700" "AT3G13710"
## [211] "AT3G14360" "AT3G15356" "AT3G15518" "AT3G15620" "AT3G16180" "AT3G16360" "AT3G16530"
## [218] "AT3G16565" "AT3G18080" "AT3G19210" "AT3G19260" "AT3G19615" "AT3G20410" "AT3G21240"
## [225] "AT3G21470" "AT3G22460" "AT3G23280" "AT3G26500" "AT3G26670" "AT3G26680" "AT3G26740"
## [232] "AT3G26830" "AT3G27210" "AT3G27300" "AT3G28370" "AT3G30720" "AT3G43670" "AT3G43790"
## [239] "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46440" "AT3G46640" "AT3G46690" "AT3G47360"
## [246] "AT3G47800" "AT3G47860" "AT3G48490" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G50120"
## [253] "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50810" "AT3G51330" "AT3G52450" "AT3G54150"
## [260] "AT3G55150" "AT3G55450" "AT3G56500" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G59330"
## [267] "AT3G59350" "AT3G59700" "AT3G59900" "AT3G61160" "AT3G62150" "AT3G63160" "AT3G63380"
## [274] "AT4G01130" "AT4G01250" "AT4G01750" "AT4G02380" "AT4G02520" "AT4G03460" "AT4G04330"
## [281] "AT4G09020" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12470" "AT4G12480" "AT4G14270"
## [288] "AT4G15233" "AT4G16146" "AT4G16820" "AT4G17140" "AT4G18430" "AT4G18540" "AT4G18800"
## [295] "AT4G19120" "AT4G19390" "AT4G19410" "AT4G19810" "AT4G19880" "AT4G20000" "AT4G22710"
## [302] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23810" "AT4G25810" "AT4G25900" "AT4G26270"
## [309] "AT4G26670" "AT4G27130" "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G29600"
## [316] "AT4G30690" "AT4G31050" "AT4G31550" "AT4G31620" "AT4G32340" "AT4G33160" "AT4G33980"
## [323] "AT4G33985" "AT4G34580" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990" "AT4G35180"
## [330] "AT4G35380" "AT4G36760" "AT4G36770" "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410"
## [337] "AT4G38000" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G39230" "AT4G39270" "AT4G40070"
## [344] "AT5G02160" "AT5G02260" "AT5G02780" "AT5G03460" "AT5G05190" "AT5G05410" "AT5G06690"
## [351] "AT5G08380" "AT5G08490" "AT5G09500" "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150"
## [358] "AT5G11210" "AT5G11670" "AT5G12880" "AT5G12930" "AT5G14560" "AT5G15030" "AT5G15640"
## [365] "AT5G15840" "AT5G16380" "AT5G18470" "AT5G18525" "AT5G18540" "AT5G20950" "AT5G23235"
## [372] "AT5G23240" "AT5G23575" "AT5G23660" "AT5G24030" "AT5G24110" "AT5G24240" "AT5G24470"
## [379] "AT5G25340" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G33290"
## [386] "AT5G34780" "AT5G37740" "AT5G38895" "AT5G39410" "AT5G39580" "AT5G40240" "AT5G40760"
## [393] "AT5G41260" "AT5G42900" "AT5G44010" "AT5G44380" "AT5G44480" "AT5G44910" "AT5G46050"
## [400] "AT5G46600" "AT5G46860" "AT5G46871" "AT5G48250" "AT5G48430" "AT5G49015" "AT5G49900"
## [407] "AT5G50200" "AT5G51570" "AT5G51790" "AT5G53110" "AT5G54190" "AT5G54930" "AT5G54960"
## [414] "AT5G55050" "AT5G55090" "AT5G55530" "AT5G56580" "AT5G56960" "AT5G57110" "AT5G57220"
## [421] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G59310" "AT5G59530" "AT5G59570"
## [428] "AT5G60100" "AT5G61160" "AT5G61380" "AT5G61520" "AT5G61560" "AT5G62200" "AT5G62720"
## [435] "AT5G62900" "AT5G63810" "AT5G64660" "AT5G64860" "AT5G64905" "AT5G65600" "AT5G65609"
## [442] "AT5G66052" "AT5G66053" "AT5G66790"
##
## $`A1-V1_down`
## [1] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" "AT2G25730" "AT2G40080" "AT3G07640" "AT3G07650"
## [9] "AT4G01130" "AT4G04330" "AT4G26670" "AT4G33980" "AT5G02150" "AT5G11150" "AT5G39410" "AT5G42900"
## [17] "AT5G48250" "AT5G57110" "AT5G59570" "AT5G60100" "AT5G61380"
##
## $`M6-A6_down`
## [1] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01560" "AT1G01660" "AT1G01680"
## [8] "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450"
## [15] "AT1G02470" "AT1G02500" "AT1G02520" "AT1G02740" "AT1G02850" "AT1G02920" "AT1G02930"
## [22] "AT1G03050" "AT1G03495" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600"
## [29] "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05880"
## [36] "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06620" "AT1G07000" "AT1G07430" "AT1G07500"
## [43] "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08450" "AT1G08860" "AT1G09930" "AT1G09932"
## [50] "AT1G10040" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10990" "AT1G11330" "AT1G11905"
## [57] "AT1G12160" "AT1G12200" "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12940" "AT1G13310"
## [64] "AT1G13330" "AT1G13340" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550"
## [71] "AT1G13830" "AT1G14480" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15415" "AT1G15520"
## [78] "AT1G15790" "AT1G16090" "AT1G16150" "AT1G16300" "AT1G16420" "AT1G16670" "AT1G17170"
## [85] "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17744"
## [92] "AT1G17745" "AT1G17750" "AT1G17830" "AT1G18570" "AT1G18890" "AT1G18910" "AT1G19020"
## [99] "AT1G19250" "AT1G19540" "AT1G20310" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310"
## [106] "AT1G21370" "AT1G21390" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22180" "AT1G22220"
## [113] "AT1G22400" "AT1G22403" "AT1G23200" "AT1G23710" "AT1G23840" "AT1G23850" "AT1G24095"
## [120] "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G26130" "AT1G26380"
## [127] "AT1G26390" "AT1G26410" "AT1G26420" "AT1G27110" "AT1G27770" "AT1G28370" "AT1G28480"
## [134] "AT1G29195" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30190" "AT1G30270"
## [141] "AT1G30420" "AT1G30620" "AT1G30814" "AT1G30850" "AT1G30900" "AT1G31010" "AT1G31290"
## [148] "AT1G31880" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950" "AT1G32960"
## [155] "AT1G33030" "AT1G33110" "AT1G33420" "AT1G33430" "AT1G33560" "AT1G33720" "AT1G33730"
## [162] "AT1G33800" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35210"
## [169] "AT1G35230" "AT1G35710" "AT1G35910" "AT1G36622" "AT1G37130" "AT1G42980" "AT1G43910"
## [176] "AT1G44130" "AT1G45145" "AT1G47210" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320"
## [183] "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49050" "AT1G50400" "AT1G51640" "AT1G51645"
## [190] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51850" "AT1G51860" "AT1G51890" "AT1G51920"
## [197] "AT1G52315" "AT1G52540" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53620"
## [204] "AT1G53625" "AT1G54000" "AT1G54960" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [211] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G57560"
## [218] "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590" "AT1G59865" "AT1G60730" "AT1G61140"
## [225] "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61340" "AT1G61370" "AT1G61415"
## [232] "AT1G61420" "AT1G61550" "AT1G61640" "AT1G61800" "AT1G61810" "AT1G62320" "AT1G62422"
## [239] "AT1G62580" "AT1G63245" "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G64065"
## [246] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65690"
## [253] "AT1G65870" "AT1G66090" "AT1G66250" "AT1G66390" "AT1G66460" "AT1G66550" "AT1G66590"
## [260] "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67060"
## [267] "AT1G67070" "AT1G67360" "AT1G67520" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67800"
## [274] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67920" "AT1G67980" "AT1G68110" "AT1G68200"
## [281] "AT1G68250" "AT1G68390" "AT1G68620" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G69260"
## [288] "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69930" "AT1G70140"
## [295] "AT1G70170" "AT1G70690" "AT1G70990" "AT1G71390" "AT1G71690" "AT1G72000" "AT1G72220"
## [302] "AT1G72240" "AT1G72540" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72870"
## [309] "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010" "AT1G73130"
## [316] "AT1G73330" "AT1G73805" "AT1G73810" "AT1G73965" "AT1G74080" "AT1G74100" "AT1G74200"
## [323] "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750" "AT1G75040" "AT1G75060"
## [330] "AT1G75170" "AT1G75830" "AT1G76040" "AT1G76620" "AT1G76760" "AT1G76970" "AT1G76980"
## [337] "AT1G77500" "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78190" "AT1G78380"
## [344] "AT1G78410" "AT1G78780" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G80110" "AT1G80280"
## [351] "AT1G80300" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80830" "AT1G80840" "AT2G01180"
## [358] "AT2G01300" "AT2G01818" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02930" "AT2G03090"
## [365] "AT2G03505" "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450"
## [372] "AT2G04495" "AT2G04515" "AT2G05940" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13790"
## [379] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G16060" "AT2G16720"
## [386] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17440" "AT2G17500"
## [393] "AT2G17720" "AT2G18000" "AT2G18193" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G19190"
## [400] "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20562" "AT2G21188" "AT2G21350" "AT2G21470"
## [407] "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790" "AT2G22200" "AT2G22470" "AT2G23680"
## [414] "AT2G23810" "AT2G24285" "AT2G24490" "AT2G24850" "AT2G25190" "AT2G25240" "AT2G25260"
## [421] "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G26170" "AT2G26300" "AT2G26390"
## [428] "AT2G26400" "AT2G26480" "AT2G28160" "AT2G28210" "AT2G28400" "AT2G28570" "AT2G29100"
## [435] "AT2G29400" "AT2G29460" "AT2G29720" "AT2G29750" "AT2G29990" "AT2G30070" "AT2G30080"
## [442] "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018" "AT2G31020"
## [449] "AT2G31270" "AT2G31585" "AT2G31865" "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32130"
## [456] "AT2G32140" "AT2G32150" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32430" "AT2G32460"
## [463] "AT2G32590" "AT2G32960" "AT2G33110" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580"
## [470] "AT2G34610" "AT2G34650" "AT2G34940" "AT2G35710" "AT2G35980" "AT2G36026" "AT2G36270"
## [477] "AT2G36580" "AT2G36670" "AT2G36690" "AT2G37070" "AT2G37100" "AT2G37260" "AT2G37440"
## [484] "AT2G37560" "AT2G37710" "AT2G37750" "AT2G37890" "AT2G37980" "AT2G38290" "AT2G38340"
## [491] "AT2G38490" "AT2G38500" "AT2G38690" "AT2G38790" "AT2G38860" "AT2G39110" "AT2G39220"
## [498] "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650"
## [505] "AT2G40095" "AT2G40140" "AT2G40670" "AT2G40740" "AT2G41010" "AT2G41100" "AT2G41342"
## [512] "AT2G41380" "AT2G41410" "AT2G41660" "AT2G41835" "AT2G41880" "AT2G42060" "AT2G42350"
## [519] "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43050" "AT2G43140" "AT2G43290"
## [526] "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290"
## [533] "AT2G44578" "AT2G44600" "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45220" "AT2G45400"
## [540] "AT2G45760" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430" "AT2G46450"
## [547] "AT2G46620" "AT2G46680" "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47200" "AT2G47490"
## [554] "AT2G47670" "AT2G47720" "AT2G47730" "AT2G47800" "AT2G47820" "AT2G47950" "AT3G01290"
## [561] "AT3G01820" "AT3G01830" "AT3G01840" "AT3G02190" "AT3G02520" "AT3G02610" "AT3G02770"
## [568] "AT3G02800" "AT3G02820" "AT3G03310" "AT3G03440" "AT3G03450" "AT3G03610" "AT3G03700"
## [575] "AT3G03702" "AT3G03855" "AT3G04060" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04670"
## [582] "AT3G05330" "AT3G05360" "AT3G05500" "AT3G05650" "AT3G05830" "AT3G06490" "AT3G06890"
## [589] "AT3G07370" "AT3G07390" "AT3G07700" "AT3G07720" "AT3G08720" "AT3G08990" "AT3G09010"
## [596] "AT3G09032" "AT3G09280" "AT3G09405" "AT3G09450" "AT3G09480" "AT3G09520" "AT3G09790"
## [603] "AT3G09910" "AT3G09960" "AT3G10500" "AT3G10540" "AT3G10660" "AT3G10815" "AT3G10820"
## [610] "AT3G11000" "AT3G11010" "AT3G11080" "AT3G11220" "AT3G11340" "AT3G11420" "AT3G11600"
## [617] "AT3G11820" "AT3G11840" "AT3G12220" "AT3G12230" "AT3G12830" "AT3G12910" "AT3G13080"
## [624] "AT3G13090" "AT3G13100" "AT3G13380" "AT3G13433" "AT3G13610" "AT3G13782" "AT3G13900"
## [631] "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14460" "AT3G14470"
## [638] "AT3G14475" "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14710" "AT3G14840"
## [645] "AT3G14990" "AT3G15300" "AT3G15518" "AT3G15990" "AT3G16030" "AT3G16510" "AT3G16620"
## [652] "AT3G16800" "AT3G16980" "AT3G17240" "AT3G17280" "AT3G17420" "AT3G17520" "AT3G17609"
## [659] "AT3G17690" "AT3G17800" "AT3G18250" "AT3G19580" "AT3G19910" "AT3G19970" "AT3G20250"
## [666] "AT3G21080" "AT3G21140" "AT3G21150" "AT3G21220" "AT3G21240" "AT3G21320" "AT3G21520"
## [673] "AT3G21530" "AT3G21560" "AT3G21700" "AT3G22160" "AT3G22400" "AT3G22560" "AT3G22600"
## [680] "AT3G22910" "AT3G22930" "AT3G23110" "AT3G23120" "AT3G23240" "AT3G24900" "AT3G24927"
## [687] "AT3G25010" "AT3G25070" "AT3G25250" "AT3G25290" "AT3G25510" "AT3G25610" "AT3G25870"
## [694] "AT3G25882" "AT3G25890" "AT3G26210" "AT3G26440" "AT3G26470" "AT3G26680" "AT3G26690"
## [701] "AT3G26830" "AT3G26840" "AT3G27290" "AT3G27330" "AT3G27415" "AT3G27416" "AT3G27560"
## [708] "AT3G28007" "AT3G28340" "AT3G28510" "AT3G28540" "AT3G28570" "AT3G28580" "AT3G28840"
## [715] "AT3G28930" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G29590" "AT3G41979" "AT3G44300"
## [722] "AT3G44350" "AT3G44400" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G45040" "AT3G45330"
## [729] "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46510" "AT3G46520"
## [736] "AT3G46620" "AT3G47050" "AT3G47090" "AT3G47480" "AT3G47530" "AT3G47540" "AT3G47730"
## [743] "AT3G47780" "AT3G48020" "AT3G48080" "AT3G48090" "AT3G48100" "AT3G48240" "AT3G48490"
## [750] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48780" "AT3G48850" "AT3G49110" "AT3G49530"
## [757] "AT3G49540" "AT3G50280" "AT3G50470" "AT3G50480" "AT3G50760" "AT3G50770" "AT3G50800"
## [764] "AT3G50930" "AT3G51330" "AT3G51350" "AT3G51860" "AT3G52310" "AT3G52400" "AT3G52430"
## [771] "AT3G52460" "AT3G52470" "AT3G52540" "AT3G52630" "AT3G52870" "AT3G53120" "AT3G53150"
## [778] "AT3G53232" "AT3G53235" "AT3G53980" "AT3G54150" "AT3G54270" "AT3G54640" "AT3G55470"
## [785] "AT3G55500" "AT3G55730" "AT3G55880" "AT3G55950" "AT3G56170" "AT3G56275" "AT3G56400"
## [792] "AT3G56500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57100" "AT3G57260" "AT3G57330"
## [799] "AT3G57380" "AT3G57460" "AT3G57630" "AT3G57880" "AT3G57950" "AT3G59010" "AT3G59150"
## [806] "AT3G59700" "AT3G59750" "AT3G60110" "AT3G60164" "AT3G60190" "AT3G60420" "AT3G60450"
## [813] "AT3G60470" "AT3G60520" "AT3G60800" "AT3G60966" "AT3G60970" "AT3G61190" "AT3G61198"
## [820] "AT3G61390" "AT3G61450" "AT3G61960" "AT3G62260" "AT3G62760" "AT3G63010" "AT3G63060"
## [827] "AT3G63380" "AT4G00700" "AT4G00820" "AT4G00850" "AT4G01010" "AT4G01200" "AT4G01360"
## [834] "AT4G01430" "AT4G01535" "AT4G01540" "AT4G01870" "AT4G01895" "AT4G01920" "AT4G01950"
## [841] "AT4G02220" "AT4G02280" "AT4G02360" "AT4G02380" "AT4G02420" "AT4G02520" "AT4G02550"
## [848] "AT4G02660" "AT4G02760" "AT4G03450" "AT4G03460" "AT4G04220" "AT4G04221" "AT4G04223"
## [855] "AT4G04490" "AT4G04500" "AT4G04510" "AT4G04540" "AT4G04620" "AT4G04920" "AT4G05020"
## [862] "AT4G05030" "AT4G05390" "AT4G08300" "AT4G08555" "AT4G08770" "AT4G09300" "AT4G09570"
## [869] "AT4G09770" "AT4G09820" "AT4G10380" "AT4G10390" "AT4G10500" "AT4G10860" "AT4G10955"
## [876] "AT4G10960" "AT4G11170" "AT4G11240" "AT4G11340" "AT4G11350" "AT4G11655" "AT4G11840"
## [883] "AT4G11850" "AT4G11890" "AT4G12120" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [890] "AT4G13000" "AT4G13180" "AT4G13320" "AT4G13820" "AT4G13900" "AT4G13918" "AT4G13920"
## [897] "AT4G14090" "AT4G14220" "AT4G14365" "AT4G14368" "AT4G14370" "AT4G14630" "AT4G14690"
## [904] "AT4G15070" "AT4G15200" "AT4G15270" "AT4G15280" "AT4G15417" "AT4G15910" "AT4G16260"
## [911] "AT4G16350" "AT4G16600" "AT4G16820" "AT4G16960" "AT4G17250" "AT4G17660" "AT4G17670"
## [918] "AT4G17695" "AT4G18250" "AT4G18360" "AT4G18430" "AT4G18630" "AT4G19370" "AT4G19925"
## [925] "AT4G19970" "AT4G20000" "AT4G20110" "AT4G20460" "AT4G21400" "AT4G21500" "AT4G21610"
## [932] "AT4G21840" "AT4G21850" "AT4G21865" "AT4G21903" "AT4G21926" "AT4G21930" "AT4G22070"
## [939] "AT4G22520" "AT4G22530" "AT4G22590" "AT4G22592" "AT4G22880" "AT4G22980" "AT4G23030"
## [946] "AT4G23140" "AT4G23150" "AT4G23160" "AT4G23200" "AT4G23210" "AT4G23215" "AT4G23220"
## [953] "AT4G23250" "AT4G23280" "AT4G23300" "AT4G23310" "AT4G23320" "AT4G23450" "AT4G23470"
## [960] "AT4G23610" "AT4G23700" "AT4G24000" "AT4G24026" "AT4G24030" "AT4G24160" "AT4G25070"
## [967] "AT4G25390" "AT4G25880" "AT4G25900" "AT4G26060" "AT4G26120" "AT4G26270" "AT4G26400"
## [974] "AT4G26470" "AT4G26910" "AT4G26970" "AT4G26990" "AT4G27220" "AT4G27280" "AT4G27290"
## [981] "AT4G27480" "AT4G27745" "AT4G27830" "AT4G28390" "AT4G28490" "AT4G29440" "AT4G29740"
## [988] "AT4G29810" "AT4G29850" "AT4G30230" "AT4G30280" "AT4G30430" "AT4G30860" "AT4G31230"
## [995] "AT4G31500" "AT4G31860" "AT4G32870" "AT4G33040" "AT4G33050" "AT4G33300"
## [ reached getOption("max.print") -- omitted 343 entries ]
##
## $`M6-V6_down`
## [1] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520" "AT1G03010" "AT1G03200"
## [8] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G05100" "AT1G05840" "AT1G06620"
## [15] "AT1G07500" "AT1G07570" "AT1G08050" "AT1G09930" "AT1G09932" "AT1G10586" "AT1G11400"
## [22] "AT1G12160" "AT1G12380" "AT1G12540" "AT1G13150" "AT1G13310" "AT1G13330" "AT1G13340"
## [29] "AT1G13830" "AT1G14740" "AT1G15350" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G18200"
## [36] "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680" "AT1G20310"
## [43] "AT1G20460" "AT1G21240" "AT1G21740" "AT1G22180" "AT1G22220" "AT1G23060" "AT1G23850"
## [50] "AT1G26730" "AT1G26770" "AT1G26930" "AT1G28130" "AT1G28370" "AT1G29640" "AT1G30100"
## [57] "AT1G30160" "AT1G30850" "AT1G31120" "AT1G31770" "AT1G31900" "AT1G32870" "AT1G33110"
## [64] "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G37130" "AT1G43160" "AT1G43245"
## [71] "AT1G43910" "AT1G44130" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605"
## [78] "AT1G49520" "AT1G49530" "AT1G51760" "AT1G51780" "AT1G51860" "AT1G52030" "AT1G52565"
## [85] "AT1G52855" "AT1G52890" "AT1G53830" "AT1G54010" "AT1G54030" "AT1G54095" "AT1G55610"
## [92] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G58030" "AT1G59640" "AT1G60190" "AT1G60730"
## [99] "AT1G61110" "AT1G61120" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61550" "AT1G63840"
## [106] "AT1G65481" "AT1G65690" "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66280" "AT1G66350"
## [113] "AT1G66960" "AT1G67420" "AT1G67635" "AT1G67820" "AT1G68110" "AT1G69260" "AT1G69360"
## [120] "AT1G69480" "AT1G69530" "AT1G70690" "AT1G70790" "AT1G71110" "AT1G71390" "AT1G72210"
## [127] "AT1G72410" "AT1G72540" "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G74100"
## [134] "AT1G74430" "AT1G74710" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G76620" "AT1G76640"
## [141] "AT1G76980" "AT1G77280" "AT1G77760" "AT1G78290" "AT1G78780" "AT1G79270" "AT1G79310"
## [148] "AT1G80110" "AT1G80280" "AT1G80590" "AT1G80840" "AT2G01830" "AT2G02340" "AT2G04070"
## [155] "AT2G04430" "AT2G04450" "AT2G05940" "AT2G06255" "AT2G14610" "AT2G14620" "AT2G15760"
## [162] "AT2G16650" "AT2G16720" "AT2G17500" "AT2G18660" "AT2G20110" "AT2G20142" "AT2G21188"
## [169] "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G25690" "AT2G26300" "AT2G26390"
## [176] "AT2G26400" "AT2G26480" "AT2G27228" "AT2G27230" "AT2G27300" "AT2G28110" "AT2G28450"
## [183] "AT2G28570" "AT2G29100" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30540" "AT2G30770"
## [190] "AT2G30820" "AT2G30830" "AT2G31180" "AT2G32130" "AT2G32140" "AT2G32460" "AT2G32930"
## [197] "AT2G34010" "AT2G34070" "AT2G34080" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36640"
## [204] "AT2G37070" "AT2G37440" "AT2G37750" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490"
## [211] "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300" "AT2G39435" "AT2G39800" "AT2G40200"
## [218] "AT2G40460" "AT2G40670" "AT2G41070" "AT2G42060" "AT2G42760" "AT2G42890" "AT2G43000"
## [225] "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680" "AT2G44578" "AT2G44600"
## [232] "AT2G44840" "AT2G44940" "AT2G45245" "AT2G45760" "AT2G45920" "AT2G46040" "AT2G46400"
## [239] "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46900" "AT2G46970" "AT2G47000"
## [246] "AT2G47420" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01770" "AT3G02210" "AT3G02885"
## [253] "AT3G02990" "AT3G03310" "AT3G03440" "AT3G04000" "AT3G04420" "AT3G05500" "AT3G06020"
## [260] "AT3G06490" "AT3G06890" "AT3G09600" "AT3G09960" "AT3G10815" "AT3G11210" "AT3G11450"
## [267] "AT3G11480" "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13610"
## [274] "AT3G13730" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870" "AT3G15536" "AT3G15950"
## [281] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17420" "AT3G17510"
## [288] "AT3G17690" "AT3G17860" "AT3G19100" "AT3G19970" "AT3G20250" "AT3G21080" "AT3G21320"
## [295] "AT3G21500" "AT3G21670" "AT3G21700" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G24518"
## [302] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25890" "AT3G26440" "AT3G26470"
## [309] "AT3G27170" "AT3G27415" "AT3G27416" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510"
## [316] "AT3G28580" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G46658" "AT3G46660" "AT3G47420"
## [323] "AT3G47480" "AT3G47730" "AT3G48090" "AT3G48100" "AT3G48115" "AT3G48520" "AT3G48580"
## [330] "AT3G48630" "AT3G48700" "AT3G48780" "AT3G50770" "AT3G50930" "AT3G51090" "AT3G51670"
## [337] "AT3G51860" "AT3G52430" "AT3G53210" "AT3G54320" "AT3G54366" "AT3G55060" "AT3G55500"
## [344] "AT3G55970" "AT3G56170" "AT3G56260" "AT3G57260" "AT3G57380" "AT3G57460" "AT3G57950"
## [351] "AT3G59750" "AT3G59930" "AT3G60420" "AT3G60470" "AT3G60490" "AT3G60961" "AT3G60966"
## [358] "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61890" "AT3G61930"
## [365] "AT3G63010" "AT3G63380" "AT4G00700" "AT4G01430" "AT4G01535" "AT4G01540" "AT4G02360"
## [372] "AT4G02380" "AT4G02760" "AT4G03460" "AT4G04223" "AT4G04490" "AT4G04500" "AT4G04510"
## [379] "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06744" "AT4G09770" "AT4G10390" "AT4G10500"
## [386] "AT4G11240" "AT4G11350" "AT4G11990" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720"
## [393] "AT4G12735" "AT4G14630" "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G16260"
## [400] "AT4G16350" "AT4G17660" "AT4G17670" "AT4G17730" "AT4G20320" "AT4G21680" "AT4G21790"
## [407] "AT4G22070" "AT4G23150" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G25390" "AT4G25433"
## [414] "AT4G26080" "AT4G26120" "AT4G26470" "AT4G27590" "AT4G27860" "AT4G27870" "AT4G29380"
## [421] "AT4G29740" "AT4G29930" "AT4G30180" "AT4G32920" "AT4G33150" "AT4G34200" "AT4G34650"
## [428] "AT4G35600" "AT4G35720" "AT4G36010" "AT4G36430" "AT4G36640" "AT4G36780" "AT4G36950"
## [435] "AT4G37850" "AT4G37900" "AT4G38560" "AT4G39030" "AT4G39190" "AT4G39950" "AT5G01840"
## [442] "AT5G01850" "AT5G02100" "AT5G02170" "AT5G03210" "AT5G03435" "AT5G03668" "AT5G03670"
## [449] "AT5G03680" "AT5G04860" "AT5G04950" "AT5G05680" "AT5G06110" "AT5G06610" "AT5G07650"
## [456] "AT5G08620" "AT5G10380" "AT5G11210" "AT5G11390" "AT5G11870" "AT5G13210" "AT5G13220"
## [463] "AT5G13320" "AT5G13820" "AT5G14090" "AT5G14390" "AT5G14700" "AT5G14760" "AT5G15190"
## [470] "AT5G16170" "AT5G16360" "AT5G17330" "AT5G17490" "AT5G17760" "AT5G19110" "AT5G20700"
## [477] "AT5G20960" "AT5G21280" "AT5G21950" "AT5G22540" "AT5G22545" "AT5G22630" "AT5G23160"
## [484] "AT5G23380" "AT5G23590" "AT5G24090" "AT5G24200" "AT5G24240" "AT5G24280" "AT5G24290"
## [491] "AT5G24910" "AT5G26170" "AT5G26270" "AT5G26920" "AT5G28919" "AT5G28920" "AT5G33355"
## [498] "AT5G38130" "AT5G38250" "AT5G38350" "AT5G39610" "AT5G39670" "AT5G40210" "AT5G41180"
## [505] "AT5G41315" "AT5G41610" "AT5G41612" "AT5G41730" "AT5G42050" "AT5G43170" "AT5G44350"
## [512] "AT5G44380" "AT5G44390" "AT5G44460" "AT5G44990" "AT5G45070" "AT5G45080" "AT5G45090"
## [519] "AT5G45110" "AT5G45630" "AT5G46410" "AT5G46840" "AT5G47960" "AT5G48400" "AT5G48410"
## [526] "AT5G49100" "AT5G49280" "AT5G49560" "AT5G51380" "AT5G52720" "AT5G52730" "AT5G52882"
## [533] "AT5G53290" "AT5G53360" "AT5G54240" "AT5G54700" "AT5G56050" "AT5G56880" "AT5G57320"
## [540] "AT5G58570" "AT5G58620" "AT5G59220" "AT5G59480" "AT5G59580" "AT5G59590" "AT5G59780"
## [547] "AT5G60310" "AT5G60800" "AT5G60890" "AT5G61900" "AT5G61960" "AT5G62150" "AT5G62190"
## [554] "AT5G62480" "AT5G62920" "AT5G63225" "AT5G63450" "AT5G64530" "AT5G64570" "AT5G64572"
## [561] "AT5G64700" "AT5G64810" "AT5G65280" "AT5G65380" "AT5G66052" "AT5G66053" "AT5G66170"
## [568] "AT5G66630" "AT5G66650" "AT5G67080" "AT5G67160" "AT5G67200"
##
## $`A6-V6_down`
## [1] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" "AT1G12540" "AT1G16370" "AT1G16400"
## [8] "AT1G16410" "AT1G19650" "AT1G19670" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [15] "AT1G28010" "AT1G29280" "AT1G31770" "AT1G34210" "AT1G49520" "AT1G49530" "AT1G51780"
## [22] "AT1G54095" "AT1G63040" "AT1G63570" "AT1G65590" "AT1G66280" "AT1G69370" "AT1G69480"
## [29] "AT1G72140" "AT1G72180" "AT1G72450" "AT1G73210" "AT1G74430" "AT1G74950" "AT1G75540"
## [36] "AT2G01830" "AT2G02990" "AT2G03980" "AT2G06255" "AT2G22200" "AT2G22770" "AT2G22930"
## [43] "AT2G23760" "AT2G25130" "AT2G27228" "AT2G27230" "AT2G30540" "AT2G30820" "AT2G30830"
## [50] "AT2G34010" "AT2G34070" "AT2G35950" "AT2G36350" "AT2G36380" "AT2G36815" "AT2G36830"
## [57] "AT2G37180" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G39250" "AT2G39800" "AT2G40460"
## [64] "AT2G42760" "AT2G47600" "AT2G47950" "AT3G01180" "AT3G02990" "AT3G06020" "AT3G11470"
## [71] "AT3G11480" "AT3G14870" "AT3G15720" "AT3G16460" "AT3G17510" "AT3G17860" "AT3G19100"
## [78] "AT3G21670" "AT3G23910" "AT3G27170" "AT3G27960" "AT3G43270" "AT3G47750" "AT3G48350"
## [85] "AT3G48520" "AT3G54820" "AT3G55290" "AT3G55970" "AT3G56260" "AT3G57780" "AT3G59710"
## [92] "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61890" "AT3G62700" "AT4G03060" "AT4G03400"
## [99] "AT4G10060" "AT4G10390" "AT4G12030" "AT4G15430" "AT4G16740" "AT4G22200" "AT4G23420"
## [106] "AT4G25433" "AT4G25780" "AT4G27870" "AT4G32780" "AT4G36010" "AT4G37850" "AT5G01840"
## [113] "AT5G02260" "AT5G07690" "AT5G11160" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G15190"
## [120] "AT5G17490" "AT5G19110" "AT5G21280" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G26260"
## [127] "AT5G26270" "AT5G27350" "AT5G41120" "AT5G42650" "AT5G44350" "AT5G52120" "AT5G52882"
## [134] "AT5G53290" "AT5G54300" "AT5G57340" "AT5G57800" "AT5G60890" "AT5G61890" "AT5G62470"
## [141] "AT5G62920" "AT5G63450" "AT5G64750" "AT5G65280" "AT5G66052" "AT5G67150" "AT5G67160"
##
## $`M12-A12_down`
## [1] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390" "AT1G02405"
## [15] "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02660" "AT1G02750" "AT1G03050" "AT1G03180"
## [22] "AT1G03210" "AT1G03290" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03660" "AT1G03850"
## [29] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [36] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05680" "AT1G05835"
## [43] "AT1G05880" "AT1G06180" "AT1G06620" "AT1G06660" "AT1G07000" "AT1G07020" "AT1G07430"
## [50] "AT1G07476" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620" "AT1G07630"
## [57] "AT1G08050" "AT1G08630" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240"
## [64] "AT1G09350" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09794" "AT1G09930" "AT1G09932"
## [71] "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10410" "AT1G10417" "AT1G10520" "AT1G10585"
## [78] "AT1G10690" "AT1G10710" "AT1G11100" "AT1G11330" "AT1G11362" "AT1G11400" "AT1G11480"
## [85] "AT1G11785" "AT1G11905" "AT1G12320" "AT1G12540" "AT1G13310" "AT1G13330" "AT1G13340"
## [92] "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550" "AT1G13990" "AT1G14260"
## [99] "AT1G14330" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15010" "AT1G15040" "AT1G15380"
## [106] "AT1G15405" "AT1G15415" "AT1G15520" "AT1G15670" "AT1G15790" "AT1G15800" "AT1G16150"
## [113] "AT1G16300" "AT1G16420" "AT1G16500" "AT1G16670" "AT1G17020" "AT1G17380" "AT1G17490"
## [120] "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17745" "AT1G17750" "AT1G18570" "AT1G18890"
## [127] "AT1G19020" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19250" "AT1G19270"
## [134] "AT1G19490" "AT1G19640" "AT1G20310" "AT1G20740" "AT1G20780" "AT1G21000" "AT1G21200"
## [141] "AT1G21210" "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21520"
## [148] "AT1G21525" "AT1G21740" "AT1G21930" "AT1G22180" "AT1G22220" "AT1G22280" "AT1G22400"
## [155] "AT1G22403" "AT1G22410" "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22840" "AT1G22985"
## [162] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23560" "AT1G23840" "AT1G23850"
## [169] "AT1G24140" "AT1G24145" "AT1G24147" "AT1G24150" "AT1G25400" "AT1G26130" "AT1G26200"
## [176] "AT1G26290" "AT1G26330" "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26762"
## [183] "AT1G26930" "AT1G27110" "AT1G27300" "AT1G27980" "AT1G28190" "AT1G28360" "AT1G28370"
## [190] "AT1G28480" "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30135"
## [197] "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30473" "AT1G30620" "AT1G30700" "AT1G30755"
## [204] "AT1G30814" "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31290" "AT1G31540"
## [211] "AT1G31550" "AT1G31900" "AT1G32210" "AT1G32350" "AT1G32560" "AT1G32870" "AT1G32910"
## [218] "AT1G32920" "AT1G32940" "AT1G32950" "AT1G32960" "AT1G33030" "AT1G33420" "AT1G33430"
## [225] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420"
## [232] "AT1G34750" "AT1G35210" "AT1G35230" "AT1G35580" "AT1G35710" "AT1G35910" "AT1G36622"
## [239] "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910" "AT1G44130" "AT1G45145" "AT1G47056"
## [246] "AT1G47510" "AT1G48000" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870"
## [253] "AT1G49050" "AT1G49450" "AT1G49900" "AT1G50420" "AT1G50560" "AT1G50740" "AT1G51130"
## [260] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780" "AT1G51790" "AT1G51800" "AT1G51860"
## [267] "AT1G51890" "AT1G52200" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52855"
## [274] "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53620" "AT1G53625" "AT1G53830" "AT1G53920"
## [281] "AT1G54100" "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54890" "AT1G55610" "AT1G55790"
## [288] "AT1G56120" "AT1G56240" "AT1G56242" "AT1G56470" "AT1G56550" "AT1G56650" "AT1G56660"
## [295] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G59590" "AT1G59640" "AT1G59740"
## [302] "AT1G59950" "AT1G60190" "AT1G60420" "AT1G60610" "AT1G60730" "AT1G60890" "AT1G61065"
## [309] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [316] "AT1G61560" "AT1G61800" "AT1G61810" "AT1G61820" "AT1G62300" "AT1G62422" "AT1G62570"
## [323] "AT1G62580" "AT1G62840" "AT1G63245" "AT1G63440" "AT1G63460" "AT1G63720" "AT1G63740"
## [330] "AT1G63820" "AT1G63840" "AT1G64065" "AT1G64610" "AT1G64660" "AT1G65483" "AT1G65490"
## [337] "AT1G65610" "AT1G65690" "AT1G66040" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66410"
## [344] "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66880"
## [351] "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67190" "AT1G67195" "AT1G67360"
## [358] "AT1G67520" "AT1G67635" "AT1G67650" "AT1G67800" "AT1G67810" "AT1G67850" "AT1G67856"
## [365] "AT1G67970" "AT1G67980" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68440" "AT1G68620"
## [372] "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68820" "AT1G69050" "AT1G69260" "AT1G69480"
## [379] "AT1G69490" "AT1G69520" "AT1G69610" "AT1G69720" "AT1G69790" "AT1G69840" "AT1G69880"
## [386] "AT1G69930" "AT1G70220" "AT1G70480" "AT1G70640" "AT1G70690" "AT1G70810" "AT1G71100"
## [393] "AT1G71520" "AT1G71690" "AT1G71697" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125"
## [400] "AT1G72220" "AT1G72240" "AT1G72330" "AT1G72420" "AT1G72540" "AT1G72680" "AT1G72690"
## [407] "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [414] "AT1G72950" "AT1G73010" "AT1G73260" "AT1G73550" "AT1G73805" "AT1G73810" "AT1G73965"
## [421] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74710" "AT1G75170" "AT1G75510"
## [428] "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470" "AT1G76590"
## [435] "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000" "AT1G77145" "AT1G77280"
## [442] "AT1G77500" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78190" "AT1G78260"
## [449] "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78570" "AT1G78780" "AT1G79400" "AT1G79450"
## [456] "AT1G79680" "AT1G79900" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [463] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01540"
## [470] "AT2G01650" "AT2G01818" "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350"
## [477] "AT2G02390" "AT2G02870" "AT2G03270" "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100"
## [484] "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04900" "AT2G05320"
## [491] "AT2G05630" "AT2G05910" "AT2G05940" "AT2G06255" "AT2G07687" "AT2G07688" "AT2G07732"
## [498] "AT2G13790" "AT2G13810" "AT2G13960" "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620"
## [505] "AT2G15400" "AT2G15760" "AT2G15860" "AT2G16060" "AT2G16367" "AT2G16530" "AT2G16700"
## [512] "AT2G16710" "AT2G16720" "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17500"
## [519] "AT2G17720" "AT2G18000" "AT2G18660" "AT2G18690" "AT2G19190" "AT2G19690" "AT2G19710"
## [526] "AT2G19800" "AT2G20110" "AT2G20142" "AT2G20825" "AT2G21188" "AT2G21350" "AT2G21470"
## [533] "AT2G21510" "AT2G21780" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [540] "AT2G22770" "AT2G23030" "AT2G23110" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23680"
## [547] "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24240" "AT2G24285" "AT2G24850" "AT2G25130"
## [554] "AT2G25190" "AT2G25240" "AT2G25260" "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25625"
## [561] "AT2G25737" "AT2G26190" "AT2G26290" "AT2G26300" "AT2G26400" "AT2G26480" "AT2G26530"
## [568] "AT2G26560" "AT2G26750" "AT2G27389" "AT2G27390" "AT2G27430" "AT2G27510" "AT2G27690"
## [575] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28160" "AT2G28400" "AT2G28500" "AT2G28570"
## [582] "AT2G28890" "AT2G29070" "AT2G29110" "AT2G29350" "AT2G29400" "AT2G29460" "AT2G29470"
## [589] "AT2G29480" "AT2G29680" "AT2G29720" "AT2G29750" "AT2G29950" "AT2G29990" "AT2G30080"
## [596] "AT2G30140" "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018"
## [603] "AT2G31020" "AT2G31200" "AT2G31305" "AT2G31390" "AT2G31570" "AT2G31865" "AT2G31870"
## [610] "AT2G31880" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32160" "AT2G32190"
## [617] "AT2G32210" "AT2G32460" "AT2G32510" "AT2G32660" "AT2G32670" "AT2G32680" "AT2G33380"
## [624] "AT2G33520" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580" "AT2G34600" "AT2G34610"
## [631] "AT2G34940" "AT2G35000" "AT2G35070" "AT2G35290" "AT2G35550" "AT2G35730" "AT2G35810"
## [638] "AT2G35940" "AT2G35950" "AT2G36640" "AT2G36854" "AT2G37070" "AT2G37110" "AT2G37440"
## [645] "AT2G37670" "AT2G37750" "AT2G37760" "AT2G37870" "AT2G37980" "AT2G38240" "AT2G38250"
## [652] "AT2G38340" "AT2G38490" "AT2G38790" "AT2G38860" "AT2G39030" "AT2G39050" "AT2G39110"
## [659] "AT2G39210" "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39420" "AT2G39518" "AT2G39520"
## [666] "AT2G39530" "AT2G40095" "AT2G40113" "AT2G40140" "AT2G40330" "AT2G40340" "AT2G40435"
## [673] "AT2G40750" "AT2G41070" "AT2G41090" "AT2G41100" "AT2G41200" "AT2G41342" "AT2G41380"
## [680] "AT2G41410" "AT2G41660" "AT2G41835" "AT2G42060" "AT2G42350" "AT2G42560" "AT2G42950"
## [687] "AT2G43000" "AT2G43040" "AT2G43140" "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43820"
## [694] "AT2G44180" "AT2G44383" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G45170" "AT2G45210"
## [701] "AT2G45220" "AT2G45330" "AT2G45500" "AT2G45570" "AT2G45660" "AT2G45695" "AT2G45760"
## [708] "AT2G45770" "AT2G46040" "AT2G46270" "AT2G46380" "AT2G46400" "AT2G46430" "AT2G46440"
## [715] "AT2G46510" "AT2G46620" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46940" "AT2G46980"
## [722] "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47190" "AT2G47200" "AT2G47560" "AT2G47640"
## [729] "AT2G47720" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01080" "AT3G01290" "AT3G01830"
## [736] "AT3G01840" "AT3G01970" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02190" "AT3G02770"
## [743] "AT3G02800" "AT3G03310" "AT3G03341" "AT3G03440" "AT3G03450" "AT3G03460" "AT3G03470"
## [750] "AT3G03490" "AT3G03560" "AT3G03610" "AT3G03650" "AT3G03700" "AT3G03702" "AT3G04000"
## [757] "AT3G04060" "AT3G04070" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04620" "AT3G04640"
## [764] "AT3G05330" "AT3G05360" "AT3G05390" "AT3G05500" "AT3G05830" "AT3G05870" "AT3G06320"
## [771] "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06890" "AT3G07195" "AT3G07370" "AT3G07600"
## [778] "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720" "AT3G08760" "AT3G08870" "AT3G08990"
## [785] "AT3G09270" "AT3G09280" "AT3G09490" "AT3G09830" "AT3G09910" "AT3G09940" "AT3G09960"
## [792] "AT3G10010" "AT3G10310" "AT3G10320" "AT3G10420" "AT3G10490" "AT3G10500" "AT3G10640"
## [799] "AT3G10815" "AT3G11000" "AT3G11010" "AT3G11040" "AT3G11080" "AT3G11150" "AT3G11330"
## [806] "AT3G11340" "AT3G11480" "AT3G11580" "AT3G11820" "AT3G11840" "AT3G12040" "AT3G12220"
## [813] "AT3G12230" "AT3G12320" "AT3G12510" "AT3G12760" "AT3G12830" "AT3G13080" "AT3G13090"
## [820] "AT3G13100" "AT3G13235" "AT3G13380" "AT3G13430" "AT3G13432" "AT3G13520" "AT3G13610"
## [827] "AT3G13730" "AT3G13782" "AT3G13900" "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060"
## [834] "AT3G14130" "AT3G14280" "AT3G14430" "AT3G14440" "AT3G14470" "AT3G14475" "AT3G14560"
## [841] "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14840" "AT3G15355" "AT3G15500"
## [848] "AT3G15518" "AT3G15534" "AT3G15536" "AT3G15760" "AT3G15770" "AT3G16150" "AT3G16330"
## [855] "AT3G16565" "AT3G16980" "AT3G16990" "AT3G17000" "AT3G17380" "AT3G17420" "AT3G17609"
## [862] "AT3G17690" "AT3G17790" "AT3G17800" "AT3G17810" "AT3G17820" "AT3G18240" "AT3G18250"
## [869] "AT3G18260" "AT3G18560" "AT3G19010" "AT3G19270" "AT3G19390" "AT3G19580" "AT3G19615"
## [876] "AT3G19660" "AT3G19910" "AT3G19970" "AT3G20340" "AT3G21080" "AT3G21150" "AT3G21230"
## [883] "AT3G21295" "AT3G21320" "AT3G21520" "AT3G21700" "AT3G21810" "AT3G22160" "AT3G22235"
## [890] "AT3G22370" "AT3G22400" "AT3G22560" "AT3G22600" "AT3G22840" "AT3G22910" "AT3G22961"
## [897] "AT3G23120" "AT3G23240" "AT3G24320" "AT3G24460" "AT3G25010" "AT3G25020" "AT3G25250"
## [904] "AT3G25290" "AT3G25400" "AT3G25510" "AT3G25870" "AT3G25882" "AT3G26090" "AT3G26210"
## [911] "AT3G26220" "AT3G26440" "AT3G26460" "AT3G26470" "AT3G26500" "AT3G26600" "AT3G26690"
## [918] "AT3G26830" "AT3G26840" "AT3G27210" "AT3G27290" "AT3G27415" "AT3G27416" "AT3G27809"
## [925] "AT3G27810" "AT3G28007" "AT3G28210" "AT3G28340" "AT3G28480" "AT3G28510" "AT3G28540"
## [932] "AT3G28570" "AT3G28580" "AT3G28600" "AT3G28850" "AT3G28890" "AT3G28930" "AT3G29240"
## [939] "AT3G29250" "AT3G29575" "AT3G30775" "AT3G41768" "AT3G43250" "AT3G44300" "AT3G44326"
## [946] "AT3G44350" "AT3G44400" "AT3G44490" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [953] "AT3G45130" "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46280"
## [960] "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46690" "AT3G46930" "AT3G47090" "AT3G47340"
## [967] "AT3G47480" "AT3G47490" "AT3G47530" "AT3G47540" "AT3G47780" "AT3G48020" "AT3G48080"
## [974] "AT3G48090" "AT3G48240" "AT3G48390" "AT3G48490" "AT3G48520" "AT3G48570" "AT3G48580"
## [981] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48700" "AT3G48770" "AT3G48850" "AT3G49110"
## [988] "AT3G49120" "AT3G49130" "AT3G49540" "AT3G49580" "AT3G49645" "AT3G50260" "AT3G50280"
## [995] "AT3G50310" "AT3G50470" "AT3G50480" "AT3G50550" "AT3G50760" "AT3G50770"
## [ reached getOption("max.print") -- omitted 812 entries ]
##
## $`M12-V12_down`
## [1] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02750" "AT1G03050" "AT1G04310"
## [22] "AT1G04490" "AT1G04570" "AT1G04700" "AT1G04780" "AT1G05100" "AT1G05680" "AT1G05690"
## [29] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06180" "AT1G06570" "AT1G06620"
## [36] "AT1G07150" "AT1G07430" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07670"
## [43] "AT1G08050" "AT1G08860" "AT1G08920" "AT1G09180" "AT1G09240" "AT1G09350" "AT1G09530"
## [50] "AT1G09950" "AT1G10230" "AT1G10340" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [57] "AT1G10586" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G11185" "AT1G11400" "AT1G11480"
## [64] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12540" "AT1G13280" "AT1G13310" "AT1G13330"
## [71] "AT1G13340" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14120" "AT1G14260"
## [78] "AT1G15010" "AT1G15100" "AT1G15110" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [85] "AT1G15430" "AT1G15520" "AT1G15670" "AT1G16300" "AT1G16850" "AT1G17380" "AT1G17420"
## [92] "AT1G17500" "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G19160"
## [99] "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19490" "AT1G19570" "AT1G19640"
## [106] "AT1G19650" "AT1G19670" "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310"
## [113] "AT1G20440" "AT1G20450" "AT1G20970" "AT1G21000" "AT1G21410" "AT1G21520" "AT1G21525"
## [120] "AT1G21550" "AT1G22220" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490" "AT1G22770"
## [127] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23850" "AT1G24090" "AT1G24145"
## [134] "AT1G24147" "AT1G24210" "AT1G24600" "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500"
## [141] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26920" "AT1G26930" "AT1G26960"
## [148] "AT1G27110" "AT1G27300" "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050"
## [155] "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29050" "AT1G29195" "AT1G29290" "AT1G29330"
## [162] "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320"
## [169] "AT1G30620" "AT1G30814" "AT1G30850" "AT1G31120" "AT1G31290" "AT1G31550" "AT1G31900"
## [176] "AT1G32560" "AT1G32640" "AT1G32730" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33110"
## [183] "AT1G33260" "AT1G34180" "AT1G34420" "AT1G35210" "AT1G42980" "AT1G43160" "AT1G43245"
## [190] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G45145" "AT1G47510" "AT1G48000"
## [197] "AT1G48100" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G49050" "AT1G49450" "AT1G49520"
## [204] "AT1G50260" "AT1G50640" "AT1G51140" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G52030"
## [211] "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52760" "AT1G52770"
## [218] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53320" "AT1G53470" "AT1G53560"
## [225] "AT1G53620" "AT1G53625" "AT1G53760" "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100"
## [232] "AT1G54120" "AT1G54130" "AT1G54570" "AT1G54890" "AT1G55610" "AT1G56580" "AT1G57560"
## [239] "AT1G57610" "AT1G57630" "AT1G57650" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740"
## [246] "AT1G59950" "AT1G60190" "AT1G60270" "AT1G61065" "AT1G61110" "AT1G61120" "AT1G61140"
## [253] "AT1G61215" "AT1G61255" "AT1G61260" "AT1G61340" "AT1G61610" "AT1G61640" "AT1G61890"
## [260] "AT1G62840" "AT1G63245" "AT1G63720" "AT1G64380" "AT1G64610" "AT1G64620" "AT1G64660"
## [267] "AT1G64670" "AT1G65610" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66550" "AT1G66590"
## [274] "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G67070" "AT1G67420" "AT1G68200"
## [281] "AT1G68250" "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68620" "AT1G69260"
## [288] "AT1G69360" "AT1G69480" "AT1G69600" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69870"
## [295] "AT1G69930" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [302] "AT1G70800" "AT1G70810" "AT1G71100" "AT1G71690" "AT1G71697" "AT1G72120" "AT1G72210"
## [309] "AT1G72240" "AT1G72330" "AT1G72450" "AT1G72520" "AT1G72680" "AT1G72690" "AT1G72700"
## [316] "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010"
## [323] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73965"
## [330] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74710" "AT1G74950" "AT1G75020" "AT1G75220"
## [337] "AT1G75370" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580" "AT1G76040" "AT1G76062"
## [344] "AT1G76070" "AT1G76180" "AT1G76240" "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650"
## [351] "AT1G76760" "AT1G76790" "AT1G76980" "AT1G77200" "AT1G77280" "AT1G77450" "AT1G77500"
## [358] "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890" "AT1G78070" "AT1G78080" "AT1G78190"
## [365] "AT1G78210" "AT1G78380" "AT1G78570" "AT1G78940" "AT1G79170" "AT1G79270" "AT1G79400"
## [372] "AT1G79520" "AT1G79570" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [379] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80820" "AT1G80840" "AT1G80850" "AT2G01340"
## [386] "AT2G01450" "AT2G01890" "AT2G02310" "AT2G02340" "AT2G02870" "AT2G03470" "AT2G03760"
## [393] "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450" "AT2G05260" "AT2G05940" "AT2G06050"
## [400] "AT2G06255" "AT2G13650" "AT2G13960" "AT2G14290" "AT2G15760" "AT2G16720" "AT2G17500"
## [407] "AT2G17720" "AT2G18090" "AT2G18196" "AT2G18690" "AT2G18917" "AT2G20110" "AT2G20142"
## [414] "AT2G20825" "AT2G20880" "AT2G21188" "AT2G21350" "AT2G21640" "AT2G21780" "AT2G22200"
## [421] "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22860" "AT2G23030" "AT2G23110"
## [428] "AT2G23340" "AT2G23450" "AT2G23760" "AT2G23810" "AT2G24210" "AT2G24285" "AT2G24850"
## [435] "AT2G25130" "AT2G25240" "AT2G25460" "AT2G25625" "AT2G26480" "AT2G26530" "AT2G27310"
## [442] "AT2G27500" "AT2G27505" "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28200" "AT2G28400"
## [449] "AT2G28570" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470" "AT2G29670" "AT2G30020"
## [456] "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395" "AT2G30400" "AT2G30540"
## [463] "AT2G30550" "AT2G30720" "AT2G30750" "AT2G30820" "AT2G30830" "AT2G31180" "AT2G31380"
## [470] "AT2G31940" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32210" "AT2G32235"
## [477] "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33380" "AT2G34010" "AT2G34070"
## [484] "AT2G34080" "AT2G34500" "AT2G34600" "AT2G34810" "AT2G35290" "AT2G35550" "AT2G35700"
## [491] "AT2G35710" "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36080" "AT2G36380"
## [498] "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854" "AT2G37040" "AT2G37170"
## [505] "AT2G37180" "AT2G37440" "AT2G37590" "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870"
## [512] "AT2G37980" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530"
## [519] "AT2G38640" "AT2G38750" "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39210" "AT2G39250"
## [526] "AT2G39350" "AT2G39520" "AT2G39725" "AT2G39800" "AT2G39980" "AT2G40140" "AT2G40340"
## [533] "AT2G40435" "AT2G40620" "AT2G40750" "AT2G41070" "AT2G41410" "AT2G41540" "AT2G41660"
## [540] "AT2G41730" "AT2G41835" "AT2G41870" "AT2G42150" "AT2G42350" "AT2G42530" "AT2G42540"
## [547] "AT2G42560" "AT2G42760" "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43320" "AT2G43535"
## [554] "AT2G43550" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44810" "AT2G44840" "AT2G44940"
## [561] "AT2G45210" "AT2G45760" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [568] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [575] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47560" "AT2G47670" "AT2G47770"
## [582] "AT2G47780" "AT2G47950" "AT3G01280" "AT3G01290" "AT3G01830" "AT3G01840" "AT3G02140"
## [589] "AT3G02150" "AT3G02160" "AT3G02510" "AT3G02875" "AT3G02990" "AT3G03310" "AT3G03440"
## [596] "AT3G03650" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060" "AT3G04181" "AT3G04420"
## [603] "AT3G04630" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05800"
## [610] "AT3G05810" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06420" "AT3G06490" "AT3G06500"
## [617] "AT3G06890" "AT3G07340" "AT3G07350" "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720"
## [624] "AT3G08990" "AT3G09032" "AT3G09280" "AT3G09370" "AT3G09450" "AT3G09830" "AT3G09910"
## [631] "AT3G09940" "AT3G10815" "AT3G10985" "AT3G11150" "AT3G11170" "AT3G11210" "AT3G11330"
## [638] "AT3G11340" "AT3G11410" "AT3G11420" "AT3G11450" "AT3G11470" "AT3G11480" "AT3G11580"
## [645] "AT3G11840" "AT3G12320" "AT3G12830" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13432"
## [652] "AT3G13610" "AT3G13730" "AT3G13910" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14560"
## [659] "AT3G14840" "AT3G14870" "AT3G15210" "AT3G15500" "AT3G15534" "AT3G15760" "AT3G15990"
## [666] "AT3G16150" "AT3G16320" "AT3G16330" "AT3G16400" "AT3G16450" "AT3G16460" "AT3G16500"
## [673] "AT3G16620" "AT3G16990" "AT3G17000" "AT3G17120" "AT3G17380" "AT3G17510" "AT3G17520"
## [680] "AT3G17609" "AT3G17690" "AT3G17800" "AT3G17810" "AT3G17860" "AT3G17910" "AT3G18295"
## [687] "AT3G18560" "AT3G19270" "AT3G19580" "AT3G19970" "AT3G21080" "AT3G21230" "AT3G21660"
## [694] "AT3G21670" "AT3G21700" "AT3G21890" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G22370"
## [701] "AT3G22415" "AT3G22550" "AT3G22560" "AT3G22660" "AT3G22890" "AT3G22910" "AT3G24420"
## [708] "AT3G24518" "AT3G24520" "AT3G25250" "AT3G25570" "AT3G25572" "AT3G25760" "AT3G25770"
## [715] "AT3G25780" "AT3G25870" "AT3G25882" "AT3G25890" "AT3G25910" "AT3G26460" "AT3G26690"
## [722] "AT3G26830" "AT3G26840" "AT3G27170" "AT3G27210" "AT3G27415" "AT3G27416" "AT3G27809"
## [729] "AT3G27810" "AT3G27870" "AT3G27960" "AT3G28007" "AT3G28210" "AT3G28220" "AT3G28580"
## [736] "AT3G28600" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G30380" "AT3G41979" "AT3G43250"
## [743] "AT3G43270" "AT3G43440" "AT3G44326" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [750] "AT3G44870" "AT3G45040" "AT3G45130" "AT3G45140" "AT3G45638" "AT3G46080" "AT3G46510"
## [757] "AT3G46640" "AT3G46650" "AT3G46658" "AT3G46660" "AT3G46668" "AT3G46670" "AT3G46690"
## [764] "AT3G47340" "AT3G47420" "AT3G47500" "AT3G47540" "AT3G47730" "AT3G47750" "AT3G47960"
## [771] "AT3G48080" "AT3G48240" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520"
## [778] "AT3G48530" "AT3G48660" "AT3G48870" "AT3G49400" "AT3G49870" "AT3G50260" "AT3G50310"
## [785] "AT3G50410" "AT3G50470" "AT3G50570" "AT3G50620" "AT3G50650" "AT3G50760" "AT3G50770"
## [792] "AT3G50800" "AT3G50910" "AT3G50930" "AT3G50970" "AT3G51090" "AT3G51450" "AT3G52100"
## [799] "AT3G52290" "AT3G52310" "AT3G52430" "AT3G52470" "AT3G52540" "AT3G52740" "AT3G52770"
## [806] "AT3G52870" "AT3G53230" "AT3G53232" "AT3G53600" "AT3G54320" "AT3G54820" "AT3G54950"
## [813] "AT3G55060" "AT3G55110" "AT3G55290" "AT3G55500" "AT3G55640" "AT3G55880" "AT3G55970"
## [820] "AT3G56260" "AT3G56275" "AT3G56400" "AT3G56620" "AT3G56710" "AT3G56891" "AT3G57010"
## [827] "AT3G57020" "AT3G57157" "AT3G57380" "AT3G57450" "AT3G57460" "AT3G57480" "AT3G57520"
## [834] "AT3G57540" "AT3G57760" "AT3G57880" "AT3G57950" "AT3G58795" "AT3G59050" "AT3G59052"
## [841] "AT3G59710" "AT3G59800" "AT3G59900" "AT3G59940" "AT3G60160" "AT3G60180" "AT3G60420"
## [848] "AT3G60450" "AT3G60490" "AT3G60961" "AT3G60966" "AT3G61113" "AT3G61185" "AT3G61190"
## [855] "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61630" "AT3G61890" "AT3G61900"
## [862] "AT3G61920" "AT3G61930" "AT3G62760" "AT3G63010" "AT3G63060" "AT3G63380" "AT4G00430"
## [869] "AT4G01026" "AT4G01030" "AT4G01360" "AT4G01535" "AT4G01540" "AT4G01850" "AT4G01895"
## [876] "AT4G02220" "AT4G02320" "AT4G02360" "AT4G02380" "AT4G02850" "AT4G03320" "AT4G04223"
## [883] "AT4G05010" "AT4G05020" "AT4G05030" "AT4G05100" "AT4G05497" "AT4G06534" "AT4G06744"
## [890] "AT4G07950" "AT4G08170" "AT4G08555" "AT4G08870" "AT4G09460" "AT4G10290" "AT4G10390"
## [897] "AT4G11140" "AT4G11690" "AT4G11890" "AT4G11911" "AT4G12000" "AT4G12005" "AT4G12040"
## [904] "AT4G12410" "AT4G12710" "AT4G12720" "AT4G12735" "AT4G13110" "AT4G13860" "AT4G14365"
## [911] "AT4G15100" "AT4G15200" "AT4G15230" "AT4G15248" "AT4G15280" "AT4G15660" "AT4G15670"
## [918] "AT4G15680" "AT4G15690" "AT4G15700" "AT4G15770" "AT4G15940" "AT4G15990" "AT4G16000"
## [925] "AT4G16680" "AT4G16690" "AT4G16730" "AT4G16740" "AT4G16760" "AT4G16820" "AT4G17230"
## [932] "AT4G17240" "AT4G18160" "AT4G18170" "AT4G18360" "AT4G18440" "AT4G18950" "AT4G20830"
## [939] "AT4G20970" "AT4G21060" "AT4G21120" "AT4G21200" "AT4G21215" "AT4G21390" "AT4G21440"
## [946] "AT4G21570" "AT4G21680" "AT4G21780" "AT4G21790" "AT4G21830" "AT4G21850" "AT4G22070"
## [953] "AT4G22590" "AT4G22592" "AT4G22620" "AT4G22758" "AT4G23050" "AT4G23060" "AT4G23420"
## [960] "AT4G23450" "AT4G23600" "AT4G23680" "AT4G24010" "AT4G24026" "AT4G24030" "AT4G24040"
## [967] "AT4G24110" "AT4G24340" "AT4G24380" "AT4G24960" "AT4G25390" "AT4G25433" "AT4G25480"
## [974] "AT4G25670" "AT4G25672" "AT4G25690" "AT4G25692" "AT4G26060" "AT4G26070" "AT4G26080"
## [981] "AT4G26120" "AT4G26470" "AT4G26810" "AT4G27140" "AT4G27350" "AT4G27410" "AT4G27530"
## [988] "AT4G27590" "AT4G27830" "AT4G27860" "AT4G27870" "AT4G28085" "AT4G28088" "AT4G28140"
## [995] "AT4G28150" "AT4G28290" "AT4G28300" "AT4G29740" "AT4G29930" "AT4G29950"
## [ reached getOption("max.print") -- omitted 430 entries ]
##
## $`A12-V12_down`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" "AT1G01610" "AT1G01620" "AT1G01720"
## [8] "AT1G01900" "AT1G02205" "AT1G02400" "AT1G02405" "AT1G02460" "AT1G03020" "AT1G04220"
## [15] "AT1G07150" "AT1G07610" "AT1G08200" "AT1G09530" "AT1G09950" "AT1G10370" "AT1G10530"
## [22] "AT1G10560" "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12420" "AT1G13740"
## [29] "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G15080" "AT1G15100" "AT1G15170"
## [36] "AT1G15180" "AT1G15670" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17420" "AT1G17940"
## [43] "AT1G19570" "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030"
## [50] "AT1G20070" "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G22550" "AT1G22770"
## [57] "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27030" "AT1G27640" "AT1G27730" "AT1G28010" "AT1G28050" "AT1G28360" "AT1G29330"
## [71] "AT1G30240" "AT1G31710" "AT1G32860" "AT1G32910" "AT1G34210" "AT1G43160" "AT1G44350"
## [78] "AT1G48100" "AT1G49450" "AT1G49650" "AT1G50640" "AT1G51090" "AT1G51500" "AT1G51780"
## [85] "AT1G52030" "AT1G52720" "AT1G53170" "AT1G54010" "AT1G54030" "AT1G54040" "AT1G54095"
## [92] "AT1G55260" "AT1G55490" "AT1G56580" "AT1G58270" "AT1G59740" "AT1G60190" "AT1G60270"
## [99] "AT1G61110" "AT1G61340" "AT1G62440" "AT1G62975" "AT1G63040" "AT1G64150" "AT1G64380"
## [106] "AT1G64390" "AT1G64620" "AT1G64670" "AT1G65860" "AT1G66280" "AT1G67420" "AT1G68350"
## [113] "AT1G68500" "AT1G69140" "AT1G69295" "AT1G69530" "AT1G69600" "AT1G69870" "AT1G70300"
## [120] "AT1G70640" "AT1G70700" "AT1G72040" "AT1G72140" "AT1G72180" "AT1G73210" "AT1G73390"
## [127] "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74950" "AT1G75370" "AT1G75580"
## [134] "AT1G75800" "AT1G76610" "AT1G76790" "AT1G77680" "AT1G78060" "AT1G78070" "AT1G78080"
## [141] "AT1G79170" "AT1G79570" "AT1G80060" "AT1G80120" "AT1G80530" "AT1G80580" "AT1G80820"
## [148] "AT1G80840" "AT1G80850" "AT2G01830" "AT2G01890" "AT2G03760" "AT2G04080" "AT2G06050"
## [155] "AT2G06255" "AT2G16630" "AT2G17450" "AT2G18969" "AT2G18970" "AT2G20880" "AT2G21140"
## [162] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23340" "AT2G23760"
## [169] "AT2G24210" "AT2G25130" "AT2G27510" "AT2G27820" "AT2G27830" "AT2G28790" "AT2G29440"
## [176] "AT2G29450" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G30040" "AT2G30360" "AT2G30362"
## [183] "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31380" "AT2G32235" "AT2G32240" "AT2G32510"
## [190] "AT2G32990" "AT2G33380" "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960"
## [197] "AT2G36380" "AT2G36590" "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885"
## [204] "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G38530"
## [211] "AT2G38540" "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39980" "AT2G40620"
## [218] "AT2G41170" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [225] "AT2G43018" "AT2G43020" "AT2G43535" "AT2G43550" "AT2G44578" "AT2G44640" "AT2G44840"
## [232] "AT2G45470" "AT2G45960" "AT2G46370" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [239] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G03190" "AT3G03780"
## [246] "AT3G03980" "AT3G04000" "AT3G04010" "AT3G04630" "AT3G05640" "AT3G05800" "AT3G05810"
## [253] "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G08030" "AT3G08670"
## [260] "AT3G09032" "AT3G09940" "AT3G10985" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [267] "AT3G12120" "AT3G12145" "AT3G12920" "AT3G13230" "AT3G14067" "AT3G14870" "AT3G15210"
## [274] "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450" "AT3G16460" "AT3G16500"
## [281] "AT3G17120" "AT3G17510" "AT3G17860" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G21670"
## [288] "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22560" "AT3G23810" "AT3G24518" "AT3G24520"
## [295] "AT3G25700" "AT3G25760" "AT3G25770" "AT3G25780" "AT3G26060" "AT3G26520" "AT3G27170"
## [302] "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28600" "AT3G43250" "AT3G43270" "AT3G44870"
## [309] "AT3G45140" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47960" "AT3G48350"
## [316] "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520" "AT3G48720" "AT3G49870" "AT3G50260"
## [323] "AT3G50410" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G52290" "AT3G53370" "AT3G53420"
## [330] "AT3G54820" "AT3G54830" "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260"
## [337] "AT3G56270" "AT3G57020" "AT3G57157" "AT3G57760" "AT3G59050" "AT3G59052" "AT3G59710"
## [344] "AT3G59940" "AT3G59970" "AT3G60220" "AT3G60490" "AT3G61420" "AT3G61430" "AT3G61490"
## [351] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62700" "AT3G62860" "AT3G63200" "AT4G00360"
## [358] "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030" "AT4G02360" "AT4G04840" "AT4G05010"
## [365] "AT4G05020" "AT4G05100" "AT4G06534" "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08870"
## [372] "AT4G10290" "AT4G10390" "AT4G11320" "AT4G12000" "AT4G12005" "AT4G12030" "AT4G12410"
## [379] "AT4G13770" "AT4G13860" "AT4G14040" "AT4G14440" "AT4G15100" "AT4G15210" "AT4G15770"
## [386] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G18440"
## [393] "AT4G21060" "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21780" "AT4G21790" "AT4G22010"
## [400] "AT4G22620" "AT4G23060" "AT4G23420" "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960"
## [407] "AT4G24972" "AT4G25433" "AT4G25700" "AT4G25830" "AT4G26700" "AT4G27350" "AT4G27410"
## [414] "AT4G27520" "AT4G27590" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G29740" "AT4G30180"
## [421] "AT4G30210" "AT4G30440" "AT4G30530" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780"
## [428] "AT4G32785" "AT4G33220" "AT4G33467" "AT4G33970" "AT4G34200" "AT4G34290" "AT4G34650"
## [435] "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320" "AT4G35480" "AT4G35550" "AT4G35560"
## [442] "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36780" "AT4G36900" "AT4G37409" "AT4G37410"
## [449] "AT4G37760" "AT4G37990" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810" "AT4G39330"
## [456] "AT4G39350" "AT4G39980" "AT5G01210" "AT5G01215" "AT5G01760" "AT5G01840" "AT5G02170"
## [463] "AT5G02460" "AT5G03030" "AT5G04200" "AT5G04250" "AT5G04530" "AT5G04770" "AT5G05440"
## [470] "AT5G06570" "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07690" "AT5G07700" "AT5G08640"
## [477] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10720" "AT5G12860" "AT5G13220" "AT5G13400"
## [484] "AT5G14200" "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240"
## [491] "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17460" "AT5G17490" "AT5G17520"
## [498] "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20740" "AT5G21280" "AT5G22500"
## [505] "AT5G22740" "AT5G23010" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155"
## [512] "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780" "AT5G24920" "AT5G26260"
## [519] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G38005" "AT5G38120" "AT5G38130" "AT5G39320"
## [526] "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G41120" "AT5G41315" "AT5G41590"
## [533] "AT5G41600" "AT5G42650" "AT5G42900" "AT5G43170" "AT5G44050" "AT5G44210" "AT5G44420"
## [540] "AT5G45950" "AT5G47240" "AT5G47330" "AT5G52050" "AT5G52310" "AT5G52882" "AT5G53200"
## [547] "AT5G53760" "AT5G54300" "AT5G55090" "AT5G55180" "AT5G55530" "AT5G56760" "AT5G56880"
## [554] "AT5G57100" "AT5G57260" "AT5G57800" "AT5G58480" "AT5G58900" "AT5G59030" "AT5G59050"
## [561] "AT5G59080" "AT5G59090" "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59760" "AT5G60850"
## [568] "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [575] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63450" "AT5G64170"
## [582] "AT5G64260" "AT5G64280" "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280"
## [589] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66590" "AT5G66650" "AT5G67070" "AT5G67180"
## [596] "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"DEGlist <- c(up_down, up, down)
str(DEGlist) # now list of 27## List of 27
## $ M1-A1_up_down : chr [1:24] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## $ M1-V1_up_down : chr [1:1059] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## $ A1-V1_up_down : chr [1:50] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" ...
## $ M6-A6_up_down : chr [1:2373] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" ...
## $ M6-V6_up_down : chr [1:1311] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" ...
## $ A6-V6_up_down : chr [1:539] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## $ M12-A12_up_down: chr [1:3203] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" ...
## $ M12-V12_up_down: chr [1:2228] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" ...
## $ A12-V12_up_down: chr [1:988] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" ...
## $ M1-A1_up : chr [1:2] "AT3G21870" "ATCG01310"
## $ M1-V1_up : chr [1:615] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## $ A1-V1_up : chr [1:29] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" ...
## $ M6-A6_up : chr [1:1030] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" ...
## $ M6-V6_up : chr [1:739] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" ...
## $ A6-V6_up : chr [1:392] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## $ M12-A12_up : chr [1:1391] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" ...
## $ M12-V12_up : chr [1:798] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" ...
## $ A12-V12_up : chr [1:388] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" ...
## $ M1-A1_down : chr [1:22] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## $ M1-V1_down : chr [1:444] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" ...
## $ A1-V1_down : chr [1:21] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" ...
## $ M6-A6_down : chr [1:1343] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" ...
## $ M6-V6_down : chr [1:572] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" ...
## $ A6-V6_down : chr [1:147] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" ...
## $ M12-A12_down : chr [1:1812] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" ...
## $ M12-V12_down : chr [1:1430] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" ...
## $ A12-V12_down : chr [1:600] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" ...DEGlist## $`M1-A1_up_down`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT3G21870" "AT4G12480" "AT4G18540" "AT4G23550"
## [17] "AT4G33980" "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100" "ATCG01310"
##
## $`M1-V1_up_down`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G01640" "AT1G02710" "AT1G02820" "AT1G02920" "AT1G02930" "AT1G03050" "AT1G03055"
## [15] "AT1G03300" "AT1G03360" "AT1G03905" "AT1G04220" "AT1G04250" "AT1G04280" "AT1G04530"
## [22] "AT1G04550" "AT1G04620" "AT1G04660" "AT1G04770" "AT1G04990" "AT1G05020" "AT1G05300"
## [29] "AT1G05560" "AT1G05562" "AT1G05680" "AT1G05710" "AT1G06460" "AT1G07010" "AT1G07040"
## [36] "AT1G07050" "AT1G07160" "AT1G07180" "AT1G07420" "AT1G07485" "AT1G07490" "AT1G08610"
## [43] "AT1G08980" "AT1G09180" "AT1G09820" "AT1G09900" "AT1G10040" "AT1G10070" "AT1G10200"
## [50] "AT1G10460" "AT1G10710" "AT1G10960" "AT1G10990" "AT1G11200" "AT1G11362" "AT1G11925"
## [57] "AT1G11950" "AT1G12330" "AT1G12370" "AT1G12710" "AT1G12730" "AT1G13030" "AT1G13080"
## [64] "AT1G13110" "AT1G13270" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150"
## [71] "AT1G14170" "AT1G14345" "AT1G14540" "AT1G14840" "AT1G14870" "AT1G15125" "AT1G15290"
## [78] "AT1G15510" "AT1G15550" "AT1G15670" "AT1G15870" "AT1G15890" "AT1G16090" "AT1G16350"
## [85] "AT1G16390" "AT1G16730" "AT1G17050" "AT1G17665" "AT1G18800" "AT1G19130" "AT1G19140"
## [92] "AT1G19150" "AT1G19370" "AT1G19450" "AT1G19700" "AT1G20010" "AT1G20620" "AT1G20630"
## [99] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G21500" "AT1G22180"
## [106] "AT1G22370" "AT1G22480" "AT1G22490" "AT1G22590" "AT1G22770" "AT1G22850" "AT1G23100"
## [113] "AT1G23410" "AT1G23740" "AT1G24148" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26220"
## [120] "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26420" "AT1G26665" "AT1G26761" "AT1G27020"
## [127] "AT1G27120" "AT1G27480" "AT1G27630" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G29160"
## [134] "AT1G29600" "AT1G29660" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700"
## [141] "AT1G30755" "AT1G30960" "AT1G31690" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760"
## [148] "AT1G32900" "AT1G33030" "AT1G33170" "AT1G33410" "AT1G34380" "AT1G42550" "AT1G42970"
## [155] "AT1G44000" "AT1G44446" "AT1G48100" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48480"
## [162] "AT1G48570" "AT1G48605" "AT1G49010" "AT1G49230" "AT1G49430" "AT1G49490" "AT1G49660"
## [169] "AT1G49720" "AT1G50840" "AT1G51080" "AT1G51100" "AT1G51310" "AT1G51610" "AT1G51620"
## [176] "AT1G51850" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52200" "AT1G52830" "AT1G53035"
## [183] "AT1G53090" "AT1G53100" "AT1G53625" "AT1G54500" "AT1G55260" "AT1G55450" "AT1G55960"
## [190] "AT1G56140" "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G58520"
## [197] "AT1G59700" "AT1G59950" "AT1G60730" "AT1G61300" "AT1G61360" "AT1G61420" "AT1G61550"
## [204] "AT1G61560" "AT1G62170" "AT1G62180" "AT1G62630" "AT1G62720" "AT1G62750" "AT1G62760"
## [211] "AT1G62960" "AT1G63180" "AT1G63250" "AT1G64110" "AT1G64220" "AT1G64500" "AT1G64600"
## [218] "AT1G64670" "AT1G64680" "AT1G64760" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [225] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65820" "AT1G65920"
## [232] "AT1G66130" "AT1G66330" "AT1G66540" "AT1G66700" "AT1G66725" "AT1G66780" "AT1G66840"
## [239] "AT1G67370" "AT1G67590" "AT1G67750" "AT1G67970" "AT1G67980" "AT1G68050" "AT1G68440"
## [246] "AT1G69200" "AT1G69520" "AT1G70000" "AT1G70220" "AT1G70250" "AT1G70580" "AT1G70800"
## [253] "AT1G71000" "AT1G71400" "AT1G71520" "AT1G71850" "AT1G72040" "AT1G72270" "AT1G72330"
## [260] "AT1G72416" "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870"
## [267] "AT1G73890" "AT1G74010" "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280"
## [274] "AT1G75830" "AT1G76240" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77580" "AT1G77810"
## [281] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G79440" "AT1G79460"
## [288] "AT1G79680" "AT1G80270" "AT1G80760" "AT2G01280" "AT2G01540" "AT2G01890" "AT2G02010"
## [295] "AT2G02100" "AT2G02150" "AT2G02220" "AT2G02230" "AT2G02410" "AT2G02930" "AT2G03550"
## [302] "AT2G04030" "AT2G04039" "AT2G04790" "AT2G05160" "AT2G05630" "AT2G05753" "AT2G11890"
## [309] "AT2G14170" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G15890" "AT2G16365" "AT2G17740"
## [316] "AT2G17972" "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19190" "AT2G19450" "AT2G19670"
## [323] "AT2G20020" "AT2G20585" "AT2G21130" "AT2G21185" "AT2G21187" "AT2G21320" "AT2G21330"
## [330] "AT2G21660" "AT2G22240" "AT2G22450" "AT2G22970" "AT2G22980" "AT2G23030" "AT2G23110"
## [337] "AT2G23290" "AT2G23340" "AT2G23430" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440"
## [344] "AT2G24540" "AT2G24545" "AT2G24570" "AT2G24580" "AT2G24645" "AT2G24762" "AT2G24820"
## [351] "AT2G25530" "AT2G25680" "AT2G25730" "AT2G25930" "AT2G26080" "AT2G26560" "AT2G26650"
## [358] "AT2G26692" "AT2G27200" "AT2G27420" "AT2G28190" "AT2G28790" "AT2G28930" "AT2G29090"
## [365] "AT2G29720" "AT2G29740" "AT2G30100" "AT2G30150" "AT2G30395" "AT2G30424" "AT2G30520"
## [372] "AT2G30750" "AT2G30760" "AT2G30770" "AT2G31010" "AT2G31380" "AT2G31750" "AT2G31751"
## [379] "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33830" "AT2G33855" "AT2G35760"
## [386] "AT2G35950" "AT2G35980" "AT2G36000" "AT2G36390" "AT2G36590" "AT2G36750" "AT2G36800"
## [393] "AT2G36815" "AT2G37240" "AT2G37430" "AT2G37460" "AT2G37630" "AT2G37940" "AT2G37970"
## [400] "AT2G38465" "AT2G38750" "AT2G38760" "AT2G38860" "AT2G39200" "AT2G39380" "AT2G39400"
## [407] "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39730" "AT2G39900" "AT2G39920"
## [414] "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G41050" "AT2G41250" "AT2G41290"
## [421] "AT2G41660" "AT2G42360" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43590" "AT2G43620"
## [428] "AT2G43650" "AT2G43710" "AT2G43940" "AT2G44080" "AT2G45340" "AT2G46670" "AT2G46790"
## [435] "AT2G46810" "AT2G46830" "AT2G46940" "AT2G47370" "AT2G47390" "AT2G47450" "AT2G47485"
## [442] "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180" "AT3G01440" "AT3G02800"
## [449] "AT3G02830" "AT3G04140" "AT3G04420" "AT3G04950" "AT3G05390" "AT3G06145" "AT3G06520"
## [456] "AT3G06750" "AT3G06920" "AT3G07310" "AT3G07640" "AT3G07650" "AT3G07750" "AT3G07770"
## [463] "AT3G09160" "AT3G09162" "AT3G09190" "AT3G09390" "AT3G09405" "AT3G09600" "AT3G09650"
## [470] "AT3G10040" "AT3G10110" "AT3G10410" "AT3G10525" "AT3G11020" "AT3G11090" "AT3G11110"
## [477] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G12320" "AT3G13450" "AT3G13470"
## [484] "AT3G13700" "AT3G13710" "AT3G14360" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15356"
## [491] "AT3G15518" "AT3G15540" "AT3G15620" "AT3G15850" "AT3G15990" "AT3G16180" "AT3G16360"
## [498] "AT3G16520" "AT3G16530" "AT3G16565" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840"
## [505] "AT3G18080" "AT3G18750" "AT3G19000" "AT3G19210" "AT3G19260" "AT3G19440" "AT3G19450"
## [512] "AT3G19480" "AT3G19615" "AT3G20410" "AT3G21240" "AT3G21390" "AT3G21460" "AT3G21470"
## [519] "AT3G21890" "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G22460" "AT3G23090"
## [526] "AT3G23210" "AT3G23280" "AT3G23510" "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190"
## [533] "AT3G24460" "AT3G25030" "AT3G25670" "AT3G26500" "AT3G26570" "AT3G26670" "AT3G26680"
## [540] "AT3G26740" "AT3G26830" "AT3G27210" "AT3G27300" "AT3G27350" "AT3G27415" "AT3G27416"
## [547] "AT3G28040" "AT3G28370" "AT3G28540" "AT3G30460" "AT3G30720" "AT3G43670" "AT3G43790"
## [554] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46090"
## [561] "AT3G46440" "AT3G46640" "AT3G46690" "AT3G46900" "AT3G47070" "AT3G47360" "AT3G47420"
## [568] "AT3G47430" "AT3G47800" "AT3G47860" "AT3G48280" "AT3G48490" "AT3G48560" "AT3G48660"
## [575] "AT3G48690" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G49240" "AT3G49470" "AT3G49570"
## [582] "AT3G50120" "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50685" "AT3G50810" "AT3G51330"
## [589] "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52450" "AT3G52720" "AT3G52920" "AT3G53700"
## [596] "AT3G53830" "AT3G53920" "AT3G54150" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [603] "AT3G54720" "AT3G54900" "AT3G55150" "AT3G55450" "AT3G56080" "AT3G56160" "AT3G56290"
## [610] "AT3G56300" "AT3G56330" "AT3G56500" "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180"
## [617] "AT3G57190" "AT3G57400" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G58840" "AT3G58990"
## [624] "AT3G59220" "AT3G59250" "AT3G59330" "AT3G59350" "AT3G59400" "AT3G59700" "AT3G59900"
## [631] "AT3G61160" "AT3G61220" "AT3G61780" "AT3G61880" "AT3G62150" "AT3G63160" "AT3G63200"
## [638] "AT3G63380" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [645] "AT4G01080" "AT4G01130" "AT4G01250" "AT4G01535" "AT4G01750" "AT4G02380" "AT4G02520"
## [652] "AT4G02630" "AT4G02990" "AT4G03460" "AT4G03600" "AT4G04020" "AT4G04330" "AT4G04610"
## [659] "AT4G05110" "AT4G09020" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620"
## [666] "AT4G11100" "AT4G11175" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12390" "AT4G12470"
## [673] "AT4G12480" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14270" "AT4G14440"
## [680] "AT4G14690" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550"
## [687] "AT4G15810" "AT4G16140" "AT4G16146" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16820"
## [694] "AT4G16980" "AT4G17140" "AT4G17180" "AT4G17680" "AT4G17880" "AT4G17970" "AT4G18430"
## [701] "AT4G18540" "AT4G18800" "AT4G19120" "AT4G19170" "AT4G19390" "AT4G19410" "AT4G19810"
## [708] "AT4G19880" "AT4G20000" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990" "AT4G22710"
## [715] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23680" "AT4G23770" "AT4G23810" "AT4G24540"
## [722] "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780" "AT4G25810" "AT4G25900" "AT4G26270"
## [729] "AT4G26600" "AT4G26670" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27130" "AT4G27700"
## [736] "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G28660" "AT4G28700" "AT4G28730"
## [743] "AT4G28740" "AT4G28780" "AT4G29600" "AT4G30470" "AT4G30610" "AT4G30690" "AT4G30960"
## [750] "AT4G31050" "AT4G31210" "AT4G31390" "AT4G31550" "AT4G31620" "AT4G31870" "AT4G32340"
## [757] "AT4G32770" "AT4G33010" "AT4G33160" "AT4G33560" "AT4G33980" "AT4G33985" "AT4G34550"
## [764] "AT4G34580" "AT4G34610" "AT4G34630" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990"
## [771] "AT4G35090" "AT4G35180" "AT4G35380" "AT4G36580" "AT4G36760" "AT4G36770" "AT4G36950"
## [778] "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37650" "AT4G37800" "AT4G37925"
## [785] "AT4G38000" "AT4G38060" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G38680" "AT4G38960"
## [792] "AT4G38970" "AT4G39230" "AT4G39270" "AT4G39330" "AT4G39470" "AT4G39510" "AT4G39800"
## [799] "AT4G40070" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [806] "AT5G02160" "AT5G02180" "AT5G02230" "AT5G02260" "AT5G02540" "AT5G02780" "AT5G02830"
## [813] "AT5G02950" "AT5G03460" "AT5G03555" "AT5G03760" "AT5G05190" "AT5G05270" "AT5G05410"
## [820] "AT5G05580" "AT5G06550" "AT5G06690" "AT5G06790" "AT5G08380" "AT5G08490" "AT5G08610"
## [827] "AT5G08720" "AT5G08760" "AT5G09500" "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470"
## [834] "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G11210" "AT5G11670" "AT5G12080"
## [841] "AT5G12110" "AT5G12880" "AT5G12930" "AT5G13400" "AT5G13730" "AT5G13770" "AT5G13920"
## [848] "AT5G14350" "AT5G14560" "AT5G14580" "AT5G14610" "AT5G14740" "AT5G15030" "AT5G15600"
## [855] "AT5G15640" "AT5G15840" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340"
## [862] "AT5G16380" "AT5G16530" "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18470" "AT5G18525"
## [869] "AT5G18540" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300" "AT5G19730" "AT5G19850"
## [876] "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380" "AT5G20950" "AT5G21100"
## [883] "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23235" "AT5G23240" "AT5G23575" "AT5G23660"
## [890] "AT5G23730" "AT5G23750" "AT5G23760" "AT5G24030" "AT5G24105" "AT5G24110" "AT5G24120"
## [897] "AT5G24150" "AT5G24165" "AT5G24240" "AT5G24280" "AT5G24380" "AT5G24470" "AT5G24580"
## [904] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25340" "AT5G25590"
## [911] "AT5G25630" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G28500"
## [918] "AT5G33290" "AT5G34780" "AT5G37740" "AT5G38420" "AT5G38430" "AT5G38895" "AT5G39410"
## [925] "AT5G39580" "AT5G39710" "AT5G40240" "AT5G40760" "AT5G41260" "AT5G42900" "AT5G43400"
## [932] "AT5G43630" "AT5G43850" "AT5G44010" "AT5G44190" "AT5G44380" "AT5G44480" "AT5G44490"
## [939] "AT5G44910" "AT5G45800" "AT5G46050" "AT5G46220" "AT5G46580" "AT5G46600" "AT5G46860"
## [946] "AT5G46871" "AT5G47220" "AT5G47360" "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48250"
## [953] "AT5G48430" "AT5G48850" "AT5G48910" "AT5G49015" "AT5G49100" "AT5G49740" "AT5G49900"
## [960] "AT5G50100" "AT5G50200" "AT5G51540" "AT5G51570" "AT5G51720" "AT5G51790" "AT5G52570"
## [967] "AT5G53110" "AT5G53170" "AT5G53200" "AT5G53970" "AT5G54130" "AT5G54190" "AT5G54470"
## [974] "AT5G54585" "AT5G54610" "AT5G54630" "AT5G54930" "AT5G54960" "AT5G55050" "AT5G55090"
## [981] "AT5G55530" "AT5G55570" "AT5G55730" "AT5G55740" "AT5G55790" "AT5G56580" "AT5G56850"
## [988] "AT5G56860" "AT5G56960" "AT5G57030" "AT5G57110" "AT5G57180" "AT5G57220" "AT5G57240"
## [995] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G58770" "AT5G58870"
## [ reached getOption("max.print") -- omitted 59 entries ]
##
## $`A1-V1_up_down`
## [1] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" "AT1G17665" "AT1G21500" "AT1G55260" "AT1G62170"
## [9] "AT1G62180" "AT1G64500" "AT1G68050" "AT2G21320" "AT2G24762" "AT2G25730" "AT2G40080" "AT2G46830"
## [17] "AT3G07640" "AT3G07650" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [25] "AT4G01130" "AT4G04330" "AT4G12390" "AT4G26670" "AT4G33980" "AT4G37650" "AT5G02150" "AT5G11150"
## [33] "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280" "AT5G39410" "AT5G42900"
## [41] "AT5G47610" "AT5G48250" "AT5G48570" "AT5G54610" "AT5G57110" "AT5G58770" "AT5G59570" "AT5G60100"
## [49] "AT5G61380" "AT5G62140"
##
## $`M6-A6_up_down`
## [1] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" "AT1G01390" "AT1G01430" "AT1G01480"
## [8] "AT1G01560" "AT1G01660" "AT1G01680" "AT1G01690" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450" "AT1G02470" "AT1G02500" "AT1G02520"
## [22] "AT1G02610" "AT1G02620" "AT1G02740" "AT1G02820" "AT1G02850" "AT1G02920" "AT1G02930"
## [29] "AT1G03020" "AT1G03050" "AT1G03130" "AT1G03310" "AT1G03495" "AT1G03600" "AT1G03610"
## [36] "AT1G03630" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04680"
## [43] "AT1G04770" "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05540"
## [50] "AT1G05570" "AT1G05880" "AT1G06040" "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06460"
## [57] "AT1G06620" "AT1G06680" "AT1G07000" "AT1G07050" "AT1G07280" "AT1G07430" "AT1G07440"
## [64] "AT1G07500" "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08380" "AT1G08450" "AT1G08550"
## [71] "AT1G08860" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020"
## [78] "AT1G10040" "AT1G10150" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10657" "AT1G10760"
## [85] "AT1G10960" "AT1G10990" "AT1G11130" "AT1G11180" "AT1G11260" "AT1G11290" "AT1G11330"
## [92] "AT1G11362" "AT1G11380" "AT1G11905" "AT1G11925" "AT1G12090" "AT1G12160" "AT1G12200"
## [99] "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12450" "AT1G12500" "AT1G12710" "AT1G12730"
## [106] "AT1G12900" "AT1G12940" "AT1G13245" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13470"
## [113] "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550" "AT1G13650" "AT1G13700" "AT1G13830"
## [120] "AT1G13930" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14480" "AT1G14540"
## [127] "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G15040" "AT1G15080" "AT1G15150"
## [134] "AT1G15160" "AT1G15290" "AT1G15415" "AT1G15520" "AT1G15550" "AT1G15690" "AT1G15790"
## [141] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16090"
## [148] "AT1G16150" "AT1G16300" "AT1G16400" "AT1G16410" "AT1G16420" "AT1G16670" "AT1G16720"
## [155] "AT1G16730" "AT1G17100" "AT1G17170" "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500"
## [162] "AT1G17600" "AT1G17615" "AT1G17744" "AT1G17745" "AT1G17750" "AT1G17830" "AT1G17850"
## [169] "AT1G17970" "AT1G18000" "AT1G18010" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18570"
## [176] "AT1G18890" "AT1G18910" "AT1G19020" "AT1G19150" "AT1G19250" "AT1G19450" "AT1G19510"
## [183] "AT1G19540" "AT1G19715" "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20310"
## [190] "AT1G20440" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310" "AT1G21370" "AT1G21390"
## [197] "AT1G21500" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22190"
## [204] "AT1G22220" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22400" "AT1G22403"
## [211] "AT1G22480" "AT1G22490" "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590"
## [218] "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23200" "AT1G23205"
## [225] "AT1G23390" "AT1G23400" "AT1G23480" "AT1G23710" "AT1G23740" "AT1G23840" "AT1G23850"
## [232] "AT1G24095" "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G25400"
## [239] "AT1G25450" "AT1G26130" "AT1G26150" "AT1G26230" "AT1G26380" "AT1G26390" "AT1G26410"
## [246] "AT1G26420" "AT1G26761" "AT1G26800" "AT1G27110" "AT1G27480" "AT1G27770" "AT1G27950"
## [253] "AT1G28010" "AT1G28330" "AT1G28370" "AT1G28480" "AT1G29090" "AT1G29195" "AT1G29280"
## [260] "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530"
## [267] "AT1G29600" "AT1G29640" "AT1G29670" "AT1G29680" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30190" "AT1G30270" "AT1G30420" "AT1G30520" "AT1G30620" "AT1G30814" "AT1G30850"
## [281] "AT1G30900" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330" "AT1G31880" "AT1G31920"
## [288] "AT1G32060" "AT1G32080" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950"
## [295] "AT1G32960" "AT1G33030" "AT1G33110" "AT1G33170" "AT1G33240" "AT1G33420" "AT1G33430"
## [302] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33760" "AT1G33800" "AT1G33950" "AT1G33960"
## [309] "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140" "AT1G35210" "AT1G35230" "AT1G35420"
## [316] "AT1G35710" "AT1G35910" "AT1G36370" "AT1G36622" "AT1G36675" "AT1G37130" "AT1G42550"
## [323] "AT1G42980" "AT1G43670" "AT1G43910" "AT1G44000" "AT1G44130" "AT1G44446" "AT1G45010"
## [330] "AT1G45145" "AT1G47210" "AT1G47370" "AT1G47440" "AT1G47510" "AT1G47580" "AT1G47890"
## [337] "AT1G48030" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010"
## [344] "AT1G49050" "AT1G49200" "AT1G49380" "AT1G49490" "AT1G49650" "AT1G49975" "AT1G49990"
## [351] "AT1G50040" "AT1G50290" "AT1G50400" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [358] "AT1G51640" "AT1G51645" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51805" "AT1G51850"
## [365] "AT1G51860" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52230" "AT1G52315" "AT1G52342"
## [372] "AT1G52540" "AT1G52565" "AT1G52770" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53160"
## [379] "AT1G53620" "AT1G53625" "AT1G54000" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G54960"
## [386] "AT1G55330" "AT1G55370" "AT1G55480" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [393] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G56670"
## [400] "AT1G56720" "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590"
## [407] "AT1G59865" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690" "AT1G60730" "AT1G60800"
## [414] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61300" "AT1G61340"
## [421] "AT1G61370" "AT1G61415" "AT1G61420" "AT1G61520" "AT1G61550" "AT1G61640" "AT1G61795"
## [428] "AT1G61800" "AT1G61810" "AT1G62170" "AT1G62180" "AT1G62320" "AT1G62422" "AT1G62510"
## [435] "AT1G62560" "AT1G62580" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63245" "AT1G63570"
## [442] "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G63930" "AT1G64065" "AT1G64355"
## [449] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900"
## [456] "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65590" "AT1G65690"
## [463] "AT1G65870" "AT1G66090" "AT1G66130" "AT1G66230" "AT1G66250" "AT1G66390" "AT1G66460"
## [470] "AT1G66550" "AT1G66590" "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66840" "AT1G66880"
## [477] "AT1G66930" "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67265" "AT1G67360"
## [484] "AT1G67520" "AT1G67590" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67740" "AT1G67800"
## [491] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67910" "AT1G67920" "AT1G67980" "AT1G68010"
## [498] "AT1G68050" "AT1G68110" "AT1G68190" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68520"
## [505] "AT1G68540" "AT1G68620" "AT1G68670" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G68830"
## [512] "AT1G68890" "AT1G69140" "AT1G69260" "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790"
## [519] "AT1G69840" "AT1G69890" "AT1G69930" "AT1G70090" "AT1G70140" "AT1G70170" "AT1G70290"
## [526] "AT1G70580" "AT1G70690" "AT1G70820" "AT1G70990" "AT1G71000" "AT1G71030" "AT1G71390"
## [533] "AT1G71690" "AT1G72000" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72220" "AT1G72240"
## [540] "AT1G72270" "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72540" "AT1G72600" "AT1G72610"
## [547] "AT1G72630" "AT1G72640" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770"
## [554] "AT1G72870" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010"
## [561] "AT1G73130" "AT1G73325" "AT1G73330" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750"
## [568] "AT1G73805" "AT1G73810" "AT1G73870" "AT1G73890" "AT1G73965" "AT1G74070" "AT1G74080"
## [575] "AT1G74100" "AT1G74200" "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750"
## [582] "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75040" "AT1G75060" "AT1G75170" "AT1G75250"
## [589] "AT1G75460" "AT1G75690" "AT1G75770" "AT1G75830" "AT1G75900" "AT1G75960" "AT1G76040"
## [596] "AT1G76080" "AT1G76100" "AT1G76110" "AT1G76620" "AT1G76690" "AT1G76760" "AT1G76955"
## [603] "AT1G76970" "AT1G76980" "AT1G77090" "AT1G77210" "AT1G77500" "AT1G77630" "AT1G77640"
## [610] "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78000" "AT1G78100" "AT1G78190"
## [617] "AT1G78380" "AT1G78410" "AT1G78450" "AT1G78600" "AT1G78780" "AT1G78990" "AT1G78995"
## [624] "AT1G79330" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79770" "AT1G79780" "AT1G80110"
## [631] "AT1G80280" "AT1G80300" "AT1G80440" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80630"
## [638] "AT1G80830" "AT1G80840" "AT1G80920" "AT2G01180" "AT2G01300" "AT2G01590" "AT2G01755"
## [645] "AT2G01760" "AT2G01818" "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070"
## [652] "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02710" "AT2G02930" "AT2G02950" "AT2G02990"
## [659] "AT2G03090" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03505" "AT2G03550" "AT2G03710"
## [666] "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495"
## [673] "AT2G04515" "AT2G04790" "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940"
## [680] "AT2G05995" "AT2G06520" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13360" "AT2G13790"
## [687] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G15020" "AT2G15090"
## [694] "AT2G15890" "AT2G15970" "AT2G16060" "AT2G16365" "AT2G16630" "AT2G16660" "AT2G16720"
## [701] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17230" "AT2G17440"
## [708] "AT2G17500" "AT2G17695" "AT2G17720" "AT2G17780" "AT2G18000" "AT2G18160" "AT2G18162"
## [715] "AT2G18193" "AT2G18300" "AT2G18560" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G18700"
## [722] "AT2G18940" "AT2G19190" "AT2G19310" "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20250"
## [729] "AT2G20562" "AT2G20670" "AT2G20680" "AT2G21130" "AT2G21140" "AT2G21188" "AT2G21320"
## [736] "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790"
## [743] "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22200" "AT2G22470" "AT2G22810" "AT2G22830"
## [750] "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600" "AT2G23680"
## [757] "AT2G23810" "AT2G23840" "AT2G24110" "AT2G24285" "AT2G24490" "AT2G24550" "AT2G24580"
## [764] "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25190" "AT2G25200" "AT2G25240" "AT2G25260"
## [771] "AT2G25270" "AT2G25440" "AT2G25450" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G25900"
## [778] "AT2G26080" "AT2G26170" "AT2G26300" "AT2G26390" "AT2G26400" "AT2G26480" "AT2G26710"
## [785] "AT2G26870" "AT2G26975" "AT2G27420" "AT2G28120" "AT2G28160" "AT2G28210" "AT2G28305"
## [792] "AT2G28400" "AT2G28570" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29100" "AT2G29170"
## [799] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29400"
## [806] "AT2G29450" "AT2G29460" "AT2G29630" "AT2G29650" "AT2G29670" "AT2G29720" "AT2G29750"
## [813] "AT2G29990" "AT2G30070" "AT2G30080" "AT2G30150" "AT2G30390" "AT2G30395" "AT2G30400"
## [820] "AT2G30420" "AT2G30550" "AT2G30600" "AT2G30615" "AT2G30750" "AT2G30770" "AT2G30930"
## [827] "AT2G31018" "AT2G31020" "AT2G31270" "AT2G31360" "AT2G31585" "AT2G31790" "AT2G31865"
## [834] "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [841] "AT2G32179" "AT2G32180" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32290" "AT2G32430"
## [848] "AT2G32460" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32590"
## [855] "AT2G32640" "AT2G32960" "AT2G33060" "AT2G33110" "AT2G33255" "AT2G33330" "AT2G33580"
## [862] "AT2G33735" "AT2G33855" "AT2G34070" "AT2G34410" "AT2G34420" "AT2G34500" "AT2G34510"
## [869] "AT2G34580" "AT2G34600" "AT2G34610" "AT2G34620" "AT2G34650" "AT2G34760" "AT2G34940"
## [876] "AT2G35130" "AT2G35260" "AT2G35660" "AT2G35710" "AT2G35760" "AT2G35960" "AT2G35980"
## [883] "AT2G36026" "AT2G36050" "AT2G36270" "AT2G36580" "AT2G36670" "AT2G36690" "AT2G36830"
## [890] "AT2G36990" "AT2G37070" "AT2G37100" "AT2G37220" "AT2G37260" "AT2G37440" "AT2G37450"
## [897] "AT2G37530" "AT2G37540" "AT2G37560" "AT2G37585" "AT2G37710" "AT2G37750" "AT2G37790"
## [904] "AT2G37890" "AT2G37950" "AT2G37980" "AT2G38210" "AT2G38230" "AT2G38290" "AT2G38340"
## [911] "AT2G38460" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38540" "AT2G38690" "AT2G38790"
## [918] "AT2G38820" "AT2G38860" "AT2G39110" "AT2G39220" "AT2G39230" "AT2G39320" "AT2G39350"
## [925] "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650" "AT2G39730" "AT2G39880" "AT2G39920"
## [932] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40095" "AT2G40140" "AT2G40150" "AT2G40330"
## [939] "AT2G40540" "AT2G40670" "AT2G40740" "AT2G40840" "AT2G40960" "AT2G41010" "AT2G41050"
## [946] "AT2G41100" "AT2G41342" "AT2G41380" "AT2G41410" "AT2G41430" "AT2G41480" "AT2G41660"
## [953] "AT2G41835" "AT2G41880" "AT2G41990" "AT2G42060" "AT2G42320" "AT2G42350" "AT2G42380"
## [960] "AT2G42485" "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43010" "AT2G43050"
## [967] "AT2G43100" "AT2G43120" "AT2G43140" "AT2G43290" "AT2G43320" "AT2G43550" "AT2G43570"
## [974] "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290" "AT2G44578" "AT2G44600"
## [981] "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45180" "AT2G45220" "AT2G45400" "AT2G45560"
## [988] "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430"
## [995] "AT2G46450" "AT2G46620" "AT2G46680" "AT2G46790" "AT2G47000" "AT2G47130"
## [ reached getOption("max.print") -- omitted 1373 entries ]
##
## $`M6-V6_up_down`
## [1] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520"
## [8] "AT1G02610" "AT1G02660" "AT1G03010" "AT1G03130" "AT1G03200" "AT1G03600" "AT1G03630"
## [15] "AT1G03680" "AT1G03990" "AT1G04250" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04770"
## [22] "AT1G05100" "AT1G05675" "AT1G05840" "AT1G06040" "AT1G06460" "AT1G06620" "AT1G06680"
## [29] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G07500" "AT1G07570" "AT1G08050" "AT1G08380"
## [36] "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020" "AT1G10150"
## [43] "AT1G10586" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11400" "AT1G12090" "AT1G12160"
## [50] "AT1G12380" "AT1G12540" "AT1G12710" "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13150"
## [57] "AT1G13245" "AT1G13260" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650" "AT1G13830"
## [64] "AT1G13930" "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700"
## [71] "AT1G14740" "AT1G15350" "AT1G15810" "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980"
## [78] "AT1G15990" "AT1G17147" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G17970" "AT1G18000"
## [85] "AT1G18010" "AT1G18020" "AT1G18200" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [92] "AT1G19150" "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680"
## [99] "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20310" "AT1G20340" "AT1G20460" "AT1G21130"
## [106] "AT1G21240" "AT1G21500" "AT1G21550" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22220"
## [113] "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23060" "AT1G23390"
## [120] "AT1G23740" "AT1G23850" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26730"
## [127] "AT1G26770" "AT1G26800" "AT1G26930" "AT1G27330" "AT1G27480" "AT1G28130" "AT1G28370"
## [134] "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29640" "AT1G29670"
## [141] "AT1G29910" "AT1G29920" "AT1G30100" "AT1G30160" "AT1G30380" "AT1G30850" "AT1G31120"
## [148] "AT1G31330" "AT1G31690" "AT1G31770" "AT1G31900" "AT1G32060" "AT1G32080" "AT1G32220"
## [155] "AT1G32870" "AT1G33110" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G33950" "AT1G33960"
## [162] "AT1G34180" "AT1G34420" "AT1G35140" "AT1G36370" "AT1G37130" "AT1G43160" "AT1G43245"
## [169] "AT1G43310" "AT1G43670" "AT1G43910" "AT1G44130" "AT1G44446" "AT1G44575" "AT1G47510"
## [176] "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605" "AT1G49200" "AT1G49520" "AT1G49530"
## [183] "AT1G50590" "AT1G51080" "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51760"
## [190] "AT1G51780" "AT1G51805" "AT1G51860" "AT1G52030" "AT1G52200" "AT1G52220" "AT1G52230"
## [197] "AT1G52342" "AT1G52510" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53163" "AT1G53830"
## [204] "AT1G54010" "AT1G54030" "AT1G54095" "AT1G54410" "AT1G54780" "AT1G54790" "AT1G54820"
## [211] "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55610" "AT1G55670" "AT1G56300" "AT1G56340"
## [218] "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G58030" "AT1G59640"
## [225] "AT1G59860" "AT1G60190" "AT1G60730" "AT1G60800" "AT1G61110" "AT1G61120" "AT1G61190"
## [232] "AT1G61215" "AT1G61260" "AT1G61300" "AT1G61340" "AT1G61520" "AT1G61550" "AT1G62520"
## [239] "AT1G63840" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65690"
## [246] "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66130" "AT1G66230" "AT1G66280" "AT1G66350"
## [253] "AT1G66910" "AT1G66930" "AT1G66960" "AT1G67340" "AT1G67420" "AT1G67590" "AT1G67635"
## [260] "AT1G67740" "AT1G67820" "AT1G67910" "AT1G68050" "AT1G68110" "AT1G68840" "AT1G69140"
## [267] "AT1G69260" "AT1G69360" "AT1G69480" "AT1G69530" "AT1G69570" "AT1G69572" "AT1G69830"
## [274] "AT1G69890" "AT1G70090" "AT1G70420" "AT1G70580" "AT1G70690" "AT1G70790" "AT1G70820"
## [281] "AT1G71000" "AT1G71030" "AT1G71110" "AT1G71390" "AT1G71970" "AT1G72210" "AT1G72410"
## [288] "AT1G72416" "AT1G72430" "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645"
## [295] "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G73470" "AT1G73480" "AT1G73600"
## [302] "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74100" "AT1G74430" "AT1G74710"
## [309] "AT1G74730" "AT1G74940" "AT1G75280" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G75690"
## [316] "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76620" "AT1G76640" "AT1G76690"
## [323] "AT1G76980" "AT1G77210" "AT1G77280" "AT1G77760" "AT1G78000" "AT1G78290" "AT1G78600"
## [330] "AT1G78780" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79270" "AT1G79310" "AT1G79330"
## [337] "AT1G80110" "AT1G80280" "AT1G80440" "AT1G80590" "AT1G80840" "AT1G80920" "AT2G01008"
## [344] "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755" "AT2G01830" "AT2G01870" "AT2G01890"
## [351] "AT2G01918" "AT2G02070" "AT2G02340" "AT2G02450" "AT2G03310" "AT2G03410" "AT2G03420"
## [358] "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G04790"
## [365] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940" "AT2G06255" "AT2G06520"
## [372] "AT2G13360" "AT2G14610" "AT2G14620" "AT2G15090" "AT2G15760" "AT2G15890" "AT2G15970"
## [379] "AT2G16270" "AT2G16365" "AT2G16650" "AT2G16720" "AT2G17230" "AT2G17500" "AT2G17880"
## [386] "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18350" "AT2G18560" "AT2G18660" "AT2G18700"
## [393] "AT2G19310" "AT2G20110" "AT2G20142" "AT2G21130" "AT2G21188" "AT2G21320" "AT2G21330"
## [400] "AT2G21970" "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G22810" "AT2G22830"
## [407] "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240" "AT2G24550" "AT2G24580" "AT2G24645"
## [414] "AT2G25200" "AT2G25690" "AT2G25735" "AT2G25900" "AT2G26150" "AT2G26300" "AT2G26390"
## [421] "AT2G26400" "AT2G26480" "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27228" "AT2G27230"
## [428] "AT2G27300" "AT2G27385" "AT2G27420" "AT2G28110" "AT2G28120" "AT2G28450" "AT2G28570"
## [435] "AT2G28605" "AT2G28900" "AT2G29100" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310"
## [442] "AT2G29360" "AT2G29630" "AT2G29650" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30150"
## [449] "AT2G30420" "AT2G30540" "AT2G30570" "AT2G30615" "AT2G30770" "AT2G30820" "AT2G30830"
## [456] "AT2G31040" "AT2G31180" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32460"
## [463] "AT2G32500" "AT2G32640" "AT2G32930" "AT2G33830" "AT2G34010" "AT2G34070" "AT2G34080"
## [470] "AT2G34410" "AT2G34420" "AT2G34430" "AT2G34620" "AT2G35660" "AT2G35940" "AT2G35945"
## [477] "AT2G35950" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G36640" "AT2G37070" "AT2G37440"
## [484] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37750" "AT2G37950" "AT2G38240" "AT2G38250"
## [491] "AT2G38400" "AT2G38480" "AT2G38490" "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300"
## [498] "AT2G39400" "AT2G39435" "AT2G39730" "AT2G39800" "AT2G39900" "AT2G39980" "AT2G40000"
## [505] "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40200" "AT2G40330" "AT2G40340" "AT2G40460"
## [512] "AT2G40550" "AT2G40610" "AT2G40670" "AT2G40840" "AT2G40960" "AT2G41070" "AT2G41430"
## [519] "AT2G42060" "AT2G42485" "AT2G42530" "AT2G42540" "AT2G42760" "AT2G42890" "AT2G43000"
## [526] "AT2G43010" "AT2G43120" "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680"
## [533] "AT2G44130" "AT2G44490" "AT2G44578" "AT2G44600" "AT2G44840" "AT2G44940" "AT2G45180"
## [540] "AT2G45245" "AT2G45560" "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46040" "AT2G46240"
## [547] "AT2G46400" "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46790" "AT2G46820"
## [554] "AT2G46830" "AT2G46900" "AT2G46970" "AT2G47000" "AT2G47420" "AT2G47770" "AT2G47820"
## [561] "AT2G47920" "AT2G47950" "AT3G01060" "AT3G01440" "AT3G01500" "AT3G01770" "AT3G01810"
## [568] "AT3G02210" "AT3G02550" "AT3G02730" "AT3G02885" "AT3G02990" "AT3G03310" "AT3G03440"
## [575] "AT3G04000" "AT3G04210" "AT3G04300" "AT3G04380" "AT3G04420" "AT3G05500" "AT3G06020"
## [582] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G06490" "AT3G06890" "AT3G07200" "AT3G07310"
## [589] "AT3G07320" "AT3G07350" "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440"
## [596] "AT3G09580" "AT3G09600" "AT3G09960" "AT3G10020" "AT3G10060" "AT3G10520" "AT3G10720"
## [603] "AT3G10815" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G11210" "AT3G11450" "AT3G11480"
## [610] "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13437" "AT3G13470"
## [617] "AT3G13610" "AT3G13730" "AT3G14200" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870"
## [624] "AT3G15536" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G15950" "AT3G16130" "AT3G16250"
## [631] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17390" "AT3G17420"
## [638] "AT3G17510" "AT3G17640" "AT3G17690" "AT3G17840" "AT3G17860" "AT3G18050" "AT3G18080"
## [645] "AT3G18500" "AT3G18710" "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19100"
## [652] "AT3G19615" "AT3G19680" "AT3G19690" "AT3G19970" "AT3G20250" "AT3G21055" "AT3G21080"
## [659] "AT3G21320" "AT3G21500" "AT3G21670" "AT3G21700" "AT3G21780" "AT3G21950" "AT3G22160"
## [666] "AT3G22210" "AT3G22275" "AT3G22290" "AT3G23880" "AT3G24430" "AT3G24515" "AT3G24518"
## [673] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25670" "AT3G25890" "AT3G26180"
## [680] "AT3G26290" "AT3G26440" "AT3G26470" "AT3G26510" "AT3G26740" "AT3G27170" "AT3G27415"
## [687] "AT3G27416" "AT3G27690" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510" "AT3G28580"
## [694] "AT3G29320" "AT3G29330" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G45970" "AT3G46370"
## [701] "AT3G46630" "AT3G46640" "AT3G46658" "AT3G46660" "AT3G46780" "AT3G46970" "AT3G47070"
## [708] "AT3G47420" "AT3G47460" "AT3G47470" "AT3G47480" "AT3G47500" "AT3G47730" "AT3G48090"
## [715] "AT3G48100" "AT3G48115" "AT3G48200" "AT3G48280" "AT3G48420" "AT3G48520" "AT3G48580"
## [722] "AT3G48630" "AT3G48700" "AT3G48720" "AT3G48780" "AT3G49570" "AT3G49580" "AT3G49790"
## [729] "AT3G50060" "AT3G50770" "AT3G50820" "AT3G50840" "AT3G50920" "AT3G50930" "AT3G50960"
## [736] "AT3G51080" "AT3G51090" "AT3G51400" "AT3G51470" "AT3G51670" "AT3G51750" "AT3G51860"
## [743] "AT3G52070" "AT3G52072" "AT3G52180" "AT3G52430" "AT3G52960" "AT3G53210" "AT3G53470"
## [750] "AT3G53800" "AT3G53830" "AT3G54320" "AT3G54366" "AT3G54490" "AT3G54500" "AT3G54890"
## [757] "AT3G55060" "AT3G55240" "AT3G55500" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [764] "AT3G55970" "AT3G56160" "AT3G56170" "AT3G56260" "AT3G56290" "AT3G56940" "AT3G57260"
## [771] "AT3G57380" "AT3G57460" "AT3G57740" "AT3G57950" "AT3G59060" "AT3G59750" "AT3G59870"
## [778] "AT3G59900" "AT3G59930" "AT3G59940" "AT3G60390" "AT3G60420" "AT3G60470" "AT3G60490"
## [785] "AT3G60961" "AT3G60966" "AT3G61060" "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430"
## [792] "AT3G61450" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870" "AT3G61890" "AT3G61930"
## [799] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63010" "AT3G63140" "AT3G63160" "AT3G63380"
## [806] "AT4G00165" "AT4G00700" "AT4G00970" "AT4G01330" "AT4G01430" "AT4G01535" "AT4G01540"
## [813] "AT4G01670" "AT4G02075" "AT4G02360" "AT4G02380" "AT4G02760" "AT4G02770" "AT4G03400"
## [820] "AT4G03460" "AT4G03510" "AT4G04020" "AT4G04223" "AT4G04330" "AT4G04340" "AT4G04490"
## [827] "AT4G04500" "AT4G04510" "AT4G04810" "AT4G04830" "AT4G05010" "AT4G05020" "AT4G05070"
## [834] "AT4G05100" "AT4G05180" "AT4G06534" "AT4G06744" "AT4G08950" "AT4G09010" "AT4G09650"
## [841] "AT4G09750" "AT4G09760" "AT4G09770" "AT4G10120" "AT4G10340" "AT4G10390" "AT4G10500"
## [848] "AT4G11240" "AT4G11300" "AT4G11350" "AT4G11360" "AT4G11521" "AT4G11990" "AT4G12320"
## [855] "AT4G12330" "AT4G12390" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [862] "AT4G12800" "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810"
## [869] "AT4G14270" "AT4G14560" "AT4G14630" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248"
## [876] "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G15975" "AT4G16146" "AT4G16260"
## [883] "AT4G16350" "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17660"
## [890] "AT4G17670" "AT4G17730" "AT4G17810" "AT4G18205" "AT4G18220" "AT4G19170" "AT4G19530"
## [897] "AT4G20320" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445" "AT4G21680" "AT4G21790"
## [904] "AT4G21870" "AT4G21990" "AT4G22070" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23150"
## [911] "AT4G23180" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G23800" "AT4G23810" "AT4G24240"
## [918] "AT4G25290" "AT4G25390" "AT4G25433" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26080"
## [925] "AT4G26120" "AT4G26470" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440"
## [932] "AT4G27590" "AT4G27700" "AT4G27860" "AT4G27870" "AT4G28240" "AT4G28270" "AT4G28703"
## [939] "AT4G28750" "AT4G29190" "AT4G29380" "AT4G29740" "AT4G29930" "AT4G30180" "AT4G30650"
## [946] "AT4G30662" "AT4G32280" "AT4G32340" "AT4G32590" "AT4G32920" "AT4G32980" "AT4G33010"
## [953] "AT4G33150" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34200" "AT4G34220"
## [960] "AT4G34250" "AT4G34630" "AT4G34650" "AT4G34900" "AT4G35600" "AT4G35655" "AT4G35720"
## [967] "AT4G36010" "AT4G36040" "AT4G36430" "AT4G36530" "AT4G36640" "AT4G36780" "AT4G36950"
## [974] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37850" "AT4G37900" "AT4G37925"
## [981] "AT4G38550" "AT4G38552" "AT4G38560" "AT4G38770" "AT4G39030" "AT4G39190" "AT4G39260"
## [988] "AT4G39580" "AT4G39710" "AT4G39730" "AT4G39950" "AT5G01015" "AT5G01520" "AT5G01530"
## [995] "AT5G01840" "AT5G01850" "AT5G02100" "AT5G02160" "AT5G02170" "AT5G02180"
## [ reached getOption("max.print") -- omitted 311 entries ]
##
## $`A6-V6_up_down`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03020" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04240"
## [15] "AT1G04490" "AT1G05010" "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148"
## [22] "AT1G06360" "AT1G08050" "AT1G08860" "AT1G09950" "AT1G10230" "AT1G11310" "AT1G11330"
## [29] "AT1G11905" "AT1G12210" "AT1G12240" "AT1G12540" "AT1G13110" "AT1G13310" "AT1G13550"
## [36] "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G16370" "AT1G16400" "AT1G16410"
## [43] "AT1G17147" "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19650"
## [50] "AT1G19670" "AT1G19960" "AT1G21250" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400"
## [57] "AT1G22770" "AT1G23200" "AT1G25370" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27100" "AT1G28010" "AT1G29280" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420"
## [71] "AT1G31280" "AT1G31290" "AT1G31690" "AT1G31770" "AT1G32920" "AT1G32940" "AT1G32960"
## [78] "AT1G33800" "AT1G34210" "AT1G35210" "AT1G35230" "AT1G43310" "AT1G43910" "AT1G44900"
## [85] "AT1G49520" "AT1G49530" "AT1G51660" "AT1G51780" "AT1G52200" "AT1G53620" "AT1G53625"
## [92] "AT1G54095" "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990"
## [99] "AT1G59865" "AT1G61140" "AT1G61370" "AT1G63040" "AT1G63570" "AT1G63750" "AT1G63820"
## [106] "AT1G64710" "AT1G65590" "AT1G66280" "AT1G66550" "AT1G66600" "AT1G67635" "AT1G67800"
## [113] "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G69370" "AT1G69480" "AT1G70420"
## [120] "AT1G70690" "AT1G71100" "AT1G72140" "AT1G72180" "AT1G72450" "AT1G72930" "AT1G73210"
## [127] "AT1G73805" "AT1G74430" "AT1G74710" "AT1G74950" "AT1G75540" "AT1G75830" "AT1G76970"
## [134] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G01830" "AT2G02930" "AT2G02990" "AT2G03980"
## [141] "AT2G04040" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G05070" "AT2G06255" "AT2G07687"
## [148] "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480" "AT2G16440" "AT2G18660" "AT2G20110"
## [155] "AT2G21510" "AT2G21790" "AT2G22200" "AT2G22770" "AT2G22930" "AT2G23760" "AT2G23810"
## [162] "AT2G24160" "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25130" "AT2G25737" "AT2G26150"
## [169] "AT2G26240" "AT2G26440" "AT2G26560" "AT2G27228" "AT2G27230" "AT2G28210" "AT2G28570"
## [176] "AT2G28890" "AT2G29720" "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31018" "AT2G31020"
## [183] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34010" "AT2G34070" "AT2G34500" "AT2G35950"
## [190] "AT2G36350" "AT2G36380" "AT2G36470" "AT2G36815" "AT2G36830" "AT2G37180" "AT2G37560"
## [197] "AT2G37940" "AT2G37980" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G38790" "AT2G39110"
## [204] "AT2G39250" "AT2G39800" "AT2G40340" "AT2G40460" "AT2G40550" "AT2G41380" "AT2G41835"
## [211] "AT2G42760" "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130"
## [218] "AT2G47140" "AT2G47600" "AT2G47730" "AT2G47950" "AT3G01180" "AT3G01290" "AT3G02840"
## [225] "AT3G02990" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G06020" "AT3G07195" "AT3G07720"
## [232] "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11470" "AT3G11480" "AT3G11840"
## [239] "AT3G13080" "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G14870" "AT3G15356"
## [246] "AT3G15720" "AT3G16460" "AT3G16510" "AT3G17510" "AT3G17860" "AT3G19010" "AT3G19100"
## [253] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21670" "AT3G21780" "AT3G22370" "AT3G22910"
## [260] "AT3G23530" "AT3G23910" "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600"
## [267] "AT3G26830" "AT3G27170" "AT3G27960" "AT3G28580" "AT3G28930" "AT3G29240" "AT3G29400"
## [274] "AT3G41768" "AT3G43270" "AT3G44350" "AT3G44830" "AT3G45260" "AT3G46520" "AT3G46940"
## [281] "AT3G47540" "AT3G47750" "AT3G47820" "AT3G48090" "AT3G48350" "AT3G48520" "AT3G48640"
## [288] "AT3G48850" "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150"
## [295] "AT3G54820" "AT3G55290" "AT3G55470" "AT3G55500" "AT3G55970" "AT3G56260" "AT3G56710"
## [302] "AT3G56870" "AT3G56891" "AT3G57700" "AT3G57780" "AT3G59710" "AT3G60190" "AT3G60420"
## [309] "AT3G60450" "AT3G60966" "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61760" "AT3G61890"
## [316] "AT3G62700" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895" "AT4G01950" "AT4G02380"
## [323] "AT4G02420" "AT4G02550" "AT4G03060" "AT4G03400" "AT4G05030" "AT4G09300" "AT4G09570"
## [330] "AT4G10060" "AT4G10390" "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G12030"
## [337] "AT4G13180" "AT4G14220" "AT4G14368" "AT4G14610" "AT4G15070" "AT4G15430" "AT4G16740"
## [344] "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660" "AT4G21380" "AT4G21840"
## [351] "AT4G21903" "AT4G22200" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010" "AT4G23170"
## [358] "AT4G23180" "AT4G23250" "AT4G23420" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25433"
## [365] "AT4G25780" "AT4G25900" "AT4G27745" "AT4G27870" "AT4G28390" "AT4G29440" "AT4G30280"
## [372] "AT4G30640" "AT4G32780" "AT4G33925" "AT4G33930" "AT4G34135" "AT4G34390" "AT4G35180"
## [379] "AT4G36010" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370" "AT4G37390" "AT4G37850"
## [386] "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640" "AT5G01840"
## [393] "AT5G01980" "AT5G02260" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650"
## [400] "AT5G07690" "AT5G08335" "AT5G08790" "AT5G10390" "AT5G10440" "AT5G11160" "AT5G12930"
## [407] "AT5G12940" "AT5G13190" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G14760" "AT5G15190"
## [414] "AT5G17380" "AT5G17490" "AT5G17780" "AT5G18470" "AT5G19110" "AT5G20400" "AT5G20960"
## [421] "AT5G21280" "AT5G22060" "AT5G22300" "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205"
## [428] "AT5G24206" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G24910" "AT5G25250" "AT5G25930"
## [435] "AT5G26260" "AT5G26270" "AT5G27350" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990"
## [442] "AT5G39020" "AT5G39040" "AT5G39680" "AT5G41120" "AT5G41180" "AT5G41730" "AT5G41880"
## [449] "AT5G42380" "AT5G42440" "AT5G42650" "AT5G43910" "AT5G44070" "AT5G44350" "AT5G44635"
## [456] "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830" "AT5G52020" "AT5G52120"
## [463] "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52882" "AT5G52910" "AT5G53290"
## [470] "AT5G54300" "AT5G54470" "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860"
## [477] "AT5G55450" "AT5G56960" "AT5G57340" "AT5G57800" "AT5G59720" "AT5G60280" "AT5G60890"
## [484] "AT5G60900" "AT5G61890" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62470" "AT5G62770"
## [491] "AT5G62920" "AT5G63450" "AT5G64170" "AT5G64750" "AT5G64810" "AT5G64870" "AT5G65280"
## [498] "AT5G66052" "AT5G66640" "AT5G66890" "AT5G67150" "AT5G67160" "AT5G67340" "ATCG00020"
## [505] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [512] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [519] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [526] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [533] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $`M12-A12_up_down`
## [1] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01340"
## [8] "AT1G01370" "AT1G01430" "AT1G01480" "AT1G01520" "AT1G01560" "AT1G01590" "AT1G01610"
## [15] "AT1G01620" "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390"
## [22] "AT1G02405" "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02640" "AT1G02650" "AT1G02660"
## [29] "AT1G02700" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03180" "AT1G03210" "AT1G03290"
## [36] "AT1G03300" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03600" "AT1G03630" "AT1G03660"
## [43] "AT1G03680" "AT1G03850" "AT1G03870" "AT1G03990" "AT1G04040" "AT1G04160" "AT1G04310"
## [50] "AT1G04360" "AT1G04420" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [57] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05310" "AT1G05340" "AT1G05420" "AT1G05570"
## [64] "AT1G05680" "AT1G05835" "AT1G05880" "AT1G06160" "AT1G06180" "AT1G06240" "AT1G06250"
## [71] "AT1G06260" "AT1G06265" "AT1G06460" "AT1G06620" "AT1G06660" "AT1G06680" "AT1G06850"
## [78] "AT1G07000" "AT1G07020" "AT1G07110" "AT1G07320" "AT1G07430" "AT1G07440" "AT1G07476"
## [85] "AT1G07485" "AT1G07490" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620"
## [92] "AT1G07630" "AT1G07880" "AT1G08050" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08630"
## [99] "AT1G08810" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240" "AT1G09340"
## [106] "AT1G09350" "AT1G09440" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09750" "AT1G09794"
## [113] "AT1G09930" "AT1G09932" "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10380" "AT1G10410"
## [120] "AT1G10417" "AT1G10520" "AT1G10585" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10910"
## [127] "AT1G10960" "AT1G11000" "AT1G11100" "AT1G11130" "AT1G11330" "AT1G11362" "AT1G11400"
## [134] "AT1G11480" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11785" "AT1G11860" "AT1G11905"
## [141] "AT1G11925" "AT1G12060" "AT1G12090" "AT1G12250" "AT1G12320" "AT1G12500" "AT1G12540"
## [148] "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150" "AT1G13250" "AT1G13310" "AT1G13330"
## [155] "AT1G13340" "AT1G13380" "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550"
## [162] "AT1G13650" "AT1G13790" "AT1G13990" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14180"
## [169] "AT1G14185" "AT1G14260" "AT1G14270" "AT1G14330" "AT1G14345" "AT1G14440" "AT1G14540"
## [176] "AT1G14687" "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G14900" "AT1G15000"
## [183] "AT1G15010" "AT1G15040" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180" "AT1G15260"
## [190] "AT1G15290" "AT1G15380" "AT1G15405" "AT1G15415" "AT1G15510" "AT1G15520" "AT1G15550"
## [197] "AT1G15670" "AT1G15690" "AT1G15790" "AT1G15800" "AT1G15820" "AT1G15980" "AT1G15990"
## [204] "AT1G16080" "AT1G16150" "AT1G16300" "AT1G16410" "AT1G16420" "AT1G16500" "AT1G16670"
## [211] "AT1G16720" "AT1G17020" "AT1G17100" "AT1G17200" "AT1G17380" "AT1G17490" "AT1G17500"
## [218] "AT1G17600" "AT1G17615" "AT1G17650" "AT1G17745" "AT1G17750" "AT1G17850" "AT1G18000"
## [225] "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18570" "AT1G18620" "AT1G18650"
## [232] "AT1G18735" "AT1G18890" "AT1G19020" "AT1G19150" "AT1G19160" "AT1G19180" "AT1G19200"
## [239] "AT1G19220" "AT1G19230" "AT1G19250" "AT1G19270" "AT1G19350" "AT1G19450" "AT1G19490"
## [246] "AT1G19640" "AT1G20010" "AT1G20020" "AT1G20190" "AT1G20310" "AT1G20340" "AT1G20470"
## [253] "AT1G20740" "AT1G20780" "AT1G20823" "AT1G21000" "AT1G21100" "AT1G21200" "AT1G21210"
## [260] "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21500" "AT1G21520"
## [267] "AT1G21525" "AT1G21680" "AT1G21740" "AT1G21880" "AT1G21910" "AT1G21930" "AT1G22180"
## [274] "AT1G22220" "AT1G22280" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22403" "AT1G22410"
## [281] "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22550" "AT1G22590" "AT1G22840" "AT1G22850"
## [288] "AT1G22985" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23120" "AT1G23200"
## [295] "AT1G23205" "AT1G23340" "AT1G23470" "AT1G23480" "AT1G23530" "AT1G23550" "AT1G23560"
## [302] "AT1G23740" "AT1G23840" "AT1G23850" "AT1G23935" "AT1G23940" "AT1G24140" "AT1G24145"
## [309] "AT1G24147" "AT1G24150" "AT1G24577" "AT1G25240" "AT1G25400" "AT1G25450" "AT1G26130"
## [316] "AT1G26150" "AT1G26200" "AT1G26230" "AT1G26250" "AT1G26290" "AT1G26330" "AT1G26380"
## [323] "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26761" "AT1G26762" "AT1G26810" "AT1G26930"
## [330] "AT1G27020" "AT1G27110" "AT1G27210" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [337] "AT1G27980" "AT1G28190" "AT1G28330" "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29090"
## [344] "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460"
## [351] "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29670" "AT1G29680"
## [358] "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980" "AT1G30020" "AT1G30040"
## [365] "AT1G30135" "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30360" "AT1G30380" "AT1G30473"
## [372] "AT1G30520" "AT1G30620" "AT1G30700" "AT1G30755" "AT1G30760" "AT1G30814" "AT1G30840"
## [379] "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330"
## [386] "AT1G31540" "AT1G31550" "AT1G31710" "AT1G31835" "AT1G31900" "AT1G31950" "AT1G32060"
## [393] "AT1G32080" "AT1G32200" "AT1G32210" "AT1G32220" "AT1G32350" "AT1G32470" "AT1G32540"
## [400] "AT1G32550" "AT1G32560" "AT1G32760" "AT1G32860" "AT1G32870" "AT1G32910" "AT1G32920"
## [407] "AT1G32940" "AT1G32950" "AT1G32960" "AT1G32990" "AT1G33030" "AT1G33240" "AT1G33420"
## [414] "AT1G33430" "AT1G33440" "AT1G33560" "AT1G33600" "AT1G33720" "AT1G33730" "AT1G33770"
## [421] "AT1G33811" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140"
## [428] "AT1G35210" "AT1G35230" "AT1G35420" "AT1G35580" "AT1G35680" "AT1G35710" "AT1G35910"
## [435] "AT1G36622" "AT1G36675" "AT1G42970" "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910"
## [442] "AT1G44130" "AT1G44575" "AT1G45145" "AT1G45163" "AT1G45165" "AT1G45545" "AT1G46480"
## [449] "AT1G47056" "AT1G47440" "AT1G47510" "AT1G47670" "AT1G48000" "AT1G48030" "AT1G48315"
## [456] "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010" "AT1G49050" "AT1G49200"
## [463] "AT1G49230" "AT1G49320" "AT1G49380" "AT1G49450" "AT1G49650" "AT1G49730" "AT1G49900"
## [470] "AT1G50420" "AT1G50450" "AT1G50560" "AT1G50732" "AT1G50740" "AT1G50900" "AT1G50910"
## [477] "AT1G51080" "AT1G51110" "AT1G51130" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780"
## [484] "AT1G51790" "AT1G51800" "AT1G51860" "AT1G51890" "AT1G51940" "AT1G52000" "AT1G52190"
## [491] "AT1G52200" "AT1G52230" "AT1G52240" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690"
## [498] "AT1G52855" "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53230" "AT1G53233" "AT1G53250"
## [505] "AT1G53300" "AT1G53620" "AT1G53625" "AT1G53700" "AT1G53830" "AT1G53920" "AT1G54100"
## [512] "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54730" "AT1G54740" "AT1G54780" "AT1G54820"
## [519] "AT1G54890" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490" "AT1G55610" "AT1G55670"
## [526] "AT1G55790" "AT1G56120" "AT1G56210" "AT1G56240" "AT1G56242" "AT1G56430" "AT1G56470"
## [533] "AT1G56500" "AT1G56550" "AT1G56650" "AT1G56660" "AT1G56710" "AT1G56720" "AT1G57560"
## [540] "AT1G57630" "AT1G57650" "AT1G57943" "AT1G57990" "AT1G58150" "AT1G58370" "AT1G59590"
## [547] "AT1G59640" "AT1G59740" "AT1G59840" "AT1G59950" "AT1G60000" "AT1G60160" "AT1G60190"
## [554] "AT1G60390" "AT1G60420" "AT1G60550" "AT1G60590" "AT1G60600" "AT1G60610" "AT1G60690"
## [561] "AT1G60700" "AT1G60730" "AT1G60800" "AT1G60890" "AT1G60950" "AT1G61065" "AT1G61140"
## [568] "AT1G61160" "AT1G61215" "AT1G61240" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [575] "AT1G61520" "AT1G61550" "AT1G61560" "AT1G61795" "AT1G61800" "AT1G61810" "AT1G61820"
## [582] "AT1G62300" "AT1G62422" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62570" "AT1G62580"
## [589] "AT1G62750" "AT1G62760" "AT1G62840" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63245"
## [596] "AT1G63400" "AT1G63440" "AT1G63460" "AT1G63480" "AT1G63720" "AT1G63740" "AT1G63820"
## [603] "AT1G63840" "AT1G64065" "AT1G64150" "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64610"
## [610] "AT1G64625" "AT1G64660" "AT1G64680" "AT1G64720" "AT1G64770" "AT1G65230" "AT1G65483"
## [617] "AT1G65490" "AT1G65590" "AT1G65610" "AT1G65690" "AT1G65860" "AT1G65900" "AT1G66040"
## [624] "AT1G66090" "AT1G66100" "AT1G66130" "AT1G66140" "AT1G66170" "AT1G66180" "AT1G66280"
## [631] "AT1G66410" "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725"
## [638] "AT1G66810" "AT1G66820" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67040" "AT1G67060"
## [645] "AT1G67070" "AT1G67090" "AT1G67190" "AT1G67195" "AT1G67360" "AT1G67520" "AT1G67590"
## [652] "AT1G67635" "AT1G67650" "AT1G67700" "AT1G67740" "AT1G67750" "AT1G67800" "AT1G67810"
## [659] "AT1G67850" "AT1G67856" "AT1G67970" "AT1G67980" "AT1G68010" "AT1G68190" "AT1G68200"
## [666] "AT1G68238" "AT1G68250" "AT1G68390" "AT1G68400" "AT1G68440" "AT1G68520" "AT1G68530"
## [673] "AT1G68560" "AT1G68620" "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68810" "AT1G68820"
## [680] "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940" "AT1G69050" "AT1G69140" "AT1G69260"
## [687] "AT1G69480" "AT1G69490" "AT1G69520" "AT1G69530" "AT1G69610" "AT1G69720" "AT1G69790"
## [694] "AT1G69840" "AT1G69880" "AT1G69930" "AT1G70220" "AT1G70280" "AT1G70370" "AT1G70410"
## [701] "AT1G70430" "AT1G70460" "AT1G70480" "AT1G70500" "AT1G70640" "AT1G70690" "AT1G70760"
## [708] "AT1G70810" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71100" "AT1G71520" "AT1G71690"
## [715] "AT1G71697" "AT1G71870" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125" "AT1G72140"
## [722] "AT1G72220" "AT1G72240" "AT1G72270" "AT1G72310" "AT1G72330" "AT1G72420" "AT1G72430"
## [729] "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700"
## [736] "AT1G72770" "AT1G72810" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [743] "AT1G72950" "AT1G73010" "AT1G73066" "AT1G73110" "AT1G73260" "AT1G73325" "AT1G73550"
## [750] "AT1G73590" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73965" "AT1G74070" "AT1G74080"
## [757] "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74370" "AT1G74470" "AT1G74670" "AT1G74710"
## [764] "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75170" "AT1G75250" "AT1G75360" "AT1G75388"
## [771] "AT1G75390" "AT1G75500" "AT1G75510" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [778] "AT1G75800" "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470"
## [785] "AT1G76590" "AT1G76610" "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000"
## [792] "AT1G77131" "AT1G77145" "AT1G77210" "AT1G77280" "AT1G77400" "AT1G77490" "AT1G77500"
## [799] "AT1G77630" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78020" "AT1G78060"
## [806] "AT1G78190" "AT1G78260" "AT1G78320" "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78450"
## [813] "AT1G78460" "AT1G78570" "AT1G78780" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G78970"
## [820] "AT1G78995" "AT1G79060" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79760" "AT1G79770"
## [827] "AT1G79900" "AT1G80030" "AT1G80080" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300"
## [834] "AT1G80450" "AT1G80520" "AT1G80530" "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630"
## [841] "AT1G80640" "AT1G80690" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01420" "AT2G01540"
## [848] "AT2G01590" "AT2G01630" "AT2G01650" "AT2G01760" "AT2G01818" "AT2G01990" "AT2G02020"
## [855] "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02390" "AT2G02780"
## [862] "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03090" "AT2G03270" "AT2G03420" "AT2G03750"
## [869] "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100" "AT2G04380" "AT2G04400" "AT2G04430"
## [876] "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04780" "AT2G04790" "AT2G04900" "AT2G05070"
## [883] "AT2G05160" "AT2G05320" "AT2G05630" "AT2G05790" "AT2G05910" "AT2G05914" "AT2G05940"
## [890] "AT2G05995" "AT2G06255" "AT2G06850" "AT2G07687" "AT2G07688" "AT2G07732" "AT2G10940"
## [897] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13790" "AT2G13810" "AT2G13820" "AT2G13960"
## [904] "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620" "AT2G14800" "AT2G14880" "AT2G14890"
## [911] "AT2G15090" "AT2G15400" "AT2G15440" "AT2G15760" "AT2G15860" "AT2G15880" "AT2G16060"
## [918] "AT2G16270" "AT2G16367" "AT2G16530" "AT2G16630" "AT2G16700" "AT2G16710" "AT2G16720"
## [925] "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17230" "AT2G17500" "AT2G17720"
## [932] "AT2G17740" "AT2G17780" "AT2G18000" "AT2G18300" "AT2G18560" "AT2G18660" "AT2G18690"
## [939] "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170" "AT2G19190" "AT2G19620" "AT2G19690"
## [946] "AT2G19710" "AT2G19800" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20180" "AT2G20210"
## [953] "AT2G20290" "AT2G20340" "AT2G20680" "AT2G20825" "AT2G20890" "AT2G21050" "AT2G21080"
## [960] "AT2G21140" "AT2G21188" "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21660"
## [967] "AT2G21780" "AT2G21830" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [974] "AT2G22770" "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23030" "AT2G23100"
## [981] "AT2G23110" "AT2G23130" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23590" "AT2G23600"
## [988] "AT2G23680" "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24060" "AT2G24090" "AT2G24150"
## [995] "AT2G24170" "AT2G24240" "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24580"
## [ reached getOption("max.print") -- omitted 2203 entries ]
##
## $`M12-V12_up_down`
## [1] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" "AT1G01430" "AT1G01470" "AT1G01480"
## [8] "AT1G01520" "AT1G01560" "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205"
## [15] "AT1G02220" "AT1G02230" "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02640"
## [22] "AT1G02650" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03130" "AT1G03300" "AT1G03457"
## [29] "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04310" "AT1G04490" "AT1G04570" "AT1G04700"
## [36] "AT1G04730" "AT1G04780" "AT1G04980" "AT1G05100" "AT1G05420" "AT1G05680" "AT1G05690"
## [43] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06160" "AT1G06180" "AT1G06570"
## [50] "AT1G06620" "AT1G06760" "AT1G07150" "AT1G07300" "AT1G07430" "AT1G07500" "AT1G07590"
## [57] "AT1G07600" "AT1G07610" "AT1G07670" "AT1G07880" "AT1G08050" "AT1G08300" "AT1G08380"
## [64] "AT1G08560" "AT1G08860" "AT1G08900" "AT1G08920" "AT1G09080" "AT1G09180" "AT1G09200"
## [71] "AT1G09240" "AT1G09350" "AT1G09440" "AT1G09530" "AT1G09750" "AT1G09950" "AT1G10020"
## [78] "AT1G10230" "AT1G10340" "AT1G10380" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [85] "AT1G10586" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G10910" "AT1G10930"
## [92] "AT1G10990" "AT1G11000" "AT1G11185" "AT1G11350" "AT1G11380" "AT1G11400" "AT1G11480"
## [99] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12460" "AT1G12540" "AT1G12700" "AT1G12730"
## [106] "AT1G12860" "AT1G13110" "AT1G13280" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650"
## [113] "AT1G13700" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14070" "AT1G14120"
## [120] "AT1G14180" "AT1G14185" "AT1G14260" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15010"
## [127] "AT1G15100" "AT1G15110" "AT1G15125" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [134] "AT1G15430" "AT1G15520" "AT1G15550" "AT1G15670" "AT1G15890" "AT1G15980" "AT1G15990"
## [141] "AT1G16300" "AT1G16640" "AT1G16850" "AT1G17147" "AT1G17380" "AT1G17420" "AT1G17500"
## [148] "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G17990" "AT1G18000"
## [155] "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550" "AT1G18620"
## [162] "AT1G18650" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19340"
## [169] "AT1G19490" "AT1G19570" "AT1G19610" "AT1G19620" "AT1G19640" "AT1G19650" "AT1G19670"
## [176] "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310" "AT1G20440" "AT1G20450"
## [183] "AT1G20640" "AT1G20970" "AT1G21000" "AT1G21050" "AT1G21120" "AT1G21130" "AT1G21326"
## [190] "AT1G21410" "AT1G21520" "AT1G21525" "AT1G21550" "AT1G21580" "AT1G21910" "AT1G21920"
## [197] "AT1G22220" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490"
## [204] "AT1G22590" "AT1G22740" "AT1G22770" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080"
## [211] "AT1G23120" "AT1G23200" "AT1G23205" "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23550"
## [218] "AT1G23750" "AT1G23850" "AT1G24090" "AT1G24145" "AT1G24147" "AT1G24210" "AT1G24600"
## [225] "AT1G25422" "AT1G25425" "AT1G25440" "AT1G25450" "AT1G25500" "AT1G26150" "AT1G26420"
## [232] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26800" "AT1G26920" "AT1G26930"
## [239] "AT1G26960" "AT1G27020" "AT1G27110" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [246] "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G28360"
## [253] "AT1G28370" "AT1G28400" "AT1G28480" "AT1G28660" "AT1G28670" "AT1G29050" "AT1G29195"
## [260] "AT1G29290" "AT1G29330" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [267] "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320" "AT1G30520" "AT1G30620" "AT1G30814"
## [281] "AT1G30840" "AT1G30850" "AT1G31120" "AT1G31173" "AT1G31290" "AT1G31355" "AT1G31550"
## [288] "AT1G31820" "AT1G31835" "AT1G31900" "AT1G31920" "AT1G31950" "AT1G32560" "AT1G32640"
## [295] "AT1G32730" "AT1G32740" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33055" "AT1G33110"
## [302] "AT1G33240" "AT1G33260" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34180" "AT1G34315"
## [309] "AT1G34420" "AT1G35140" "AT1G35210" "AT1G36940" "AT1G42980" "AT1G43160" "AT1G43245"
## [316] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G44900" "AT1G45145" "AT1G47510"
## [323] "AT1G47890" "AT1G48000" "AT1G48100" "AT1G48260" "AT1G48315" "AT1G48320" "AT1G48370"
## [330] "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49050" "AT1G49200" "AT1G49230" "AT1G49450"
## [337] "AT1G49520" "AT1G50040" "AT1G50180" "AT1G50260" "AT1G50590" "AT1G50640" "AT1G50732"
## [344] "AT1G51140" "AT1G51400" "AT1G51402" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G51850"
## [351] "AT1G51920" "AT1G51940" "AT1G52030" "AT1G52190" "AT1G52230" "AT1G52315" "AT1G52565"
## [358] "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52750" "AT1G52760" "AT1G52770" "AT1G52800"
## [365] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53070" "AT1G53230" "AT1G53233"
## [372] "AT1G53320" "AT1G53410" "AT1G53470" "AT1G53560" "AT1G53620" "AT1G53625" "AT1G53760"
## [379] "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100" "AT1G54120" "AT1G54130" "AT1G54570"
## [386] "AT1G54730" "AT1G54740" "AT1G54820" "AT1G54890" "AT1G55330" "AT1G55370" "AT1G55610"
## [393] "AT1G56220" "AT1G56580" "AT1G56720" "AT1G57560" "AT1G57610" "AT1G57630" "AT1G57650"
## [400] "AT1G57943" "AT1G58225" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740" "AT1G59950"
## [407] "AT1G60190" "AT1G60270" "AT1G60390" "AT1G60830" "AT1G60860" "AT1G61065" "AT1G61110"
## [414] "AT1G61120" "AT1G61140" "AT1G61190" "AT1G61215" "AT1G61240" "AT1G61255" "AT1G61260"
## [421] "AT1G61300" "AT1G61340" "AT1G61500" "AT1G61610" "AT1G61640" "AT1G61795" "AT1G61890"
## [428] "AT1G62520" "AT1G62790" "AT1G62840" "AT1G62910" "AT1G63080" "AT1G63245" "AT1G63260"
## [435] "AT1G63400" "AT1G63530" "AT1G63570" "AT1G63720" "AT1G63880" "AT1G64320" "AT1G64380"
## [442] "AT1G64610" "AT1G64620" "AT1G64625" "AT1G64660" "AT1G64670" "AT1G65295" "AT1G65500"
## [449] "AT1G65610" "AT1G65845" "AT1G66090" "AT1G66170" "AT1G66180" "AT1G66280" "AT1G66550"
## [456] "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G66810" "AT1G66920"
## [463] "AT1G66940" "AT1G67070" "AT1G67420" "AT1G67590" "AT1G68190" "AT1G68200" "AT1G68250"
## [470] "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68520" "AT1G68585" "AT1G68620"
## [477] "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69260" "AT1G69360" "AT1G69480"
## [484] "AT1G69600" "AT1G69610" "AT1G69780" "AT1G69790" "AT1G69840" "AT1G69870" "AT1G69930"
## [491] "AT1G70100" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [498] "AT1G70800" "AT1G70810" "AT1G70940" "AT1G71030" "AT1G71100" "AT1G71690" "AT1G71697"
## [505] "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72120" "AT1G72210" "AT1G72240" "AT1G72270"
## [512] "AT1G72330" "AT1G72416" "AT1G72430" "AT1G72450" "AT1G72520" "AT1G72600" "AT1G72610"
## [519] "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900"
## [526] "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010" "AT1G73110" "AT1G73390" "AT1G73480"
## [533] "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73890" "AT1G73965"
## [540] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74670" "AT1G74710" "AT1G74930" "AT1G74940"
## [547] "AT1G74950" "AT1G75020" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75220" "AT1G75250"
## [554] "AT1G75370" "AT1G75388" "AT1G75390" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580"
## [561] "AT1G75750" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76100" "AT1G76180" "AT1G76240"
## [568] "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650" "AT1G76760" "AT1G76790" "AT1G76960"
## [575] "AT1G76980" "AT1G77131" "AT1G77138" "AT1G77200" "AT1G77210" "AT1G77280" "AT1G77450"
## [582] "AT1G77500" "AT1G77510" "AT1G77640" "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890"
## [589] "AT1G77990" "AT1G78000" "AT1G78070" "AT1G78080" "AT1G78190" "AT1G78210" "AT1G78265"
## [596] "AT1G78270" "AT1G78380" "AT1G78450" "AT1G78570" "AT1G78820" "AT1G78830" "AT1G78860"
## [603] "AT1G78940" "AT1G79110" "AT1G79170" "AT1G79270" "AT1G79400" "AT1G79520" "AT1G79570"
## [610] "AT1G79760" "AT1G79960" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [617] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630" "AT1G80820" "AT1G80840" "AT1G80850"
## [624] "AT2G01340" "AT2G01420" "AT2G01450" "AT2G01630" "AT2G01860" "AT2G01890" "AT2G02020"
## [631] "AT2G02310" "AT2G02340" "AT2G02780" "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03310"
## [638] "AT2G03470" "AT2G03750" "AT2G03760" "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450"
## [645] "AT2G05160" "AT2G05260" "AT2G05632" "AT2G05790" "AT2G05940" "AT2G06050" "AT2G06255"
## [652] "AT2G06850" "AT2G07680" "AT2G07690" "AT2G13550" "AT2G13650" "AT2G13960" "AT2G14050"
## [659] "AT2G14290" "AT2G14660" "AT2G14890" "AT2G15760" "AT2G15880" "AT2G15890" "AT2G16720"
## [666] "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17500" "AT2G17720" "AT2G17740" "AT2G17780"
## [673] "AT2G17880" "AT2G18090" "AT2G18196" "AT2G18300" "AT2G18560" "AT2G18690" "AT2G18890"
## [680] "AT2G18917" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20170"
## [687] "AT2G20180" "AT2G20825" "AT2G20880" "AT2G20950" "AT2G21188" "AT2G21350" "AT2G21640"
## [694] "AT2G21780" "AT2G22200" "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22810"
## [701] "AT2G22830" "AT2G22860" "AT2G22890" "AT2G23030" "AT2G23100" "AT2G23110" "AT2G23290"
## [708] "AT2G23340" "AT2G23450" "AT2G23600" "AT2G23760" "AT2G23810" "AT2G24170" "AT2G24210"
## [715] "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25200"
## [722] "AT2G25240" "AT2G25460" "AT2G25470" "AT2G25625" "AT2G25680" "AT2G25790" "AT2G25900"
## [729] "AT2G26480" "AT2G26530" "AT2G26710" "AT2G26870" "AT2G27310" "AT2G27500" "AT2G27505"
## [736] "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28040" "AT2G28050" "AT2G28120" "AT2G28200"
## [743] "AT2G28400" "AT2G28460" "AT2G28570" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950"
## [750] "AT2G29290" "AT2G29320" "AT2G29410" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470"
## [757] "AT2G29670" "AT2G30020" "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395"
## [764] "AT2G30400" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30540" "AT2G30550" "AT2G30720"
## [771] "AT2G30750" "AT2G30820" "AT2G30830" "AT2G30930" "AT2G31150" "AT2G31180" "AT2G31380"
## [778] "AT2G31751" "AT2G31940" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [785] "AT2G32210" "AT2G32235" "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33020"
## [792] "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33380" "AT2G33480" "AT2G33830" "AT2G34010"
## [799] "AT2G34070" "AT2G34080" "AT2G34500" "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34810"
## [806] "AT2G35170" "AT2G35260" "AT2G35290" "AT2G35550" "AT2G35590" "AT2G35700" "AT2G35710"
## [813] "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36050" "AT2G36080" "AT2G36200"
## [820] "AT2G36380" "AT2G36400" "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854"
## [827] "AT2G36970" "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37440" "AT2G37450" "AT2G37590"
## [834] "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870" "AT2G37950" "AT2G37980" "AT2G38240"
## [841] "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38640" "AT2G38750"
## [848] "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39180" "AT2G39210" "AT2G39250" "AT2G39350"
## [855] "AT2G39430" "AT2G39520" "AT2G39580" "AT2G39725" "AT2G39730" "AT2G39800" "AT2G39980"
## [862] "AT2G40100" "AT2G40140" "AT2G40340" "AT2G40435" "AT2G40530" "AT2G40610" "AT2G40620"
## [869] "AT2G40711" "AT2G40750" "AT2G40850" "AT2G41070" "AT2G41250" "AT2G41410" "AT2G41540"
## [876] "AT2G41550" "AT2G41660" "AT2G41730" "AT2G41820" "AT2G41835" "AT2G41870" "AT2G41940"
## [883] "AT2G42040" "AT2G42150" "AT2G42170" "AT2G42300" "AT2G42320" "AT2G42350" "AT2G42380"
## [890] "AT2G42530" "AT2G42540" "AT2G42560" "AT2G42690" "AT2G42760" "AT2G42940" "AT2G42960"
## [897] "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43150" "AT2G43320" "AT2G43445" "AT2G43535"
## [904] "AT2G43550" "AT2G44370" "AT2G44380" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44630"
## [911] "AT2G44740" "AT2G44810" "AT2G44840" "AT2G44940" "AT2G45180" "AT2G45210" "AT2G45760"
## [918] "AT2G45830" "AT2G45850" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [925] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [932] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47440" "AT2G47480" "AT2G47560"
## [939] "AT2G47670" "AT2G47770" "AT2G47780" "AT2G47920" "AT2G47930" "AT2G47950" "AT3G01280"
## [946] "AT3G01290" "AT3G01480" "AT3G01490" "AT3G01830" "AT3G01840" "AT3G02140" "AT3G02150"
## [953] "AT3G02160" "AT3G02370" "AT3G02510" "AT3G02640" "AT3G02875" "AT3G02990" "AT3G03310"
## [960] "AT3G03440" "AT3G03650" "AT3G03820" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060"
## [967] "AT3G04160" "AT3G04181" "AT3G04300" "AT3G04420" "AT3G04630" "AT3G04720" "AT3G04960"
## [974] "AT3G05320" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05740"
## [981] "AT3G05800" "AT3G05810" "AT3G05900" "AT3G05905" "AT3G06020" "AT3G06030" "AT3G06035"
## [988] "AT3G06070" "AT3G06140" "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06740" "AT3G06890"
## [995] "AT3G07010" "AT3G07210" "AT3G07340" "AT3G07350" "AT3G07460" "AT3G07540"
## [ reached getOption("max.print") -- omitted 1228 entries ]
##
## $`A12-V12_up_down`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" "AT1G01470" "AT1G01610" "AT1G01620"
## [8] "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02400"
## [15] "AT1G02405" "AT1G02460" "AT1G02470" "AT1G02920" "AT1G02930" "AT1G03020" "AT1G03210"
## [22] "AT1G03850" "AT1G04220" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07150" "AT1G07370"
## [29] "AT1G07610" "AT1G08200" "AT1G08450" "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420"
## [36] "AT1G09500" "AT1G09530" "AT1G09950" "AT1G10070" "AT1G10370" "AT1G10530" "AT1G10560"
## [43] "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12290" "AT1G12420" "AT1G13420"
## [50] "AT1G13520" "AT1G13740" "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G14880"
## [57] "AT1G15080" "AT1G15100" "AT1G15125" "AT1G15170" "AT1G15180" "AT1G15310" "AT1G15380"
## [64] "AT1G15670" "AT1G15890" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17020" "AT1G17147"
## [71] "AT1G17420" "AT1G17460" "AT1G17940" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G19570"
## [78] "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030" "AT1G20070"
## [85] "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G21120" "AT1G21520" "AT1G21525"
## [92] "AT1G21740" "AT1G22550" "AT1G22770" "AT1G25275" "AT1G25422" "AT1G25425" "AT1G25450"
## [99] "AT1G25500" "AT1G26290" "AT1G26380" "AT1G26420" "AT1G26730" "AT1G26770" "AT1G26800"
## [106] "AT1G26920" "AT1G27030" "AT1G27330" "AT1G27350" "AT1G27640" "AT1G27730" "AT1G28010"
## [113] "AT1G28050" "AT1G28360" "AT1G29330" "AT1G30240" "AT1G30420" "AT1G30860" "AT1G31710"
## [120] "AT1G32210" "AT1G32860" "AT1G32910" "AT1G33030" "AT1G33055" "AT1G33950" "AT1G33960"
## [127] "AT1G34210" "AT1G35670" "AT1G36622" "AT1G43160" "AT1G44350" "AT1G44900" "AT1G47890"
## [134] "AT1G48100" "AT1G48260" "AT1G49450" "AT1G49650" "AT1G50520" "AT1G50640" "AT1G51090"
## [141] "AT1G51500" "AT1G51780" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52030" "AT1G52200"
## [148] "AT1G52720" "AT1G53110" "AT1G53170" "AT1G53620" "AT1G54010" "AT1G54030" "AT1G54040"
## [155] "AT1G54095" "AT1G55260" "AT1G55490" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G56580"
## [162] "AT1G58180" "AT1G58225" "AT1G58270" "AT1G58590" "AT1G59740" "AT1G60190" "AT1G60270"
## [169] "AT1G61110" "AT1G61160" "AT1G61340" "AT1G61810" "AT1G61820" "AT1G62440" "AT1G62790"
## [176] "AT1G62975" "AT1G63040" "AT1G63460" "AT1G64150" "AT1G64380" "AT1G64390" "AT1G64620"
## [183] "AT1G64670" "AT1G65470" "AT1G65486" "AT1G65490" "AT1G65845" "AT1G65860" "AT1G66280"
## [190] "AT1G66345" "AT1G66960" "AT1G67420" "AT1G67520" "AT1G67630" "AT1G67810" "AT1G67980"
## [197] "AT1G68350" "AT1G68500" "AT1G68585" "AT1G69140" "AT1G69295" "AT1G69490" "AT1G69530"
## [204] "AT1G69543" "AT1G69600" "AT1G69720" "AT1G69870" "AT1G70300" "AT1G70640" "AT1G70700"
## [211] "AT1G71970" "AT1G72040" "AT1G72060" "AT1G72070" "AT1G72140" "AT1G72180" "AT1G73210"
## [218] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74590" "AT1G74950"
## [225] "AT1G75170" "AT1G75370" "AT1G75580" "AT1G75800" "AT1G75830" "AT1G76610" "AT1G76790"
## [232] "AT1G76960" "AT1G77145" "AT1G77680" "AT1G77920" "AT1G78060" "AT1G78070" "AT1G78080"
## [239] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79170" "AT1G79450" "AT1G79570"
## [246] "AT1G79960" "AT1G80060" "AT1G80120" "AT1G80460" "AT1G80530" "AT1G80580" "AT1G80820"
## [253] "AT1G80840" "AT1G80850" "AT2G01818" "AT2G01830" "AT2G01890" "AT2G02060" "AT2G02350"
## [260] "AT2G02360" "AT2G02930" "AT2G03760" "AT2G04080" "AT2G04515" "AT2G06050" "AT2G06255"
## [267] "AT2G07690" "AT2G14560" "AT2G14610" "AT2G16630" "AT2G17040" "AT2G17450" "AT2G18660"
## [274] "AT2G18969" "AT2G18970" "AT2G19190" "AT2G20880" "AT2G21140" "AT2G21185" "AT2G21187"
## [281] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23170" "AT2G23340"
## [288] "AT2G23760" "AT2G23840" "AT2G24040" "AT2G24210" "AT2G24240" "AT2G24390" "AT2G25130"
## [295] "AT2G25625" "AT2G26560" "AT2G27389" "AT2G27390" "AT2G27510" "AT2G27660" "AT2G27820"
## [302] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28790" "AT2G28940" "AT2G29350"
## [309] "AT2G29440" "AT2G29450" "AT2G29470" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G29950"
## [316] "AT2G30040" "AT2G30360" "AT2G30362" "AT2G30480" "AT2G30540" "AT2G30820" "AT2G30830"
## [323] "AT2G31020" "AT2G31380" "AT2G31730" "AT2G31865" "AT2G32160" "AT2G32235" "AT2G32240"
## [330] "AT2G32460" "AT2G32510" "AT2G32680" "AT2G32990" "AT2G33380" "AT2G33480" "AT2G33520"
## [337] "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960" "AT2G36380" "AT2G36590"
## [344] "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885" "AT2G37040" "AT2G37170"
## [351] "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G37750" "AT2G38530" "AT2G38540"
## [358] "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39320" "AT2G39980" "AT2G40110"
## [365] "AT2G40550" "AT2G40620" "AT2G40880" "AT2G41082" "AT2G41170" "AT2G41250" "AT2G41380"
## [372] "AT2G41440" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [379] "AT2G43000" "AT2G43018" "AT2G43020" "AT2G43150" "AT2G43535" "AT2G43550" "AT2G44370"
## [386] "AT2G44380" "AT2G44578" "AT2G44640" "AT2G44840" "AT2G44980" "AT2G45470" "AT2G45510"
## [393] "AT2G45960" "AT2G46370" "AT2G46380" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [400] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G02820" "AT3G03190"
## [407] "AT3G03470" "AT3G03610" "AT3G03650" "AT3G03780" "AT3G03980" "AT3G04000" "AT3G04010"
## [414] "AT3G04070" "AT3G04630" "AT3G04720" "AT3G05640" "AT3G05740" "AT3G05800" "AT3G05810"
## [421] "AT3G05870" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G07580"
## [428] "AT3G07600" "AT3G07800" "AT3G08030" "AT3G08670" "AT3G09032" "AT3G09940" "AT3G10320"
## [435] "AT3G10985" "AT3G11000" "AT3G11090" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [442] "AT3G12120" "AT3G12145" "AT3G12220" "AT3G12230" "AT3G12920" "AT3G13230" "AT3G13433"
## [449] "AT3G13437" "AT3G13790" "AT3G14067" "AT3G14280" "AT3G14700" "AT3G14740" "AT3G14870"
## [456] "AT3G15210" "AT3G15518" "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450"
## [463] "AT3G16460" "AT3G16500" "AT3G17120" "AT3G17510" "AT3G17860" "AT3G18250" "AT3G18730"
## [470] "AT3G19390" "AT3G19615" "AT3G19660" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G20340"
## [477] "AT3G21670" "AT3G21780" "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22460" "AT3G22560"
## [484] "AT3G23740" "AT3G23810" "AT3G24518" "AT3G24520" "AT3G25700" "AT3G25760" "AT3G25770"
## [491] "AT3G25780" "AT3G26060" "AT3G26210" "AT3G26220" "AT3G26230" "AT3G26440" "AT3G26470"
## [498] "AT3G26500" "AT3G26520" "AT3G27170" "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28540"
## [505] "AT3G28570" "AT3G28600" "AT3G28850" "AT3G28950" "AT3G29240" "AT3G43250" "AT3G43270"
## [512] "AT3G44300" "AT3G44490" "AT3G44870" "AT3G45140" "AT3G45290" "AT3G45330" "AT3G45860"
## [519] "AT3G45930" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47830" "AT3G47836"
## [526] "AT3G47960" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48490" "AT3G48510" "AT3G48520"
## [533] "AT3G48630" "AT3G48640" "AT3G48720" "AT3G49110" "AT3G49130" "AT3G49540" "AT3G49870"
## [540] "AT3G50260" "AT3G50410" "AT3G50550" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G51250"
## [547] "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920" "AT3G52290" "AT3G52630" "AT3G52748"
## [554] "AT3G53150" "AT3G53235" "AT3G53370" "AT3G53420" "AT3G54150" "AT3G54820" "AT3G54830"
## [561] "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260" "AT3G56270" "AT3G56500"
## [568] "AT3G56870" "AT3G56891" "AT3G57020" "AT3G57157" "AT3G57240" "AT3G57550" "AT3G57760"
## [575] "AT3G59050" "AT3G59052" "AT3G59100" "AT3G59710" "AT3G59940" "AT3G59970" "AT3G60220"
## [582] "AT3G60490" "AT3G60540" "AT3G61198" "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61490"
## [589] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62590" "AT3G62600" "AT3G62700" "AT3G62860"
## [596] "AT3G63030" "AT3G63200" "AT4G00360" "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030"
## [603] "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060" "AT4G02110" "AT4G02360" "AT4G02520"
## [610] "AT4G04620" "AT4G04740" "AT4G04840" "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06534"
## [617] "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08770" "AT4G08870" "AT4G09750" "AT4G10290"
## [624] "AT4G10390" "AT4G10860" "AT4G11070" "AT4G11300" "AT4G11320" "AT4G12000" "AT4G12005"
## [631] "AT4G12030" "AT4G12410" "AT4G13770" "AT4G13860" "AT4G13900" "AT4G14020" "AT4G14040"
## [638] "AT4G14440" "AT4G14800" "AT4G15100" "AT4G15210" "AT4G15530" "AT4G15610" "AT4G15770"
## [645] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G17660"
## [652] "AT4G18360" "AT4G18440" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21060"
## [659] "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21610" "AT4G21730" "AT4G21780" "AT4G21790"
## [666] "AT4G22010" "AT4G22520" "AT4G22620" "AT4G23060" "AT4G23260" "AT4G23271" "AT4G23420"
## [673] "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960" "AT4G24972" "AT4G25000" "AT4G25070"
## [680] "AT4G25433" "AT4G25700" "AT4G25830" "AT4G25900" "AT4G26700" "AT4G27350" "AT4G27410"
## [687] "AT4G27520" "AT4G27590" "AT4G27745" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G28310"
## [694] "AT4G28390" "AT4G28405" "AT4G29740" "AT4G30180" "AT4G30210" "AT4G30440" "AT4G30530"
## [701] "AT4G30640" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780" "AT4G32785" "AT4G32870"
## [708] "AT4G33220" "AT4G33355" "AT4G33467" "AT4G33925" "AT4G33970" "AT4G34060" "AT4G34135"
## [715] "AT4G34200" "AT4G34290" "AT4G34650" "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320"
## [722] "AT4G35480" "AT4G35550" "AT4G35560" "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36710"
## [729] "AT4G36780" "AT4G36900" "AT4G37310" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37520"
## [736] "AT4G37760" "AT4G37990" "AT4G38080" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810"
## [743] "AT4G39190" "AT4G39330" "AT4G39350" "AT4G39580" "AT4G39980" "AT5G01210" "AT5G01215"
## [750] "AT5G01550" "AT5G01610" "AT5G01760" "AT5G01840" "AT5G02170" "AT5G02460" "AT5G02502"
## [757] "AT5G02520" "AT5G02690" "AT5G03030" "AT5G03285" "AT5G04180" "AT5G04200" "AT5G04250"
## [764] "AT5G04530" "AT5G04770" "AT5G05270" "AT5G05300" "AT5G05440" "AT5G06310" "AT5G06570"
## [771] "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07650" "AT5G07660" "AT5G07690" "AT5G07700"
## [778] "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08640" "AT5G08760" "AT5G09290"
## [785] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10390" "AT5G10400" "AT5G10440" "AT5G10720"
## [792] "AT5G11920" "AT5G11950" "AT5G12860" "AT5G13220" "AT5G13400" "AT5G14200" "AT5G14420"
## [799] "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240" "AT5G15860"
## [806] "AT5G15870" "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17330" "AT5G17460"
## [813] "AT5G17490" "AT5G17520" "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20400"
## [820] "AT5G20740" "AT5G20960" "AT5G21280" "AT5G22500" "AT5G22740" "AT5G22880" "AT5G23010"
## [827] "AT5G23420" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155" "AT5G24205"
## [834] "AT5G24206" "AT5G24230" "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780"
## [841] "AT5G24910" "AT5G24920" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26260" "AT5G26731"
## [848] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38005"
## [855] "AT5G38120" "AT5G38130" "AT5G38900" "AT5G39320" "AT5G39520" "AT5G39680" "AT5G39950"
## [862] "AT5G40010" "AT5G40240" "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G40690"
## [869] "AT5G40720" "AT5G41120" "AT5G41160" "AT5G41315" "AT5G41590" "AT5G41600" "AT5G41880"
## [876] "AT5G42530" "AT5G42650" "AT5G42830" "AT5G42900" "AT5G43170" "AT5G43910" "AT5G44050"
## [883] "AT5G44210" "AT5G44420" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G45950" "AT5G46230"
## [890] "AT5G46500" "AT5G47220" "AT5G47240" "AT5G47330" "AT5G48180" "AT5G48290" "AT5G49690"
## [897] "AT5G50460" "AT5G52050" "AT5G52310" "AT5G52720" "AT5G52882" "AT5G52910" "AT5G52990"
## [904] "AT5G53200" "AT5G53760" "AT5G53820" "AT5G54300" "AT5G54490" "AT5G54500" "AT5G54840"
## [911] "AT5G55090" "AT5G55180" "AT5G55460" "AT5G55530" "AT5G56050" "AT5G56120" "AT5G56760"
## [918] "AT5G56870" "AT5G56880" "AT5G57010" "AT5G57100" "AT5G57260" "AT5G57550" "AT5G57800"
## [925] "AT5G58480" "AT5G58840" "AT5G58900" "AT5G59030" "AT5G59050" "AT5G59080" "AT5G59090"
## [932] "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59530" "AT5G59662" "AT5G59760" "AT5G59890"
## [939] "AT5G60530" "AT5G60850" "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61000" "AT5G61070"
## [946] "AT5G61160" "AT5G61460" "AT5G61490" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [953] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63135" "AT5G63240"
## [960] "AT5G63450" "AT5G63550" "AT5G64000" "AT5G64170" "AT5G64190" "AT5G64260" "AT5G64280"
## [967] "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280" "AT5G65350" "AT5G65360"
## [974] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66170" "AT5G66590" "AT5G66650" "AT5G67070"
## [981] "AT5G67100" "AT5G67180" "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"
## [988] "AT5G67600"
##
## $`M1-A1_up`
## [1] "AT3G21870" "ATCG01310"
##
## $`M1-V1_up`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G02710" "AT1G02820" "AT1G03050" "AT1G03055" "AT1G03300" "AT1G03360" "AT1G04220"
## [15] "AT1G04250" "AT1G04530" "AT1G04550" "AT1G04660" "AT1G04770" "AT1G05560" "AT1G05562"
## [22] "AT1G05680" "AT1G07010" "AT1G07180" "AT1G07485" "AT1G07490" "AT1G08610" "AT1G09180"
## [29] "AT1G09820" "AT1G09900" "AT1G10460" "AT1G10960" "AT1G12330" "AT1G12370" "AT1G13030"
## [36] "AT1G13080" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150" "AT1G14345"
## [43] "AT1G14840" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15870" "AT1G16350" "AT1G16390"
## [50] "AT1G16730" "AT1G17050" "AT1G18800" "AT1G19140" "AT1G19150" "AT1G19450" "AT1G19700"
## [57] "AT1G21500" "AT1G22590" "AT1G22850" "AT1G23100" "AT1G23410" "AT1G23740" "AT1G24148"
## [64] "AT1G26220" "AT1G26390" "AT1G26761" "AT1G27120" "AT1G27480" "AT1G28010" "AT1G29600"
## [71] "AT1G29660" "AT1G30960" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760" "AT1G32900"
## [78] "AT1G33170" "AT1G33410" "AT1G42550" "AT1G42970" "AT1G44000" "AT1G44446" "AT1G48100"
## [85] "AT1G48480" "AT1G48570" "AT1G49010" "AT1G49430" "AT1G49490" "AT1G49660" "AT1G50840"
## [92] "AT1G51080" "AT1G51100" "AT1G51310" "AT1G52830" "AT1G53090" "AT1G54500" "AT1G55260"
## [99] "AT1G55960" "AT1G58520" "AT1G59700" "AT1G61300" "AT1G62170" "AT1G62180" "AT1G62630"
## [106] "AT1G62720" "AT1G62750" "AT1G62760" "AT1G62960" "AT1G63250" "AT1G64220" "AT1G64500"
## [113] "AT1G64600" "AT1G64670" "AT1G64680" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [120] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65920" "AT1G66130"
## [127] "AT1G66330" "AT1G66540" "AT1G66725" "AT1G66840" "AT1G67590" "AT1G67750" "AT1G68440"
## [134] "AT1G69200" "AT1G70000" "AT1G70250" "AT1G70580" "AT1G71850" "AT1G72040" "AT1G72270"
## [141] "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870" "AT1G73890"
## [148] "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280" "AT1G76240" "AT1G77580"
## [155] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G80270" "AT1G80760"
## [162] "AT2G01280" "AT2G01890" "AT2G02150" "AT2G02230" "AT2G03550" "AT2G04030" "AT2G04039"
## [169] "AT2G04790" "AT2G05160" "AT2G11890" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G17972"
## [176] "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19670" "AT2G20020" "AT2G20585" "AT2G21185"
## [183] "AT2G21187" "AT2G21320" "AT2G21330" "AT2G22240" "AT2G23290" "AT2G23340" "AT2G23430"
## [190] "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440" "AT2G24540" "AT2G24545" "AT2G24580"
## [197] "AT2G24762" "AT2G24820" "AT2G25530" "AT2G25680" "AT2G26080" "AT2G26692" "AT2G27420"
## [204] "AT2G28790" "AT2G29090" "AT2G30100" "AT2G30150" "AT2G30520" "AT2G30760" "AT2G31380"
## [211] "AT2G31750" "AT2G31751" "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33855"
## [218] "AT2G35760" "AT2G35950" "AT2G36000" "AT2G36590" "AT2G36750" "AT2G36800" "AT2G37240"
## [225] "AT2G37460" "AT2G37630" "AT2G37970" "AT2G38750" "AT2G38760" "AT2G39730" "AT2G41050"
## [232] "AT2G41250" "AT2G41290" "AT2G41660" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43650"
## [239] "AT2G43710" "AT2G45340" "AT2G46670" "AT2G46790" "AT2G46810" "AT2G46830" "AT2G47370"
## [246] "AT2G47450" "AT2G47485" "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180"
## [253] "AT3G01440" "AT3G02830" "AT3G04140" "AT3G04950" "AT3G06145" "AT3G06520" "AT3G06750"
## [260] "AT3G06920" "AT3G07310" "AT3G07750" "AT3G07770" "AT3G09160" "AT3G09162" "AT3G09190"
## [267] "AT3G09600" "AT3G09650" "AT3G10040" "AT3G10110" "AT3G10525" "AT3G11090" "AT3G11110"
## [274] "AT3G12320" "AT3G13470" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15540" "AT3G15850"
## [281] "AT3G15990" "AT3G16520" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840" "AT3G18750"
## [288] "AT3G19000" "AT3G19440" "AT3G19450" "AT3G19480" "AT3G21390" "AT3G21460" "AT3G21890"
## [295] "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G23090" "AT3G23210" "AT3G23510"
## [302] "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190" "AT3G24460" "AT3G25030" "AT3G25670"
## [309] "AT3G26570" "AT3G27350" "AT3G27415" "AT3G27416" "AT3G28040" "AT3G28540" "AT3G30460"
## [316] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G46090" "AT3G46900" "AT3G47070" "AT3G47420"
## [323] "AT3G47430" "AT3G48280" "AT3G48560" "AT3G48660" "AT3G48690" "AT3G49240" "AT3G49470"
## [330] "AT3G49570" "AT3G50685" "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52720" "AT3G52920"
## [337] "AT3G53700" "AT3G53830" "AT3G53920" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [344] "AT3G54720" "AT3G54900" "AT3G56080" "AT3G56160" "AT3G56290" "AT3G56300" "AT3G56330"
## [351] "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180" "AT3G57190" "AT3G57400" "AT3G58840"
## [358] "AT3G58990" "AT3G59220" "AT3G59250" "AT3G59400" "AT3G61220" "AT3G61780" "AT3G61880"
## [365] "AT3G63200" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [372] "AT4G01080" "AT4G01535" "AT4G02630" "AT4G02990" "AT4G03600" "AT4G04020" "AT4G04610"
## [379] "AT4G05110" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620" "AT4G11100"
## [386] "AT4G11175" "AT4G12390" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14440"
## [393] "AT4G14690" "AT4G15210" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550" "AT4G15810"
## [400] "AT4G16140" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16980" "AT4G17180" "AT4G17680"
## [407] "AT4G17880" "AT4G17970" "AT4G19170" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990"
## [414] "AT4G23680" "AT4G23770" "AT4G24540" "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780"
## [421] "AT4G26600" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27700" "AT4G28660" "AT4G28700"
## [428] "AT4G28730" "AT4G28740" "AT4G28780" "AT4G30470" "AT4G30610" "AT4G30960" "AT4G31210"
## [435] "AT4G31390" "AT4G31870" "AT4G32770" "AT4G33010" "AT4G33560" "AT4G34550" "AT4G34610"
## [442] "AT4G34630" "AT4G35090" "AT4G36580" "AT4G36950" "AT4G37650" "AT4G37800" "AT4G37925"
## [449] "AT4G38060" "AT4G38680" "AT4G38960" "AT4G38970" "AT4G39330" "AT4G39470" "AT4G39510"
## [456] "AT4G39800" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [463] "AT5G02180" "AT5G02230" "AT5G02540" "AT5G02830" "AT5G02950" "AT5G03555" "AT5G03760"
## [470] "AT5G05270" "AT5G05580" "AT5G06550" "AT5G06790" "AT5G08610" "AT5G08720" "AT5G08760"
## [477] "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470" "AT5G12080" "AT5G12110" "AT5G13400"
## [484] "AT5G13730" "AT5G13770" "AT5G13920" "AT5G14350" "AT5G14580" "AT5G14610" "AT5G14740"
## [491] "AT5G15600" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340" "AT5G16530"
## [498] "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300"
## [505] "AT5G19730" "AT5G19850" "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380"
## [512] "AT5G21100" "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23730" "AT5G23750" "AT5G23760"
## [519] "AT5G24105" "AT5G24120" "AT5G24150" "AT5G24165" "AT5G24280" "AT5G24380" "AT5G24580"
## [526] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25590" "AT5G25630"
## [533] "AT5G28500" "AT5G38420" "AT5G38430" "AT5G39710" "AT5G43400" "AT5G43630" "AT5G43850"
## [540] "AT5G44190" "AT5G44490" "AT5G45800" "AT5G46220" "AT5G46580" "AT5G47220" "AT5G47360"
## [547] "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48850" "AT5G48910" "AT5G49100" "AT5G49740"
## [554] "AT5G50100" "AT5G51540" "AT5G51720" "AT5G52570" "AT5G53170" "AT5G53200" "AT5G53970"
## [561] "AT5G54130" "AT5G54470" "AT5G54585" "AT5G54610" "AT5G54630" "AT5G55570" "AT5G55730"
## [568] "AT5G55740" "AT5G55790" "AT5G56850" "AT5G56860" "AT5G57030" "AT5G57180" "AT5G57240"
## [575] "AT5G58770" "AT5G58870" "AT5G59780" "AT5G61030" "AT5G61130" "AT5G61350" "AT5G61670"
## [582] "AT5G62130" "AT5G62140" "AT5G62370" "AT5G63530" "AT5G63630" "AT5G63700" "AT5G64170"
## [589] "AT5G64710" "AT5G64840" "AT5G64940" "AT5G65380" "AT5G65820" "AT5G66270" "AT5G66740"
## [596] "AT5G66960" "AT5G67030" "AT5G67370" "AT5G67385" "ATCG00330" "ATCG00905" "ATCG00920"
## [603] "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960" "ATCG00970" "ATCG01130" "ATCG01170"
## [610] "ATCG01190" "ATCG01300" "ATCG01310" "ATMG00030" "ATMG00050" "ATMG01130"
##
## $`A1-V1_up`
## [1] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" "AT1G62170" "AT1G62180" "AT1G64500" "AT2G21320"
## [9] "AT2G24762" "AT2G46830" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [17] "AT4G12390" "AT4G37650" "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280"
## [25] "AT5G47610" "AT5G48570" "AT5G54610" "AT5G58770" "AT5G62140"
##
## $`M6-A6_up`
## [1] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" "AT1G02610" "AT1G02620" "AT1G02820"
## [8] "AT1G03020" "AT1G03130" "AT1G03310" "AT1G03600" "AT1G03610" "AT1G03630" "AT1G04680"
## [15] "AT1G04770" "AT1G05540" "AT1G06040" "AT1G06460" "AT1G06680" "AT1G07050" "AT1G07280"
## [22] "AT1G07440" "AT1G08380" "AT1G08550" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G10020"
## [29] "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11130" "AT1G11180" "AT1G11260"
## [36] "AT1G11290" "AT1G11362" "AT1G11380" "AT1G11925" "AT1G12090" "AT1G12450" "AT1G12500"
## [43] "AT1G12710" "AT1G12730" "AT1G12900" "AT1G13245" "AT1G13650" "AT1G13700" "AT1G13930"
## [50] "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14700" "AT1G14720" "AT1G15040"
## [57] "AT1G15080" "AT1G15150" "AT1G15160" "AT1G15290" "AT1G15550" "AT1G15690" "AT1G15820"
## [64] "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16400" "AT1G16410"
## [71] "AT1G16720" "AT1G16730" "AT1G17100" "AT1G17850" "AT1G17970" "AT1G18000" "AT1G18010"
## [78] "AT1G18265" "AT1G18330" "AT1G18485" "AT1G19150" "AT1G19450" "AT1G19510" "AT1G19715"
## [85] "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20440" "AT1G21500" "AT1G21910"
## [92] "AT1G22190" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22480" "AT1G22490"
## [99] "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590" "AT1G22630" "AT1G22690"
## [106] "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23205" "AT1G23390" "AT1G23400" "AT1G23480"
## [113] "AT1G23740" "AT1G25400" "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26761" "AT1G26800"
## [120] "AT1G27480" "AT1G27950" "AT1G28010" "AT1G28330" "AT1G29090" "AT1G29280" "AT1G29430"
## [127] "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530" "AT1G29600" "AT1G29670"
## [134] "AT1G29680" "AT1G29715" "AT1G30520" "AT1G31173" "AT1G31330" "AT1G31920" "AT1G32060"
## [141] "AT1G32080" "AT1G33170" "AT1G33240" "AT1G33760" "AT1G35140" "AT1G35420" "AT1G36370"
## [148] "AT1G36675" "AT1G42550" "AT1G43670" "AT1G44000" "AT1G44446" "AT1G45010" "AT1G47370"
## [155] "AT1G47440" "AT1G47580" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49380" "AT1G49490"
## [162] "AT1G49650" "AT1G49975" "AT1G49990" "AT1G50040" "AT1G50290" "AT1G50590" "AT1G50732"
## [169] "AT1G51400" "AT1G51402" "AT1G51805" "AT1G51940" "AT1G52230" "AT1G52342" "AT1G52770"
## [176] "AT1G53160" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55480"
## [183] "AT1G56670" "AT1G56720" "AT1G57590" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690"
## [190] "AT1G60800" "AT1G61300" "AT1G61520" "AT1G61795" "AT1G62170" "AT1G62180" "AT1G62510"
## [197] "AT1G62560" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63570" "AT1G63930" "AT1G64355"
## [204] "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900" "AT1G65230" "AT1G65390" "AT1G65590"
## [211] "AT1G66130" "AT1G66230" "AT1G66840" "AT1G66930" "AT1G67265" "AT1G67590" "AT1G67740"
## [218] "AT1G67910" "AT1G68010" "AT1G68050" "AT1G68190" "AT1G68520" "AT1G68540" "AT1G68670"
## [225] "AT1G68830" "AT1G68890" "AT1G69140" "AT1G69890" "AT1G70090" "AT1G70290" "AT1G70580"
## [232] "AT1G70820" "AT1G71000" "AT1G71030" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72270"
## [239] "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72600" "AT1G72610" "AT1G72630" "AT1G72640"
## [246] "AT1G72645" "AT1G73325" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870"
## [253] "AT1G73890" "AT1G74070" "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75250" "AT1G75460"
## [260] "AT1G75690" "AT1G75770" "AT1G75900" "AT1G75960" "AT1G76080" "AT1G76100" "AT1G76110"
## [267] "AT1G76690" "AT1G76955" "AT1G77090" "AT1G77210" "AT1G77630" "AT1G77640" "AT1G78000"
## [274] "AT1G78100" "AT1G78450" "AT1G78600" "AT1G78990" "AT1G78995" "AT1G79330" "AT1G79770"
## [281] "AT1G79780" "AT1G80440" "AT1G80630" "AT1G80920" "AT2G01590" "AT2G01755" "AT2G01760"
## [288] "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02710" "AT2G02950"
## [295] "AT2G02990" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03710" "AT2G04790"
## [302] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05995" "AT2G06520" "AT2G13360"
## [309] "AT2G15020" "AT2G15090" "AT2G15890" "AT2G15970" "AT2G16365" "AT2G16630" "AT2G16660"
## [316] "AT2G17230" "AT2G17695" "AT2G17780" "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18560"
## [323] "AT2G18700" "AT2G18940" "AT2G19310" "AT2G20250" "AT2G20670" "AT2G20680" "AT2G21130"
## [330] "AT2G21140" "AT2G21320" "AT2G21330" "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22810"
## [337] "AT2G22830" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600"
## [344] "AT2G23840" "AT2G24110" "AT2G24550" "AT2G24580" "AT2G24610" "AT2G25130" "AT2G25200"
## [351] "AT2G25270" "AT2G25450" "AT2G25900" "AT2G26080" "AT2G26710" "AT2G26870" "AT2G26975"
## [358] "AT2G27420" "AT2G28120" "AT2G28305" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29170"
## [365] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29450"
## [372] "AT2G29630" "AT2G29650" "AT2G29670" "AT2G30150" "AT2G30390" "AT2G30420" "AT2G30600"
## [379] "AT2G30615" "AT2G30930" "AT2G31360" "AT2G31790" "AT2G32100" "AT2G32179" "AT2G32180"
## [386] "AT2G32290" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32640"
## [393] "AT2G33060" "AT2G33255" "AT2G33330" "AT2G33735" "AT2G33855" "AT2G34410" "AT2G34420"
## [400] "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34760" "AT2G35130" "AT2G35260" "AT2G35660"
## [407] "AT2G35760" "AT2G35960" "AT2G36050" "AT2G36830" "AT2G36990" "AT2G37220" "AT2G37450"
## [414] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37790" "AT2G37950" "AT2G38210" "AT2G38230"
## [421] "AT2G38460" "AT2G38530" "AT2G38540" "AT2G38820" "AT2G39730" "AT2G39880" "AT2G39920"
## [428] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40150" "AT2G40330" "AT2G40540" "AT2G40840"
## [435] "AT2G40960" "AT2G41050" "AT2G41430" "AT2G41480" "AT2G41990" "AT2G42320" "AT2G42380"
## [442] "AT2G42485" "AT2G43010" "AT2G43100" "AT2G43120" "AT2G43550" "AT2G45180" "AT2G45560"
## [449] "AT2G45850" "AT2G46790" "AT2G47440" "AT2G47485" "AT2G47920" "AT3G01060" "AT3G01440"
## [456] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02730" "AT3G03190" "AT3G03480" "AT3G03780"
## [463] "AT3G04445" "AT3G04550" "AT3G04960" "AT3G05625" "AT3G05936" "AT3G06070" "AT3G06145"
## [470] "AT3G06160" "AT3G06520" "AT3G07310" "AT3G07350" "AT3G07500" "AT3G08000" "AT3G08920"
## [477] "AT3G08940" "AT3G09050" "AT3G09160" "AT3G09162" "AT3G09580" "AT3G10020" "AT3G10520"
## [484] "AT3G11110" "AT3G11700" "AT3G12110" "AT3G12520" "AT3G12685" "AT3G13470" "AT3G13750"
## [491] "AT3G14200" "AT3G14415" "AT3G14850" "AT3G15354" "AT3G15450" "AT3G15500" "AT3G15570"
## [498] "AT3G15720" "AT3G15850" "AT3G16175" "AT3G16250" "AT3G16350" "AT3G17170" "AT3G17350"
## [505] "AT3G17470" "AT3G17640" "AT3G17930" "AT3G18080" "AT3G18710" "AT3G18750" "AT3G18773"
## [512] "AT3G19000" "AT3G19002" "AT3G19480" "AT3G19680" "AT3G19690" "AT3G19700" "AT3G19930"
## [519] "AT3G20350" "AT3G20470" "AT3G20480" "AT3G20640" "AT3G20680" "AT3G20820" "AT3G21352"
## [526] "AT3G21460" "AT3G21755" "AT3G21760" "AT3G21870" "AT3G22150" "AT3G22420" "AT3G22760"
## [533] "AT3G23080" "AT3G23450" "AT3G23810" "AT3G23880" "AT3G24030" "AT3G24430" "AT3G24460"
## [540] "AT3G25410" "AT3G25717" "AT3G25760" "AT3G26280" "AT3G26290" "AT3G26320" "AT3G26490"
## [547] "AT3G26510" "AT3G26570" "AT3G26740" "AT3G27690" "AT3G28070" "AT3G28200" "AT3G28420"
## [554] "AT3G29035" "AT3G29185" "AT3G29320" "AT3G44020" "AT3G44990" "AT3G45230" "AT3G45430"
## [561] "AT3G45780" "AT3G45970" "AT3G46130" "AT3G46370" "AT3G46580" "AT3G46630" "AT3G46640"
## [568] "AT3G46970" "AT3G47070" "AT3G47430" "AT3G47470" "AT3G47500" "AT3G47750" "AT3G48200"
## [575] "AT3G48280" "AT3G48350" "AT3G48420" "AT3G48460" "AT3G48720" "AT3G49470" "AT3G49570"
## [582] "AT3G49580" "AT3G49790" "AT3G49930" "AT3G50060" "AT3G50120" "AT3G50685" "AT3G50840"
## [589] "AT3G51080" "AT3G51400" "AT3G51420" "AT3G51510" "AT3G51600" "AT3G52070" "AT3G52072"
## [596] "AT3G52840" "AT3G53420" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54050" "AT3G54060"
## [603] "AT3G54500" "AT3G54600" "AT3G54830" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630"
## [610] "AT3G55646" "AT3G55760" "AT3G55800" "AT3G56000" "AT3G56160" "AT3G56290" "AT3G56360"
## [617] "AT3G57020" "AT3G57190" "AT3G57765" "AT3G58200" "AT3G58620" "AT3G58990" "AT3G59060"
## [624] "AT3G59120" "AT3G59250" "AT3G59710" "AT3G59940" "AT3G60290" "AT3G60390" "AT3G61060"
## [631] "AT3G61220" "AT3G61870" "AT3G61900" "AT3G62410" "AT3G62550" "AT3G62630" "AT3G62750"
## [638] "AT3G62860" "AT3G62950" "AT3G63160" "AT4G00165" "AT4G00360" "AT4G00370" "AT4G01130"
## [645] "AT4G01330" "AT4G01670" "AT4G01985" "AT4G02630" "AT4G02770" "AT4G03400" "AT4G03510"
## [652] "AT4G04330" "AT4G04340" "AT4G04610" "AT4G04745" "AT4G04810" "AT4G04830" "AT4G04840"
## [659] "AT4G05070" "AT4G06534" "AT4G06536" "AT4G07400" "AT4G09350" "AT4G09650" "AT4G09670"
## [666] "AT4G09760" "AT4G10120" "AT4G10290" "AT4G10340" "AT4G11360" "AT4G11521" "AT4G12310"
## [673] "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12420" "AT4G12730" "AT4G12830" "AT4G12900"
## [680] "AT4G12917" "AT4G12980" "AT4G13340" "AT4G13810" "AT4G13830" "AT4G14270" "AT4G14358"
## [687] "AT4G14540" "AT4G14740" "AT4G15210" "AT4G15450" "AT4G15630" "AT4G15670" "AT4G16563"
## [694] "AT4G16740" "AT4G16980" "AT4G17090" "AT4G17340" "AT4G17360" "AT4G17460" "AT4G17810"
## [701] "AT4G18210" "AT4G18240" "AT4G18980" "AT4G19170" "AT4G19420" "AT4G19530" "AT4G20140"
## [708] "AT4G20260" "AT4G20820" "AT4G20840" "AT4G20860" "AT4G21280" "AT4G21445" "AT4G21870"
## [715] "AT4G21880" "AT4G21990" "AT4G23890" "AT4G24090" "AT4G24130" "AT4G24230" "AT4G24350"
## [722] "AT4G24660" "AT4G24670" "AT4G24700" "AT4G24810" "AT4G25050" "AT4G25080" "AT4G25470"
## [729] "AT4G25480" "AT4G25780" "AT4G25810" "AT4G26150" "AT4G26370" "AT4G26520" "AT4G26530"
## [736] "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27450" "AT4G27700" "AT4G27720" "AT4G27730"
## [743] "AT4G27820" "AT4G28703" "AT4G28740" "AT4G29190" "AT4G29905" "AT4G30250" "AT4G31850"
## [750] "AT4G32340" "AT4G32350" "AT4G32480" "AT4G32770" "AT4G32800" "AT4G32980" "AT4G33000"
## [757] "AT4G33010" "AT4G33220" "AT4G33467" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34090"
## [764] "AT4G34220" "AT4G34250" "AT4G34730" "AT4G34900" "AT4G34950" "AT4G35090" "AT4G35320"
## [771] "AT4G36040" "AT4G36410" "AT4G36530" "AT4G36670" "AT4G37240" "AT4G37260" "AT4G37450"
## [778] "AT4G37610" "AT4G37800" "AT4G37925" "AT4G38400" "AT4G38430" "AT4G38470" "AT4G38770"
## [785] "AT4G38840" "AT4G39330" "AT4G39710" "AT4G39770" "AT5G01015" "AT5G01410" "AT5G01520"
## [792] "AT5G02010" "AT5G02120" "AT5G02160" "AT5G02180" "AT5G02810" "AT5G02830" "AT5G02950"
## [799] "AT5G03285" "AT5G04190" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05740" "AT5G05890"
## [806] "AT5G06220" "AT5G06690" "AT5G06790" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [813] "AT5G08720" "AT5G09440" "AT5G09660" "AT5G09820" "AT5G10150" "AT5G10470" "AT5G10690"
## [820] "AT5G11070" "AT5G11160" "AT5G11410" "AT5G11580" "AT5G11610" "AT5G12050" "AT5G12080"
## [827] "AT5G12110" "AT5G12420" "AT5G12950" "AT5G13630" "AT5G13730" "AT5G14200" "AT5G14360"
## [834] "AT5G14740" "AT5G15350" "AT5G16370" "AT5G16400" "AT5G16810" "AT5G17670" "AT5G18030"
## [841] "AT5G18080" "AT5G18570" "AT5G18670" "AT5G19100" "AT5G19120" "AT5G19140" "AT5G19190"
## [848] "AT5G19730" "AT5G19940" "AT5G20225" "AT5G20250" "AT5G20670" "AT5G20740" "AT5G20935"
## [855] "AT5G21100" "AT5G21222" "AT5G21430" "AT5G21930" "AT5G21940" "AT5G22640" "AT5G22920"
## [862] "AT5G23010" "AT5G23060" "AT5G23210" "AT5G23360" "AT5G23870" "AT5G23920" "AT5G23980"
## [869] "AT5G24000" "AT5G24030" "AT5G24120" "AT5G24150" "AT5G24155" "AT5G24160" "AT5G24460"
## [876] "AT5G24470" "AT5G24490" "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140"
## [883] "AT5G25190" "AT5G25210" "AT5G25240" "AT5G25610" "AT5G25630" "AT5G26220" "AT5G26230"
## [890] "AT5G26820" "AT5G27290" "AT5G27350" "AT5G27390" "AT5G28020" "AT5G28030" "AT5G28500"
## [897] "AT5G28610" "AT5G28640" "AT5G28770" "AT5G35170" "AT5G35790" "AT5G36002" "AT5G38290"
## [904] "AT5G38410" "AT5G38510" "AT5G38520" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860"
## [911] "AT5G40380" "AT5G40890" "AT5G41050" "AT5G41080" "AT5G41590" "AT5G41761" "AT5G41800"
## [918] "AT5G41900" "AT5G42070" "AT5G42200" "AT5G42450" "AT5G43270" "AT5G43750" "AT5G43870"
## [925] "AT5G44005" "AT5G44020" "AT5G44130" "AT5G44190" "AT5G44260" "AT5G44410" "AT5G44600"
## [932] "AT5G45650" "AT5G45680" "AT5G45820" "AT5G45830" "AT5G46220" "AT5G46580" "AT5G46600"
## [939] "AT5G47240" "AT5G47330" "AT5G47370" "AT5G47440" "AT5G47900" "AT5G48545" "AT5G48850"
## [946] "AT5G48910" "AT5G49390" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49740" "AT5G50450"
## [953] "AT5G50950" "AT5G51390" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G51950" "AT5G51970"
## [960] "AT5G52100" "AT5G52120" "AT5G52310" "AT5G52970" "AT5G54145" "AT5G54148" "AT5G54170"
## [967] "AT5G54270" "AT5G54300" "AT5G54585" "AT5G54980" "AT5G55180" "AT5G55740" "AT5G56100"
## [974] "AT5G56544" "AT5G56550" "AT5G56850" "AT5G57100" "AT5G57170" "AT5G57340" "AT5G57550"
## [981] "AT5G57560" "AT5G57630" "AT5G57660" "AT5G57800" "AT5G57880" "AT5G57887" "AT5G58260"
## [988] "AT5G58310" "AT5G58770" "AT5G58900" "AT5G59130" "AT5G59310" "AT5G59730" "AT5G59750"
## [995] "AT5G60400" "AT5G60680" "AT5G61350" "AT5G61590" "AT5G61890" "AT5G62140"
## [ reached getOption("max.print") -- omitted 30 entries ]
##
## $`M6-V6_up`
## [1] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" "AT1G03130" "AT1G03600" "AT1G03630"
## [8] "AT1G03680" "AT1G04250" "AT1G04770" "AT1G05675" "AT1G06040" "AT1G06460" "AT1G06680"
## [15] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G08380" "AT1G09310" "AT1G09340" "AT1G09350"
## [22] "AT1G10020" "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G12090" "AT1G12710"
## [29] "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13245" "AT1G13260" "AT1G13650" "AT1G13930"
## [36] "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700" "AT1G15810"
## [43] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G17147" "AT1G17970"
## [50] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [57] "AT1G19150" "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20340" "AT1G21130" "AT1G21500"
## [64] "AT1G21550" "AT1G21910" "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770"
## [71] "AT1G23390" "AT1G23740" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26800"
## [78] "AT1G27330" "AT1G27480" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510"
## [85] "AT1G29670" "AT1G29910" "AT1G29920" "AT1G30380" "AT1G31330" "AT1G31690" "AT1G32060"
## [92] "AT1G32080" "AT1G32220" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G35140" "AT1G36370"
## [99] "AT1G43310" "AT1G43670" "AT1G44446" "AT1G44575" "AT1G49200" "AT1G50590" "AT1G51080"
## [106] "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51805" "AT1G52200" "AT1G52220"
## [113] "AT1G52230" "AT1G52342" "AT1G52510" "AT1G53163" "AT1G54410" "AT1G54780" "AT1G54790"
## [120] "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55670" "AT1G56300" "AT1G56340"
## [127] "AT1G57590" "AT1G57990" "AT1G59860" "AT1G60800" "AT1G61190" "AT1G61300" "AT1G61520"
## [134] "AT1G62520" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G66130" "AT1G66230"
## [141] "AT1G66910" "AT1G66930" "AT1G67340" "AT1G67590" "AT1G67740" "AT1G67910" "AT1G68050"
## [148] "AT1G68840" "AT1G69140" "AT1G69570" "AT1G69572" "AT1G69830" "AT1G69890" "AT1G70090"
## [155] "AT1G70420" "AT1G70580" "AT1G70820" "AT1G71000" "AT1G71030" "AT1G71970" "AT1G72416"
## [162] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645" "AT1G73470" "AT1G73480"
## [169] "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74730" "AT1G74940"
## [176] "AT1G75280" "AT1G75690" "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76690"
## [183] "AT1G77210" "AT1G78000" "AT1G78600" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79330"
## [190] "AT1G80440" "AT1G80920" "AT2G01008" "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755"
## [197] "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02450" "AT2G03310" "AT2G03410"
## [204] "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04790" "AT2G04795" "AT2G05070"
## [211] "AT2G05100" "AT2G05160" "AT2G06520" "AT2G13360" "AT2G15090" "AT2G15890" "AT2G15970"
## [218] "AT2G16270" "AT2G16365" "AT2G17230" "AT2G17880" "AT2G18160" "AT2G18162" "AT2G18300"
## [225] "AT2G18350" "AT2G18560" "AT2G18700" "AT2G19310" "AT2G21130" "AT2G21320" "AT2G21330"
## [232] "AT2G21970" "AT2G22810" "AT2G22830" "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240"
## [239] "AT2G24550" "AT2G24580" "AT2G24645" "AT2G25200" "AT2G25735" "AT2G25900" "AT2G26150"
## [246] "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27385" "AT2G27420" "AT2G28120" "AT2G28605"
## [253] "AT2G28900" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29360" "AT2G29630"
## [260] "AT2G29650" "AT2G30150" "AT2G30420" "AT2G30570" "AT2G30615" "AT2G31040" "AT2G31945"
## [267] "AT2G32100" "AT2G32500" "AT2G32640" "AT2G33830" "AT2G34410" "AT2G34420" "AT2G34430"
## [274] "AT2G34620" "AT2G35660" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G37530" "AT2G37540"
## [281] "AT2G37585" "AT2G37950" "AT2G38480" "AT2G39400" "AT2G39730" "AT2G39900" "AT2G39980"
## [288] "AT2G40000" "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40330" "AT2G40340" "AT2G40550"
## [295] "AT2G40610" "AT2G40840" "AT2G40960" "AT2G41430" "AT2G42485" "AT2G42530" "AT2G42540"
## [302] "AT2G43010" "AT2G43120" "AT2G44130" "AT2G44490" "AT2G45180" "AT2G45560" "AT2G45850"
## [309] "AT2G46240" "AT2G46790" "AT2G46820" "AT2G46830" "AT2G47920" "AT3G01060" "AT3G01440"
## [316] "AT3G01500" "AT3G01810" "AT3G02550" "AT3G02730" "AT3G04210" "AT3G04300" "AT3G04380"
## [323] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G07200" "AT3G07310" "AT3G07320" "AT3G07350"
## [330] "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440" "AT3G09580" "AT3G10020"
## [337] "AT3G10060" "AT3G10520" "AT3G10720" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G13437"
## [344] "AT3G13470" "AT3G14200" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G16130" "AT3G16250"
## [351] "AT3G17390" "AT3G17640" "AT3G17840" "AT3G18050" "AT3G18080" "AT3G18500" "AT3G18710"
## [358] "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19615" "AT3G19680" "AT3G19690"
## [365] "AT3G21055" "AT3G21780" "AT3G21950" "AT3G22210" "AT3G23880" "AT3G24430" "AT3G24515"
## [372] "AT3G25670" "AT3G26180" "AT3G26290" "AT3G26510" "AT3G26740" "AT3G27690" "AT3G29320"
## [379] "AT3G29330" "AT3G45970" "AT3G46370" "AT3G46630" "AT3G46640" "AT3G46780" "AT3G46970"
## [386] "AT3G47070" "AT3G47460" "AT3G47470" "AT3G47500" "AT3G48200" "AT3G48280" "AT3G48420"
## [393] "AT3G48720" "AT3G49570" "AT3G49580" "AT3G49790" "AT3G50060" "AT3G50820" "AT3G50840"
## [400] "AT3G50920" "AT3G50960" "AT3G51080" "AT3G51400" "AT3G51470" "AT3G51750" "AT3G52070"
## [407] "AT3G52072" "AT3G52180" "AT3G52960" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54490"
## [414] "AT3G54500" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [421] "AT3G56160" "AT3G56290" "AT3G56940" "AT3G57740" "AT3G59060" "AT3G59870" "AT3G59900"
## [428] "AT3G59940" "AT3G60390" "AT3G61060" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870"
## [435] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63140" "AT3G63160" "AT4G00165" "AT4G00970"
## [442] "AT4G01330" "AT4G01670" "AT4G02075" "AT4G02770" "AT4G03400" "AT4G03510" "AT4G04020"
## [449] "AT4G04330" "AT4G04340" "AT4G04810" "AT4G04830" "AT4G05070" "AT4G05180" "AT4G06534"
## [456] "AT4G08950" "AT4G09010" "AT4G09650" "AT4G09750" "AT4G09760" "AT4G10120" "AT4G10340"
## [463] "AT4G11300" "AT4G11360" "AT4G11521" "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12800"
## [470] "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810" "AT4G14270"
## [477] "AT4G14560" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15975" "AT4G16146"
## [484] "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17810" "AT4G18205"
## [491] "AT4G18220" "AT4G19170" "AT4G19530" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445"
## [498] "AT4G21870" "AT4G21990" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23180" "AT4G23800"
## [505] "AT4G23810" "AT4G24240" "AT4G25290" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26520"
## [512] "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27700" "AT4G28240" "AT4G28270"
## [519] "AT4G28703" "AT4G28750" "AT4G29190" "AT4G30650" "AT4G30662" "AT4G32280" "AT4G32340"
## [526] "AT4G32590" "AT4G32980" "AT4G33010" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980"
## [533] "AT4G34220" "AT4G34250" "AT4G34630" "AT4G34900" "AT4G35655" "AT4G36040" "AT4G36530"
## [540] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37925" "AT4G38550" "AT4G38552"
## [547] "AT4G38770" "AT4G39260" "AT4G39580" "AT4G39710" "AT4G39730" "AT5G01015" "AT5G01520"
## [554] "AT5G01530" "AT5G02160" "AT5G02180" "AT5G02760" "AT5G02810" "AT5G02890" "AT5G03285"
## [561] "AT5G03360" "AT5G05090" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05890" "AT5G06220"
## [568] "AT5G06230" "AT5G06290" "AT5G06690" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [575] "AT5G09660" "AT5G10250" "AT5G10340" "AT5G10690" "AT5G11070" "AT5G11242" "AT5G12110"
## [582] "AT5G12950" "AT5G13630" "AT5G13730" "AT5G16350" "AT5G16370" "AT5G16400" "AT5G16810"
## [589] "AT5G18030" "AT5G18080" "AT5G18660" "AT5G19120" "AT5G19190" "AT5G19940" "AT5G20250"
## [596] "AT5G21430" "AT5G21940" "AT5G22920" "AT5G23210" "AT5G23235" "AT5G23240" "AT5G23360"
## [603] "AT5G24120" "AT5G24155" "AT5G24300" "AT5G24460" "AT5G24470" "AT5G24660" "AT5G24890"
## [610] "AT5G25130" "AT5G25240" "AT5G25280" "AT5G26220" "AT5G26230" "AT5G27290" "AT5G28610"
## [617] "AT5G28630" "AT5G28910" "AT5G35480" "AT5G35970" "AT5G38410" "AT5G38510" "AT5G38980"
## [624] "AT5G38990" "AT5G39020" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860" "AT5G40500"
## [631] "AT5G41050" "AT5G41761" "AT5G42200" "AT5G43440" "AT5G43750" "AT5G44005" "AT5G44060"
## [638] "AT5G44070" "AT5G44260" "AT5G44410" "AT5G44680" "AT5G45670" "AT5G45680" "AT5G45820"
## [645] "AT5G45830" "AT5G46110" "AT5G46220" "AT5G46600" "AT5G47370" "AT5G48545" "AT5G48570"
## [652] "AT5G48850" "AT5G48880" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49900" "AT5G50450"
## [659] "AT5G50740" "AT5G51460" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G52100" "AT5G54145"
## [666] "AT5G54148" "AT5G54270" "AT5G54280" "AT5G54585" "AT5G54770" "AT5G55740" "AT5G56010"
## [673] "AT5G56100" "AT5G56544" "AT5G56550" "AT5G57170" "AT5G57560" "AT5G57660" "AT5G58310"
## [680] "AT5G59130" "AT5G60100" "AT5G60270" "AT5G60400" "AT5G60680" "AT5G61160" "AT5G61270"
## [687] "AT5G61350" "AT5G61440" "AT5G61590" "AT5G61600" "AT5G62140" "AT5G62280" "AT5G62430"
## [694] "AT5G62720" "AT5G62730" "AT5G63140" "AT5G63380" "AT5G63700" "AT5G63780" "AT5G63820"
## [701] "AT5G64040" "AT5G64170" "AT5G64190" "AT5G65207" "AT5G66520" "AT5G66570" "AT5G66580"
## [708] "AT5G67370" "AT5G67420" "ATCG00010" "ATCG00020" "ATCG00140" "ATCG00270" "ATCG00280"
## [715] "ATCG00330" "ATCG00340" "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00680" "ATCG00710"
## [722] "ATCG00720" "ATCG00730" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960"
## [729] "ATCG00970" "ATCG01060" "ATCG01160" "ATCG01170" "ATCG01180" "ATCG01190" "ATCG01200"
## [736] "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00030"
##
## $`A6-V6_up`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04490" "AT1G05010"
## [15] "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148" "AT1G06360" "AT1G08050"
## [22] "AT1G08860" "AT1G10230" "AT1G11310" "AT1G11330" "AT1G11905" "AT1G12210" "AT1G13110"
## [29] "AT1G13310" "AT1G13550" "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G17147"
## [36] "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19960" "AT1G21250"
## [43] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400" "AT1G22770" "AT1G23200" "AT1G25370"
## [50] "AT1G27100" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420" "AT1G31280" "AT1G31290"
## [57] "AT1G31690" "AT1G32920" "AT1G32940" "AT1G32960" "AT1G33800" "AT1G35210" "AT1G35230"
## [64] "AT1G43310" "AT1G43910" "AT1G44900" "AT1G51660" "AT1G52200" "AT1G53620" "AT1G53625"
## [71] "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990" "AT1G59865"
## [78] "AT1G61140" "AT1G61370" "AT1G63750" "AT1G63820" "AT1G64710" "AT1G66550" "AT1G66600"
## [85] "AT1G67635" "AT1G67800" "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G70420"
## [92] "AT1G70690" "AT1G71100" "AT1G72930" "AT1G73805" "AT1G74710" "AT1G75830" "AT1G76970"
## [99] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G02930" "AT2G04040" "AT2G04070" "AT2G04430"
## [106] "AT2G04450" "AT2G05070" "AT2G07687" "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480"
## [113] "AT2G16440" "AT2G18660" "AT2G20110" "AT2G21510" "AT2G21790" "AT2G23810" "AT2G24160"
## [120] "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25737" "AT2G26150" "AT2G26240" "AT2G26440"
## [127] "AT2G26560" "AT2G28210" "AT2G28570" "AT2G28890" "AT2G29720" "AT2G31018" "AT2G31020"
## [134] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34500" "AT2G36470" "AT2G37560" "AT2G37940"
## [141] "AT2G37980" "AT2G38790" "AT2G39110" "AT2G40340" "AT2G40550" "AT2G41380" "AT2G41835"
## [148] "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130" "AT2G47140"
## [155] "AT2G47730" "AT3G01290" "AT3G02840" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G07195"
## [162] "AT3G07720" "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11840" "AT3G13080"
## [169] "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G15356" "AT3G16510" "AT3G19010"
## [176] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21780" "AT3G22370" "AT3G22910" "AT3G23530"
## [183] "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600" "AT3G26830" "AT3G28580"
## [190] "AT3G28930" "AT3G29240" "AT3G29400" "AT3G41768" "AT3G44350" "AT3G44830" "AT3G45260"
## [197] "AT3G46520" "AT3G46940" "AT3G47540" "AT3G47820" "AT3G48090" "AT3G48640" "AT3G48850"
## [204] "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150" "AT3G55470"
## [211] "AT3G55500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57700" "AT3G60190" "AT3G60420"
## [218] "AT3G60450" "AT3G60966" "AT3G61760" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895"
## [225] "AT4G01950" "AT4G02380" "AT4G02420" "AT4G02550" "AT4G05030" "AT4G09300" "AT4G09570"
## [232] "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G13180" "AT4G14220" "AT4G14368"
## [239] "AT4G14610" "AT4G15070" "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660"
## [246] "AT4G21380" "AT4G21840" "AT4G21903" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010"
## [253] "AT4G23170" "AT4G23180" "AT4G23250" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25900"
## [260] "AT4G27745" "AT4G28390" "AT4G29440" "AT4G30280" "AT4G30640" "AT4G33925" "AT4G33930"
## [267] "AT4G34135" "AT4G34390" "AT4G35180" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370"
## [274] "AT4G37390" "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640"
## [281] "AT5G01980" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650" "AT5G08335"
## [288] "AT5G08790" "AT5G10390" "AT5G10440" "AT5G12930" "AT5G12940" "AT5G13190" "AT5G14760"
## [295] "AT5G17380" "AT5G17780" "AT5G18470" "AT5G20400" "AT5G20960" "AT5G22060" "AT5G22300"
## [302] "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205" "AT5G24206" "AT5G24910" "AT5G25250"
## [309] "AT5G25930" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990" "AT5G39020" "AT5G39040"
## [316] "AT5G39680" "AT5G41180" "AT5G41730" "AT5G41880" "AT5G42380" "AT5G42440" "AT5G43910"
## [323] "AT5G44070" "AT5G44635" "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830"
## [330] "AT5G52020" "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52910" "AT5G54470"
## [337] "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860" "AT5G55450" "AT5G56960"
## [344] "AT5G59720" "AT5G60280" "AT5G60900" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62770"
## [351] "AT5G64170" "AT5G64810" "AT5G64870" "AT5G66640" "AT5G66890" "AT5G67340" "ATCG00020"
## [358] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [365] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [372] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [379] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [386] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $`M12-A12_up`
## [1] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01430" "AT1G01590" "AT1G01610"
## [8] "AT1G01620" "AT1G02640" "AT1G02650" "AT1G02700" "AT1G02710" "AT1G03300" "AT1G03600"
## [15] "AT1G03630" "AT1G03680" "AT1G03870" "AT1G04040" "AT1G04160" "AT1G04360" "AT1G04420"
## [22] "AT1G05310" "AT1G05420" "AT1G06160" "AT1G06240" "AT1G06250" "AT1G06260" "AT1G06265"
## [29] "AT1G06460" "AT1G06680" "AT1G06850" "AT1G07110" "AT1G07320" "AT1G07440" "AT1G07485"
## [36] "AT1G07490" "AT1G07880" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08810" "AT1G09340"
## [43] "AT1G09440" "AT1G09750" "AT1G10380" "AT1G10657" "AT1G10910" "AT1G10960" "AT1G11000"
## [50] "AT1G11130" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11860" "AT1G11925" "AT1G12060"
## [57] "AT1G12090" "AT1G12250" "AT1G12500" "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150"
## [64] "AT1G13250" "AT1G13380" "AT1G13650" "AT1G13790" "AT1G14030" "AT1G14150" "AT1G14160"
## [71] "AT1G14180" "AT1G14185" "AT1G14270" "AT1G14345" "AT1G14440" "AT1G14687" "AT1G14700"
## [78] "AT1G14720" "AT1G14900" "AT1G15000" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180"
## [85] "AT1G15260" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15690" "AT1G15820" "AT1G15980"
## [92] "AT1G15990" "AT1G16080" "AT1G16410" "AT1G16720" "AT1G17100" "AT1G17200" "AT1G17650"
## [99] "AT1G17850" "AT1G18000" "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18620"
## [106] "AT1G18650" "AT1G18735" "AT1G19150" "AT1G19220" "AT1G19350" "AT1G19450" "AT1G20010"
## [113] "AT1G20020" "AT1G20190" "AT1G20340" "AT1G20470" "AT1G20823" "AT1G21100" "AT1G21500"
## [120] "AT1G21680" "AT1G21880" "AT1G21910" "AT1G22330" "AT1G22370" "AT1G22550" "AT1G22590"
## [127] "AT1G22850" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205" "AT1G23340" "AT1G23470"
## [134] "AT1G23480" "AT1G23530" "AT1G23740" "AT1G23935" "AT1G23940" "AT1G24577" "AT1G25240"
## [141] "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26250" "AT1G26761" "AT1G26810" "AT1G27020"
## [148] "AT1G27210" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G29090" "AT1G29430"
## [155] "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29660"
## [162] "AT1G29670" "AT1G29680" "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980"
## [169] "AT1G30020" "AT1G30360" "AT1G30380" "AT1G30520" "AT1G30760" "AT1G30840" "AT1G31173"
## [176] "AT1G31330" "AT1G31710" "AT1G31835" "AT1G31950" "AT1G32060" "AT1G32080" "AT1G32200"
## [183] "AT1G32220" "AT1G32470" "AT1G32540" "AT1G32550" "AT1G32760" "AT1G32860" "AT1G32990"
## [190] "AT1G33240" "AT1G33440" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G35140" "AT1G35420"
## [197] "AT1G35680" "AT1G36675" "AT1G42970" "AT1G44575" "AT1G45163" "AT1G45165" "AT1G45545"
## [204] "AT1G46480" "AT1G47440" "AT1G47670" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49230"
## [211] "AT1G49320" "AT1G49380" "AT1G49650" "AT1G49730" "AT1G50450" "AT1G50732" "AT1G50900"
## [218] "AT1G50910" "AT1G51080" "AT1G51110" "AT1G51940" "AT1G52000" "AT1G52190" "AT1G52230"
## [225] "AT1G52240" "AT1G53230" "AT1G53233" "AT1G53250" "AT1G53300" "AT1G53700" "AT1G54730"
## [232] "AT1G54740" "AT1G54780" "AT1G54820" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490"
## [239] "AT1G55670" "AT1G56210" "AT1G56430" "AT1G56500" "AT1G56710" "AT1G56720" "AT1G57943"
## [246] "AT1G58150" "AT1G58370" "AT1G59840" "AT1G60000" "AT1G60160" "AT1G60390" "AT1G60550"
## [253] "AT1G60590" "AT1G60600" "AT1G60690" "AT1G60700" "AT1G60800" "AT1G60950" "AT1G61240"
## [260] "AT1G61520" "AT1G61550" "AT1G61795" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62750"
## [267] "AT1G62760" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63400" "AT1G63480" "AT1G64150"
## [274] "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64625" "AT1G64680" "AT1G64720" "AT1G64770"
## [281] "AT1G65230" "AT1G65590" "AT1G65860" "AT1G65900" "AT1G66100" "AT1G66130" "AT1G66140"
## [288] "AT1G66180" "AT1G66810" "AT1G66820" "AT1G67040" "AT1G67090" "AT1G67590" "AT1G67700"
## [295] "AT1G67740" "AT1G67750" "AT1G68010" "AT1G68190" "AT1G68238" "AT1G68400" "AT1G68520"
## [302] "AT1G68530" "AT1G68560" "AT1G68810" "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940"
## [309] "AT1G69140" "AT1G69530" "AT1G70280" "AT1G70370" "AT1G70410" "AT1G70430" "AT1G70460"
## [316] "AT1G70500" "AT1G70760" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71870" "AT1G72140"
## [323] "AT1G72270" "AT1G72310" "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72810"
## [330] "AT1G73066" "AT1G73110" "AT1G73325" "AT1G73590" "AT1G73830" "AT1G74070" "AT1G74370"
## [337] "AT1G74470" "AT1G74670" "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75250" "AT1G75360"
## [344] "AT1G75388" "AT1G75390" "AT1G75500" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [351] "AT1G75800" "AT1G76610" "AT1G77131" "AT1G77210" "AT1G77400" "AT1G77490" "AT1G77630"
## [358] "AT1G78020" "AT1G78060" "AT1G78320" "AT1G78450" "AT1G78460" "AT1G78820" "AT1G78830"
## [365] "AT1G78860" "AT1G78970" "AT1G78995" "AT1G79060" "AT1G79760" "AT1G79770" "AT1G80030"
## [372] "AT1G80080" "AT1G80520" "AT1G80530" "AT1G80630" "AT1G80640" "AT1G80690" "AT2G01420"
## [379] "AT2G01590" "AT2G01630" "AT2G01760" "AT2G01990" "AT2G02020" "AT2G02780" "AT2G02950"
## [386] "AT2G02980" "AT2G03090" "AT2G03420" "AT2G03750" "AT2G04380" "AT2G04780" "AT2G04790"
## [393] "AT2G05070" "AT2G05160" "AT2G05790" "AT2G05914" "AT2G05995" "AT2G06850" "AT2G10940"
## [400] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13820" "AT2G14800" "AT2G14880" "AT2G14890"
## [407] "AT2G15090" "AT2G15440" "AT2G15880" "AT2G16270" "AT2G16630" "AT2G17230" "AT2G17740"
## [414] "AT2G17780" "AT2G18300" "AT2G18560" "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170"
## [421] "AT2G19620" "AT2G19930" "AT2G20180" "AT2G20210" "AT2G20290" "AT2G20340" "AT2G20680"
## [428] "AT2G20890" "AT2G21050" "AT2G21080" "AT2G21140" "AT2G21330" "AT2G21660" "AT2G21830"
## [435] "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23590"
## [442] "AT2G23600" "AT2G24060" "AT2G24090" "AT2G24150" "AT2G24170" "AT2G24280" "AT2G24350"
## [449] "AT2G24580" "AT2G24610" "AT2G24762" "AT2G25270" "AT2G25470" "AT2G25790" "AT2G25840"
## [456] "AT2G25900" "AT2G26080" "AT2G26250" "AT2G26330" "AT2G26640" "AT2G26710" "AT2G26870"
## [463] "AT2G26900" "AT2G26910" "AT2G27040" "AT2G27060" "AT2G27130" "AT2G27190" "AT2G27385"
## [470] "AT2G27810" "AT2G28000" "AT2G28040" "AT2G28050" "AT2G28140" "AT2G28315" "AT2G28460"
## [477] "AT2G28790" "AT2G28810" "AT2G28870" "AT2G28930" "AT2G28950" "AT2G29050" "AT2G29290"
## [484] "AT2G29310" "AT2G29320" "AT2G29550" "AT2G29630" "AT2G30170" "AT2G30420" "AT2G30760"
## [491] "AT2G30766" "AT2G30790" "AT2G30820" "AT2G30830" "AT2G31170" "AT2G31790" "AT2G31902"
## [498] "AT2G32100" "AT2G32179" "AT2G32180" "AT2G32560" "AT2G32640" "AT2G33060" "AT2G33250"
## [505] "AT2G33330" "AT2G33570" "AT2G33735" "AT2G33860" "AT2G34060" "AT2G34170" "AT2G34180"
## [512] "AT2G34190" "AT2G34420" "AT2G34430" "AT2G34490" "AT2G34510" "AT2G34620" "AT2G34680"
## [519] "AT2G34930" "AT2G34980" "AT2G35130" "AT2G35190" "AT2G35260" "AT2G35500" "AT2G35590"
## [526] "AT2G35637" "AT2G35640" "AT2G35859" "AT2G35860" "AT2G35960" "AT2G36000" "AT2G36050"
## [533] "AT2G36110" "AT2G36200" "AT2G36570" "AT2G36815" "AT2G36830" "AT2G36990" "AT2G37090"
## [540] "AT2G37170" "AT2G37180" "AT2G37220" "AT2G37450" "AT2G37640" "AT2G37950" "AT2G38050"
## [547] "AT2G38080" "AT2G38120" "AT2G38170" "AT2G38210" "AT2G38460" "AT2G38530" "AT2G38540"
## [554] "AT2G39130" "AT2G39140" "AT2G39190" "AT2G39430" "AT2G39470" "AT2G39700" "AT2G39730"
## [561] "AT2G39870" "AT2G40008" "AT2G40480" "AT2G40540" "AT2G40610" "AT2G40690" "AT2G40815"
## [568] "AT2G41290" "AT2G41480" "AT2G41550" "AT2G41720" "AT2G41820" "AT2G41990" "AT2G42170"
## [575] "AT2G42290" "AT2G42300" "AT2G42320" "AT2G42380" "AT2G42870" "AT2G42940" "AT2G42980"
## [582] "AT2G43100" "AT2G43120" "AT2G43360" "AT2G43445" "AT2G44230" "AT2G44740" "AT2G44920"
## [589] "AT2G45050" "AT2G45180" "AT2G45340" "AT2G45470" "AT2G45560" "AT2G45850" "AT2G45870"
## [596] "AT2G45960" "AT2G46250" "AT2G46630" "AT2G46820" "AT2G47370" "AT2G47440" "AT2G47590"
## [603] "AT2G47840" "AT2G47930" "AT2G47940" "AT3G01060" "AT3G01440" "AT3G01480" "AT3G01490"
## [610] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02640" "AT3G02730" "AT3G03780" "AT3G03820"
## [617] "AT3G03980" "AT3G04140" "AT3G04160" "AT3G04550" "AT3G04960" "AT3G05190" "AT3G05620"
## [624] "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06145" "AT3G06160" "AT3G06433"
## [631] "AT3G06750" "AT3G06770" "AT3G07010" "AT3G07200" "AT3G07210" "AT3G07320" "AT3G07460"
## [638] "AT3G07540" "AT3G08030" "AT3G08600" "AT3G08920" "AT3G08940" "AT3G09035" "AT3G09160"
## [645] "AT3G09162" "AT3G09580" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10080" "AT3G10150"
## [652] "AT3G10160" "AT3G10200" "AT3G10340" "AT3G10840" "AT3G11110" "AT3G11700" "AT3G12110"
## [659] "AT3G12520" "AT3G12610" "AT3G12780" "AT3G13000" "AT3G13065" "AT3G13120" "AT3G13180"
## [666] "AT3G13240" "AT3G13470" "AT3G13510" "AT3G13750" "AT3G14210" "AT3G14240" "AT3G14310"
## [673] "AT3G14330" "AT3G14350" "AT3G14415" "AT3G14420" "AT3G15030" "AT3G15110" "AT3G15354"
## [680] "AT3G15530" "AT3G15570" "AT3G15680" "AT3G15720" "AT3G15800" "AT3G15850" "AT3G16180"
## [687] "AT3G16240" "AT3G16250" "AT3G16370" "AT3G16520" "AT3G16530" "AT3G16660" "AT3G16850"
## [694] "AT3G17350" "AT3G17640" "AT3G17830" "AT3G18050" "AT3G18080" "AT3G18090" "AT3G18110"
## [701] "AT3G18530" "AT3G18670" "AT3G18710" "AT3G18773" "AT3G18800" "AT3G18850" "AT3G18890"
## [708] "AT3G19002" "AT3G19120" "AT3G19480" "AT3G19710" "AT3G19850" "AT3G20015" "AT3G20260"
## [715] "AT3G20350" "AT3G20640" "AT3G20760" "AT3G20810" "AT3G20820" "AT3G21260" "AT3G21352"
## [722] "AT3G21460" "AT3G21870" "AT3G22120" "AT3G22121" "AT3G22142" "AT3G22150" "AT3G22790"
## [729] "AT3G22810" "AT3G23450" "AT3G23700" "AT3G23730" "AT3G23760" "AT3G23810" "AT3G23870"
## [736] "AT3G23880" "AT3G24255" "AT3G24400" "AT3G24430" "AT3G24480" "AT3G25130" "AT3G25410"
## [743] "AT3G25500" "AT3G25700" "AT3G25805" "AT3G25920" "AT3G26060" "AT3G26240" "AT3G26310"
## [750] "AT3G26320" "AT3G26445" "AT3G26510" "AT3G26520" "AT3G26570" "AT3G26650" "AT3G26932"
## [757] "AT3G27030" "AT3G27660" "AT3G27850" "AT3G27900" "AT3G28040" "AT3G28070" "AT3G28080"
## [764] "AT3G28130" "AT3G28200" "AT3G28860" "AT3G29185" "AT3G29320" "AT3G29670" "AT3G30720"
## [771] "AT3G42670" "AT3G43790" "AT3G44990" "AT3G45010" "AT3G45230" "AT3G45420" "AT3G45430"
## [778] "AT3G45940" "AT3G46130" "AT3G46370" "AT3G46550" "AT3G46580" "AT3G46780" "AT3G46900"
## [785] "AT3G46970" "AT3G47400" "AT3G48200" "AT3G48420" "AT3G48460" "AT3G48610" "AT3G48720"
## [792] "AT3G49260" "AT3G49290" "AT3G49670" "AT3G49740" "AT3G50120" "AT3G50220" "AT3G50240"
## [799] "AT3G50685" "AT3G50790" "AT3G50820" "AT3G50840" "AT3G50890" "AT3G51080" "AT3G51150"
## [806] "AT3G51420" "AT3G51470" "AT3G51480" "AT3G51510" "AT3G51820" "AT3G51910" "AT3G52150"
## [813] "AT3G52370" "AT3G52670" "AT3G52720" "AT3G52940" "AT3G52960" "AT3G53130" "AT3G53140"
## [820] "AT3G53190" "AT3G53420" "AT3G53460" "AT3G53800" "AT3G53950" "AT3G54050" "AT3G54400"
## [827] "AT3G54600" "AT3G54690" "AT3G54830" "AT3G54910" "AT3G54920" "AT3G55330" "AT3G55630"
## [834] "AT3G55800" "AT3G56160" "AT3G56370" "AT3G56650" "AT3G56940" "AT3G57180" "AT3G57830"
## [841] "AT3G58120" "AT3G58620" "AT3G58820" "AT3G59250" "AT3G59400" "AT3G59780" "AT3G59890"
## [848] "AT3G60070" "AT3G60320" "AT3G60370" "AT3G60530" "AT3G60630" "AT3G60750" "AT3G61160"
## [855] "AT3G61470" "AT3G61490" "AT3G61750" "AT3G61820" "AT3G61870" "AT3G61950" "AT3G62020"
## [862] "AT3G62070" "AT3G62550" "AT3G62690" "AT3G62750" "AT3G62910" "AT3G63110" "AT3G63140"
## [869] "AT3G63160" "AT3G63170" "AT3G63410" "AT3G63510" "AT4G00165" "AT4G00370" "AT4G00400"
## [876] "AT4G00950" "AT4G01130" "AT4G01310" "AT4G01330" "AT4G01440" "AT4G01460" "AT4G01670"
## [883] "AT4G02290" "AT4G02330" "AT4G02630" "AT4G02770" "AT4G03010" "AT4G03060" "AT4G03140"
## [890] "AT4G03190" "AT4G03210" "AT4G03280" "AT4G04330" "AT4G04340" "AT4G04350" "AT4G04450"
## [897] "AT4G04810" "AT4G07400" "AT4G07960" "AT4G09010" "AT4G09160" "AT4G09420" "AT4G09640"
## [904] "AT4G09650" "AT4G10120" "AT4G10340" "AT4G10800" "AT4G11290" "AT4G11450" "AT4G12030"
## [911] "AT4G12310" "AT4G12320" "AT4G12390" "AT4G12420" "AT4G12480" "AT4G12730" "AT4G12800"
## [918] "AT4G12830" "AT4G12900" "AT4G12917" "AT4G12970" "AT4G12980" "AT4G13260" "AT4G13340"
## [925] "AT4G13560" "AT4G13990" "AT4G14480" "AT4G14713" "AT4G14740" "AT4G14750" "AT4G14940"
## [932] "AT4G15210" "AT4G15510" "AT4G15810" "AT4G15960" "AT4G16140" "AT4G16141" "AT4G16370"
## [939] "AT4G16980" "AT4G17180" "AT4G17340" "AT4G17460" "AT4G17560" "AT4G17600" "AT4G17810"
## [946] "AT4G18197" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19170" "AT4G19380" "AT4G19530"
## [953] "AT4G20130" "AT4G20140" "AT4G20360" "AT4G20430" "AT4G20820" "AT4G20840" "AT4G21280"
## [960] "AT4G21870" "AT4G22120" "AT4G22690" "AT4G22890" "AT4G23000" "AT4G23290" "AT4G23740"
## [967] "AT4G23820" "AT4G23940" "AT4G24250" "AT4G24570" "AT4G24660" "AT4G24780" "AT4G24790"
## [974] "AT4G24810" "AT4G24930" "AT4G24972" "AT4G25050" "AT4G25080" "AT4G25100" "AT4G25200"
## [981] "AT4G25490" "AT4G25780" "AT4G25910" "AT4G25960" "AT4G25990" "AT4G26370" "AT4G26520"
## [988] "AT4G26530" "AT4G26540" "AT4G26542" "AT4G27030" "AT4G27440" "AT4G27720" "AT4G27730"
## [995] "AT4G27970" "AT4G27980" "AT4G28050" "AT4G28080" "AT4G28162" "AT4G28180"
## [ reached getOption("max.print") -- omitted 391 entries ]
##
## $`M12-V12_up`
## [1] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" "AT1G02710" "AT1G03130" "AT1G03300"
## [8] "AT1G03457" "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04730" "AT1G04980" "AT1G05420"
## [15] "AT1G06160" "AT1G06760" "AT1G07300" "AT1G07880" "AT1G08300" "AT1G08380" "AT1G08560"
## [22] "AT1G08900" "AT1G09080" "AT1G09200" "AT1G09440" "AT1G09750" "AT1G10020" "AT1G10380"
## [29] "AT1G10657" "AT1G10910" "AT1G10930" "AT1G10990" "AT1G11000" "AT1G11350" "AT1G11380"
## [36] "AT1G12460" "AT1G12700" "AT1G12730" "AT1G12860" "AT1G13110" "AT1G13650" "AT1G13700"
## [43] "AT1G14070" "AT1G14180" "AT1G14185" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15125"
## [50] "AT1G15550" "AT1G15890" "AT1G15980" "AT1G15990" "AT1G16640" "AT1G17147" "AT1G17990"
## [57] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550"
## [64] "AT1G18620" "AT1G18650" "AT1G19340" "AT1G19610" "AT1G19620" "AT1G20640" "AT1G21050"
## [71] "AT1G21120" "AT1G21130" "AT1G21326" "AT1G21580" "AT1G21910" "AT1G21920" "AT1G22330"
## [78] "AT1G22370" "AT1G22590" "AT1G22740" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205"
## [85] "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23750" "AT1G25440" "AT1G26150" "AT1G26420"
## [92] "AT1G26800" "AT1G27020" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G28400"
## [99] "AT1G28660" "AT1G28670" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [106] "AT1G29510" "AT1G29600" "AT1G29660" "AT1G29715" "AT1G30520" "AT1G30840" "AT1G31173"
## [113] "AT1G31355" "AT1G31820" "AT1G31835" "AT1G31920" "AT1G31950" "AT1G32740" "AT1G33055"
## [120] "AT1G33240" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34315" "AT1G35140" "AT1G36940"
## [127] "AT1G44900" "AT1G47890" "AT1G48260" "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49200"
## [134] "AT1G49230" "AT1G50040" "AT1G50180" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [141] "AT1G51850" "AT1G51920" "AT1G51940" "AT1G52190" "AT1G52230" "AT1G52750" "AT1G52800"
## [148] "AT1G53070" "AT1G53230" "AT1G53233" "AT1G53410" "AT1G54730" "AT1G54740" "AT1G54820"
## [155] "AT1G55330" "AT1G55370" "AT1G56220" "AT1G56720" "AT1G57943" "AT1G58225" "AT1G60390"
## [162] "AT1G60830" "AT1G60860" "AT1G61190" "AT1G61240" "AT1G61300" "AT1G61500" "AT1G61795"
## [169] "AT1G62520" "AT1G62790" "AT1G62910" "AT1G63080" "AT1G63260" "AT1G63400" "AT1G63530"
## [176] "AT1G63570" "AT1G63880" "AT1G64320" "AT1G64625" "AT1G65295" "AT1G65500" "AT1G65845"
## [183] "AT1G66180" "AT1G66810" "AT1G66920" "AT1G66940" "AT1G67590" "AT1G68190" "AT1G68520"
## [190] "AT1G68585" "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69780" "AT1G70100"
## [197] "AT1G70940" "AT1G71030" "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72270" "AT1G72416"
## [204] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G73110" "AT1G73830" "AT1G73890"
## [211] "AT1G74670" "AT1G74930" "AT1G74940" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75250"
## [218] "AT1G75388" "AT1G75390" "AT1G75750" "AT1G76100" "AT1G76960" "AT1G77131" "AT1G77138"
## [225] "AT1G77210" "AT1G77510" "AT1G77640" "AT1G77990" "AT1G78000" "AT1G78265" "AT1G78270"
## [232] "AT1G78450" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G79110" "AT1G79760" "AT1G79960"
## [239] "AT1G80630" "AT2G01420" "AT2G01630" "AT2G01860" "AT2G02020" "AT2G02780" "AT2G02950"
## [246] "AT2G02980" "AT2G03310" "AT2G03750" "AT2G05160" "AT2G05632" "AT2G05790" "AT2G06850"
## [253] "AT2G07680" "AT2G07690" "AT2G13550" "AT2G14050" "AT2G14660" "AT2G14890" "AT2G15880"
## [260] "AT2G15890" "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17740" "AT2G17780" "AT2G17880"
## [267] "AT2G18300" "AT2G18560" "AT2G18890" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20170"
## [274] "AT2G20180" "AT2G20950" "AT2G22810" "AT2G22830" "AT2G22890" "AT2G23100" "AT2G23290"
## [281] "AT2G23600" "AT2G24170" "AT2G24280" "AT2G24350" "AT2G24610" "AT2G25200" "AT2G25470"
## [288] "AT2G25680" "AT2G25790" "AT2G25900" "AT2G26710" "AT2G26870" "AT2G28040" "AT2G28050"
## [295] "AT2G28120" "AT2G28460" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950" "AT2G29290"
## [302] "AT2G29320" "AT2G29410" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30930" "AT2G31150"
## [309] "AT2G31751" "AT2G32100" "AT2G33020" "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33480"
## [316] "AT2G33830" "AT2G34510" "AT2G34620" "AT2G35170" "AT2G35260" "AT2G35590" "AT2G36050"
## [323] "AT2G36200" "AT2G36400" "AT2G36970" "AT2G37450" "AT2G37950" "AT2G39180" "AT2G39430"
## [330] "AT2G39580" "AT2G39730" "AT2G40100" "AT2G40530" "AT2G40610" "AT2G40711" "AT2G40850"
## [337] "AT2G41250" "AT2G41550" "AT2G41820" "AT2G41940" "AT2G42040" "AT2G42170" "AT2G42300"
## [344] "AT2G42320" "AT2G42380" "AT2G42690" "AT2G42940" "AT2G42960" "AT2G43150" "AT2G43445"
## [351] "AT2G44370" "AT2G44380" "AT2G44630" "AT2G44740" "AT2G45180" "AT2G45830" "AT2G45850"
## [358] "AT2G47440" "AT2G47480" "AT2G47920" "AT2G47930" "AT3G01480" "AT3G01490" "AT3G02370"
## [365] "AT3G02640" "AT3G03820" "AT3G04160" "AT3G04300" "AT3G04720" "AT3G04960" "AT3G05320"
## [372] "AT3G05740" "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06740" "AT3G07010"
## [379] "AT3G07210" "AT3G07460" "AT3G07540" "AT3G08600" "AT3G08940" "AT3G08970" "AT3G09160"
## [386] "AT3G09730" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10120" "AT3G10520" "AT3G10525"
## [393] "AT3G11110" "AT3G12110" "AT3G12150" "AT3G12170" "AT3G12610" "AT3G12820" "AT3G13000"
## [400] "AT3G13062" "AT3G13437" "AT3G14210" "AT3G14240" "AT3G14740" "AT3G15356" "AT3G15400"
## [407] "AT3G15450" "AT3G15570" "AT3G16175" "AT3G16250" "AT3G16520" "AT3G16530" "AT3G17160"
## [414] "AT3G18035" "AT3G18050" "AT3G18080" "AT3G18730" "AT3G18773" "AT3G19380" "AT3G19680"
## [421] "AT3G19850" "AT3G20015" "AT3G20200" "AT3G20350" "AT3G20820" "AT3G21060" "AT3G21500"
## [428] "AT3G22060" "AT3G22150" "AT3G22460" "AT3G22968" "AT3G22970" "AT3G23440" "AT3G23550"
## [435] "AT3G23730" "AT3G23740" "AT3G23880" "AT3G24760" "AT3G25130" "AT3G25500" "AT3G25717"
## [442] "AT3G26200" "AT3G26320" "AT3G26445" "AT3G26490" "AT3G26510" "AT3G26740" "AT3G26890"
## [449] "AT3G26932" "AT3G27060" "AT3G27360" "AT3G28040" "AT3G28070" "AT3G28860" "AT3G29035"
## [456] "AT3G29670" "AT3G29680" "AT3G30720" "AT3G42670" "AT3G44260" "AT3G45230" "AT3G45290"
## [463] "AT3G45330" "AT3G45850" "AT3G45940" "AT3G45980" "AT3G46320" "AT3G46550" "AT3G46580"
## [470] "AT3G48200" "AT3G48490" "AT3G48600" "AT3G49650" "AT3G50120" "AT3G50240" "AT3G50840"
## [477] "AT3G51220" "AT3G51740" "AT3G51910" "AT3G52070" "AT3G52072" "AT3G52630" "AT3G52720"
## [484] "AT3G53800" "AT3G54910" "AT3G55090" "AT3G55580" "AT3G56000" "AT3G56160" "AT3G58120"
## [491] "AT3G58620" "AT3G59120" "AT3G59250" "AT3G59550" "AT3G59780" "AT3G60320" "AT3G61820"
## [498] "AT3G62150" "AT3G62500" "AT3G62550" "AT3G62690" "AT3G62750" "AT4G00020" "AT4G00950"
## [505] "AT4G01330" "AT4G01460" "AT4G02060" "AT4G02075" "AT4G02110" "AT4G02330" "AT4G02540"
## [512] "AT4G02630" "AT4G02900" "AT4G03115" "AT4G03140" "AT4G03190" "AT4G03210" "AT4G05130"
## [519] "AT4G07400" "AT4G09160" "AT4G09430" "AT4G09432" "AT4G10120" "AT4G10380" "AT4G10600"
## [526] "AT4G11500" "AT4G12390" "AT4G12420" "AT4G12450" "AT4G12480" "AT4G12900" "AT4G12917"
## [533] "AT4G12980" "AT4G13100" "AT4G13340" "AT4G13493" "AT4G13494" "AT4G13495" "AT4G13560"
## [540] "AT4G13810" "AT4G14560" "AT4G14620" "AT4G14622" "AT4G14713" "AT4G14750" "AT4G14940"
## [547] "AT4G15540" "AT4G15810" "AT4G15960" "AT4G16141" "AT4G16370" "AT4G16563" "AT4G16980"
## [554] "AT4G17180" "AT4G17460" "AT4G17810" "AT4G18195" "AT4G18197" "AT4G18205" "AT4G18380"
## [561] "AT4G18540" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19090" "AT4G19170" "AT4G19370"
## [568] "AT4G19420" "AT4G19530" "AT4G19870" "AT4G20000" "AT4G20140" "AT4G20260" "AT4G20362"
## [575] "AT4G20430" "AT4G21445" "AT4G21870" "AT4G22560" "AT4G22690" "AT4G22710" "AT4G23290"
## [582] "AT4G23310" "AT4G23400" "AT4G24190" "AT4G24275" "AT4G24570" "AT4G26760" "AT4G27300"
## [589] "AT4G27440" "AT4G27730" "AT4G28160" "AT4G28162" "AT4G28310" "AT4G28350" "AT4G29310"
## [596] "AT4G30110" "AT4G30410" "AT4G31060" "AT4G31890" "AT4G32280" "AT4G32450" "AT4G32980"
## [603] "AT4G33000" "AT4G33010" "AT4G33560" "AT4G34220" "AT4G34760" "AT4G34770" "AT4G34790"
## [610] "AT4G34970" "AT4G34980" "AT4G35770" "AT4G36220" "AT4G36410" "AT4G36540" "AT4G36690"
## [617] "AT4G37800" "AT4G37925" "AT4G38080" "AT4G38400" "AT4G38700" "AT4G38840" "AT4G38860"
## [624] "AT4G38950" "AT4G39320" "AT5G01560" "AT5G01740" "AT5G01930" "AT5G02400" "AT5G02440"
## [631] "AT5G02540" "AT5G02760" "AT5G02890" "AT5G03120" "AT5G03150" "AT5G03552" "AT5G03830"
## [638] "AT5G04230" "AT5G05890" "AT5G06690" "AT5G07150" "AT5G07152" "AT5G07570" "AT5G07580"
## [645] "AT5G07590" "AT5G09730" "AT5G10150" "AT5G10250" "AT5G10260" "AT5G10530" "AT5G10690"
## [652] "AT5G10770" "AT5G11070" "AT5G11610" "AT5G11670" "AT5G12900" "AT5G13060" "AT5G13730"
## [659] "AT5G13990" "AT5G14350" "AT5G14920" "AT5G15350" "AT5G15580" "AT5G15770" "AT5G16000"
## [666] "AT5G16030" "AT5G16530" "AT5G18030" "AT5G18080" "AT5G18290" "AT5G18660" "AT5G19160"
## [673] "AT5G19190" "AT5G19810" "AT5G20410" "AT5G20450" "AT5G20635" "AT5G21222" "AT5G21930"
## [680] "AT5G22110" "AT5G22880" "AT5G22920" "AT5G22930" "AT5G23170" "AT5G23210" "AT5G23240"
## [687] "AT5G23280" "AT5G23480" "AT5G24000" "AT5G24010" "AT5G24490" "AT5G25130" "AT5G25190"
## [694] "AT5G25210" "AT5G25240" "AT5G25620" "AT5G25630" "AT5G26010" "AT5G27950" "AT5G28020"
## [701] "AT5G33280" "AT5G35732" "AT5G35750" "AT5G35790" "AT5G38140" "AT5G38410" "AT5G38420"
## [708] "AT5G38430" "AT5G39530" "AT5G39865" "AT5G40150" "AT5G41050" "AT5G41140" "AT5G41761"
## [715] "AT5G43700" "AT5G44020" "AT5G44130" "AT5G44260" "AT5G44600" "AT5G44635" "AT5G44650"
## [722] "AT5G44680" "AT5G45520" "AT5G45650" "AT5G45790" "AT5G46110" "AT5G46270" "AT5G46280"
## [729] "AT5G46440" "AT5G46690" "AT5G47220" "AT5G47230" "AT5G48320" "AT5G48360" "AT5G48670"
## [736] "AT5G48910" "AT5G49215" "AT5G49390" "AT5G49730" "AT5G49740" "AT5G50450" "AT5G51550"
## [743] "AT5G51560" "AT5G51590" "AT5G51670" "AT5G51790" "AT5G51970" "AT5G52100" "AT5G52280"
## [750] "AT5G52900" "AT5G52910" "AT5G53110" "AT5G53170" "AT5G54190" "AT5G54630" "AT5G54670"
## [757] "AT5G56100" "AT5G56220" "AT5G56580" "AT5G56840" "AT5G56850" "AT5G56870" "AT5G57550"
## [764] "AT5G57560" "AT5G57780" "AT5G58150" "AT5G58390" "AT5G59540" "AT5G59750" "AT5G59900"
## [771] "AT5G59970" "AT5G60100" "AT5G60490" "AT5G61000" "AT5G61160" "AT5G61590" "AT5G61660"
## [778] "AT5G62170" "AT5G62280" "AT5G62730" "AT5G63410" "AT5G63480" "AT5G63800" "AT5G64040"
## [785] "AT5G64120" "AT5G64330" "AT5G64410" "AT5G64630" "AT5G65350" "AT5G65360" "AT5G65600"
## [792] "AT5G65730" "AT5G66005" "AT5G66490" "AT5G66520" "AT5G66770" "AT5G66880" "AT5G67100"
##
## $`A12-V12_up`
## [1] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02470" "AT1G02920" "AT1G02930"
## [8] "AT1G03210" "AT1G03850" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07370" "AT1G08450"
## [15] "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420" "AT1G09500" "AT1G10070" "AT1G12290"
## [22] "AT1G13420" "AT1G13520" "AT1G14880" "AT1G15125" "AT1G15310" "AT1G15380" "AT1G15890"
## [29] "AT1G17020" "AT1G17147" "AT1G17460" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G21120"
## [36] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G25275" "AT1G26290" "AT1G26380" "AT1G26420"
## [43] "AT1G26800" "AT1G27330" "AT1G27350" "AT1G30420" "AT1G30860" "AT1G32210" "AT1G33030"
## [50] "AT1G33055" "AT1G33950" "AT1G33960" "AT1G35670" "AT1G36622" "AT1G44900" "AT1G47890"
## [57] "AT1G48260" "AT1G50520" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52200" "AT1G53110"
## [64] "AT1G53620" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G58180" "AT1G58225" "AT1G58590"
## [71] "AT1G61160" "AT1G61810" "AT1G61820" "AT1G62790" "AT1G63460" "AT1G65470" "AT1G65486"
## [78] "AT1G65490" "AT1G65845" "AT1G66345" "AT1G66960" "AT1G67520" "AT1G67630" "AT1G67810"
## [85] "AT1G67980" "AT1G68585" "AT1G69490" "AT1G69543" "AT1G69720" "AT1G71970" "AT1G72060"
## [92] "AT1G72070" "AT1G74590" "AT1G75170" "AT1G75830" "AT1G76960" "AT1G77145" "AT1G77920"
## [99] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79450" "AT1G79960" "AT1G80460"
## [106] "AT2G01818" "AT2G02060" "AT2G02350" "AT2G02360" "AT2G02930" "AT2G04515" "AT2G07690"
## [113] "AT2G14560" "AT2G14610" "AT2G17040" "AT2G18660" "AT2G19190" "AT2G21185" "AT2G21187"
## [120] "AT2G23170" "AT2G23840" "AT2G24040" "AT2G24240" "AT2G24390" "AT2G25625" "AT2G26560"
## [127] "AT2G27389" "AT2G27390" "AT2G27660" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28940"
## [134] "AT2G29350" "AT2G29470" "AT2G29950" "AT2G30480" "AT2G31020" "AT2G31730" "AT2G31865"
## [141] "AT2G32160" "AT2G32460" "AT2G32680" "AT2G33480" "AT2G33520" "AT2G37750" "AT2G39320"
## [148] "AT2G40110" "AT2G40550" "AT2G40880" "AT2G41082" "AT2G41250" "AT2G41380" "AT2G41440"
## [155] "AT2G43000" "AT2G43150" "AT2G44370" "AT2G44380" "AT2G44980" "AT2G45510" "AT2G46380"
## [162] "AT3G02820" "AT3G03470" "AT3G03610" "AT3G03650" "AT3G04070" "AT3G04720" "AT3G05740"
## [169] "AT3G05870" "AT3G07580" "AT3G07600" "AT3G07800" "AT3G10320" "AT3G11000" "AT3G11090"
## [176] "AT3G12220" "AT3G12230" "AT3G13433" "AT3G13437" "AT3G13790" "AT3G14280" "AT3G14700"
## [183] "AT3G14740" "AT3G15518" "AT3G18250" "AT3G18730" "AT3G19390" "AT3G19615" "AT3G19660"
## [190] "AT3G20340" "AT3G21780" "AT3G22460" "AT3G23740" "AT3G26210" "AT3G26220" "AT3G26230"
## [197] "AT3G26440" "AT3G26470" "AT3G26500" "AT3G28540" "AT3G28570" "AT3G28850" "AT3G28950"
## [204] "AT3G29240" "AT3G44300" "AT3G44490" "AT3G45290" "AT3G45330" "AT3G45860" "AT3G45930"
## [211] "AT3G47830" "AT3G47836" "AT3G48490" "AT3G48630" "AT3G48640" "AT3G49110" "AT3G49130"
## [218] "AT3G49540" "AT3G50550" "AT3G51250" "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920"
## [225] "AT3G52630" "AT3G52748" "AT3G53150" "AT3G53235" "AT3G54150" "AT3G56500" "AT3G56870"
## [232] "AT3G56891" "AT3G57240" "AT3G57550" "AT3G59100" "AT3G60540" "AT3G61198" "AT3G61390"
## [239] "AT3G62590" "AT3G62600" "AT3G63030" "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060"
## [246] "AT4G02110" "AT4G02520" "AT4G04620" "AT4G04740" "AT4G08770" "AT4G09750" "AT4G10860"
## [253] "AT4G11070" "AT4G11300" "AT4G13900" "AT4G14020" "AT4G14800" "AT4G15530" "AT4G15610"
## [260] "AT4G17660" "AT4G18360" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21610"
## [267] "AT4G21730" "AT4G22520" "AT4G23260" "AT4G23271" "AT4G25000" "AT4G25070" "AT4G25900"
## [274] "AT4G27745" "AT4G28310" "AT4G28390" "AT4G28405" "AT4G30640" "AT4G32870" "AT4G33355"
## [281] "AT4G33925" "AT4G34060" "AT4G34135" "AT4G36710" "AT4G37310" "AT4G37390" "AT4G37520"
## [288] "AT4G38080" "AT4G39190" "AT4G39580" "AT5G01550" "AT5G01610" "AT5G02502" "AT5G02520"
## [295] "AT5G02690" "AT5G03285" "AT5G04180" "AT5G05270" "AT5G05300" "AT5G06310" "AT5G07650"
## [302] "AT5G07660" "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08760" "AT5G09290"
## [309] "AT5G10390" "AT5G10400" "AT5G10440" "AT5G11920" "AT5G11950" "AT5G14420" "AT5G15860"
## [316] "AT5G15870" "AT5G17330" "AT5G20400" "AT5G20960" "AT5G22880" "AT5G23420" "AT5G24205"
## [323] "AT5G24206" "AT5G24230" "AT5G24910" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26731"
## [330] "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38900" "AT5G39520" "AT5G39680" "AT5G39950"
## [337] "AT5G40010" "AT5G40240" "AT5G40690" "AT5G40720" "AT5G41160" "AT5G41880" "AT5G42530"
## [344] "AT5G42830" "AT5G43910" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G46230" "AT5G46500"
## [351] "AT5G47220" "AT5G48180" "AT5G48290" "AT5G49690" "AT5G50460" "AT5G52720" "AT5G52910"
## [358] "AT5G52990" "AT5G53820" "AT5G54490" "AT5G54500" "AT5G54840" "AT5G55460" "AT5G56050"
## [365] "AT5G56120" "AT5G56870" "AT5G57010" "AT5G57550" "AT5G58840" "AT5G59530" "AT5G59662"
## [372] "AT5G59890" "AT5G60530" "AT5G61000" "AT5G61070" "AT5G61160" "AT5G61460" "AT5G61490"
## [379] "AT5G63135" "AT5G63240" "AT5G63550" "AT5G64000" "AT5G64190" "AT5G65350" "AT5G65360"
## [386] "AT5G66170" "AT5G67100" "AT5G67600"
##
## $`M1-A1_down`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT4G12480" "AT4G18540" "AT4G23550" "AT4G33980"
## [17] "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100"
##
## $`M1-V1_down`
## [1] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" "AT1G04280" "AT1G04620" "AT1G04990"
## [8] "AT1G05020" "AT1G05300" "AT1G05710" "AT1G06460" "AT1G07040" "AT1G07050" "AT1G07160"
## [15] "AT1G07420" "AT1G08980" "AT1G10040" "AT1G10070" "AT1G10200" "AT1G10710" "AT1G10990"
## [22] "AT1G11200" "AT1G11362" "AT1G11925" "AT1G11950" "AT1G12710" "AT1G12730" "AT1G13110"
## [29] "AT1G13270" "AT1G14170" "AT1G14540" "AT1G14870" "AT1G15125" "AT1G15670" "AT1G15890"
## [36] "AT1G16090" "AT1G17665" "AT1G19130" "AT1G19370" "AT1G20010" "AT1G20620" "AT1G20630"
## [43] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G22180" "AT1G22370"
## [50] "AT1G22480" "AT1G22490" "AT1G22770" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26380"
## [57] "AT1G26410" "AT1G26420" "AT1G26665" "AT1G27020" "AT1G27630" "AT1G28050" "AT1G28330"
## [64] "AT1G29160" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700" "AT1G30755"
## [71] "AT1G31690" "AT1G33030" "AT1G34380" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48605"
## [78] "AT1G49230" "AT1G49720" "AT1G51610" "AT1G51620" "AT1G51850" "AT1G51890" "AT1G51920"
## [85] "AT1G51940" "AT1G52200" "AT1G53035" "AT1G53100" "AT1G53625" "AT1G55450" "AT1G56140"
## [92] "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G59950" "AT1G60730"
## [99] "AT1G61360" "AT1G61420" "AT1G61550" "AT1G61560" "AT1G63180" "AT1G64110" "AT1G64760"
## [106] "AT1G65820" "AT1G66700" "AT1G66780" "AT1G67370" "AT1G67970" "AT1G67980" "AT1G68050"
## [113] "AT1G69520" "AT1G70220" "AT1G70800" "AT1G71000" "AT1G71400" "AT1G71520" "AT1G72330"
## [120] "AT1G72416" "AT1G74010" "AT1G75830" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77810"
## [127] "AT1G79440" "AT1G79460" "AT1G79680" "AT2G01540" "AT2G02010" "AT2G02100" "AT2G02220"
## [134] "AT2G02410" "AT2G02930" "AT2G05630" "AT2G05753" "AT2G14170" "AT2G15890" "AT2G16365"
## [141] "AT2G17740" "AT2G19190" "AT2G19450" "AT2G21130" "AT2G21660" "AT2G22450" "AT2G22970"
## [148] "AT2G22980" "AT2G23030" "AT2G23110" "AT2G24570" "AT2G24645" "AT2G25730" "AT2G25930"
## [155] "AT2G26560" "AT2G26650" "AT2G27200" "AT2G28190" "AT2G28930" "AT2G29720" "AT2G29740"
## [162] "AT2G30395" "AT2G30424" "AT2G30750" "AT2G30770" "AT2G31010" "AT2G33830" "AT2G35980"
## [169] "AT2G36390" "AT2G36815" "AT2G37430" "AT2G37940" "AT2G38465" "AT2G38860" "AT2G39200"
## [176] "AT2G39380" "AT2G39400" "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39900"
## [183] "AT2G39920" "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G42360" "AT2G43590"
## [190] "AT2G43620" "AT2G43940" "AT2G44080" "AT2G46940" "AT2G47390" "AT3G02800" "AT3G04420"
## [197] "AT3G05390" "AT3G07640" "AT3G07650" "AT3G09390" "AT3G09405" "AT3G10410" "AT3G11020"
## [204] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G13450" "AT3G13700" "AT3G13710"
## [211] "AT3G14360" "AT3G15356" "AT3G15518" "AT3G15620" "AT3G16180" "AT3G16360" "AT3G16530"
## [218] "AT3G16565" "AT3G18080" "AT3G19210" "AT3G19260" "AT3G19615" "AT3G20410" "AT3G21240"
## [225] "AT3G21470" "AT3G22460" "AT3G23280" "AT3G26500" "AT3G26670" "AT3G26680" "AT3G26740"
## [232] "AT3G26830" "AT3G27210" "AT3G27300" "AT3G28370" "AT3G30720" "AT3G43670" "AT3G43790"
## [239] "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46440" "AT3G46640" "AT3G46690" "AT3G47360"
## [246] "AT3G47800" "AT3G47860" "AT3G48490" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G50120"
## [253] "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50810" "AT3G51330" "AT3G52450" "AT3G54150"
## [260] "AT3G55150" "AT3G55450" "AT3G56500" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G59330"
## [267] "AT3G59350" "AT3G59700" "AT3G59900" "AT3G61160" "AT3G62150" "AT3G63160" "AT3G63380"
## [274] "AT4G01130" "AT4G01250" "AT4G01750" "AT4G02380" "AT4G02520" "AT4G03460" "AT4G04330"
## [281] "AT4G09020" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12470" "AT4G12480" "AT4G14270"
## [288] "AT4G15233" "AT4G16146" "AT4G16820" "AT4G17140" "AT4G18430" "AT4G18540" "AT4G18800"
## [295] "AT4G19120" "AT4G19390" "AT4G19410" "AT4G19810" "AT4G19880" "AT4G20000" "AT4G22710"
## [302] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23810" "AT4G25810" "AT4G25900" "AT4G26270"
## [309] "AT4G26670" "AT4G27130" "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G29600"
## [316] "AT4G30690" "AT4G31050" "AT4G31550" "AT4G31620" "AT4G32340" "AT4G33160" "AT4G33980"
## [323] "AT4G33985" "AT4G34580" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990" "AT4G35180"
## [330] "AT4G35380" "AT4G36760" "AT4G36770" "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410"
## [337] "AT4G38000" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G39230" "AT4G39270" "AT4G40070"
## [344] "AT5G02160" "AT5G02260" "AT5G02780" "AT5G03460" "AT5G05190" "AT5G05410" "AT5G06690"
## [351] "AT5G08380" "AT5G08490" "AT5G09500" "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150"
## [358] "AT5G11210" "AT5G11670" "AT5G12880" "AT5G12930" "AT5G14560" "AT5G15030" "AT5G15640"
## [365] "AT5G15840" "AT5G16380" "AT5G18470" "AT5G18525" "AT5G18540" "AT5G20950" "AT5G23235"
## [372] "AT5G23240" "AT5G23575" "AT5G23660" "AT5G24030" "AT5G24110" "AT5G24240" "AT5G24470"
## [379] "AT5G25340" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G33290"
## [386] "AT5G34780" "AT5G37740" "AT5G38895" "AT5G39410" "AT5G39580" "AT5G40240" "AT5G40760"
## [393] "AT5G41260" "AT5G42900" "AT5G44010" "AT5G44380" "AT5G44480" "AT5G44910" "AT5G46050"
## [400] "AT5G46600" "AT5G46860" "AT5G46871" "AT5G48250" "AT5G48430" "AT5G49015" "AT5G49900"
## [407] "AT5G50200" "AT5G51570" "AT5G51790" "AT5G53110" "AT5G54190" "AT5G54930" "AT5G54960"
## [414] "AT5G55050" "AT5G55090" "AT5G55530" "AT5G56580" "AT5G56960" "AT5G57110" "AT5G57220"
## [421] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G59310" "AT5G59530" "AT5G59570"
## [428] "AT5G60100" "AT5G61160" "AT5G61380" "AT5G61520" "AT5G61560" "AT5G62200" "AT5G62720"
## [435] "AT5G62900" "AT5G63810" "AT5G64660" "AT5G64860" "AT5G64905" "AT5G65600" "AT5G65609"
## [442] "AT5G66052" "AT5G66053" "AT5G66790"
##
## $`A1-V1_down`
## [1] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" "AT2G25730" "AT2G40080" "AT3G07640" "AT3G07650"
## [9] "AT4G01130" "AT4G04330" "AT4G26670" "AT4G33980" "AT5G02150" "AT5G11150" "AT5G39410" "AT5G42900"
## [17] "AT5G48250" "AT5G57110" "AT5G59570" "AT5G60100" "AT5G61380"
##
## $`M6-A6_down`
## [1] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01560" "AT1G01660" "AT1G01680"
## [8] "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450"
## [15] "AT1G02470" "AT1G02500" "AT1G02520" "AT1G02740" "AT1G02850" "AT1G02920" "AT1G02930"
## [22] "AT1G03050" "AT1G03495" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600"
## [29] "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05880"
## [36] "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06620" "AT1G07000" "AT1G07430" "AT1G07500"
## [43] "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08450" "AT1G08860" "AT1G09930" "AT1G09932"
## [50] "AT1G10040" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10990" "AT1G11330" "AT1G11905"
## [57] "AT1G12160" "AT1G12200" "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12940" "AT1G13310"
## [64] "AT1G13330" "AT1G13340" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550"
## [71] "AT1G13830" "AT1G14480" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15415" "AT1G15520"
## [78] "AT1G15790" "AT1G16090" "AT1G16150" "AT1G16300" "AT1G16420" "AT1G16670" "AT1G17170"
## [85] "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17744"
## [92] "AT1G17745" "AT1G17750" "AT1G17830" "AT1G18570" "AT1G18890" "AT1G18910" "AT1G19020"
## [99] "AT1G19250" "AT1G19540" "AT1G20310" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310"
## [106] "AT1G21370" "AT1G21390" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22180" "AT1G22220"
## [113] "AT1G22400" "AT1G22403" "AT1G23200" "AT1G23710" "AT1G23840" "AT1G23850" "AT1G24095"
## [120] "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G26130" "AT1G26380"
## [127] "AT1G26390" "AT1G26410" "AT1G26420" "AT1G27110" "AT1G27770" "AT1G28370" "AT1G28480"
## [134] "AT1G29195" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30190" "AT1G30270"
## [141] "AT1G30420" "AT1G30620" "AT1G30814" "AT1G30850" "AT1G30900" "AT1G31010" "AT1G31290"
## [148] "AT1G31880" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950" "AT1G32960"
## [155] "AT1G33030" "AT1G33110" "AT1G33420" "AT1G33430" "AT1G33560" "AT1G33720" "AT1G33730"
## [162] "AT1G33800" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35210"
## [169] "AT1G35230" "AT1G35710" "AT1G35910" "AT1G36622" "AT1G37130" "AT1G42980" "AT1G43910"
## [176] "AT1G44130" "AT1G45145" "AT1G47210" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320"
## [183] "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49050" "AT1G50400" "AT1G51640" "AT1G51645"
## [190] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51850" "AT1G51860" "AT1G51890" "AT1G51920"
## [197] "AT1G52315" "AT1G52540" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53620"
## [204] "AT1G53625" "AT1G54000" "AT1G54960" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [211] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G57560"
## [218] "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590" "AT1G59865" "AT1G60730" "AT1G61140"
## [225] "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61340" "AT1G61370" "AT1G61415"
## [232] "AT1G61420" "AT1G61550" "AT1G61640" "AT1G61800" "AT1G61810" "AT1G62320" "AT1G62422"
## [239] "AT1G62580" "AT1G63245" "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G64065"
## [246] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65690"
## [253] "AT1G65870" "AT1G66090" "AT1G66250" "AT1G66390" "AT1G66460" "AT1G66550" "AT1G66590"
## [260] "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67060"
## [267] "AT1G67070" "AT1G67360" "AT1G67520" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67800"
## [274] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67920" "AT1G67980" "AT1G68110" "AT1G68200"
## [281] "AT1G68250" "AT1G68390" "AT1G68620" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G69260"
## [288] "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69930" "AT1G70140"
## [295] "AT1G70170" "AT1G70690" "AT1G70990" "AT1G71390" "AT1G71690" "AT1G72000" "AT1G72220"
## [302] "AT1G72240" "AT1G72540" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72870"
## [309] "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010" "AT1G73130"
## [316] "AT1G73330" "AT1G73805" "AT1G73810" "AT1G73965" "AT1G74080" "AT1G74100" "AT1G74200"
## [323] "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750" "AT1G75040" "AT1G75060"
## [330] "AT1G75170" "AT1G75830" "AT1G76040" "AT1G76620" "AT1G76760" "AT1G76970" "AT1G76980"
## [337] "AT1G77500" "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78190" "AT1G78380"
## [344] "AT1G78410" "AT1G78780" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G80110" "AT1G80280"
## [351] "AT1G80300" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80830" "AT1G80840" "AT2G01180"
## [358] "AT2G01300" "AT2G01818" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02930" "AT2G03090"
## [365] "AT2G03505" "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450"
## [372] "AT2G04495" "AT2G04515" "AT2G05940" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13790"
## [379] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G16060" "AT2G16720"
## [386] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17440" "AT2G17500"
## [393] "AT2G17720" "AT2G18000" "AT2G18193" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G19190"
## [400] "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20562" "AT2G21188" "AT2G21350" "AT2G21470"
## [407] "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790" "AT2G22200" "AT2G22470" "AT2G23680"
## [414] "AT2G23810" "AT2G24285" "AT2G24490" "AT2G24850" "AT2G25190" "AT2G25240" "AT2G25260"
## [421] "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G26170" "AT2G26300" "AT2G26390"
## [428] "AT2G26400" "AT2G26480" "AT2G28160" "AT2G28210" "AT2G28400" "AT2G28570" "AT2G29100"
## [435] "AT2G29400" "AT2G29460" "AT2G29720" "AT2G29750" "AT2G29990" "AT2G30070" "AT2G30080"
## [442] "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018" "AT2G31020"
## [449] "AT2G31270" "AT2G31585" "AT2G31865" "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32130"
## [456] "AT2G32140" "AT2G32150" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32430" "AT2G32460"
## [463] "AT2G32590" "AT2G32960" "AT2G33110" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580"
## [470] "AT2G34610" "AT2G34650" "AT2G34940" "AT2G35710" "AT2G35980" "AT2G36026" "AT2G36270"
## [477] "AT2G36580" "AT2G36670" "AT2G36690" "AT2G37070" "AT2G37100" "AT2G37260" "AT2G37440"
## [484] "AT2G37560" "AT2G37710" "AT2G37750" "AT2G37890" "AT2G37980" "AT2G38290" "AT2G38340"
## [491] "AT2G38490" "AT2G38500" "AT2G38690" "AT2G38790" "AT2G38860" "AT2G39110" "AT2G39220"
## [498] "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650"
## [505] "AT2G40095" "AT2G40140" "AT2G40670" "AT2G40740" "AT2G41010" "AT2G41100" "AT2G41342"
## [512] "AT2G41380" "AT2G41410" "AT2G41660" "AT2G41835" "AT2G41880" "AT2G42060" "AT2G42350"
## [519] "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43050" "AT2G43140" "AT2G43290"
## [526] "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290"
## [533] "AT2G44578" "AT2G44600" "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45220" "AT2G45400"
## [540] "AT2G45760" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430" "AT2G46450"
## [547] "AT2G46620" "AT2G46680" "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47200" "AT2G47490"
## [554] "AT2G47670" "AT2G47720" "AT2G47730" "AT2G47800" "AT2G47820" "AT2G47950" "AT3G01290"
## [561] "AT3G01820" "AT3G01830" "AT3G01840" "AT3G02190" "AT3G02520" "AT3G02610" "AT3G02770"
## [568] "AT3G02800" "AT3G02820" "AT3G03310" "AT3G03440" "AT3G03450" "AT3G03610" "AT3G03700"
## [575] "AT3G03702" "AT3G03855" "AT3G04060" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04670"
## [582] "AT3G05330" "AT3G05360" "AT3G05500" "AT3G05650" "AT3G05830" "AT3G06490" "AT3G06890"
## [589] "AT3G07370" "AT3G07390" "AT3G07700" "AT3G07720" "AT3G08720" "AT3G08990" "AT3G09010"
## [596] "AT3G09032" "AT3G09280" "AT3G09405" "AT3G09450" "AT3G09480" "AT3G09520" "AT3G09790"
## [603] "AT3G09910" "AT3G09960" "AT3G10500" "AT3G10540" "AT3G10660" "AT3G10815" "AT3G10820"
## [610] "AT3G11000" "AT3G11010" "AT3G11080" "AT3G11220" "AT3G11340" "AT3G11420" "AT3G11600"
## [617] "AT3G11820" "AT3G11840" "AT3G12220" "AT3G12230" "AT3G12830" "AT3G12910" "AT3G13080"
## [624] "AT3G13090" "AT3G13100" "AT3G13380" "AT3G13433" "AT3G13610" "AT3G13782" "AT3G13900"
## [631] "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14460" "AT3G14470"
## [638] "AT3G14475" "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14710" "AT3G14840"
## [645] "AT3G14990" "AT3G15300" "AT3G15518" "AT3G15990" "AT3G16030" "AT3G16510" "AT3G16620"
## [652] "AT3G16800" "AT3G16980" "AT3G17240" "AT3G17280" "AT3G17420" "AT3G17520" "AT3G17609"
## [659] "AT3G17690" "AT3G17800" "AT3G18250" "AT3G19580" "AT3G19910" "AT3G19970" "AT3G20250"
## [666] "AT3G21080" "AT3G21140" "AT3G21150" "AT3G21220" "AT3G21240" "AT3G21320" "AT3G21520"
## [673] "AT3G21530" "AT3G21560" "AT3G21700" "AT3G22160" "AT3G22400" "AT3G22560" "AT3G22600"
## [680] "AT3G22910" "AT3G22930" "AT3G23110" "AT3G23120" "AT3G23240" "AT3G24900" "AT3G24927"
## [687] "AT3G25010" "AT3G25070" "AT3G25250" "AT3G25290" "AT3G25510" "AT3G25610" "AT3G25870"
## [694] "AT3G25882" "AT3G25890" "AT3G26210" "AT3G26440" "AT3G26470" "AT3G26680" "AT3G26690"
## [701] "AT3G26830" "AT3G26840" "AT3G27290" "AT3G27330" "AT3G27415" "AT3G27416" "AT3G27560"
## [708] "AT3G28007" "AT3G28340" "AT3G28510" "AT3G28540" "AT3G28570" "AT3G28580" "AT3G28840"
## [715] "AT3G28930" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G29590" "AT3G41979" "AT3G44300"
## [722] "AT3G44350" "AT3G44400" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G45040" "AT3G45330"
## [729] "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46510" "AT3G46520"
## [736] "AT3G46620" "AT3G47050" "AT3G47090" "AT3G47480" "AT3G47530" "AT3G47540" "AT3G47730"
## [743] "AT3G47780" "AT3G48020" "AT3G48080" "AT3G48090" "AT3G48100" "AT3G48240" "AT3G48490"
## [750] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48780" "AT3G48850" "AT3G49110" "AT3G49530"
## [757] "AT3G49540" "AT3G50280" "AT3G50470" "AT3G50480" "AT3G50760" "AT3G50770" "AT3G50800"
## [764] "AT3G50930" "AT3G51330" "AT3G51350" "AT3G51860" "AT3G52310" "AT3G52400" "AT3G52430"
## [771] "AT3G52460" "AT3G52470" "AT3G52540" "AT3G52630" "AT3G52870" "AT3G53120" "AT3G53150"
## [778] "AT3G53232" "AT3G53235" "AT3G53980" "AT3G54150" "AT3G54270" "AT3G54640" "AT3G55470"
## [785] "AT3G55500" "AT3G55730" "AT3G55880" "AT3G55950" "AT3G56170" "AT3G56275" "AT3G56400"
## [792] "AT3G56500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57100" "AT3G57260" "AT3G57330"
## [799] "AT3G57380" "AT3G57460" "AT3G57630" "AT3G57880" "AT3G57950" "AT3G59010" "AT3G59150"
## [806] "AT3G59700" "AT3G59750" "AT3G60110" "AT3G60164" "AT3G60190" "AT3G60420" "AT3G60450"
## [813] "AT3G60470" "AT3G60520" "AT3G60800" "AT3G60966" "AT3G60970" "AT3G61190" "AT3G61198"
## [820] "AT3G61390" "AT3G61450" "AT3G61960" "AT3G62260" "AT3G62760" "AT3G63010" "AT3G63060"
## [827] "AT3G63380" "AT4G00700" "AT4G00820" "AT4G00850" "AT4G01010" "AT4G01200" "AT4G01360"
## [834] "AT4G01430" "AT4G01535" "AT4G01540" "AT4G01870" "AT4G01895" "AT4G01920" "AT4G01950"
## [841] "AT4G02220" "AT4G02280" "AT4G02360" "AT4G02380" "AT4G02420" "AT4G02520" "AT4G02550"
## [848] "AT4G02660" "AT4G02760" "AT4G03450" "AT4G03460" "AT4G04220" "AT4G04221" "AT4G04223"
## [855] "AT4G04490" "AT4G04500" "AT4G04510" "AT4G04540" "AT4G04620" "AT4G04920" "AT4G05020"
## [862] "AT4G05030" "AT4G05390" "AT4G08300" "AT4G08555" "AT4G08770" "AT4G09300" "AT4G09570"
## [869] "AT4G09770" "AT4G09820" "AT4G10380" "AT4G10390" "AT4G10500" "AT4G10860" "AT4G10955"
## [876] "AT4G10960" "AT4G11170" "AT4G11240" "AT4G11340" "AT4G11350" "AT4G11655" "AT4G11840"
## [883] "AT4G11850" "AT4G11890" "AT4G12120" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [890] "AT4G13000" "AT4G13180" "AT4G13320" "AT4G13820" "AT4G13900" "AT4G13918" "AT4G13920"
## [897] "AT4G14090" "AT4G14220" "AT4G14365" "AT4G14368" "AT4G14370" "AT4G14630" "AT4G14690"
## [904] "AT4G15070" "AT4G15200" "AT4G15270" "AT4G15280" "AT4G15417" "AT4G15910" "AT4G16260"
## [911] "AT4G16350" "AT4G16600" "AT4G16820" "AT4G16960" "AT4G17250" "AT4G17660" "AT4G17670"
## [918] "AT4G17695" "AT4G18250" "AT4G18360" "AT4G18430" "AT4G18630" "AT4G19370" "AT4G19925"
## [925] "AT4G19970" "AT4G20000" "AT4G20110" "AT4G20460" "AT4G21400" "AT4G21500" "AT4G21610"
## [932] "AT4G21840" "AT4G21850" "AT4G21865" "AT4G21903" "AT4G21926" "AT4G21930" "AT4G22070"
## [939] "AT4G22520" "AT4G22530" "AT4G22590" "AT4G22592" "AT4G22880" "AT4G22980" "AT4G23030"
## [946] "AT4G23140" "AT4G23150" "AT4G23160" "AT4G23200" "AT4G23210" "AT4G23215" "AT4G23220"
## [953] "AT4G23250" "AT4G23280" "AT4G23300" "AT4G23310" "AT4G23320" "AT4G23450" "AT4G23470"
## [960] "AT4G23610" "AT4G23700" "AT4G24000" "AT4G24026" "AT4G24030" "AT4G24160" "AT4G25070"
## [967] "AT4G25390" "AT4G25880" "AT4G25900" "AT4G26060" "AT4G26120" "AT4G26270" "AT4G26400"
## [974] "AT4G26470" "AT4G26910" "AT4G26970" "AT4G26990" "AT4G27220" "AT4G27280" "AT4G27290"
## [981] "AT4G27480" "AT4G27745" "AT4G27830" "AT4G28390" "AT4G28490" "AT4G29440" "AT4G29740"
## [988] "AT4G29810" "AT4G29850" "AT4G30230" "AT4G30280" "AT4G30430" "AT4G30860" "AT4G31230"
## [995] "AT4G31500" "AT4G31860" "AT4G32870" "AT4G33040" "AT4G33050" "AT4G33300"
## [ reached getOption("max.print") -- omitted 343 entries ]
##
## $`M6-V6_down`
## [1] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520" "AT1G03010" "AT1G03200"
## [8] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G05100" "AT1G05840" "AT1G06620"
## [15] "AT1G07500" "AT1G07570" "AT1G08050" "AT1G09930" "AT1G09932" "AT1G10586" "AT1G11400"
## [22] "AT1G12160" "AT1G12380" "AT1G12540" "AT1G13150" "AT1G13310" "AT1G13330" "AT1G13340"
## [29] "AT1G13830" "AT1G14740" "AT1G15350" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G18200"
## [36] "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680" "AT1G20310"
## [43] "AT1G20460" "AT1G21240" "AT1G21740" "AT1G22180" "AT1G22220" "AT1G23060" "AT1G23850"
## [50] "AT1G26730" "AT1G26770" "AT1G26930" "AT1G28130" "AT1G28370" "AT1G29640" "AT1G30100"
## [57] "AT1G30160" "AT1G30850" "AT1G31120" "AT1G31770" "AT1G31900" "AT1G32870" "AT1G33110"
## [64] "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G37130" "AT1G43160" "AT1G43245"
## [71] "AT1G43910" "AT1G44130" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605"
## [78] "AT1G49520" "AT1G49530" "AT1G51760" "AT1G51780" "AT1G51860" "AT1G52030" "AT1G52565"
## [85] "AT1G52855" "AT1G52890" "AT1G53830" "AT1G54010" "AT1G54030" "AT1G54095" "AT1G55610"
## [92] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G58030" "AT1G59640" "AT1G60190" "AT1G60730"
## [99] "AT1G61110" "AT1G61120" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61550" "AT1G63840"
## [106] "AT1G65481" "AT1G65690" "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66280" "AT1G66350"
## [113] "AT1G66960" "AT1G67420" "AT1G67635" "AT1G67820" "AT1G68110" "AT1G69260" "AT1G69360"
## [120] "AT1G69480" "AT1G69530" "AT1G70690" "AT1G70790" "AT1G71110" "AT1G71390" "AT1G72210"
## [127] "AT1G72410" "AT1G72540" "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G74100"
## [134] "AT1G74430" "AT1G74710" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G76620" "AT1G76640"
## [141] "AT1G76980" "AT1G77280" "AT1G77760" "AT1G78290" "AT1G78780" "AT1G79270" "AT1G79310"
## [148] "AT1G80110" "AT1G80280" "AT1G80590" "AT1G80840" "AT2G01830" "AT2G02340" "AT2G04070"
## [155] "AT2G04430" "AT2G04450" "AT2G05940" "AT2G06255" "AT2G14610" "AT2G14620" "AT2G15760"
## [162] "AT2G16650" "AT2G16720" "AT2G17500" "AT2G18660" "AT2G20110" "AT2G20142" "AT2G21188"
## [169] "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G25690" "AT2G26300" "AT2G26390"
## [176] "AT2G26400" "AT2G26480" "AT2G27228" "AT2G27230" "AT2G27300" "AT2G28110" "AT2G28450"
## [183] "AT2G28570" "AT2G29100" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30540" "AT2G30770"
## [190] "AT2G30820" "AT2G30830" "AT2G31180" "AT2G32130" "AT2G32140" "AT2G32460" "AT2G32930"
## [197] "AT2G34010" "AT2G34070" "AT2G34080" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36640"
## [204] "AT2G37070" "AT2G37440" "AT2G37750" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490"
## [211] "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300" "AT2G39435" "AT2G39800" "AT2G40200"
## [218] "AT2G40460" "AT2G40670" "AT2G41070" "AT2G42060" "AT2G42760" "AT2G42890" "AT2G43000"
## [225] "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680" "AT2G44578" "AT2G44600"
## [232] "AT2G44840" "AT2G44940" "AT2G45245" "AT2G45760" "AT2G45920" "AT2G46040" "AT2G46400"
## [239] "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46900" "AT2G46970" "AT2G47000"
## [246] "AT2G47420" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01770" "AT3G02210" "AT3G02885"
## [253] "AT3G02990" "AT3G03310" "AT3G03440" "AT3G04000" "AT3G04420" "AT3G05500" "AT3G06020"
## [260] "AT3G06490" "AT3G06890" "AT3G09600" "AT3G09960" "AT3G10815" "AT3G11210" "AT3G11450"
## [267] "AT3G11480" "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13610"
## [274] "AT3G13730" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870" "AT3G15536" "AT3G15950"
## [281] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17420" "AT3G17510"
## [288] "AT3G17690" "AT3G17860" "AT3G19100" "AT3G19970" "AT3G20250" "AT3G21080" "AT3G21320"
## [295] "AT3G21500" "AT3G21670" "AT3G21700" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G24518"
## [302] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25890" "AT3G26440" "AT3G26470"
## [309] "AT3G27170" "AT3G27415" "AT3G27416" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510"
## [316] "AT3G28580" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G46658" "AT3G46660" "AT3G47420"
## [323] "AT3G47480" "AT3G47730" "AT3G48090" "AT3G48100" "AT3G48115" "AT3G48520" "AT3G48580"
## [330] "AT3G48630" "AT3G48700" "AT3G48780" "AT3G50770" "AT3G50930" "AT3G51090" "AT3G51670"
## [337] "AT3G51860" "AT3G52430" "AT3G53210" "AT3G54320" "AT3G54366" "AT3G55060" "AT3G55500"
## [344] "AT3G55970" "AT3G56170" "AT3G56260" "AT3G57260" "AT3G57380" "AT3G57460" "AT3G57950"
## [351] "AT3G59750" "AT3G59930" "AT3G60420" "AT3G60470" "AT3G60490" "AT3G60961" "AT3G60966"
## [358] "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61890" "AT3G61930"
## [365] "AT3G63010" "AT3G63380" "AT4G00700" "AT4G01430" "AT4G01535" "AT4G01540" "AT4G02360"
## [372] "AT4G02380" "AT4G02760" "AT4G03460" "AT4G04223" "AT4G04490" "AT4G04500" "AT4G04510"
## [379] "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06744" "AT4G09770" "AT4G10390" "AT4G10500"
## [386] "AT4G11240" "AT4G11350" "AT4G11990" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720"
## [393] "AT4G12735" "AT4G14630" "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G16260"
## [400] "AT4G16350" "AT4G17660" "AT4G17670" "AT4G17730" "AT4G20320" "AT4G21680" "AT4G21790"
## [407] "AT4G22070" "AT4G23150" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G25390" "AT4G25433"
## [414] "AT4G26080" "AT4G26120" "AT4G26470" "AT4G27590" "AT4G27860" "AT4G27870" "AT4G29380"
## [421] "AT4G29740" "AT4G29930" "AT4G30180" "AT4G32920" "AT4G33150" "AT4G34200" "AT4G34650"
## [428] "AT4G35600" "AT4G35720" "AT4G36010" "AT4G36430" "AT4G36640" "AT4G36780" "AT4G36950"
## [435] "AT4G37850" "AT4G37900" "AT4G38560" "AT4G39030" "AT4G39190" "AT4G39950" "AT5G01840"
## [442] "AT5G01850" "AT5G02100" "AT5G02170" "AT5G03210" "AT5G03435" "AT5G03668" "AT5G03670"
## [449] "AT5G03680" "AT5G04860" "AT5G04950" "AT5G05680" "AT5G06110" "AT5G06610" "AT5G07650"
## [456] "AT5G08620" "AT5G10380" "AT5G11210" "AT5G11390" "AT5G11870" "AT5G13210" "AT5G13220"
## [463] "AT5G13320" "AT5G13820" "AT5G14090" "AT5G14390" "AT5G14700" "AT5G14760" "AT5G15190"
## [470] "AT5G16170" "AT5G16360" "AT5G17330" "AT5G17490" "AT5G17760" "AT5G19110" "AT5G20700"
## [477] "AT5G20960" "AT5G21280" "AT5G21950" "AT5G22540" "AT5G22545" "AT5G22630" "AT5G23160"
## [484] "AT5G23380" "AT5G23590" "AT5G24090" "AT5G24200" "AT5G24240" "AT5G24280" "AT5G24290"
## [491] "AT5G24910" "AT5G26170" "AT5G26270" "AT5G26920" "AT5G28919" "AT5G28920" "AT5G33355"
## [498] "AT5G38130" "AT5G38250" "AT5G38350" "AT5G39610" "AT5G39670" "AT5G40210" "AT5G41180"
## [505] "AT5G41315" "AT5G41610" "AT5G41612" "AT5G41730" "AT5G42050" "AT5G43170" "AT5G44350"
## [512] "AT5G44380" "AT5G44390" "AT5G44460" "AT5G44990" "AT5G45070" "AT5G45080" "AT5G45090"
## [519] "AT5G45110" "AT5G45630" "AT5G46410" "AT5G46840" "AT5G47960" "AT5G48400" "AT5G48410"
## [526] "AT5G49100" "AT5G49280" "AT5G49560" "AT5G51380" "AT5G52720" "AT5G52730" "AT5G52882"
## [533] "AT5G53290" "AT5G53360" "AT5G54240" "AT5G54700" "AT5G56050" "AT5G56880" "AT5G57320"
## [540] "AT5G58570" "AT5G58620" "AT5G59220" "AT5G59480" "AT5G59580" "AT5G59590" "AT5G59780"
## [547] "AT5G60310" "AT5G60800" "AT5G60890" "AT5G61900" "AT5G61960" "AT5G62150" "AT5G62190"
## [554] "AT5G62480" "AT5G62920" "AT5G63225" "AT5G63450" "AT5G64530" "AT5G64570" "AT5G64572"
## [561] "AT5G64700" "AT5G64810" "AT5G65280" "AT5G65380" "AT5G66052" "AT5G66053" "AT5G66170"
## [568] "AT5G66630" "AT5G66650" "AT5G67080" "AT5G67160" "AT5G67200"
##
## $`A6-V6_down`
## [1] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" "AT1G12540" "AT1G16370" "AT1G16400"
## [8] "AT1G16410" "AT1G19650" "AT1G19670" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [15] "AT1G28010" "AT1G29280" "AT1G31770" "AT1G34210" "AT1G49520" "AT1G49530" "AT1G51780"
## [22] "AT1G54095" "AT1G63040" "AT1G63570" "AT1G65590" "AT1G66280" "AT1G69370" "AT1G69480"
## [29] "AT1G72140" "AT1G72180" "AT1G72450" "AT1G73210" "AT1G74430" "AT1G74950" "AT1G75540"
## [36] "AT2G01830" "AT2G02990" "AT2G03980" "AT2G06255" "AT2G22200" "AT2G22770" "AT2G22930"
## [43] "AT2G23760" "AT2G25130" "AT2G27228" "AT2G27230" "AT2G30540" "AT2G30820" "AT2G30830"
## [50] "AT2G34010" "AT2G34070" "AT2G35950" "AT2G36350" "AT2G36380" "AT2G36815" "AT2G36830"
## [57] "AT2G37180" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G39250" "AT2G39800" "AT2G40460"
## [64] "AT2G42760" "AT2G47600" "AT2G47950" "AT3G01180" "AT3G02990" "AT3G06020" "AT3G11470"
## [71] "AT3G11480" "AT3G14870" "AT3G15720" "AT3G16460" "AT3G17510" "AT3G17860" "AT3G19100"
## [78] "AT3G21670" "AT3G23910" "AT3G27170" "AT3G27960" "AT3G43270" "AT3G47750" "AT3G48350"
## [85] "AT3G48520" "AT3G54820" "AT3G55290" "AT3G55970" "AT3G56260" "AT3G57780" "AT3G59710"
## [92] "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61890" "AT3G62700" "AT4G03060" "AT4G03400"
## [99] "AT4G10060" "AT4G10390" "AT4G12030" "AT4G15430" "AT4G16740" "AT4G22200" "AT4G23420"
## [106] "AT4G25433" "AT4G25780" "AT4G27870" "AT4G32780" "AT4G36010" "AT4G37850" "AT5G01840"
## [113] "AT5G02260" "AT5G07690" "AT5G11160" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G15190"
## [120] "AT5G17490" "AT5G19110" "AT5G21280" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G26260"
## [127] "AT5G26270" "AT5G27350" "AT5G41120" "AT5G42650" "AT5G44350" "AT5G52120" "AT5G52882"
## [134] "AT5G53290" "AT5G54300" "AT5G57340" "AT5G57800" "AT5G60890" "AT5G61890" "AT5G62470"
## [141] "AT5G62920" "AT5G63450" "AT5G64750" "AT5G65280" "AT5G66052" "AT5G67150" "AT5G67160"
##
## $`M12-A12_down`
## [1] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390" "AT1G02405"
## [15] "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02660" "AT1G02750" "AT1G03050" "AT1G03180"
## [22] "AT1G03210" "AT1G03290" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03660" "AT1G03850"
## [29] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [36] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05680" "AT1G05835"
## [43] "AT1G05880" "AT1G06180" "AT1G06620" "AT1G06660" "AT1G07000" "AT1G07020" "AT1G07430"
## [50] "AT1G07476" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620" "AT1G07630"
## [57] "AT1G08050" "AT1G08630" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240"
## [64] "AT1G09350" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09794" "AT1G09930" "AT1G09932"
## [71] "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10410" "AT1G10417" "AT1G10520" "AT1G10585"
## [78] "AT1G10690" "AT1G10710" "AT1G11100" "AT1G11330" "AT1G11362" "AT1G11400" "AT1G11480"
## [85] "AT1G11785" "AT1G11905" "AT1G12320" "AT1G12540" "AT1G13310" "AT1G13330" "AT1G13340"
## [92] "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550" "AT1G13990" "AT1G14260"
## [99] "AT1G14330" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15010" "AT1G15040" "AT1G15380"
## [106] "AT1G15405" "AT1G15415" "AT1G15520" "AT1G15670" "AT1G15790" "AT1G15800" "AT1G16150"
## [113] "AT1G16300" "AT1G16420" "AT1G16500" "AT1G16670" "AT1G17020" "AT1G17380" "AT1G17490"
## [120] "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17745" "AT1G17750" "AT1G18570" "AT1G18890"
## [127] "AT1G19020" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19250" "AT1G19270"
## [134] "AT1G19490" "AT1G19640" "AT1G20310" "AT1G20740" "AT1G20780" "AT1G21000" "AT1G21200"
## [141] "AT1G21210" "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21520"
## [148] "AT1G21525" "AT1G21740" "AT1G21930" "AT1G22180" "AT1G22220" "AT1G22280" "AT1G22400"
## [155] "AT1G22403" "AT1G22410" "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22840" "AT1G22985"
## [162] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23560" "AT1G23840" "AT1G23850"
## [169] "AT1G24140" "AT1G24145" "AT1G24147" "AT1G24150" "AT1G25400" "AT1G26130" "AT1G26200"
## [176] "AT1G26290" "AT1G26330" "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26762"
## [183] "AT1G26930" "AT1G27110" "AT1G27300" "AT1G27980" "AT1G28190" "AT1G28360" "AT1G28370"
## [190] "AT1G28480" "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30135"
## [197] "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30473" "AT1G30620" "AT1G30700" "AT1G30755"
## [204] "AT1G30814" "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31290" "AT1G31540"
## [211] "AT1G31550" "AT1G31900" "AT1G32210" "AT1G32350" "AT1G32560" "AT1G32870" "AT1G32910"
## [218] "AT1G32920" "AT1G32940" "AT1G32950" "AT1G32960" "AT1G33030" "AT1G33420" "AT1G33430"
## [225] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420"
## [232] "AT1G34750" "AT1G35210" "AT1G35230" "AT1G35580" "AT1G35710" "AT1G35910" "AT1G36622"
## [239] "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910" "AT1G44130" "AT1G45145" "AT1G47056"
## [246] "AT1G47510" "AT1G48000" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870"
## [253] "AT1G49050" "AT1G49450" "AT1G49900" "AT1G50420" "AT1G50560" "AT1G50740" "AT1G51130"
## [260] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780" "AT1G51790" "AT1G51800" "AT1G51860"
## [267] "AT1G51890" "AT1G52200" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52855"
## [274] "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53620" "AT1G53625" "AT1G53830" "AT1G53920"
## [281] "AT1G54100" "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54890" "AT1G55610" "AT1G55790"
## [288] "AT1G56120" "AT1G56240" "AT1G56242" "AT1G56470" "AT1G56550" "AT1G56650" "AT1G56660"
## [295] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G59590" "AT1G59640" "AT1G59740"
## [302] "AT1G59950" "AT1G60190" "AT1G60420" "AT1G60610" "AT1G60730" "AT1G60890" "AT1G61065"
## [309] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [316] "AT1G61560" "AT1G61800" "AT1G61810" "AT1G61820" "AT1G62300" "AT1G62422" "AT1G62570"
## [323] "AT1G62580" "AT1G62840" "AT1G63245" "AT1G63440" "AT1G63460" "AT1G63720" "AT1G63740"
## [330] "AT1G63820" "AT1G63840" "AT1G64065" "AT1G64610" "AT1G64660" "AT1G65483" "AT1G65490"
## [337] "AT1G65610" "AT1G65690" "AT1G66040" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66410"
## [344] "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66880"
## [351] "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67190" "AT1G67195" "AT1G67360"
## [358] "AT1G67520" "AT1G67635" "AT1G67650" "AT1G67800" "AT1G67810" "AT1G67850" "AT1G67856"
## [365] "AT1G67970" "AT1G67980" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68440" "AT1G68620"
## [372] "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68820" "AT1G69050" "AT1G69260" "AT1G69480"
## [379] "AT1G69490" "AT1G69520" "AT1G69610" "AT1G69720" "AT1G69790" "AT1G69840" "AT1G69880"
## [386] "AT1G69930" "AT1G70220" "AT1G70480" "AT1G70640" "AT1G70690" "AT1G70810" "AT1G71100"
## [393] "AT1G71520" "AT1G71690" "AT1G71697" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125"
## [400] "AT1G72220" "AT1G72240" "AT1G72330" "AT1G72420" "AT1G72540" "AT1G72680" "AT1G72690"
## [407] "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [414] "AT1G72950" "AT1G73010" "AT1G73260" "AT1G73550" "AT1G73805" "AT1G73810" "AT1G73965"
## [421] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74710" "AT1G75170" "AT1G75510"
## [428] "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470" "AT1G76590"
## [435] "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000" "AT1G77145" "AT1G77280"
## [442] "AT1G77500" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78190" "AT1G78260"
## [449] "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78570" "AT1G78780" "AT1G79400" "AT1G79450"
## [456] "AT1G79680" "AT1G79900" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [463] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01540"
## [470] "AT2G01650" "AT2G01818" "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350"
## [477] "AT2G02390" "AT2G02870" "AT2G03270" "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100"
## [484] "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04900" "AT2G05320"
## [491] "AT2G05630" "AT2G05910" "AT2G05940" "AT2G06255" "AT2G07687" "AT2G07688" "AT2G07732"
## [498] "AT2G13790" "AT2G13810" "AT2G13960" "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620"
## [505] "AT2G15400" "AT2G15760" "AT2G15860" "AT2G16060" "AT2G16367" "AT2G16530" "AT2G16700"
## [512] "AT2G16710" "AT2G16720" "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17500"
## [519] "AT2G17720" "AT2G18000" "AT2G18660" "AT2G18690" "AT2G19190" "AT2G19690" "AT2G19710"
## [526] "AT2G19800" "AT2G20110" "AT2G20142" "AT2G20825" "AT2G21188" "AT2G21350" "AT2G21470"
## [533] "AT2G21510" "AT2G21780" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [540] "AT2G22770" "AT2G23030" "AT2G23110" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23680"
## [547] "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24240" "AT2G24285" "AT2G24850" "AT2G25130"
## [554] "AT2G25190" "AT2G25240" "AT2G25260" "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25625"
## [561] "AT2G25737" "AT2G26190" "AT2G26290" "AT2G26300" "AT2G26400" "AT2G26480" "AT2G26530"
## [568] "AT2G26560" "AT2G26750" "AT2G27389" "AT2G27390" "AT2G27430" "AT2G27510" "AT2G27690"
## [575] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28160" "AT2G28400" "AT2G28500" "AT2G28570"
## [582] "AT2G28890" "AT2G29070" "AT2G29110" "AT2G29350" "AT2G29400" "AT2G29460" "AT2G29470"
## [589] "AT2G29480" "AT2G29680" "AT2G29720" "AT2G29750" "AT2G29950" "AT2G29990" "AT2G30080"
## [596] "AT2G30140" "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018"
## [603] "AT2G31020" "AT2G31200" "AT2G31305" "AT2G31390" "AT2G31570" "AT2G31865" "AT2G31870"
## [610] "AT2G31880" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32160" "AT2G32190"
## [617] "AT2G32210" "AT2G32460" "AT2G32510" "AT2G32660" "AT2G32670" "AT2G32680" "AT2G33380"
## [624] "AT2G33520" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580" "AT2G34600" "AT2G34610"
## [631] "AT2G34940" "AT2G35000" "AT2G35070" "AT2G35290" "AT2G35550" "AT2G35730" "AT2G35810"
## [638] "AT2G35940" "AT2G35950" "AT2G36640" "AT2G36854" "AT2G37070" "AT2G37110" "AT2G37440"
## [645] "AT2G37670" "AT2G37750" "AT2G37760" "AT2G37870" "AT2G37980" "AT2G38240" "AT2G38250"
## [652] "AT2G38340" "AT2G38490" "AT2G38790" "AT2G38860" "AT2G39030" "AT2G39050" "AT2G39110"
## [659] "AT2G39210" "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39420" "AT2G39518" "AT2G39520"
## [666] "AT2G39530" "AT2G40095" "AT2G40113" "AT2G40140" "AT2G40330" "AT2G40340" "AT2G40435"
## [673] "AT2G40750" "AT2G41070" "AT2G41090" "AT2G41100" "AT2G41200" "AT2G41342" "AT2G41380"
## [680] "AT2G41410" "AT2G41660" "AT2G41835" "AT2G42060" "AT2G42350" "AT2G42560" "AT2G42950"
## [687] "AT2G43000" "AT2G43040" "AT2G43140" "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43820"
## [694] "AT2G44180" "AT2G44383" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G45170" "AT2G45210"
## [701] "AT2G45220" "AT2G45330" "AT2G45500" "AT2G45570" "AT2G45660" "AT2G45695" "AT2G45760"
## [708] "AT2G45770" "AT2G46040" "AT2G46270" "AT2G46380" "AT2G46400" "AT2G46430" "AT2G46440"
## [715] "AT2G46510" "AT2G46620" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46940" "AT2G46980"
## [722] "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47190" "AT2G47200" "AT2G47560" "AT2G47640"
## [729] "AT2G47720" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01080" "AT3G01290" "AT3G01830"
## [736] "AT3G01840" "AT3G01970" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02190" "AT3G02770"
## [743] "AT3G02800" "AT3G03310" "AT3G03341" "AT3G03440" "AT3G03450" "AT3G03460" "AT3G03470"
## [750] "AT3G03490" "AT3G03560" "AT3G03610" "AT3G03650" "AT3G03700" "AT3G03702" "AT3G04000"
## [757] "AT3G04060" "AT3G04070" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04620" "AT3G04640"
## [764] "AT3G05330" "AT3G05360" "AT3G05390" "AT3G05500" "AT3G05830" "AT3G05870" "AT3G06320"
## [771] "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06890" "AT3G07195" "AT3G07370" "AT3G07600"
## [778] "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720" "AT3G08760" "AT3G08870" "AT3G08990"
## [785] "AT3G09270" "AT3G09280" "AT3G09490" "AT3G09830" "AT3G09910" "AT3G09940" "AT3G09960"
## [792] "AT3G10010" "AT3G10310" "AT3G10320" "AT3G10420" "AT3G10490" "AT3G10500" "AT3G10640"
## [799] "AT3G10815" "AT3G11000" "AT3G11010" "AT3G11040" "AT3G11080" "AT3G11150" "AT3G11330"
## [806] "AT3G11340" "AT3G11480" "AT3G11580" "AT3G11820" "AT3G11840" "AT3G12040" "AT3G12220"
## [813] "AT3G12230" "AT3G12320" "AT3G12510" "AT3G12760" "AT3G12830" "AT3G13080" "AT3G13090"
## [820] "AT3G13100" "AT3G13235" "AT3G13380" "AT3G13430" "AT3G13432" "AT3G13520" "AT3G13610"
## [827] "AT3G13730" "AT3G13782" "AT3G13900" "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060"
## [834] "AT3G14130" "AT3G14280" "AT3G14430" "AT3G14440" "AT3G14470" "AT3G14475" "AT3G14560"
## [841] "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14840" "AT3G15355" "AT3G15500"
## [848] "AT3G15518" "AT3G15534" "AT3G15536" "AT3G15760" "AT3G15770" "AT3G16150" "AT3G16330"
## [855] "AT3G16565" "AT3G16980" "AT3G16990" "AT3G17000" "AT3G17380" "AT3G17420" "AT3G17609"
## [862] "AT3G17690" "AT3G17790" "AT3G17800" "AT3G17810" "AT3G17820" "AT3G18240" "AT3G18250"
## [869] "AT3G18260" "AT3G18560" "AT3G19010" "AT3G19270" "AT3G19390" "AT3G19580" "AT3G19615"
## [876] "AT3G19660" "AT3G19910" "AT3G19970" "AT3G20340" "AT3G21080" "AT3G21150" "AT3G21230"
## [883] "AT3G21295" "AT3G21320" "AT3G21520" "AT3G21700" "AT3G21810" "AT3G22160" "AT3G22235"
## [890] "AT3G22370" "AT3G22400" "AT3G22560" "AT3G22600" "AT3G22840" "AT3G22910" "AT3G22961"
## [897] "AT3G23120" "AT3G23240" "AT3G24320" "AT3G24460" "AT3G25010" "AT3G25020" "AT3G25250"
## [904] "AT3G25290" "AT3G25400" "AT3G25510" "AT3G25870" "AT3G25882" "AT3G26090" "AT3G26210"
## [911] "AT3G26220" "AT3G26440" "AT3G26460" "AT3G26470" "AT3G26500" "AT3G26600" "AT3G26690"
## [918] "AT3G26830" "AT3G26840" "AT3G27210" "AT3G27290" "AT3G27415" "AT3G27416" "AT3G27809"
## [925] "AT3G27810" "AT3G28007" "AT3G28210" "AT3G28340" "AT3G28480" "AT3G28510" "AT3G28540"
## [932] "AT3G28570" "AT3G28580" "AT3G28600" "AT3G28850" "AT3G28890" "AT3G28930" "AT3G29240"
## [939] "AT3G29250" "AT3G29575" "AT3G30775" "AT3G41768" "AT3G43250" "AT3G44300" "AT3G44326"
## [946] "AT3G44350" "AT3G44400" "AT3G44490" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [953] "AT3G45130" "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46280"
## [960] "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46690" "AT3G46930" "AT3G47090" "AT3G47340"
## [967] "AT3G47480" "AT3G47490" "AT3G47530" "AT3G47540" "AT3G47780" "AT3G48020" "AT3G48080"
## [974] "AT3G48090" "AT3G48240" "AT3G48390" "AT3G48490" "AT3G48520" "AT3G48570" "AT3G48580"
## [981] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48700" "AT3G48770" "AT3G48850" "AT3G49110"
## [988] "AT3G49120" "AT3G49130" "AT3G49540" "AT3G49580" "AT3G49645" "AT3G50260" "AT3G50280"
## [995] "AT3G50310" "AT3G50470" "AT3G50480" "AT3G50550" "AT3G50760" "AT3G50770"
## [ reached getOption("max.print") -- omitted 812 entries ]
##
## $`M12-V12_down`
## [1] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02750" "AT1G03050" "AT1G04310"
## [22] "AT1G04490" "AT1G04570" "AT1G04700" "AT1G04780" "AT1G05100" "AT1G05680" "AT1G05690"
## [29] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06180" "AT1G06570" "AT1G06620"
## [36] "AT1G07150" "AT1G07430" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07670"
## [43] "AT1G08050" "AT1G08860" "AT1G08920" "AT1G09180" "AT1G09240" "AT1G09350" "AT1G09530"
## [50] "AT1G09950" "AT1G10230" "AT1G10340" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [57] "AT1G10586" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G11185" "AT1G11400" "AT1G11480"
## [64] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12540" "AT1G13280" "AT1G13310" "AT1G13330"
## [71] "AT1G13340" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14120" "AT1G14260"
## [78] "AT1G15010" "AT1G15100" "AT1G15110" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [85] "AT1G15430" "AT1G15520" "AT1G15670" "AT1G16300" "AT1G16850" "AT1G17380" "AT1G17420"
## [92] "AT1G17500" "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G19160"
## [99] "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19490" "AT1G19570" "AT1G19640"
## [106] "AT1G19650" "AT1G19670" "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310"
## [113] "AT1G20440" "AT1G20450" "AT1G20970" "AT1G21000" "AT1G21410" "AT1G21520" "AT1G21525"
## [120] "AT1G21550" "AT1G22220" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490" "AT1G22770"
## [127] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23850" "AT1G24090" "AT1G24145"
## [134] "AT1G24147" "AT1G24210" "AT1G24600" "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500"
## [141] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26920" "AT1G26930" "AT1G26960"
## [148] "AT1G27110" "AT1G27300" "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050"
## [155] "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29050" "AT1G29195" "AT1G29290" "AT1G29330"
## [162] "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320"
## [169] "AT1G30620" "AT1G30814" "AT1G30850" "AT1G31120" "AT1G31290" "AT1G31550" "AT1G31900"
## [176] "AT1G32560" "AT1G32640" "AT1G32730" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33110"
## [183] "AT1G33260" "AT1G34180" "AT1G34420" "AT1G35210" "AT1G42980" "AT1G43160" "AT1G43245"
## [190] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G45145" "AT1G47510" "AT1G48000"
## [197] "AT1G48100" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G49050" "AT1G49450" "AT1G49520"
## [204] "AT1G50260" "AT1G50640" "AT1G51140" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G52030"
## [211] "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52760" "AT1G52770"
## [218] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53320" "AT1G53470" "AT1G53560"
## [225] "AT1G53620" "AT1G53625" "AT1G53760" "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100"
## [232] "AT1G54120" "AT1G54130" "AT1G54570" "AT1G54890" "AT1G55610" "AT1G56580" "AT1G57560"
## [239] "AT1G57610" "AT1G57630" "AT1G57650" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740"
## [246] "AT1G59950" "AT1G60190" "AT1G60270" "AT1G61065" "AT1G61110" "AT1G61120" "AT1G61140"
## [253] "AT1G61215" "AT1G61255" "AT1G61260" "AT1G61340" "AT1G61610" "AT1G61640" "AT1G61890"
## [260] "AT1G62840" "AT1G63245" "AT1G63720" "AT1G64380" "AT1G64610" "AT1G64620" "AT1G64660"
## [267] "AT1G64670" "AT1G65610" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66550" "AT1G66590"
## [274] "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G67070" "AT1G67420" "AT1G68200"
## [281] "AT1G68250" "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68620" "AT1G69260"
## [288] "AT1G69360" "AT1G69480" "AT1G69600" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69870"
## [295] "AT1G69930" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [302] "AT1G70800" "AT1G70810" "AT1G71100" "AT1G71690" "AT1G71697" "AT1G72120" "AT1G72210"
## [309] "AT1G72240" "AT1G72330" "AT1G72450" "AT1G72520" "AT1G72680" "AT1G72690" "AT1G72700"
## [316] "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010"
## [323] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73965"
## [330] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74710" "AT1G74950" "AT1G75020" "AT1G75220"
## [337] "AT1G75370" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580" "AT1G76040" "AT1G76062"
## [344] "AT1G76070" "AT1G76180" "AT1G76240" "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650"
## [351] "AT1G76760" "AT1G76790" "AT1G76980" "AT1G77200" "AT1G77280" "AT1G77450" "AT1G77500"
## [358] "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890" "AT1G78070" "AT1G78080" "AT1G78190"
## [365] "AT1G78210" "AT1G78380" "AT1G78570" "AT1G78940" "AT1G79170" "AT1G79270" "AT1G79400"
## [372] "AT1G79520" "AT1G79570" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [379] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80820" "AT1G80840" "AT1G80850" "AT2G01340"
## [386] "AT2G01450" "AT2G01890" "AT2G02310" "AT2G02340" "AT2G02870" "AT2G03470" "AT2G03760"
## [393] "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450" "AT2G05260" "AT2G05940" "AT2G06050"
## [400] "AT2G06255" "AT2G13650" "AT2G13960" "AT2G14290" "AT2G15760" "AT2G16720" "AT2G17500"
## [407] "AT2G17720" "AT2G18090" "AT2G18196" "AT2G18690" "AT2G18917" "AT2G20110" "AT2G20142"
## [414] "AT2G20825" "AT2G20880" "AT2G21188" "AT2G21350" "AT2G21640" "AT2G21780" "AT2G22200"
## [421] "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22860" "AT2G23030" "AT2G23110"
## [428] "AT2G23340" "AT2G23450" "AT2G23760" "AT2G23810" "AT2G24210" "AT2G24285" "AT2G24850"
## [435] "AT2G25130" "AT2G25240" "AT2G25460" "AT2G25625" "AT2G26480" "AT2G26530" "AT2G27310"
## [442] "AT2G27500" "AT2G27505" "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28200" "AT2G28400"
## [449] "AT2G28570" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470" "AT2G29670" "AT2G30020"
## [456] "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395" "AT2G30400" "AT2G30540"
## [463] "AT2G30550" "AT2G30720" "AT2G30750" "AT2G30820" "AT2G30830" "AT2G31180" "AT2G31380"
## [470] "AT2G31940" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32210" "AT2G32235"
## [477] "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33380" "AT2G34010" "AT2G34070"
## [484] "AT2G34080" "AT2G34500" "AT2G34600" "AT2G34810" "AT2G35290" "AT2G35550" "AT2G35700"
## [491] "AT2G35710" "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36080" "AT2G36380"
## [498] "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854" "AT2G37040" "AT2G37170"
## [505] "AT2G37180" "AT2G37440" "AT2G37590" "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870"
## [512] "AT2G37980" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530"
## [519] "AT2G38640" "AT2G38750" "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39210" "AT2G39250"
## [526] "AT2G39350" "AT2G39520" "AT2G39725" "AT2G39800" "AT2G39980" "AT2G40140" "AT2G40340"
## [533] "AT2G40435" "AT2G40620" "AT2G40750" "AT2G41070" "AT2G41410" "AT2G41540" "AT2G41660"
## [540] "AT2G41730" "AT2G41835" "AT2G41870" "AT2G42150" "AT2G42350" "AT2G42530" "AT2G42540"
## [547] "AT2G42560" "AT2G42760" "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43320" "AT2G43535"
## [554] "AT2G43550" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44810" "AT2G44840" "AT2G44940"
## [561] "AT2G45210" "AT2G45760" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [568] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [575] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47560" "AT2G47670" "AT2G47770"
## [582] "AT2G47780" "AT2G47950" "AT3G01280" "AT3G01290" "AT3G01830" "AT3G01840" "AT3G02140"
## [589] "AT3G02150" "AT3G02160" "AT3G02510" "AT3G02875" "AT3G02990" "AT3G03310" "AT3G03440"
## [596] "AT3G03650" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060" "AT3G04181" "AT3G04420"
## [603] "AT3G04630" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05800"
## [610] "AT3G05810" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06420" "AT3G06490" "AT3G06500"
## [617] "AT3G06890" "AT3G07340" "AT3G07350" "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720"
## [624] "AT3G08990" "AT3G09032" "AT3G09280" "AT3G09370" "AT3G09450" "AT3G09830" "AT3G09910"
## [631] "AT3G09940" "AT3G10815" "AT3G10985" "AT3G11150" "AT3G11170" "AT3G11210" "AT3G11330"
## [638] "AT3G11340" "AT3G11410" "AT3G11420" "AT3G11450" "AT3G11470" "AT3G11480" "AT3G11580"
## [645] "AT3G11840" "AT3G12320" "AT3G12830" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13432"
## [652] "AT3G13610" "AT3G13730" "AT3G13910" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14560"
## [659] "AT3G14840" "AT3G14870" "AT3G15210" "AT3G15500" "AT3G15534" "AT3G15760" "AT3G15990"
## [666] "AT3G16150" "AT3G16320" "AT3G16330" "AT3G16400" "AT3G16450" "AT3G16460" "AT3G16500"
## [673] "AT3G16620" "AT3G16990" "AT3G17000" "AT3G17120" "AT3G17380" "AT3G17510" "AT3G17520"
## [680] "AT3G17609" "AT3G17690" "AT3G17800" "AT3G17810" "AT3G17860" "AT3G17910" "AT3G18295"
## [687] "AT3G18560" "AT3G19270" "AT3G19580" "AT3G19970" "AT3G21080" "AT3G21230" "AT3G21660"
## [694] "AT3G21670" "AT3G21700" "AT3G21890" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G22370"
## [701] "AT3G22415" "AT3G22550" "AT3G22560" "AT3G22660" "AT3G22890" "AT3G22910" "AT3G24420"
## [708] "AT3G24518" "AT3G24520" "AT3G25250" "AT3G25570" "AT3G25572" "AT3G25760" "AT3G25770"
## [715] "AT3G25780" "AT3G25870" "AT3G25882" "AT3G25890" "AT3G25910" "AT3G26460" "AT3G26690"
## [722] "AT3G26830" "AT3G26840" "AT3G27170" "AT3G27210" "AT3G27415" "AT3G27416" "AT3G27809"
## [729] "AT3G27810" "AT3G27870" "AT3G27960" "AT3G28007" "AT3G28210" "AT3G28220" "AT3G28580"
## [736] "AT3G28600" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G30380" "AT3G41979" "AT3G43250"
## [743] "AT3G43270" "AT3G43440" "AT3G44326" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [750] "AT3G44870" "AT3G45040" "AT3G45130" "AT3G45140" "AT3G45638" "AT3G46080" "AT3G46510"
## [757] "AT3G46640" "AT3G46650" "AT3G46658" "AT3G46660" "AT3G46668" "AT3G46670" "AT3G46690"
## [764] "AT3G47340" "AT3G47420" "AT3G47500" "AT3G47540" "AT3G47730" "AT3G47750" "AT3G47960"
## [771] "AT3G48080" "AT3G48240" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520"
## [778] "AT3G48530" "AT3G48660" "AT3G48870" "AT3G49400" "AT3G49870" "AT3G50260" "AT3G50310"
## [785] "AT3G50410" "AT3G50470" "AT3G50570" "AT3G50620" "AT3G50650" "AT3G50760" "AT3G50770"
## [792] "AT3G50800" "AT3G50910" "AT3G50930" "AT3G50970" "AT3G51090" "AT3G51450" "AT3G52100"
## [799] "AT3G52290" "AT3G52310" "AT3G52430" "AT3G52470" "AT3G52540" "AT3G52740" "AT3G52770"
## [806] "AT3G52870" "AT3G53230" "AT3G53232" "AT3G53600" "AT3G54320" "AT3G54820" "AT3G54950"
## [813] "AT3G55060" "AT3G55110" "AT3G55290" "AT3G55500" "AT3G55640" "AT3G55880" "AT3G55970"
## [820] "AT3G56260" "AT3G56275" "AT3G56400" "AT3G56620" "AT3G56710" "AT3G56891" "AT3G57010"
## [827] "AT3G57020" "AT3G57157" "AT3G57380" "AT3G57450" "AT3G57460" "AT3G57480" "AT3G57520"
## [834] "AT3G57540" "AT3G57760" "AT3G57880" "AT3G57950" "AT3G58795" "AT3G59050" "AT3G59052"
## [841] "AT3G59710" "AT3G59800" "AT3G59900" "AT3G59940" "AT3G60160" "AT3G60180" "AT3G60420"
## [848] "AT3G60450" "AT3G60490" "AT3G60961" "AT3G60966" "AT3G61113" "AT3G61185" "AT3G61190"
## [855] "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61630" "AT3G61890" "AT3G61900"
## [862] "AT3G61920" "AT3G61930" "AT3G62760" "AT3G63010" "AT3G63060" "AT3G63380" "AT4G00430"
## [869] "AT4G01026" "AT4G01030" "AT4G01360" "AT4G01535" "AT4G01540" "AT4G01850" "AT4G01895"
## [876] "AT4G02220" "AT4G02320" "AT4G02360" "AT4G02380" "AT4G02850" "AT4G03320" "AT4G04223"
## [883] "AT4G05010" "AT4G05020" "AT4G05030" "AT4G05100" "AT4G05497" "AT4G06534" "AT4G06744"
## [890] "AT4G07950" "AT4G08170" "AT4G08555" "AT4G08870" "AT4G09460" "AT4G10290" "AT4G10390"
## [897] "AT4G11140" "AT4G11690" "AT4G11890" "AT4G11911" "AT4G12000" "AT4G12005" "AT4G12040"
## [904] "AT4G12410" "AT4G12710" "AT4G12720" "AT4G12735" "AT4G13110" "AT4G13860" "AT4G14365"
## [911] "AT4G15100" "AT4G15200" "AT4G15230" "AT4G15248" "AT4G15280" "AT4G15660" "AT4G15670"
## [918] "AT4G15680" "AT4G15690" "AT4G15700" "AT4G15770" "AT4G15940" "AT4G15990" "AT4G16000"
## [925] "AT4G16680" "AT4G16690" "AT4G16730" "AT4G16740" "AT4G16760" "AT4G16820" "AT4G17230"
## [932] "AT4G17240" "AT4G18160" "AT4G18170" "AT4G18360" "AT4G18440" "AT4G18950" "AT4G20830"
## [939] "AT4G20970" "AT4G21060" "AT4G21120" "AT4G21200" "AT4G21215" "AT4G21390" "AT4G21440"
## [946] "AT4G21570" "AT4G21680" "AT4G21780" "AT4G21790" "AT4G21830" "AT4G21850" "AT4G22070"
## [953] "AT4G22590" "AT4G22592" "AT4G22620" "AT4G22758" "AT4G23050" "AT4G23060" "AT4G23420"
## [960] "AT4G23450" "AT4G23600" "AT4G23680" "AT4G24010" "AT4G24026" "AT4G24030" "AT4G24040"
## [967] "AT4G24110" "AT4G24340" "AT4G24380" "AT4G24960" "AT4G25390" "AT4G25433" "AT4G25480"
## [974] "AT4G25670" "AT4G25672" "AT4G25690" "AT4G25692" "AT4G26060" "AT4G26070" "AT4G26080"
## [981] "AT4G26120" "AT4G26470" "AT4G26810" "AT4G27140" "AT4G27350" "AT4G27410" "AT4G27530"
## [988] "AT4G27590" "AT4G27830" "AT4G27860" "AT4G27870" "AT4G28085" "AT4G28088" "AT4G28140"
## [995] "AT4G28150" "AT4G28290" "AT4G28300" "AT4G29740" "AT4G29930" "AT4G29950"
## [ reached getOption("max.print") -- omitted 430 entries ]
##
## $`A12-V12_down`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" "AT1G01610" "AT1G01620" "AT1G01720"
## [8] "AT1G01900" "AT1G02205" "AT1G02400" "AT1G02405" "AT1G02460" "AT1G03020" "AT1G04220"
## [15] "AT1G07150" "AT1G07610" "AT1G08200" "AT1G09530" "AT1G09950" "AT1G10370" "AT1G10530"
## [22] "AT1G10560" "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12420" "AT1G13740"
## [29] "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G15080" "AT1G15100" "AT1G15170"
## [36] "AT1G15180" "AT1G15670" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17420" "AT1G17940"
## [43] "AT1G19570" "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030"
## [50] "AT1G20070" "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G22550" "AT1G22770"
## [57] "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27030" "AT1G27640" "AT1G27730" "AT1G28010" "AT1G28050" "AT1G28360" "AT1G29330"
## [71] "AT1G30240" "AT1G31710" "AT1G32860" "AT1G32910" "AT1G34210" "AT1G43160" "AT1G44350"
## [78] "AT1G48100" "AT1G49450" "AT1G49650" "AT1G50640" "AT1G51090" "AT1G51500" "AT1G51780"
## [85] "AT1G52030" "AT1G52720" "AT1G53170" "AT1G54010" "AT1G54030" "AT1G54040" "AT1G54095"
## [92] "AT1G55260" "AT1G55490" "AT1G56580" "AT1G58270" "AT1G59740" "AT1G60190" "AT1G60270"
## [99] "AT1G61110" "AT1G61340" "AT1G62440" "AT1G62975" "AT1G63040" "AT1G64150" "AT1G64380"
## [106] "AT1G64390" "AT1G64620" "AT1G64670" "AT1G65860" "AT1G66280" "AT1G67420" "AT1G68350"
## [113] "AT1G68500" "AT1G69140" "AT1G69295" "AT1G69530" "AT1G69600" "AT1G69870" "AT1G70300"
## [120] "AT1G70640" "AT1G70700" "AT1G72040" "AT1G72140" "AT1G72180" "AT1G73210" "AT1G73390"
## [127] "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74950" "AT1G75370" "AT1G75580"
## [134] "AT1G75800" "AT1G76610" "AT1G76790" "AT1G77680" "AT1G78060" "AT1G78070" "AT1G78080"
## [141] "AT1G79170" "AT1G79570" "AT1G80060" "AT1G80120" "AT1G80530" "AT1G80580" "AT1G80820"
## [148] "AT1G80840" "AT1G80850" "AT2G01830" "AT2G01890" "AT2G03760" "AT2G04080" "AT2G06050"
## [155] "AT2G06255" "AT2G16630" "AT2G17450" "AT2G18969" "AT2G18970" "AT2G20880" "AT2G21140"
## [162] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23340" "AT2G23760"
## [169] "AT2G24210" "AT2G25130" "AT2G27510" "AT2G27820" "AT2G27830" "AT2G28790" "AT2G29440"
## [176] "AT2G29450" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G30040" "AT2G30360" "AT2G30362"
## [183] "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31380" "AT2G32235" "AT2G32240" "AT2G32510"
## [190] "AT2G32990" "AT2G33380" "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960"
## [197] "AT2G36380" "AT2G36590" "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885"
## [204] "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G38530"
## [211] "AT2G38540" "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39980" "AT2G40620"
## [218] "AT2G41170" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [225] "AT2G43018" "AT2G43020" "AT2G43535" "AT2G43550" "AT2G44578" "AT2G44640" "AT2G44840"
## [232] "AT2G45470" "AT2G45960" "AT2G46370" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [239] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G03190" "AT3G03780"
## [246] "AT3G03980" "AT3G04000" "AT3G04010" "AT3G04630" "AT3G05640" "AT3G05800" "AT3G05810"
## [253] "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G08030" "AT3G08670"
## [260] "AT3G09032" "AT3G09940" "AT3G10985" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [267] "AT3G12120" "AT3G12145" "AT3G12920" "AT3G13230" "AT3G14067" "AT3G14870" "AT3G15210"
## [274] "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450" "AT3G16460" "AT3G16500"
## [281] "AT3G17120" "AT3G17510" "AT3G17860" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G21670"
## [288] "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22560" "AT3G23810" "AT3G24518" "AT3G24520"
## [295] "AT3G25700" "AT3G25760" "AT3G25770" "AT3G25780" "AT3G26060" "AT3G26520" "AT3G27170"
## [302] "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28600" "AT3G43250" "AT3G43270" "AT3G44870"
## [309] "AT3G45140" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47960" "AT3G48350"
## [316] "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520" "AT3G48720" "AT3G49870" "AT3G50260"
## [323] "AT3G50410" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G52290" "AT3G53370" "AT3G53420"
## [330] "AT3G54820" "AT3G54830" "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260"
## [337] "AT3G56270" "AT3G57020" "AT3G57157" "AT3G57760" "AT3G59050" "AT3G59052" "AT3G59710"
## [344] "AT3G59940" "AT3G59970" "AT3G60220" "AT3G60490" "AT3G61420" "AT3G61430" "AT3G61490"
## [351] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62700" "AT3G62860" "AT3G63200" "AT4G00360"
## [358] "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030" "AT4G02360" "AT4G04840" "AT4G05010"
## [365] "AT4G05020" "AT4G05100" "AT4G06534" "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08870"
## [372] "AT4G10290" "AT4G10390" "AT4G11320" "AT4G12000" "AT4G12005" "AT4G12030" "AT4G12410"
## [379] "AT4G13770" "AT4G13860" "AT4G14040" "AT4G14440" "AT4G15100" "AT4G15210" "AT4G15770"
## [386] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G18440"
## [393] "AT4G21060" "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21780" "AT4G21790" "AT4G22010"
## [400] "AT4G22620" "AT4G23060" "AT4G23420" "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960"
## [407] "AT4G24972" "AT4G25433" "AT4G25700" "AT4G25830" "AT4G26700" "AT4G27350" "AT4G27410"
## [414] "AT4G27520" "AT4G27590" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G29740" "AT4G30180"
## [421] "AT4G30210" "AT4G30440" "AT4G30530" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780"
## [428] "AT4G32785" "AT4G33220" "AT4G33467" "AT4G33970" "AT4G34200" "AT4G34290" "AT4G34650"
## [435] "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320" "AT4G35480" "AT4G35550" "AT4G35560"
## [442] "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36780" "AT4G36900" "AT4G37409" "AT4G37410"
## [449] "AT4G37760" "AT4G37990" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810" "AT4G39330"
## [456] "AT4G39350" "AT4G39980" "AT5G01210" "AT5G01215" "AT5G01760" "AT5G01840" "AT5G02170"
## [463] "AT5G02460" "AT5G03030" "AT5G04200" "AT5G04250" "AT5G04530" "AT5G04770" "AT5G05440"
## [470] "AT5G06570" "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07690" "AT5G07700" "AT5G08640"
## [477] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10720" "AT5G12860" "AT5G13220" "AT5G13400"
## [484] "AT5G14200" "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240"
## [491] "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17460" "AT5G17490" "AT5G17520"
## [498] "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20740" "AT5G21280" "AT5G22500"
## [505] "AT5G22740" "AT5G23010" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155"
## [512] "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780" "AT5G24920" "AT5G26260"
## [519] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G38005" "AT5G38120" "AT5G38130" "AT5G39320"
## [526] "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G41120" "AT5G41315" "AT5G41590"
## [533] "AT5G41600" "AT5G42650" "AT5G42900" "AT5G43170" "AT5G44050" "AT5G44210" "AT5G44420"
## [540] "AT5G45950" "AT5G47240" "AT5G47330" "AT5G52050" "AT5G52310" "AT5G52882" "AT5G53200"
## [547] "AT5G53760" "AT5G54300" "AT5G55090" "AT5G55180" "AT5G55530" "AT5G56760" "AT5G56880"
## [554] "AT5G57100" "AT5G57260" "AT5G57800" "AT5G58480" "AT5G58900" "AT5G59030" "AT5G59050"
## [561] "AT5G59080" "AT5G59090" "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59760" "AT5G60850"
## [568] "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [575] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63450" "AT5G64170"
## [582] "AT5G64260" "AT5G64280" "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280"
## [589] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66590" "AT5G66650" "AT5G67070" "AT5G67180"
## [596] "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"DEGlist <- DEGlist[sapply(DEGlist, length) > 0]
str(DEGlist) # now list of 19 (blanks are gone)## List of 27
## $ M1-A1_up_down : chr [1:24] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## $ M1-V1_up_down : chr [1:1059] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## $ A1-V1_up_down : chr [1:50] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" ...
## $ M6-A6_up_down : chr [1:2373] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" ...
## $ M6-V6_up_down : chr [1:1311] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" ...
## $ A6-V6_up_down : chr [1:539] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## $ M12-A12_up_down: chr [1:3203] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" ...
## $ M12-V12_up_down: chr [1:2228] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" ...
## $ A12-V12_up_down: chr [1:988] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" ...
## $ M1-A1_up : chr [1:2] "AT3G21870" "ATCG01310"
## $ M1-V1_up : chr [1:615] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" ...
## $ A1-V1_up : chr [1:29] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" ...
## $ M6-A6_up : chr [1:1030] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" ...
## $ M6-V6_up : chr [1:739] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" ...
## $ A6-V6_up : chr [1:392] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" ...
## $ M12-A12_up : chr [1:1391] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" ...
## $ M12-V12_up : chr [1:798] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" ...
## $ A12-V12_up : chr [1:388] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" ...
## $ M1-A1_down : chr [1:22] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" ...
## $ M1-V1_down : chr [1:444] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" ...
## $ A1-V1_down : chr [1:21] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" ...
## $ M6-A6_down : chr [1:1343] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" ...
## $ M6-V6_down : chr [1:572] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" ...
## $ A6-V6_down : chr [1:147] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" ...
## $ M12-A12_down : chr [1:1812] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" ...
## $ M12-V12_down : chr [1:1430] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" ...
## $ A12-V12_down : chr [1:600] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" ...DEGlist## $`M1-A1_up_down`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT3G21870" "AT4G12480" "AT4G18540" "AT4G23550"
## [17] "AT4G33980" "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100" "ATCG01310"
##
## $`M1-V1_up_down`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G01640" "AT1G02710" "AT1G02820" "AT1G02920" "AT1G02930" "AT1G03050" "AT1G03055"
## [15] "AT1G03300" "AT1G03360" "AT1G03905" "AT1G04220" "AT1G04250" "AT1G04280" "AT1G04530"
## [22] "AT1G04550" "AT1G04620" "AT1G04660" "AT1G04770" "AT1G04990" "AT1G05020" "AT1G05300"
## [29] "AT1G05560" "AT1G05562" "AT1G05680" "AT1G05710" "AT1G06460" "AT1G07010" "AT1G07040"
## [36] "AT1G07050" "AT1G07160" "AT1G07180" "AT1G07420" "AT1G07485" "AT1G07490" "AT1G08610"
## [43] "AT1G08980" "AT1G09180" "AT1G09820" "AT1G09900" "AT1G10040" "AT1G10070" "AT1G10200"
## [50] "AT1G10460" "AT1G10710" "AT1G10960" "AT1G10990" "AT1G11200" "AT1G11362" "AT1G11925"
## [57] "AT1G11950" "AT1G12330" "AT1G12370" "AT1G12710" "AT1G12730" "AT1G13030" "AT1G13080"
## [64] "AT1G13110" "AT1G13270" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150"
## [71] "AT1G14170" "AT1G14345" "AT1G14540" "AT1G14840" "AT1G14870" "AT1G15125" "AT1G15290"
## [78] "AT1G15510" "AT1G15550" "AT1G15670" "AT1G15870" "AT1G15890" "AT1G16090" "AT1G16350"
## [85] "AT1G16390" "AT1G16730" "AT1G17050" "AT1G17665" "AT1G18800" "AT1G19130" "AT1G19140"
## [92] "AT1G19150" "AT1G19370" "AT1G19450" "AT1G19700" "AT1G20010" "AT1G20620" "AT1G20630"
## [99] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G21500" "AT1G22180"
## [106] "AT1G22370" "AT1G22480" "AT1G22490" "AT1G22590" "AT1G22770" "AT1G22850" "AT1G23100"
## [113] "AT1G23410" "AT1G23740" "AT1G24148" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26220"
## [120] "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26420" "AT1G26665" "AT1G26761" "AT1G27020"
## [127] "AT1G27120" "AT1G27480" "AT1G27630" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G29160"
## [134] "AT1G29600" "AT1G29660" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700"
## [141] "AT1G30755" "AT1G30960" "AT1G31690" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760"
## [148] "AT1G32900" "AT1G33030" "AT1G33170" "AT1G33410" "AT1G34380" "AT1G42550" "AT1G42970"
## [155] "AT1G44000" "AT1G44446" "AT1G48100" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48480"
## [162] "AT1G48570" "AT1G48605" "AT1G49010" "AT1G49230" "AT1G49430" "AT1G49490" "AT1G49660"
## [169] "AT1G49720" "AT1G50840" "AT1G51080" "AT1G51100" "AT1G51310" "AT1G51610" "AT1G51620"
## [176] "AT1G51850" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52200" "AT1G52830" "AT1G53035"
## [183] "AT1G53090" "AT1G53100" "AT1G53625" "AT1G54500" "AT1G55260" "AT1G55450" "AT1G55960"
## [190] "AT1G56140" "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G58520"
## [197] "AT1G59700" "AT1G59950" "AT1G60730" "AT1G61300" "AT1G61360" "AT1G61420" "AT1G61550"
## [204] "AT1G61560" "AT1G62170" "AT1G62180" "AT1G62630" "AT1G62720" "AT1G62750" "AT1G62760"
## [211] "AT1G62960" "AT1G63180" "AT1G63250" "AT1G64110" "AT1G64220" "AT1G64500" "AT1G64600"
## [218] "AT1G64670" "AT1G64680" "AT1G64760" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [225] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65820" "AT1G65920"
## [232] "AT1G66130" "AT1G66330" "AT1G66540" "AT1G66700" "AT1G66725" "AT1G66780" "AT1G66840"
## [239] "AT1G67370" "AT1G67590" "AT1G67750" "AT1G67970" "AT1G67980" "AT1G68050" "AT1G68440"
## [246] "AT1G69200" "AT1G69520" "AT1G70000" "AT1G70220" "AT1G70250" "AT1G70580" "AT1G70800"
## [253] "AT1G71000" "AT1G71400" "AT1G71520" "AT1G71850" "AT1G72040" "AT1G72270" "AT1G72330"
## [260] "AT1G72416" "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870"
## [267] "AT1G73890" "AT1G74010" "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280"
## [274] "AT1G75830" "AT1G76240" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77580" "AT1G77810"
## [281] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G79440" "AT1G79460"
## [288] "AT1G79680" "AT1G80270" "AT1G80760" "AT2G01280" "AT2G01540" "AT2G01890" "AT2G02010"
## [295] "AT2G02100" "AT2G02150" "AT2G02220" "AT2G02230" "AT2G02410" "AT2G02930" "AT2G03550"
## [302] "AT2G04030" "AT2G04039" "AT2G04790" "AT2G05160" "AT2G05630" "AT2G05753" "AT2G11890"
## [309] "AT2G14170" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G15890" "AT2G16365" "AT2G17740"
## [316] "AT2G17972" "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19190" "AT2G19450" "AT2G19670"
## [323] "AT2G20020" "AT2G20585" "AT2G21130" "AT2G21185" "AT2G21187" "AT2G21320" "AT2G21330"
## [330] "AT2G21660" "AT2G22240" "AT2G22450" "AT2G22970" "AT2G22980" "AT2G23030" "AT2G23110"
## [337] "AT2G23290" "AT2G23340" "AT2G23430" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440"
## [344] "AT2G24540" "AT2G24545" "AT2G24570" "AT2G24580" "AT2G24645" "AT2G24762" "AT2G24820"
## [351] "AT2G25530" "AT2G25680" "AT2G25730" "AT2G25930" "AT2G26080" "AT2G26560" "AT2G26650"
## [358] "AT2G26692" "AT2G27200" "AT2G27420" "AT2G28190" "AT2G28790" "AT2G28930" "AT2G29090"
## [365] "AT2G29720" "AT2G29740" "AT2G30100" "AT2G30150" "AT2G30395" "AT2G30424" "AT2G30520"
## [372] "AT2G30750" "AT2G30760" "AT2G30770" "AT2G31010" "AT2G31380" "AT2G31750" "AT2G31751"
## [379] "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33830" "AT2G33855" "AT2G35760"
## [386] "AT2G35950" "AT2G35980" "AT2G36000" "AT2G36390" "AT2G36590" "AT2G36750" "AT2G36800"
## [393] "AT2G36815" "AT2G37240" "AT2G37430" "AT2G37460" "AT2G37630" "AT2G37940" "AT2G37970"
## [400] "AT2G38465" "AT2G38750" "AT2G38760" "AT2G38860" "AT2G39200" "AT2G39380" "AT2G39400"
## [407] "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39730" "AT2G39900" "AT2G39920"
## [414] "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G41050" "AT2G41250" "AT2G41290"
## [421] "AT2G41660" "AT2G42360" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43590" "AT2G43620"
## [428] "AT2G43650" "AT2G43710" "AT2G43940" "AT2G44080" "AT2G45340" "AT2G46670" "AT2G46790"
## [435] "AT2G46810" "AT2G46830" "AT2G46940" "AT2G47370" "AT2G47390" "AT2G47450" "AT2G47485"
## [442] "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180" "AT3G01440" "AT3G02800"
## [449] "AT3G02830" "AT3G04140" "AT3G04420" "AT3G04950" "AT3G05390" "AT3G06145" "AT3G06520"
## [456] "AT3G06750" "AT3G06920" "AT3G07310" "AT3G07640" "AT3G07650" "AT3G07750" "AT3G07770"
## [463] "AT3G09160" "AT3G09162" "AT3G09190" "AT3G09390" "AT3G09405" "AT3G09600" "AT3G09650"
## [470] "AT3G10040" "AT3G10110" "AT3G10410" "AT3G10525" "AT3G11020" "AT3G11090" "AT3G11110"
## [477] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G12320" "AT3G13450" "AT3G13470"
## [484] "AT3G13700" "AT3G13710" "AT3G14360" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15356"
## [491] "AT3G15518" "AT3G15540" "AT3G15620" "AT3G15850" "AT3G15990" "AT3G16180" "AT3G16360"
## [498] "AT3G16520" "AT3G16530" "AT3G16565" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840"
## [505] "AT3G18080" "AT3G18750" "AT3G19000" "AT3G19210" "AT3G19260" "AT3G19440" "AT3G19450"
## [512] "AT3G19480" "AT3G19615" "AT3G20410" "AT3G21240" "AT3G21390" "AT3G21460" "AT3G21470"
## [519] "AT3G21890" "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G22460" "AT3G23090"
## [526] "AT3G23210" "AT3G23280" "AT3G23510" "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190"
## [533] "AT3G24460" "AT3G25030" "AT3G25670" "AT3G26500" "AT3G26570" "AT3G26670" "AT3G26680"
## [540] "AT3G26740" "AT3G26830" "AT3G27210" "AT3G27300" "AT3G27350" "AT3G27415" "AT3G27416"
## [547] "AT3G28040" "AT3G28370" "AT3G28540" "AT3G30460" "AT3G30720" "AT3G43670" "AT3G43790"
## [554] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46090"
## [561] "AT3G46440" "AT3G46640" "AT3G46690" "AT3G46900" "AT3G47070" "AT3G47360" "AT3G47420"
## [568] "AT3G47430" "AT3G47800" "AT3G47860" "AT3G48280" "AT3G48490" "AT3G48560" "AT3G48660"
## [575] "AT3G48690" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G49240" "AT3G49470" "AT3G49570"
## [582] "AT3G50120" "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50685" "AT3G50810" "AT3G51330"
## [589] "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52450" "AT3G52720" "AT3G52920" "AT3G53700"
## [596] "AT3G53830" "AT3G53920" "AT3G54150" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [603] "AT3G54720" "AT3G54900" "AT3G55150" "AT3G55450" "AT3G56080" "AT3G56160" "AT3G56290"
## [610] "AT3G56300" "AT3G56330" "AT3G56500" "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180"
## [617] "AT3G57190" "AT3G57400" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G58840" "AT3G58990"
## [624] "AT3G59220" "AT3G59250" "AT3G59330" "AT3G59350" "AT3G59400" "AT3G59700" "AT3G59900"
## [631] "AT3G61160" "AT3G61220" "AT3G61780" "AT3G61880" "AT3G62150" "AT3G63160" "AT3G63200"
## [638] "AT3G63380" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [645] "AT4G01080" "AT4G01130" "AT4G01250" "AT4G01535" "AT4G01750" "AT4G02380" "AT4G02520"
## [652] "AT4G02630" "AT4G02990" "AT4G03460" "AT4G03600" "AT4G04020" "AT4G04330" "AT4G04610"
## [659] "AT4G05110" "AT4G09020" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620"
## [666] "AT4G11100" "AT4G11175" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12390" "AT4G12470"
## [673] "AT4G12480" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14270" "AT4G14440"
## [680] "AT4G14690" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550"
## [687] "AT4G15810" "AT4G16140" "AT4G16146" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16820"
## [694] "AT4G16980" "AT4G17140" "AT4G17180" "AT4G17680" "AT4G17880" "AT4G17970" "AT4G18430"
## [701] "AT4G18540" "AT4G18800" "AT4G19120" "AT4G19170" "AT4G19390" "AT4G19410" "AT4G19810"
## [708] "AT4G19880" "AT4G20000" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990" "AT4G22710"
## [715] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23680" "AT4G23770" "AT4G23810" "AT4G24540"
## [722] "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780" "AT4G25810" "AT4G25900" "AT4G26270"
## [729] "AT4G26600" "AT4G26670" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27130" "AT4G27700"
## [736] "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G28660" "AT4G28700" "AT4G28730"
## [743] "AT4G28740" "AT4G28780" "AT4G29600" "AT4G30470" "AT4G30610" "AT4G30690" "AT4G30960"
## [750] "AT4G31050" "AT4G31210" "AT4G31390" "AT4G31550" "AT4G31620" "AT4G31870" "AT4G32340"
## [757] "AT4G32770" "AT4G33010" "AT4G33160" "AT4G33560" "AT4G33980" "AT4G33985" "AT4G34550"
## [764] "AT4G34580" "AT4G34610" "AT4G34630" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990"
## [771] "AT4G35090" "AT4G35180" "AT4G35380" "AT4G36580" "AT4G36760" "AT4G36770" "AT4G36950"
## [778] "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37650" "AT4G37800" "AT4G37925"
## [785] "AT4G38000" "AT4G38060" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G38680" "AT4G38960"
## [792] "AT4G38970" "AT4G39230" "AT4G39270" "AT4G39330" "AT4G39470" "AT4G39510" "AT4G39800"
## [799] "AT4G40070" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [806] "AT5G02160" "AT5G02180" "AT5G02230" "AT5G02260" "AT5G02540" "AT5G02780" "AT5G02830"
## [813] "AT5G02950" "AT5G03460" "AT5G03555" "AT5G03760" "AT5G05190" "AT5G05270" "AT5G05410"
## [820] "AT5G05580" "AT5G06550" "AT5G06690" "AT5G06790" "AT5G08380" "AT5G08490" "AT5G08610"
## [827] "AT5G08720" "AT5G08760" "AT5G09500" "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470"
## [834] "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G11210" "AT5G11670" "AT5G12080"
## [841] "AT5G12110" "AT5G12880" "AT5G12930" "AT5G13400" "AT5G13730" "AT5G13770" "AT5G13920"
## [848] "AT5G14350" "AT5G14560" "AT5G14580" "AT5G14610" "AT5G14740" "AT5G15030" "AT5G15600"
## [855] "AT5G15640" "AT5G15840" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340"
## [862] "AT5G16380" "AT5G16530" "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18470" "AT5G18525"
## [869] "AT5G18540" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300" "AT5G19730" "AT5G19850"
## [876] "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380" "AT5G20950" "AT5G21100"
## [883] "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23235" "AT5G23240" "AT5G23575" "AT5G23660"
## [890] "AT5G23730" "AT5G23750" "AT5G23760" "AT5G24030" "AT5G24105" "AT5G24110" "AT5G24120"
## [897] "AT5G24150" "AT5G24165" "AT5G24240" "AT5G24280" "AT5G24380" "AT5G24470" "AT5G24580"
## [904] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25340" "AT5G25590"
## [911] "AT5G25630" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G28500"
## [918] "AT5G33290" "AT5G34780" "AT5G37740" "AT5G38420" "AT5G38430" "AT5G38895" "AT5G39410"
## [925] "AT5G39580" "AT5G39710" "AT5G40240" "AT5G40760" "AT5G41260" "AT5G42900" "AT5G43400"
## [932] "AT5G43630" "AT5G43850" "AT5G44010" "AT5G44190" "AT5G44380" "AT5G44480" "AT5G44490"
## [939] "AT5G44910" "AT5G45800" "AT5G46050" "AT5G46220" "AT5G46580" "AT5G46600" "AT5G46860"
## [946] "AT5G46871" "AT5G47220" "AT5G47360" "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48250"
## [953] "AT5G48430" "AT5G48850" "AT5G48910" "AT5G49015" "AT5G49100" "AT5G49740" "AT5G49900"
## [960] "AT5G50100" "AT5G50200" "AT5G51540" "AT5G51570" "AT5G51720" "AT5G51790" "AT5G52570"
## [967] "AT5G53110" "AT5G53170" "AT5G53200" "AT5G53970" "AT5G54130" "AT5G54190" "AT5G54470"
## [974] "AT5G54585" "AT5G54610" "AT5G54630" "AT5G54930" "AT5G54960" "AT5G55050" "AT5G55090"
## [981] "AT5G55530" "AT5G55570" "AT5G55730" "AT5G55740" "AT5G55790" "AT5G56580" "AT5G56850"
## [988] "AT5G56860" "AT5G56960" "AT5G57030" "AT5G57110" "AT5G57180" "AT5G57220" "AT5G57240"
## [995] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G58770" "AT5G58870"
## [ reached getOption("max.print") -- omitted 59 entries ]
##
## $`A1-V1_up_down`
## [1] "AT1G02710" "AT1G04620" "AT1G07050" "AT1G10960" "AT1G17665" "AT1G21500" "AT1G55260" "AT1G62170"
## [9] "AT1G62180" "AT1G64500" "AT1G68050" "AT2G21320" "AT2G24762" "AT2G25730" "AT2G40080" "AT2G46830"
## [17] "AT3G07640" "AT3G07650" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [25] "AT4G01130" "AT4G04330" "AT4G12390" "AT4G26670" "AT4G33980" "AT4G37650" "AT5G02150" "AT5G11150"
## [33] "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280" "AT5G39410" "AT5G42900"
## [41] "AT5G47610" "AT5G48250" "AT5G48570" "AT5G54610" "AT5G57110" "AT5G58770" "AT5G59570" "AT5G60100"
## [49] "AT5G61380" "AT5G62140"
##
## $`M6-A6_up_down`
## [1] "AT1G01010" "AT1G01120" "AT1G01340" "AT1G01370" "AT1G01390" "AT1G01430" "AT1G01480"
## [8] "AT1G01560" "AT1G01660" "AT1G01680" "AT1G01690" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450" "AT1G02470" "AT1G02500" "AT1G02520"
## [22] "AT1G02610" "AT1G02620" "AT1G02740" "AT1G02820" "AT1G02850" "AT1G02920" "AT1G02930"
## [29] "AT1G03020" "AT1G03050" "AT1G03130" "AT1G03310" "AT1G03495" "AT1G03600" "AT1G03610"
## [36] "AT1G03630" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04680"
## [43] "AT1G04770" "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05540"
## [50] "AT1G05570" "AT1G05880" "AT1G06040" "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06460"
## [57] "AT1G06620" "AT1G06680" "AT1G07000" "AT1G07050" "AT1G07280" "AT1G07430" "AT1G07440"
## [64] "AT1G07500" "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08380" "AT1G08450" "AT1G08550"
## [71] "AT1G08860" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020"
## [78] "AT1G10040" "AT1G10150" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10657" "AT1G10760"
## [85] "AT1G10960" "AT1G10990" "AT1G11130" "AT1G11180" "AT1G11260" "AT1G11290" "AT1G11330"
## [92] "AT1G11362" "AT1G11380" "AT1G11905" "AT1G11925" "AT1G12090" "AT1G12160" "AT1G12200"
## [99] "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12450" "AT1G12500" "AT1G12710" "AT1G12730"
## [106] "AT1G12900" "AT1G12940" "AT1G13245" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13470"
## [113] "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550" "AT1G13650" "AT1G13700" "AT1G13830"
## [120] "AT1G13930" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14480" "AT1G14540"
## [127] "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G15040" "AT1G15080" "AT1G15150"
## [134] "AT1G15160" "AT1G15290" "AT1G15415" "AT1G15520" "AT1G15550" "AT1G15690" "AT1G15790"
## [141] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16090"
## [148] "AT1G16150" "AT1G16300" "AT1G16400" "AT1G16410" "AT1G16420" "AT1G16670" "AT1G16720"
## [155] "AT1G16730" "AT1G17100" "AT1G17170" "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500"
## [162] "AT1G17600" "AT1G17615" "AT1G17744" "AT1G17745" "AT1G17750" "AT1G17830" "AT1G17850"
## [169] "AT1G17970" "AT1G18000" "AT1G18010" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18570"
## [176] "AT1G18890" "AT1G18910" "AT1G19020" "AT1G19150" "AT1G19250" "AT1G19450" "AT1G19510"
## [183] "AT1G19540" "AT1G19715" "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20310"
## [190] "AT1G20440" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310" "AT1G21370" "AT1G21390"
## [197] "AT1G21500" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22190"
## [204] "AT1G22220" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22400" "AT1G22403"
## [211] "AT1G22480" "AT1G22490" "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590"
## [218] "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23200" "AT1G23205"
## [225] "AT1G23390" "AT1G23400" "AT1G23480" "AT1G23710" "AT1G23740" "AT1G23840" "AT1G23850"
## [232] "AT1G24095" "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G25400"
## [239] "AT1G25450" "AT1G26130" "AT1G26150" "AT1G26230" "AT1G26380" "AT1G26390" "AT1G26410"
## [246] "AT1G26420" "AT1G26761" "AT1G26800" "AT1G27110" "AT1G27480" "AT1G27770" "AT1G27950"
## [253] "AT1G28010" "AT1G28330" "AT1G28370" "AT1G28480" "AT1G29090" "AT1G29195" "AT1G29280"
## [260] "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530"
## [267] "AT1G29600" "AT1G29640" "AT1G29670" "AT1G29680" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30190" "AT1G30270" "AT1G30420" "AT1G30520" "AT1G30620" "AT1G30814" "AT1G30850"
## [281] "AT1G30900" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330" "AT1G31880" "AT1G31920"
## [288] "AT1G32060" "AT1G32080" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950"
## [295] "AT1G32960" "AT1G33030" "AT1G33110" "AT1G33170" "AT1G33240" "AT1G33420" "AT1G33430"
## [302] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33760" "AT1G33800" "AT1G33950" "AT1G33960"
## [309] "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140" "AT1G35210" "AT1G35230" "AT1G35420"
## [316] "AT1G35710" "AT1G35910" "AT1G36370" "AT1G36622" "AT1G36675" "AT1G37130" "AT1G42550"
## [323] "AT1G42980" "AT1G43670" "AT1G43910" "AT1G44000" "AT1G44130" "AT1G44446" "AT1G45010"
## [330] "AT1G45145" "AT1G47210" "AT1G47370" "AT1G47440" "AT1G47510" "AT1G47580" "AT1G47890"
## [337] "AT1G48030" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010"
## [344] "AT1G49050" "AT1G49200" "AT1G49380" "AT1G49490" "AT1G49650" "AT1G49975" "AT1G49990"
## [351] "AT1G50040" "AT1G50290" "AT1G50400" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [358] "AT1G51640" "AT1G51645" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51805" "AT1G51850"
## [365] "AT1G51860" "AT1G51890" "AT1G51920" "AT1G51940" "AT1G52230" "AT1G52315" "AT1G52342"
## [372] "AT1G52540" "AT1G52565" "AT1G52770" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53160"
## [379] "AT1G53620" "AT1G53625" "AT1G54000" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G54960"
## [386] "AT1G55330" "AT1G55370" "AT1G55480" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [393] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G56670"
## [400] "AT1G56720" "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590"
## [407] "AT1G59865" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690" "AT1G60730" "AT1G60800"
## [414] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61300" "AT1G61340"
## [421] "AT1G61370" "AT1G61415" "AT1G61420" "AT1G61520" "AT1G61550" "AT1G61640" "AT1G61795"
## [428] "AT1G61800" "AT1G61810" "AT1G62170" "AT1G62180" "AT1G62320" "AT1G62422" "AT1G62510"
## [435] "AT1G62560" "AT1G62580" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63245" "AT1G63570"
## [442] "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G63930" "AT1G64065" "AT1G64355"
## [449] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900"
## [456] "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65590" "AT1G65690"
## [463] "AT1G65870" "AT1G66090" "AT1G66130" "AT1G66230" "AT1G66250" "AT1G66390" "AT1G66460"
## [470] "AT1G66550" "AT1G66590" "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66840" "AT1G66880"
## [477] "AT1G66930" "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67265" "AT1G67360"
## [484] "AT1G67520" "AT1G67590" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67740" "AT1G67800"
## [491] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67910" "AT1G67920" "AT1G67980" "AT1G68010"
## [498] "AT1G68050" "AT1G68110" "AT1G68190" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68520"
## [505] "AT1G68540" "AT1G68620" "AT1G68670" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G68830"
## [512] "AT1G68890" "AT1G69140" "AT1G69260" "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790"
## [519] "AT1G69840" "AT1G69890" "AT1G69930" "AT1G70090" "AT1G70140" "AT1G70170" "AT1G70290"
## [526] "AT1G70580" "AT1G70690" "AT1G70820" "AT1G70990" "AT1G71000" "AT1G71030" "AT1G71390"
## [533] "AT1G71690" "AT1G72000" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72220" "AT1G72240"
## [540] "AT1G72270" "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72540" "AT1G72600" "AT1G72610"
## [547] "AT1G72630" "AT1G72640" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770"
## [554] "AT1G72870" "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010"
## [561] "AT1G73130" "AT1G73325" "AT1G73330" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750"
## [568] "AT1G73805" "AT1G73810" "AT1G73870" "AT1G73890" "AT1G73965" "AT1G74070" "AT1G74080"
## [575] "AT1G74100" "AT1G74200" "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750"
## [582] "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75040" "AT1G75060" "AT1G75170" "AT1G75250"
## [589] "AT1G75460" "AT1G75690" "AT1G75770" "AT1G75830" "AT1G75900" "AT1G75960" "AT1G76040"
## [596] "AT1G76080" "AT1G76100" "AT1G76110" "AT1G76620" "AT1G76690" "AT1G76760" "AT1G76955"
## [603] "AT1G76970" "AT1G76980" "AT1G77090" "AT1G77210" "AT1G77500" "AT1G77630" "AT1G77640"
## [610] "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78000" "AT1G78100" "AT1G78190"
## [617] "AT1G78380" "AT1G78410" "AT1G78450" "AT1G78600" "AT1G78780" "AT1G78990" "AT1G78995"
## [624] "AT1G79330" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79770" "AT1G79780" "AT1G80110"
## [631] "AT1G80280" "AT1G80300" "AT1G80440" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80630"
## [638] "AT1G80830" "AT1G80840" "AT1G80920" "AT2G01180" "AT2G01300" "AT2G01590" "AT2G01755"
## [645] "AT2G01760" "AT2G01818" "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070"
## [652] "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02710" "AT2G02930" "AT2G02950" "AT2G02990"
## [659] "AT2G03090" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03505" "AT2G03550" "AT2G03710"
## [666] "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495"
## [673] "AT2G04515" "AT2G04790" "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940"
## [680] "AT2G05995" "AT2G06520" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13360" "AT2G13790"
## [687] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G15020" "AT2G15090"
## [694] "AT2G15890" "AT2G15970" "AT2G16060" "AT2G16365" "AT2G16630" "AT2G16660" "AT2G16720"
## [701] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17230" "AT2G17440"
## [708] "AT2G17500" "AT2G17695" "AT2G17720" "AT2G17780" "AT2G18000" "AT2G18160" "AT2G18162"
## [715] "AT2G18193" "AT2G18300" "AT2G18560" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G18700"
## [722] "AT2G18940" "AT2G19190" "AT2G19310" "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20250"
## [729] "AT2G20562" "AT2G20670" "AT2G20680" "AT2G21130" "AT2G21140" "AT2G21188" "AT2G21320"
## [736] "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790"
## [743] "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22200" "AT2G22470" "AT2G22810" "AT2G22830"
## [750] "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600" "AT2G23680"
## [757] "AT2G23810" "AT2G23840" "AT2G24110" "AT2G24285" "AT2G24490" "AT2G24550" "AT2G24580"
## [764] "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25190" "AT2G25200" "AT2G25240" "AT2G25260"
## [771] "AT2G25270" "AT2G25440" "AT2G25450" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G25900"
## [778] "AT2G26080" "AT2G26170" "AT2G26300" "AT2G26390" "AT2G26400" "AT2G26480" "AT2G26710"
## [785] "AT2G26870" "AT2G26975" "AT2G27420" "AT2G28120" "AT2G28160" "AT2G28210" "AT2G28305"
## [792] "AT2G28400" "AT2G28570" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29100" "AT2G29170"
## [799] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29400"
## [806] "AT2G29450" "AT2G29460" "AT2G29630" "AT2G29650" "AT2G29670" "AT2G29720" "AT2G29750"
## [813] "AT2G29990" "AT2G30070" "AT2G30080" "AT2G30150" "AT2G30390" "AT2G30395" "AT2G30400"
## [820] "AT2G30420" "AT2G30550" "AT2G30600" "AT2G30615" "AT2G30750" "AT2G30770" "AT2G30930"
## [827] "AT2G31018" "AT2G31020" "AT2G31270" "AT2G31360" "AT2G31585" "AT2G31790" "AT2G31865"
## [834] "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [841] "AT2G32179" "AT2G32180" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32290" "AT2G32430"
## [848] "AT2G32460" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32590"
## [855] "AT2G32640" "AT2G32960" "AT2G33060" "AT2G33110" "AT2G33255" "AT2G33330" "AT2G33580"
## [862] "AT2G33735" "AT2G33855" "AT2G34070" "AT2G34410" "AT2G34420" "AT2G34500" "AT2G34510"
## [869] "AT2G34580" "AT2G34600" "AT2G34610" "AT2G34620" "AT2G34650" "AT2G34760" "AT2G34940"
## [876] "AT2G35130" "AT2G35260" "AT2G35660" "AT2G35710" "AT2G35760" "AT2G35960" "AT2G35980"
## [883] "AT2G36026" "AT2G36050" "AT2G36270" "AT2G36580" "AT2G36670" "AT2G36690" "AT2G36830"
## [890] "AT2G36990" "AT2G37070" "AT2G37100" "AT2G37220" "AT2G37260" "AT2G37440" "AT2G37450"
## [897] "AT2G37530" "AT2G37540" "AT2G37560" "AT2G37585" "AT2G37710" "AT2G37750" "AT2G37790"
## [904] "AT2G37890" "AT2G37950" "AT2G37980" "AT2G38210" "AT2G38230" "AT2G38290" "AT2G38340"
## [911] "AT2G38460" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38540" "AT2G38690" "AT2G38790"
## [918] "AT2G38820" "AT2G38860" "AT2G39110" "AT2G39220" "AT2G39230" "AT2G39320" "AT2G39350"
## [925] "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650" "AT2G39730" "AT2G39880" "AT2G39920"
## [932] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40095" "AT2G40140" "AT2G40150" "AT2G40330"
## [939] "AT2G40540" "AT2G40670" "AT2G40740" "AT2G40840" "AT2G40960" "AT2G41010" "AT2G41050"
## [946] "AT2G41100" "AT2G41342" "AT2G41380" "AT2G41410" "AT2G41430" "AT2G41480" "AT2G41660"
## [953] "AT2G41835" "AT2G41880" "AT2G41990" "AT2G42060" "AT2G42320" "AT2G42350" "AT2G42380"
## [960] "AT2G42485" "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43010" "AT2G43050"
## [967] "AT2G43100" "AT2G43120" "AT2G43140" "AT2G43290" "AT2G43320" "AT2G43550" "AT2G43570"
## [974] "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290" "AT2G44578" "AT2G44600"
## [981] "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45180" "AT2G45220" "AT2G45400" "AT2G45560"
## [988] "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430"
## [995] "AT2G46450" "AT2G46620" "AT2G46680" "AT2G46790" "AT2G47000" "AT2G47130"
## [ reached getOption("max.print") -- omitted 1373 entries ]
##
## $`M6-V6_up_down`
## [1] "AT1G01010" "AT1G01190" "AT1G01390" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520"
## [8] "AT1G02610" "AT1G02660" "AT1G03010" "AT1G03130" "AT1G03200" "AT1G03600" "AT1G03630"
## [15] "AT1G03680" "AT1G03990" "AT1G04250" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G04770"
## [22] "AT1G05100" "AT1G05675" "AT1G05840" "AT1G06040" "AT1G06460" "AT1G06620" "AT1G06680"
## [29] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G07500" "AT1G07570" "AT1G08050" "AT1G08380"
## [36] "AT1G09310" "AT1G09340" "AT1G09350" "AT1G09930" "AT1G09932" "AT1G10020" "AT1G10150"
## [43] "AT1G10586" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11400" "AT1G12090" "AT1G12160"
## [50] "AT1G12380" "AT1G12540" "AT1G12710" "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13150"
## [57] "AT1G13245" "AT1G13260" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650" "AT1G13830"
## [64] "AT1G13930" "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700"
## [71] "AT1G14740" "AT1G15350" "AT1G15810" "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980"
## [78] "AT1G15990" "AT1G17147" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G17970" "AT1G18000"
## [85] "AT1G18010" "AT1G18020" "AT1G18200" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [92] "AT1G19150" "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680"
## [99] "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20310" "AT1G20340" "AT1G20460" "AT1G21130"
## [106] "AT1G21240" "AT1G21500" "AT1G21550" "AT1G21740" "AT1G21910" "AT1G22180" "AT1G22220"
## [113] "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770" "AT1G23060" "AT1G23390"
## [120] "AT1G23740" "AT1G23850" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26730"
## [127] "AT1G26770" "AT1G26800" "AT1G26930" "AT1G27330" "AT1G27480" "AT1G28130" "AT1G28370"
## [134] "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29640" "AT1G29670"
## [141] "AT1G29910" "AT1G29920" "AT1G30100" "AT1G30160" "AT1G30380" "AT1G30850" "AT1G31120"
## [148] "AT1G31330" "AT1G31690" "AT1G31770" "AT1G31900" "AT1G32060" "AT1G32080" "AT1G32220"
## [155] "AT1G32870" "AT1G33110" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G33950" "AT1G33960"
## [162] "AT1G34180" "AT1G34420" "AT1G35140" "AT1G36370" "AT1G37130" "AT1G43160" "AT1G43245"
## [169] "AT1G43310" "AT1G43670" "AT1G43910" "AT1G44130" "AT1G44446" "AT1G44575" "AT1G47510"
## [176] "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605" "AT1G49200" "AT1G49520" "AT1G49530"
## [183] "AT1G50590" "AT1G51080" "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51760"
## [190] "AT1G51780" "AT1G51805" "AT1G51860" "AT1G52030" "AT1G52200" "AT1G52220" "AT1G52230"
## [197] "AT1G52342" "AT1G52510" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53163" "AT1G53830"
## [204] "AT1G54010" "AT1G54030" "AT1G54095" "AT1G54410" "AT1G54780" "AT1G54790" "AT1G54820"
## [211] "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55610" "AT1G55670" "AT1G56300" "AT1G56340"
## [218] "AT1G57560" "AT1G57590" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G58030" "AT1G59640"
## [225] "AT1G59860" "AT1G60190" "AT1G60730" "AT1G60800" "AT1G61110" "AT1G61120" "AT1G61190"
## [232] "AT1G61215" "AT1G61260" "AT1G61300" "AT1G61340" "AT1G61520" "AT1G61550" "AT1G62520"
## [239] "AT1G63840" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G65481" "AT1G65690"
## [246] "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66130" "AT1G66230" "AT1G66280" "AT1G66350"
## [253] "AT1G66910" "AT1G66930" "AT1G66960" "AT1G67340" "AT1G67420" "AT1G67590" "AT1G67635"
## [260] "AT1G67740" "AT1G67820" "AT1G67910" "AT1G68050" "AT1G68110" "AT1G68840" "AT1G69140"
## [267] "AT1G69260" "AT1G69360" "AT1G69480" "AT1G69530" "AT1G69570" "AT1G69572" "AT1G69830"
## [274] "AT1G69890" "AT1G70090" "AT1G70420" "AT1G70580" "AT1G70690" "AT1G70790" "AT1G70820"
## [281] "AT1G71000" "AT1G71030" "AT1G71110" "AT1G71390" "AT1G71970" "AT1G72210" "AT1G72410"
## [288] "AT1G72416" "AT1G72430" "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645"
## [295] "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G73470" "AT1G73480" "AT1G73600"
## [302] "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74100" "AT1G74430" "AT1G74710"
## [309] "AT1G74730" "AT1G74940" "AT1G75280" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G75690"
## [316] "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76620" "AT1G76640" "AT1G76690"
## [323] "AT1G76980" "AT1G77210" "AT1G77280" "AT1G77760" "AT1G78000" "AT1G78290" "AT1G78600"
## [330] "AT1G78780" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79270" "AT1G79310" "AT1G79330"
## [337] "AT1G80110" "AT1G80280" "AT1G80440" "AT1G80590" "AT1G80840" "AT1G80920" "AT2G01008"
## [344] "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755" "AT2G01830" "AT2G01870" "AT2G01890"
## [351] "AT2G01918" "AT2G02070" "AT2G02340" "AT2G02450" "AT2G03310" "AT2G03410" "AT2G03420"
## [358] "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G04790"
## [365] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05940" "AT2G06255" "AT2G06520"
## [372] "AT2G13360" "AT2G14610" "AT2G14620" "AT2G15090" "AT2G15760" "AT2G15890" "AT2G15970"
## [379] "AT2G16270" "AT2G16365" "AT2G16650" "AT2G16720" "AT2G17230" "AT2G17500" "AT2G17880"
## [386] "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18350" "AT2G18560" "AT2G18660" "AT2G18700"
## [393] "AT2G19310" "AT2G20110" "AT2G20142" "AT2G21130" "AT2G21188" "AT2G21320" "AT2G21330"
## [400] "AT2G21970" "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G22810" "AT2G22830"
## [407] "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240" "AT2G24550" "AT2G24580" "AT2G24645"
## [414] "AT2G25200" "AT2G25690" "AT2G25735" "AT2G25900" "AT2G26150" "AT2G26300" "AT2G26390"
## [421] "AT2G26400" "AT2G26480" "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27228" "AT2G27230"
## [428] "AT2G27300" "AT2G27385" "AT2G27420" "AT2G28110" "AT2G28120" "AT2G28450" "AT2G28570"
## [435] "AT2G28605" "AT2G28900" "AT2G29100" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310"
## [442] "AT2G29360" "AT2G29630" "AT2G29650" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30150"
## [449] "AT2G30420" "AT2G30540" "AT2G30570" "AT2G30615" "AT2G30770" "AT2G30820" "AT2G30830"
## [456] "AT2G31040" "AT2G31180" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32460"
## [463] "AT2G32500" "AT2G32640" "AT2G32930" "AT2G33830" "AT2G34010" "AT2G34070" "AT2G34080"
## [470] "AT2G34410" "AT2G34420" "AT2G34430" "AT2G34620" "AT2G35660" "AT2G35940" "AT2G35945"
## [477] "AT2G35950" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G36640" "AT2G37070" "AT2G37440"
## [484] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37750" "AT2G37950" "AT2G38240" "AT2G38250"
## [491] "AT2G38400" "AT2G38480" "AT2G38490" "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300"
## [498] "AT2G39400" "AT2G39435" "AT2G39730" "AT2G39800" "AT2G39900" "AT2G39980" "AT2G40000"
## [505] "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40200" "AT2G40330" "AT2G40340" "AT2G40460"
## [512] "AT2G40550" "AT2G40610" "AT2G40670" "AT2G40840" "AT2G40960" "AT2G41070" "AT2G41430"
## [519] "AT2G42060" "AT2G42485" "AT2G42530" "AT2G42540" "AT2G42760" "AT2G42890" "AT2G43000"
## [526] "AT2G43010" "AT2G43120" "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680"
## [533] "AT2G44130" "AT2G44490" "AT2G44578" "AT2G44600" "AT2G44840" "AT2G44940" "AT2G45180"
## [540] "AT2G45245" "AT2G45560" "AT2G45760" "AT2G45850" "AT2G45920" "AT2G46040" "AT2G46240"
## [547] "AT2G46400" "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46790" "AT2G46820"
## [554] "AT2G46830" "AT2G46900" "AT2G46970" "AT2G47000" "AT2G47420" "AT2G47770" "AT2G47820"
## [561] "AT2G47920" "AT2G47950" "AT3G01060" "AT3G01440" "AT3G01500" "AT3G01770" "AT3G01810"
## [568] "AT3G02210" "AT3G02550" "AT3G02730" "AT3G02885" "AT3G02990" "AT3G03310" "AT3G03440"
## [575] "AT3G04000" "AT3G04210" "AT3G04300" "AT3G04380" "AT3G04420" "AT3G05500" "AT3G06020"
## [582] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G06490" "AT3G06890" "AT3G07200" "AT3G07310"
## [589] "AT3G07320" "AT3G07350" "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440"
## [596] "AT3G09580" "AT3G09600" "AT3G09960" "AT3G10020" "AT3G10060" "AT3G10520" "AT3G10720"
## [603] "AT3G10815" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G11210" "AT3G11450" "AT3G11480"
## [610] "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13437" "AT3G13470"
## [617] "AT3G13610" "AT3G13730" "AT3G14200" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870"
## [624] "AT3G15536" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G15950" "AT3G16130" "AT3G16250"
## [631] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17390" "AT3G17420"
## [638] "AT3G17510" "AT3G17640" "AT3G17690" "AT3G17840" "AT3G17860" "AT3G18050" "AT3G18080"
## [645] "AT3G18500" "AT3G18710" "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19100"
## [652] "AT3G19615" "AT3G19680" "AT3G19690" "AT3G19970" "AT3G20250" "AT3G21055" "AT3G21080"
## [659] "AT3G21320" "AT3G21500" "AT3G21670" "AT3G21700" "AT3G21780" "AT3G21950" "AT3G22160"
## [666] "AT3G22210" "AT3G22275" "AT3G22290" "AT3G23880" "AT3G24430" "AT3G24515" "AT3G24518"
## [673] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25670" "AT3G25890" "AT3G26180"
## [680] "AT3G26290" "AT3G26440" "AT3G26470" "AT3G26510" "AT3G26740" "AT3G27170" "AT3G27415"
## [687] "AT3G27416" "AT3G27690" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510" "AT3G28580"
## [694] "AT3G29320" "AT3G29330" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G45970" "AT3G46370"
## [701] "AT3G46630" "AT3G46640" "AT3G46658" "AT3G46660" "AT3G46780" "AT3G46970" "AT3G47070"
## [708] "AT3G47420" "AT3G47460" "AT3G47470" "AT3G47480" "AT3G47500" "AT3G47730" "AT3G48090"
## [715] "AT3G48100" "AT3G48115" "AT3G48200" "AT3G48280" "AT3G48420" "AT3G48520" "AT3G48580"
## [722] "AT3G48630" "AT3G48700" "AT3G48720" "AT3G48780" "AT3G49570" "AT3G49580" "AT3G49790"
## [729] "AT3G50060" "AT3G50770" "AT3G50820" "AT3G50840" "AT3G50920" "AT3G50930" "AT3G50960"
## [736] "AT3G51080" "AT3G51090" "AT3G51400" "AT3G51470" "AT3G51670" "AT3G51750" "AT3G51860"
## [743] "AT3G52070" "AT3G52072" "AT3G52180" "AT3G52430" "AT3G52960" "AT3G53210" "AT3G53470"
## [750] "AT3G53800" "AT3G53830" "AT3G54320" "AT3G54366" "AT3G54490" "AT3G54500" "AT3G54890"
## [757] "AT3G55060" "AT3G55240" "AT3G55500" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [764] "AT3G55970" "AT3G56160" "AT3G56170" "AT3G56260" "AT3G56290" "AT3G56940" "AT3G57260"
## [771] "AT3G57380" "AT3G57460" "AT3G57740" "AT3G57950" "AT3G59060" "AT3G59750" "AT3G59870"
## [778] "AT3G59900" "AT3G59930" "AT3G59940" "AT3G60390" "AT3G60420" "AT3G60470" "AT3G60490"
## [785] "AT3G60961" "AT3G60966" "AT3G61060" "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430"
## [792] "AT3G61450" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870" "AT3G61890" "AT3G61930"
## [799] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63010" "AT3G63140" "AT3G63160" "AT3G63380"
## [806] "AT4G00165" "AT4G00700" "AT4G00970" "AT4G01330" "AT4G01430" "AT4G01535" "AT4G01540"
## [813] "AT4G01670" "AT4G02075" "AT4G02360" "AT4G02380" "AT4G02760" "AT4G02770" "AT4G03400"
## [820] "AT4G03460" "AT4G03510" "AT4G04020" "AT4G04223" "AT4G04330" "AT4G04340" "AT4G04490"
## [827] "AT4G04500" "AT4G04510" "AT4G04810" "AT4G04830" "AT4G05010" "AT4G05020" "AT4G05070"
## [834] "AT4G05100" "AT4G05180" "AT4G06534" "AT4G06744" "AT4G08950" "AT4G09010" "AT4G09650"
## [841] "AT4G09750" "AT4G09760" "AT4G09770" "AT4G10120" "AT4G10340" "AT4G10390" "AT4G10500"
## [848] "AT4G11240" "AT4G11300" "AT4G11350" "AT4G11360" "AT4G11521" "AT4G11990" "AT4G12320"
## [855] "AT4G12330" "AT4G12390" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [862] "AT4G12800" "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810"
## [869] "AT4G14270" "AT4G14560" "AT4G14630" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248"
## [876] "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G15975" "AT4G16146" "AT4G16260"
## [883] "AT4G16350" "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17660"
## [890] "AT4G17670" "AT4G17730" "AT4G17810" "AT4G18205" "AT4G18220" "AT4G19170" "AT4G19530"
## [897] "AT4G20320" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445" "AT4G21680" "AT4G21790"
## [904] "AT4G21870" "AT4G21990" "AT4G22070" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23150"
## [911] "AT4G23180" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G23800" "AT4G23810" "AT4G24240"
## [918] "AT4G25290" "AT4G25390" "AT4G25433" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26080"
## [925] "AT4G26120" "AT4G26470" "AT4G26520" "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440"
## [932] "AT4G27590" "AT4G27700" "AT4G27860" "AT4G27870" "AT4G28240" "AT4G28270" "AT4G28703"
## [939] "AT4G28750" "AT4G29190" "AT4G29380" "AT4G29740" "AT4G29930" "AT4G30180" "AT4G30650"
## [946] "AT4G30662" "AT4G32280" "AT4G32340" "AT4G32590" "AT4G32920" "AT4G32980" "AT4G33010"
## [953] "AT4G33150" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34200" "AT4G34220"
## [960] "AT4G34250" "AT4G34630" "AT4G34650" "AT4G34900" "AT4G35600" "AT4G35655" "AT4G35720"
## [967] "AT4G36010" "AT4G36040" "AT4G36430" "AT4G36530" "AT4G36640" "AT4G36780" "AT4G36950"
## [974] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37850" "AT4G37900" "AT4G37925"
## [981] "AT4G38550" "AT4G38552" "AT4G38560" "AT4G38770" "AT4G39030" "AT4G39190" "AT4G39260"
## [988] "AT4G39580" "AT4G39710" "AT4G39730" "AT4G39950" "AT5G01015" "AT5G01520" "AT5G01530"
## [995] "AT5G01840" "AT5G01850" "AT5G02100" "AT5G02160" "AT5G02170" "AT5G02180"
## [ reached getOption("max.print") -- omitted 311 entries ]
##
## $`A6-V6_up_down`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03020" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04240"
## [15] "AT1G04490" "AT1G05010" "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148"
## [22] "AT1G06360" "AT1G08050" "AT1G08860" "AT1G09950" "AT1G10230" "AT1G11310" "AT1G11330"
## [29] "AT1G11905" "AT1G12210" "AT1G12240" "AT1G12540" "AT1G13110" "AT1G13310" "AT1G13550"
## [36] "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G16370" "AT1G16400" "AT1G16410"
## [43] "AT1G17147" "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19650"
## [50] "AT1G19670" "AT1G19960" "AT1G21250" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400"
## [57] "AT1G22770" "AT1G23200" "AT1G25370" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27100" "AT1G28010" "AT1G29280" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420"
## [71] "AT1G31280" "AT1G31290" "AT1G31690" "AT1G31770" "AT1G32920" "AT1G32940" "AT1G32960"
## [78] "AT1G33800" "AT1G34210" "AT1G35210" "AT1G35230" "AT1G43310" "AT1G43910" "AT1G44900"
## [85] "AT1G49520" "AT1G49530" "AT1G51660" "AT1G51780" "AT1G52200" "AT1G53620" "AT1G53625"
## [92] "AT1G54095" "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990"
## [99] "AT1G59865" "AT1G61140" "AT1G61370" "AT1G63040" "AT1G63570" "AT1G63750" "AT1G63820"
## [106] "AT1G64710" "AT1G65590" "AT1G66280" "AT1G66550" "AT1G66600" "AT1G67635" "AT1G67800"
## [113] "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G69370" "AT1G69480" "AT1G70420"
## [120] "AT1G70690" "AT1G71100" "AT1G72140" "AT1G72180" "AT1G72450" "AT1G72930" "AT1G73210"
## [127] "AT1G73805" "AT1G74430" "AT1G74710" "AT1G74950" "AT1G75540" "AT1G75830" "AT1G76970"
## [134] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G01830" "AT2G02930" "AT2G02990" "AT2G03980"
## [141] "AT2G04040" "AT2G04070" "AT2G04430" "AT2G04450" "AT2G05070" "AT2G06255" "AT2G07687"
## [148] "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480" "AT2G16440" "AT2G18660" "AT2G20110"
## [155] "AT2G21510" "AT2G21790" "AT2G22200" "AT2G22770" "AT2G22930" "AT2G23760" "AT2G23810"
## [162] "AT2G24160" "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25130" "AT2G25737" "AT2G26150"
## [169] "AT2G26240" "AT2G26440" "AT2G26560" "AT2G27228" "AT2G27230" "AT2G28210" "AT2G28570"
## [176] "AT2G28890" "AT2G29720" "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31018" "AT2G31020"
## [183] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34010" "AT2G34070" "AT2G34500" "AT2G35950"
## [190] "AT2G36350" "AT2G36380" "AT2G36470" "AT2G36815" "AT2G36830" "AT2G37180" "AT2G37560"
## [197] "AT2G37940" "AT2G37980" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G38790" "AT2G39110"
## [204] "AT2G39250" "AT2G39800" "AT2G40340" "AT2G40460" "AT2G40550" "AT2G41380" "AT2G41835"
## [211] "AT2G42760" "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130"
## [218] "AT2G47140" "AT2G47600" "AT2G47730" "AT2G47950" "AT3G01180" "AT3G01290" "AT3G02840"
## [225] "AT3G02990" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G06020" "AT3G07195" "AT3G07720"
## [232] "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11470" "AT3G11480" "AT3G11840"
## [239] "AT3G13080" "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G14870" "AT3G15356"
## [246] "AT3G15720" "AT3G16460" "AT3G16510" "AT3G17510" "AT3G17860" "AT3G19010" "AT3G19100"
## [253] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21670" "AT3G21780" "AT3G22370" "AT3G22910"
## [260] "AT3G23530" "AT3G23910" "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600"
## [267] "AT3G26830" "AT3G27170" "AT3G27960" "AT3G28580" "AT3G28930" "AT3G29240" "AT3G29400"
## [274] "AT3G41768" "AT3G43270" "AT3G44350" "AT3G44830" "AT3G45260" "AT3G46520" "AT3G46940"
## [281] "AT3G47540" "AT3G47750" "AT3G47820" "AT3G48090" "AT3G48350" "AT3G48520" "AT3G48640"
## [288] "AT3G48850" "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150"
## [295] "AT3G54820" "AT3G55290" "AT3G55470" "AT3G55500" "AT3G55970" "AT3G56260" "AT3G56710"
## [302] "AT3G56870" "AT3G56891" "AT3G57700" "AT3G57780" "AT3G59710" "AT3G60190" "AT3G60420"
## [309] "AT3G60450" "AT3G60966" "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61760" "AT3G61890"
## [316] "AT3G62700" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895" "AT4G01950" "AT4G02380"
## [323] "AT4G02420" "AT4G02550" "AT4G03060" "AT4G03400" "AT4G05030" "AT4G09300" "AT4G09570"
## [330] "AT4G10060" "AT4G10390" "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G12030"
## [337] "AT4G13180" "AT4G14220" "AT4G14368" "AT4G14610" "AT4G15070" "AT4G15430" "AT4G16740"
## [344] "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660" "AT4G21380" "AT4G21840"
## [351] "AT4G21903" "AT4G22200" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010" "AT4G23170"
## [358] "AT4G23180" "AT4G23250" "AT4G23420" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25433"
## [365] "AT4G25780" "AT4G25900" "AT4G27745" "AT4G27870" "AT4G28390" "AT4G29440" "AT4G30280"
## [372] "AT4G30640" "AT4G32780" "AT4G33925" "AT4G33930" "AT4G34135" "AT4G34390" "AT4G35180"
## [379] "AT4G36010" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370" "AT4G37390" "AT4G37850"
## [386] "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640" "AT5G01840"
## [393] "AT5G01980" "AT5G02260" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650"
## [400] "AT5G07690" "AT5G08335" "AT5G08790" "AT5G10390" "AT5G10440" "AT5G11160" "AT5G12930"
## [407] "AT5G12940" "AT5G13190" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G14760" "AT5G15190"
## [414] "AT5G17380" "AT5G17490" "AT5G17780" "AT5G18470" "AT5G19110" "AT5G20400" "AT5G20960"
## [421] "AT5G21280" "AT5G22060" "AT5G22300" "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205"
## [428] "AT5G24206" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G24910" "AT5G25250" "AT5G25930"
## [435] "AT5G26260" "AT5G26270" "AT5G27350" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990"
## [442] "AT5G39020" "AT5G39040" "AT5G39680" "AT5G41120" "AT5G41180" "AT5G41730" "AT5G41880"
## [449] "AT5G42380" "AT5G42440" "AT5G42650" "AT5G43910" "AT5G44070" "AT5G44350" "AT5G44635"
## [456] "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830" "AT5G52020" "AT5G52120"
## [463] "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52882" "AT5G52910" "AT5G53290"
## [470] "AT5G54300" "AT5G54470" "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860"
## [477] "AT5G55450" "AT5G56960" "AT5G57340" "AT5G57800" "AT5G59720" "AT5G60280" "AT5G60890"
## [484] "AT5G60900" "AT5G61890" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62470" "AT5G62770"
## [491] "AT5G62920" "AT5G63450" "AT5G64170" "AT5G64750" "AT5G64810" "AT5G64870" "AT5G65280"
## [498] "AT5G66052" "AT5G66640" "AT5G66890" "AT5G67150" "AT5G67160" "AT5G67340" "ATCG00020"
## [505] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [512] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [519] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [526] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [533] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $`M12-A12_up_down`
## [1] "AT1G01010" "AT1G01070" "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01340"
## [8] "AT1G01370" "AT1G01430" "AT1G01480" "AT1G01520" "AT1G01560" "AT1G01590" "AT1G01610"
## [15] "AT1G01620" "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390"
## [22] "AT1G02405" "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02640" "AT1G02650" "AT1G02660"
## [29] "AT1G02700" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03180" "AT1G03210" "AT1G03290"
## [36] "AT1G03300" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03600" "AT1G03630" "AT1G03660"
## [43] "AT1G03680" "AT1G03850" "AT1G03870" "AT1G03990" "AT1G04040" "AT1G04160" "AT1G04310"
## [50] "AT1G04360" "AT1G04420" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [57] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05310" "AT1G05340" "AT1G05420" "AT1G05570"
## [64] "AT1G05680" "AT1G05835" "AT1G05880" "AT1G06160" "AT1G06180" "AT1G06240" "AT1G06250"
## [71] "AT1G06260" "AT1G06265" "AT1G06460" "AT1G06620" "AT1G06660" "AT1G06680" "AT1G06850"
## [78] "AT1G07000" "AT1G07020" "AT1G07110" "AT1G07320" "AT1G07430" "AT1G07440" "AT1G07476"
## [85] "AT1G07485" "AT1G07490" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620"
## [92] "AT1G07630" "AT1G07880" "AT1G08050" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08630"
## [99] "AT1G08810" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240" "AT1G09340"
## [106] "AT1G09350" "AT1G09440" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09750" "AT1G09794"
## [113] "AT1G09930" "AT1G09932" "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10380" "AT1G10410"
## [120] "AT1G10417" "AT1G10520" "AT1G10585" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10910"
## [127] "AT1G10960" "AT1G11000" "AT1G11100" "AT1G11130" "AT1G11330" "AT1G11362" "AT1G11400"
## [134] "AT1G11480" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11785" "AT1G11860" "AT1G11905"
## [141] "AT1G11925" "AT1G12060" "AT1G12090" "AT1G12250" "AT1G12320" "AT1G12500" "AT1G12540"
## [148] "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150" "AT1G13250" "AT1G13310" "AT1G13330"
## [155] "AT1G13340" "AT1G13380" "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550"
## [162] "AT1G13650" "AT1G13790" "AT1G13990" "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14180"
## [169] "AT1G14185" "AT1G14260" "AT1G14270" "AT1G14330" "AT1G14345" "AT1G14440" "AT1G14540"
## [176] "AT1G14687" "AT1G14700" "AT1G14720" "AT1G14870" "AT1G14880" "AT1G14900" "AT1G15000"
## [183] "AT1G15010" "AT1G15040" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180" "AT1G15260"
## [190] "AT1G15290" "AT1G15380" "AT1G15405" "AT1G15415" "AT1G15510" "AT1G15520" "AT1G15550"
## [197] "AT1G15670" "AT1G15690" "AT1G15790" "AT1G15800" "AT1G15820" "AT1G15980" "AT1G15990"
## [204] "AT1G16080" "AT1G16150" "AT1G16300" "AT1G16410" "AT1G16420" "AT1G16500" "AT1G16670"
## [211] "AT1G16720" "AT1G17020" "AT1G17100" "AT1G17200" "AT1G17380" "AT1G17490" "AT1G17500"
## [218] "AT1G17600" "AT1G17615" "AT1G17650" "AT1G17745" "AT1G17750" "AT1G17850" "AT1G18000"
## [225] "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18570" "AT1G18620" "AT1G18650"
## [232] "AT1G18735" "AT1G18890" "AT1G19020" "AT1G19150" "AT1G19160" "AT1G19180" "AT1G19200"
## [239] "AT1G19220" "AT1G19230" "AT1G19250" "AT1G19270" "AT1G19350" "AT1G19450" "AT1G19490"
## [246] "AT1G19640" "AT1G20010" "AT1G20020" "AT1G20190" "AT1G20310" "AT1G20340" "AT1G20470"
## [253] "AT1G20740" "AT1G20780" "AT1G20823" "AT1G21000" "AT1G21100" "AT1G21200" "AT1G21210"
## [260] "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21500" "AT1G21520"
## [267] "AT1G21525" "AT1G21680" "AT1G21740" "AT1G21880" "AT1G21910" "AT1G21930" "AT1G22180"
## [274] "AT1G22220" "AT1G22280" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22403" "AT1G22410"
## [281] "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22550" "AT1G22590" "AT1G22840" "AT1G22850"
## [288] "AT1G22985" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23120" "AT1G23200"
## [295] "AT1G23205" "AT1G23340" "AT1G23470" "AT1G23480" "AT1G23530" "AT1G23550" "AT1G23560"
## [302] "AT1G23740" "AT1G23840" "AT1G23850" "AT1G23935" "AT1G23940" "AT1G24140" "AT1G24145"
## [309] "AT1G24147" "AT1G24150" "AT1G24577" "AT1G25240" "AT1G25400" "AT1G25450" "AT1G26130"
## [316] "AT1G26150" "AT1G26200" "AT1G26230" "AT1G26250" "AT1G26290" "AT1G26330" "AT1G26380"
## [323] "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26761" "AT1G26762" "AT1G26810" "AT1G26930"
## [330] "AT1G27020" "AT1G27110" "AT1G27210" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [337] "AT1G27980" "AT1G28190" "AT1G28330" "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29090"
## [344] "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460"
## [351] "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29670" "AT1G29680"
## [358] "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980" "AT1G30020" "AT1G30040"
## [365] "AT1G30135" "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30360" "AT1G30380" "AT1G30473"
## [372] "AT1G30520" "AT1G30620" "AT1G30700" "AT1G30755" "AT1G30760" "AT1G30814" "AT1G30840"
## [379] "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31173" "AT1G31290" "AT1G31330"
## [386] "AT1G31540" "AT1G31550" "AT1G31710" "AT1G31835" "AT1G31900" "AT1G31950" "AT1G32060"
## [393] "AT1G32080" "AT1G32200" "AT1G32210" "AT1G32220" "AT1G32350" "AT1G32470" "AT1G32540"
## [400] "AT1G32550" "AT1G32560" "AT1G32760" "AT1G32860" "AT1G32870" "AT1G32910" "AT1G32920"
## [407] "AT1G32940" "AT1G32950" "AT1G32960" "AT1G32990" "AT1G33030" "AT1G33240" "AT1G33420"
## [414] "AT1G33430" "AT1G33440" "AT1G33560" "AT1G33600" "AT1G33720" "AT1G33730" "AT1G33770"
## [421] "AT1G33811" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35140"
## [428] "AT1G35210" "AT1G35230" "AT1G35420" "AT1G35580" "AT1G35680" "AT1G35710" "AT1G35910"
## [435] "AT1G36622" "AT1G36675" "AT1G42970" "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910"
## [442] "AT1G44130" "AT1G44575" "AT1G45145" "AT1G45163" "AT1G45165" "AT1G45545" "AT1G46480"
## [449] "AT1G47056" "AT1G47440" "AT1G47510" "AT1G47670" "AT1G48000" "AT1G48030" "AT1G48315"
## [456] "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49010" "AT1G49050" "AT1G49200"
## [463] "AT1G49230" "AT1G49320" "AT1G49380" "AT1G49450" "AT1G49650" "AT1G49730" "AT1G49900"
## [470] "AT1G50420" "AT1G50450" "AT1G50560" "AT1G50732" "AT1G50740" "AT1G50900" "AT1G50910"
## [477] "AT1G51080" "AT1G51110" "AT1G51130" "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780"
## [484] "AT1G51790" "AT1G51800" "AT1G51860" "AT1G51890" "AT1G51940" "AT1G52000" "AT1G52190"
## [491] "AT1G52200" "AT1G52230" "AT1G52240" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690"
## [498] "AT1G52855" "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53230" "AT1G53233" "AT1G53250"
## [505] "AT1G53300" "AT1G53620" "AT1G53625" "AT1G53700" "AT1G53830" "AT1G53920" "AT1G54100"
## [512] "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54730" "AT1G54740" "AT1G54780" "AT1G54820"
## [519] "AT1G54890" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490" "AT1G55610" "AT1G55670"
## [526] "AT1G55790" "AT1G56120" "AT1G56210" "AT1G56240" "AT1G56242" "AT1G56430" "AT1G56470"
## [533] "AT1G56500" "AT1G56550" "AT1G56650" "AT1G56660" "AT1G56710" "AT1G56720" "AT1G57560"
## [540] "AT1G57630" "AT1G57650" "AT1G57943" "AT1G57990" "AT1G58150" "AT1G58370" "AT1G59590"
## [547] "AT1G59640" "AT1G59740" "AT1G59840" "AT1G59950" "AT1G60000" "AT1G60160" "AT1G60190"
## [554] "AT1G60390" "AT1G60420" "AT1G60550" "AT1G60590" "AT1G60600" "AT1G60610" "AT1G60690"
## [561] "AT1G60700" "AT1G60730" "AT1G60800" "AT1G60890" "AT1G60950" "AT1G61065" "AT1G61140"
## [568] "AT1G61160" "AT1G61215" "AT1G61240" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [575] "AT1G61520" "AT1G61550" "AT1G61560" "AT1G61795" "AT1G61800" "AT1G61810" "AT1G61820"
## [582] "AT1G62300" "AT1G62422" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62570" "AT1G62580"
## [589] "AT1G62750" "AT1G62760" "AT1G62840" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63245"
## [596] "AT1G63400" "AT1G63440" "AT1G63460" "AT1G63480" "AT1G63720" "AT1G63740" "AT1G63820"
## [603] "AT1G63840" "AT1G64065" "AT1G64150" "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64610"
## [610] "AT1G64625" "AT1G64660" "AT1G64680" "AT1G64720" "AT1G64770" "AT1G65230" "AT1G65483"
## [617] "AT1G65490" "AT1G65590" "AT1G65610" "AT1G65690" "AT1G65860" "AT1G65900" "AT1G66040"
## [624] "AT1G66090" "AT1G66100" "AT1G66130" "AT1G66140" "AT1G66170" "AT1G66180" "AT1G66280"
## [631] "AT1G66410" "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725"
## [638] "AT1G66810" "AT1G66820" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67040" "AT1G67060"
## [645] "AT1G67070" "AT1G67090" "AT1G67190" "AT1G67195" "AT1G67360" "AT1G67520" "AT1G67590"
## [652] "AT1G67635" "AT1G67650" "AT1G67700" "AT1G67740" "AT1G67750" "AT1G67800" "AT1G67810"
## [659] "AT1G67850" "AT1G67856" "AT1G67970" "AT1G67980" "AT1G68010" "AT1G68190" "AT1G68200"
## [666] "AT1G68238" "AT1G68250" "AT1G68390" "AT1G68400" "AT1G68440" "AT1G68520" "AT1G68530"
## [673] "AT1G68560" "AT1G68620" "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68810" "AT1G68820"
## [680] "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940" "AT1G69050" "AT1G69140" "AT1G69260"
## [687] "AT1G69480" "AT1G69490" "AT1G69520" "AT1G69530" "AT1G69610" "AT1G69720" "AT1G69790"
## [694] "AT1G69840" "AT1G69880" "AT1G69930" "AT1G70220" "AT1G70280" "AT1G70370" "AT1G70410"
## [701] "AT1G70430" "AT1G70460" "AT1G70480" "AT1G70500" "AT1G70640" "AT1G70690" "AT1G70760"
## [708] "AT1G70810" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71100" "AT1G71520" "AT1G71690"
## [715] "AT1G71697" "AT1G71870" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125" "AT1G72140"
## [722] "AT1G72220" "AT1G72240" "AT1G72270" "AT1G72310" "AT1G72330" "AT1G72420" "AT1G72430"
## [729] "AT1G72540" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700"
## [736] "AT1G72770" "AT1G72810" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [743] "AT1G72950" "AT1G73010" "AT1G73066" "AT1G73110" "AT1G73260" "AT1G73325" "AT1G73550"
## [750] "AT1G73590" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73965" "AT1G74070" "AT1G74080"
## [757] "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74370" "AT1G74470" "AT1G74670" "AT1G74710"
## [764] "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75170" "AT1G75250" "AT1G75360" "AT1G75388"
## [771] "AT1G75390" "AT1G75500" "AT1G75510" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [778] "AT1G75800" "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470"
## [785] "AT1G76590" "AT1G76610" "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000"
## [792] "AT1G77131" "AT1G77145" "AT1G77210" "AT1G77280" "AT1G77400" "AT1G77490" "AT1G77500"
## [799] "AT1G77630" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78020" "AT1G78060"
## [806] "AT1G78190" "AT1G78260" "AT1G78320" "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78450"
## [813] "AT1G78460" "AT1G78570" "AT1G78780" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G78970"
## [820] "AT1G78995" "AT1G79060" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G79760" "AT1G79770"
## [827] "AT1G79900" "AT1G80030" "AT1G80080" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300"
## [834] "AT1G80450" "AT1G80520" "AT1G80530" "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630"
## [841] "AT1G80640" "AT1G80690" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01420" "AT2G01540"
## [848] "AT2G01590" "AT2G01630" "AT2G01650" "AT2G01760" "AT2G01818" "AT2G01990" "AT2G02020"
## [855] "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02390" "AT2G02780"
## [862] "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03090" "AT2G03270" "AT2G03420" "AT2G03750"
## [869] "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100" "AT2G04380" "AT2G04400" "AT2G04430"
## [876] "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04780" "AT2G04790" "AT2G04900" "AT2G05070"
## [883] "AT2G05160" "AT2G05320" "AT2G05630" "AT2G05790" "AT2G05910" "AT2G05914" "AT2G05940"
## [890] "AT2G05995" "AT2G06255" "AT2G06850" "AT2G07687" "AT2G07688" "AT2G07732" "AT2G10940"
## [897] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13790" "AT2G13810" "AT2G13820" "AT2G13960"
## [904] "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620" "AT2G14800" "AT2G14880" "AT2G14890"
## [911] "AT2G15090" "AT2G15400" "AT2G15440" "AT2G15760" "AT2G15860" "AT2G15880" "AT2G16060"
## [918] "AT2G16270" "AT2G16367" "AT2G16530" "AT2G16630" "AT2G16700" "AT2G16710" "AT2G16720"
## [925] "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17230" "AT2G17500" "AT2G17720"
## [932] "AT2G17740" "AT2G17780" "AT2G18000" "AT2G18300" "AT2G18560" "AT2G18660" "AT2G18690"
## [939] "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170" "AT2G19190" "AT2G19620" "AT2G19690"
## [946] "AT2G19710" "AT2G19800" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20180" "AT2G20210"
## [953] "AT2G20290" "AT2G20340" "AT2G20680" "AT2G20825" "AT2G20890" "AT2G21050" "AT2G21080"
## [960] "AT2G21140" "AT2G21188" "AT2G21330" "AT2G21350" "AT2G21470" "AT2G21510" "AT2G21660"
## [967] "AT2G21780" "AT2G21830" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [974] "AT2G22770" "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23030" "AT2G23100"
## [981] "AT2G23110" "AT2G23130" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23590" "AT2G23600"
## [988] "AT2G23680" "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24060" "AT2G24090" "AT2G24150"
## [995] "AT2G24170" "AT2G24240" "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24580"
## [ reached getOption("max.print") -- omitted 2203 entries ]
##
## $`M12-V12_up_down`
## [1] "AT1G01010" "AT1G01030" "AT1G01190" "AT1G01340" "AT1G01430" "AT1G01470" "AT1G01480"
## [8] "AT1G01520" "AT1G01560" "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205"
## [15] "AT1G02220" "AT1G02230" "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02640"
## [22] "AT1G02650" "AT1G02710" "AT1G02750" "AT1G03050" "AT1G03130" "AT1G03300" "AT1G03457"
## [29] "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04310" "AT1G04490" "AT1G04570" "AT1G04700"
## [36] "AT1G04730" "AT1G04780" "AT1G04980" "AT1G05100" "AT1G05420" "AT1G05680" "AT1G05690"
## [43] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06160" "AT1G06180" "AT1G06570"
## [50] "AT1G06620" "AT1G06760" "AT1G07150" "AT1G07300" "AT1G07430" "AT1G07500" "AT1G07590"
## [57] "AT1G07600" "AT1G07610" "AT1G07670" "AT1G07880" "AT1G08050" "AT1G08300" "AT1G08380"
## [64] "AT1G08560" "AT1G08860" "AT1G08900" "AT1G08920" "AT1G09080" "AT1G09180" "AT1G09200"
## [71] "AT1G09240" "AT1G09350" "AT1G09440" "AT1G09530" "AT1G09750" "AT1G09950" "AT1G10020"
## [78] "AT1G10230" "AT1G10340" "AT1G10380" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [85] "AT1G10586" "AT1G10657" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G10910" "AT1G10930"
## [92] "AT1G10990" "AT1G11000" "AT1G11185" "AT1G11350" "AT1G11380" "AT1G11400" "AT1G11480"
## [99] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12460" "AT1G12540" "AT1G12700" "AT1G12730"
## [106] "AT1G12860" "AT1G13110" "AT1G13280" "AT1G13310" "AT1G13330" "AT1G13340" "AT1G13650"
## [113] "AT1G13700" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14070" "AT1G14120"
## [120] "AT1G14180" "AT1G14185" "AT1G14260" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15010"
## [127] "AT1G15100" "AT1G15110" "AT1G15125" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [134] "AT1G15430" "AT1G15520" "AT1G15550" "AT1G15670" "AT1G15890" "AT1G15980" "AT1G15990"
## [141] "AT1G16300" "AT1G16640" "AT1G16850" "AT1G17147" "AT1G17380" "AT1G17420" "AT1G17500"
## [148] "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G17990" "AT1G18000"
## [155] "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550" "AT1G18620"
## [162] "AT1G18650" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19340"
## [169] "AT1G19490" "AT1G19570" "AT1G19610" "AT1G19620" "AT1G19640" "AT1G19650" "AT1G19670"
## [176] "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310" "AT1G20440" "AT1G20450"
## [183] "AT1G20640" "AT1G20970" "AT1G21000" "AT1G21050" "AT1G21120" "AT1G21130" "AT1G21326"
## [190] "AT1G21410" "AT1G21520" "AT1G21525" "AT1G21550" "AT1G21580" "AT1G21910" "AT1G21920"
## [197] "AT1G22220" "AT1G22330" "AT1G22370" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490"
## [204] "AT1G22590" "AT1G22740" "AT1G22770" "AT1G23040" "AT1G23050" "AT1G23052" "AT1G23080"
## [211] "AT1G23120" "AT1G23200" "AT1G23205" "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23550"
## [218] "AT1G23750" "AT1G23850" "AT1G24090" "AT1G24145" "AT1G24147" "AT1G24210" "AT1G24600"
## [225] "AT1G25422" "AT1G25425" "AT1G25440" "AT1G25450" "AT1G25500" "AT1G26150" "AT1G26420"
## [232] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26800" "AT1G26920" "AT1G26930"
## [239] "AT1G26960" "AT1G27020" "AT1G27110" "AT1G27300" "AT1G27420" "AT1G27460" "AT1G27480"
## [246] "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050" "AT1G28330" "AT1G28360"
## [253] "AT1G28370" "AT1G28400" "AT1G28480" "AT1G28660" "AT1G28670" "AT1G29050" "AT1G29195"
## [260] "AT1G29290" "AT1G29330" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [267] "AT1G29510" "AT1G29600" "AT1G29640" "AT1G29660" "AT1G29715" "AT1G30040" "AT1G30100"
## [274] "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320" "AT1G30520" "AT1G30620" "AT1G30814"
## [281] "AT1G30840" "AT1G30850" "AT1G31120" "AT1G31173" "AT1G31290" "AT1G31355" "AT1G31550"
## [288] "AT1G31820" "AT1G31835" "AT1G31900" "AT1G31920" "AT1G31950" "AT1G32560" "AT1G32640"
## [295] "AT1G32730" "AT1G32740" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33055" "AT1G33110"
## [302] "AT1G33240" "AT1G33260" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34180" "AT1G34315"
## [309] "AT1G34420" "AT1G35140" "AT1G35210" "AT1G36940" "AT1G42980" "AT1G43160" "AT1G43245"
## [316] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G44900" "AT1G45145" "AT1G47510"
## [323] "AT1G47890" "AT1G48000" "AT1G48100" "AT1G48260" "AT1G48315" "AT1G48320" "AT1G48370"
## [330] "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49050" "AT1G49200" "AT1G49230" "AT1G49450"
## [337] "AT1G49520" "AT1G50040" "AT1G50180" "AT1G50260" "AT1G50590" "AT1G50640" "AT1G50732"
## [344] "AT1G51140" "AT1G51400" "AT1G51402" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G51850"
## [351] "AT1G51920" "AT1G51940" "AT1G52030" "AT1G52190" "AT1G52230" "AT1G52315" "AT1G52565"
## [358] "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52750" "AT1G52760" "AT1G52770" "AT1G52800"
## [365] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53070" "AT1G53230" "AT1G53233"
## [372] "AT1G53320" "AT1G53410" "AT1G53470" "AT1G53560" "AT1G53620" "AT1G53625" "AT1G53760"
## [379] "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100" "AT1G54120" "AT1G54130" "AT1G54570"
## [386] "AT1G54730" "AT1G54740" "AT1G54820" "AT1G54890" "AT1G55330" "AT1G55370" "AT1G55610"
## [393] "AT1G56220" "AT1G56580" "AT1G56720" "AT1G57560" "AT1G57610" "AT1G57630" "AT1G57650"
## [400] "AT1G57943" "AT1G58225" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740" "AT1G59950"
## [407] "AT1G60190" "AT1G60270" "AT1G60390" "AT1G60830" "AT1G60860" "AT1G61065" "AT1G61110"
## [414] "AT1G61120" "AT1G61140" "AT1G61190" "AT1G61215" "AT1G61240" "AT1G61255" "AT1G61260"
## [421] "AT1G61300" "AT1G61340" "AT1G61500" "AT1G61610" "AT1G61640" "AT1G61795" "AT1G61890"
## [428] "AT1G62520" "AT1G62790" "AT1G62840" "AT1G62910" "AT1G63080" "AT1G63245" "AT1G63260"
## [435] "AT1G63400" "AT1G63530" "AT1G63570" "AT1G63720" "AT1G63880" "AT1G64320" "AT1G64380"
## [442] "AT1G64610" "AT1G64620" "AT1G64625" "AT1G64660" "AT1G64670" "AT1G65295" "AT1G65500"
## [449] "AT1G65610" "AT1G65845" "AT1G66090" "AT1G66170" "AT1G66180" "AT1G66280" "AT1G66550"
## [456] "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G66810" "AT1G66920"
## [463] "AT1G66940" "AT1G67070" "AT1G67420" "AT1G67590" "AT1G68190" "AT1G68200" "AT1G68250"
## [470] "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68520" "AT1G68585" "AT1G68620"
## [477] "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69260" "AT1G69360" "AT1G69480"
## [484] "AT1G69600" "AT1G69610" "AT1G69780" "AT1G69790" "AT1G69840" "AT1G69870" "AT1G69930"
## [491] "AT1G70100" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [498] "AT1G70800" "AT1G70810" "AT1G70940" "AT1G71030" "AT1G71100" "AT1G71690" "AT1G71697"
## [505] "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72120" "AT1G72210" "AT1G72240" "AT1G72270"
## [512] "AT1G72330" "AT1G72416" "AT1G72430" "AT1G72450" "AT1G72520" "AT1G72600" "AT1G72610"
## [519] "AT1G72645" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900"
## [526] "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010" "AT1G73110" "AT1G73390" "AT1G73480"
## [533] "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73830" "AT1G73890" "AT1G73965"
## [540] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74670" "AT1G74710" "AT1G74930" "AT1G74940"
## [547] "AT1G74950" "AT1G75020" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75220" "AT1G75250"
## [554] "AT1G75370" "AT1G75388" "AT1G75390" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580"
## [561] "AT1G75750" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76100" "AT1G76180" "AT1G76240"
## [568] "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650" "AT1G76760" "AT1G76790" "AT1G76960"
## [575] "AT1G76980" "AT1G77131" "AT1G77138" "AT1G77200" "AT1G77210" "AT1G77280" "AT1G77450"
## [582] "AT1G77500" "AT1G77510" "AT1G77640" "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890"
## [589] "AT1G77990" "AT1G78000" "AT1G78070" "AT1G78080" "AT1G78190" "AT1G78210" "AT1G78265"
## [596] "AT1G78270" "AT1G78380" "AT1G78450" "AT1G78570" "AT1G78820" "AT1G78830" "AT1G78860"
## [603] "AT1G78940" "AT1G79110" "AT1G79170" "AT1G79270" "AT1G79400" "AT1G79520" "AT1G79570"
## [610] "AT1G79760" "AT1G79960" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [617] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80630" "AT1G80820" "AT1G80840" "AT1G80850"
## [624] "AT2G01340" "AT2G01420" "AT2G01450" "AT2G01630" "AT2G01860" "AT2G01890" "AT2G02020"
## [631] "AT2G02310" "AT2G02340" "AT2G02780" "AT2G02870" "AT2G02950" "AT2G02980" "AT2G03310"
## [638] "AT2G03470" "AT2G03750" "AT2G03760" "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450"
## [645] "AT2G05160" "AT2G05260" "AT2G05632" "AT2G05790" "AT2G05940" "AT2G06050" "AT2G06255"
## [652] "AT2G06850" "AT2G07680" "AT2G07690" "AT2G13550" "AT2G13650" "AT2G13960" "AT2G14050"
## [659] "AT2G14290" "AT2G14660" "AT2G14890" "AT2G15760" "AT2G15880" "AT2G15890" "AT2G16720"
## [666] "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17500" "AT2G17720" "AT2G17740" "AT2G17780"
## [673] "AT2G17880" "AT2G18090" "AT2G18196" "AT2G18300" "AT2G18560" "AT2G18690" "AT2G18890"
## [680] "AT2G18917" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20110" "AT2G20142" "AT2G20170"
## [687] "AT2G20180" "AT2G20825" "AT2G20880" "AT2G20950" "AT2G21188" "AT2G21350" "AT2G21640"
## [694] "AT2G21780" "AT2G22200" "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22810"
## [701] "AT2G22830" "AT2G22860" "AT2G22890" "AT2G23030" "AT2G23100" "AT2G23110" "AT2G23290"
## [708] "AT2G23340" "AT2G23450" "AT2G23600" "AT2G23760" "AT2G23810" "AT2G24170" "AT2G24210"
## [715] "AT2G24280" "AT2G24285" "AT2G24350" "AT2G24610" "AT2G24850" "AT2G25130" "AT2G25200"
## [722] "AT2G25240" "AT2G25460" "AT2G25470" "AT2G25625" "AT2G25680" "AT2G25790" "AT2G25900"
## [729] "AT2G26480" "AT2G26530" "AT2G26710" "AT2G26870" "AT2G27310" "AT2G27500" "AT2G27505"
## [736] "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28040" "AT2G28050" "AT2G28120" "AT2G28200"
## [743] "AT2G28400" "AT2G28460" "AT2G28570" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950"
## [750] "AT2G29290" "AT2G29320" "AT2G29410" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470"
## [757] "AT2G29670" "AT2G30020" "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395"
## [764] "AT2G30400" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30540" "AT2G30550" "AT2G30720"
## [771] "AT2G30750" "AT2G30820" "AT2G30830" "AT2G30930" "AT2G31150" "AT2G31180" "AT2G31380"
## [778] "AT2G31751" "AT2G31940" "AT2G31945" "AT2G32100" "AT2G32130" "AT2G32140" "AT2G32150"
## [785] "AT2G32210" "AT2G32235" "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33020"
## [792] "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33380" "AT2G33480" "AT2G33830" "AT2G34010"
## [799] "AT2G34070" "AT2G34080" "AT2G34500" "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34810"
## [806] "AT2G35170" "AT2G35260" "AT2G35290" "AT2G35550" "AT2G35590" "AT2G35700" "AT2G35710"
## [813] "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36050" "AT2G36080" "AT2G36200"
## [820] "AT2G36380" "AT2G36400" "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854"
## [827] "AT2G36970" "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37440" "AT2G37450" "AT2G37590"
## [834] "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870" "AT2G37950" "AT2G37980" "AT2G38240"
## [841] "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530" "AT2G38640" "AT2G38750"
## [848] "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39180" "AT2G39210" "AT2G39250" "AT2G39350"
## [855] "AT2G39430" "AT2G39520" "AT2G39580" "AT2G39725" "AT2G39730" "AT2G39800" "AT2G39980"
## [862] "AT2G40100" "AT2G40140" "AT2G40340" "AT2G40435" "AT2G40530" "AT2G40610" "AT2G40620"
## [869] "AT2G40711" "AT2G40750" "AT2G40850" "AT2G41070" "AT2G41250" "AT2G41410" "AT2G41540"
## [876] "AT2G41550" "AT2G41660" "AT2G41730" "AT2G41820" "AT2G41835" "AT2G41870" "AT2G41940"
## [883] "AT2G42040" "AT2G42150" "AT2G42170" "AT2G42300" "AT2G42320" "AT2G42350" "AT2G42380"
## [890] "AT2G42530" "AT2G42540" "AT2G42560" "AT2G42690" "AT2G42760" "AT2G42940" "AT2G42960"
## [897] "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43150" "AT2G43320" "AT2G43445" "AT2G43535"
## [904] "AT2G43550" "AT2G44370" "AT2G44380" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44630"
## [911] "AT2G44740" "AT2G44810" "AT2G44840" "AT2G44940" "AT2G45180" "AT2G45210" "AT2G45760"
## [918] "AT2G45830" "AT2G45850" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [925] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [932] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47440" "AT2G47480" "AT2G47560"
## [939] "AT2G47670" "AT2G47770" "AT2G47780" "AT2G47920" "AT2G47930" "AT2G47950" "AT3G01280"
## [946] "AT3G01290" "AT3G01480" "AT3G01490" "AT3G01830" "AT3G01840" "AT3G02140" "AT3G02150"
## [953] "AT3G02160" "AT3G02370" "AT3G02510" "AT3G02640" "AT3G02875" "AT3G02990" "AT3G03310"
## [960] "AT3G03440" "AT3G03650" "AT3G03820" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060"
## [967] "AT3G04160" "AT3G04181" "AT3G04300" "AT3G04420" "AT3G04630" "AT3G04720" "AT3G04960"
## [974] "AT3G05320" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05740"
## [981] "AT3G05800" "AT3G05810" "AT3G05900" "AT3G05905" "AT3G06020" "AT3G06030" "AT3G06035"
## [988] "AT3G06070" "AT3G06140" "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06740" "AT3G06890"
## [995] "AT3G07010" "AT3G07210" "AT3G07340" "AT3G07350" "AT3G07460" "AT3G07540"
## [ reached getOption("max.print") -- omitted 1228 entries ]
##
## $`A12-V12_up_down`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01370" "AT1G01470" "AT1G01610" "AT1G01620"
## [8] "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02400"
## [15] "AT1G02405" "AT1G02460" "AT1G02470" "AT1G02920" "AT1G02930" "AT1G03020" "AT1G03210"
## [22] "AT1G03850" "AT1G04220" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07150" "AT1G07370"
## [29] "AT1G07610" "AT1G08200" "AT1G08450" "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420"
## [36] "AT1G09500" "AT1G09530" "AT1G09950" "AT1G10070" "AT1G10370" "AT1G10530" "AT1G10560"
## [43] "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12290" "AT1G12420" "AT1G13420"
## [50] "AT1G13520" "AT1G13740" "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G14880"
## [57] "AT1G15080" "AT1G15100" "AT1G15125" "AT1G15170" "AT1G15180" "AT1G15310" "AT1G15380"
## [64] "AT1G15670" "AT1G15890" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17020" "AT1G17147"
## [71] "AT1G17420" "AT1G17460" "AT1G17940" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G19570"
## [78] "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030" "AT1G20070"
## [85] "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G21120" "AT1G21520" "AT1G21525"
## [92] "AT1G21740" "AT1G22550" "AT1G22770" "AT1G25275" "AT1G25422" "AT1G25425" "AT1G25450"
## [99] "AT1G25500" "AT1G26290" "AT1G26380" "AT1G26420" "AT1G26730" "AT1G26770" "AT1G26800"
## [106] "AT1G26920" "AT1G27030" "AT1G27330" "AT1G27350" "AT1G27640" "AT1G27730" "AT1G28010"
## [113] "AT1G28050" "AT1G28360" "AT1G29330" "AT1G30240" "AT1G30420" "AT1G30860" "AT1G31710"
## [120] "AT1G32210" "AT1G32860" "AT1G32910" "AT1G33030" "AT1G33055" "AT1G33950" "AT1G33960"
## [127] "AT1G34210" "AT1G35670" "AT1G36622" "AT1G43160" "AT1G44350" "AT1G44900" "AT1G47890"
## [134] "AT1G48100" "AT1G48260" "AT1G49450" "AT1G49650" "AT1G50520" "AT1G50640" "AT1G51090"
## [141] "AT1G51500" "AT1G51780" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52030" "AT1G52200"
## [148] "AT1G52720" "AT1G53110" "AT1G53170" "AT1G53620" "AT1G54010" "AT1G54030" "AT1G54040"
## [155] "AT1G54095" "AT1G55260" "AT1G55490" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G56580"
## [162] "AT1G58180" "AT1G58225" "AT1G58270" "AT1G58590" "AT1G59740" "AT1G60190" "AT1G60270"
## [169] "AT1G61110" "AT1G61160" "AT1G61340" "AT1G61810" "AT1G61820" "AT1G62440" "AT1G62790"
## [176] "AT1G62975" "AT1G63040" "AT1G63460" "AT1G64150" "AT1G64380" "AT1G64390" "AT1G64620"
## [183] "AT1G64670" "AT1G65470" "AT1G65486" "AT1G65490" "AT1G65845" "AT1G65860" "AT1G66280"
## [190] "AT1G66345" "AT1G66960" "AT1G67420" "AT1G67520" "AT1G67630" "AT1G67810" "AT1G67980"
## [197] "AT1G68350" "AT1G68500" "AT1G68585" "AT1G69140" "AT1G69295" "AT1G69490" "AT1G69530"
## [204] "AT1G69543" "AT1G69600" "AT1G69720" "AT1G69870" "AT1G70300" "AT1G70640" "AT1G70700"
## [211] "AT1G71970" "AT1G72040" "AT1G72060" "AT1G72070" "AT1G72140" "AT1G72180" "AT1G73210"
## [218] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74590" "AT1G74950"
## [225] "AT1G75170" "AT1G75370" "AT1G75580" "AT1G75800" "AT1G75830" "AT1G76610" "AT1G76790"
## [232] "AT1G76960" "AT1G77145" "AT1G77680" "AT1G77920" "AT1G78060" "AT1G78070" "AT1G78080"
## [239] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79170" "AT1G79450" "AT1G79570"
## [246] "AT1G79960" "AT1G80060" "AT1G80120" "AT1G80460" "AT1G80530" "AT1G80580" "AT1G80820"
## [253] "AT1G80840" "AT1G80850" "AT2G01818" "AT2G01830" "AT2G01890" "AT2G02060" "AT2G02350"
## [260] "AT2G02360" "AT2G02930" "AT2G03760" "AT2G04080" "AT2G04515" "AT2G06050" "AT2G06255"
## [267] "AT2G07690" "AT2G14560" "AT2G14610" "AT2G16630" "AT2G17040" "AT2G17450" "AT2G18660"
## [274] "AT2G18969" "AT2G18970" "AT2G19190" "AT2G20880" "AT2G21140" "AT2G21185" "AT2G21187"
## [281] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23170" "AT2G23340"
## [288] "AT2G23760" "AT2G23840" "AT2G24040" "AT2G24210" "AT2G24240" "AT2G24390" "AT2G25130"
## [295] "AT2G25625" "AT2G26560" "AT2G27389" "AT2G27390" "AT2G27510" "AT2G27660" "AT2G27820"
## [302] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28790" "AT2G28940" "AT2G29350"
## [309] "AT2G29440" "AT2G29450" "AT2G29470" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G29950"
## [316] "AT2G30040" "AT2G30360" "AT2G30362" "AT2G30480" "AT2G30540" "AT2G30820" "AT2G30830"
## [323] "AT2G31020" "AT2G31380" "AT2G31730" "AT2G31865" "AT2G32160" "AT2G32235" "AT2G32240"
## [330] "AT2G32460" "AT2G32510" "AT2G32680" "AT2G32990" "AT2G33380" "AT2G33480" "AT2G33520"
## [337] "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960" "AT2G36380" "AT2G36590"
## [344] "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885" "AT2G37040" "AT2G37170"
## [351] "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G37750" "AT2G38530" "AT2G38540"
## [358] "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39320" "AT2G39980" "AT2G40110"
## [365] "AT2G40550" "AT2G40620" "AT2G40880" "AT2G41082" "AT2G41170" "AT2G41250" "AT2G41380"
## [372] "AT2G41440" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [379] "AT2G43000" "AT2G43018" "AT2G43020" "AT2G43150" "AT2G43535" "AT2G43550" "AT2G44370"
## [386] "AT2G44380" "AT2G44578" "AT2G44640" "AT2G44840" "AT2G44980" "AT2G45470" "AT2G45510"
## [393] "AT2G45960" "AT2G46370" "AT2G46380" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [400] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G02820" "AT3G03190"
## [407] "AT3G03470" "AT3G03610" "AT3G03650" "AT3G03780" "AT3G03980" "AT3G04000" "AT3G04010"
## [414] "AT3G04070" "AT3G04630" "AT3G04720" "AT3G05640" "AT3G05740" "AT3G05800" "AT3G05810"
## [421] "AT3G05870" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G07580"
## [428] "AT3G07600" "AT3G07800" "AT3G08030" "AT3G08670" "AT3G09032" "AT3G09940" "AT3G10320"
## [435] "AT3G10985" "AT3G11000" "AT3G11090" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [442] "AT3G12120" "AT3G12145" "AT3G12220" "AT3G12230" "AT3G12920" "AT3G13230" "AT3G13433"
## [449] "AT3G13437" "AT3G13790" "AT3G14067" "AT3G14280" "AT3G14700" "AT3G14740" "AT3G14870"
## [456] "AT3G15210" "AT3G15518" "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450"
## [463] "AT3G16460" "AT3G16500" "AT3G17120" "AT3G17510" "AT3G17860" "AT3G18250" "AT3G18730"
## [470] "AT3G19390" "AT3G19615" "AT3G19660" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G20340"
## [477] "AT3G21670" "AT3G21780" "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22460" "AT3G22560"
## [484] "AT3G23740" "AT3G23810" "AT3G24518" "AT3G24520" "AT3G25700" "AT3G25760" "AT3G25770"
## [491] "AT3G25780" "AT3G26060" "AT3G26210" "AT3G26220" "AT3G26230" "AT3G26440" "AT3G26470"
## [498] "AT3G26500" "AT3G26520" "AT3G27170" "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28540"
## [505] "AT3G28570" "AT3G28600" "AT3G28850" "AT3G28950" "AT3G29240" "AT3G43250" "AT3G43270"
## [512] "AT3G44300" "AT3G44490" "AT3G44870" "AT3G45140" "AT3G45290" "AT3G45330" "AT3G45860"
## [519] "AT3G45930" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47830" "AT3G47836"
## [526] "AT3G47960" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48490" "AT3G48510" "AT3G48520"
## [533] "AT3G48630" "AT3G48640" "AT3G48720" "AT3G49110" "AT3G49130" "AT3G49540" "AT3G49870"
## [540] "AT3G50260" "AT3G50410" "AT3G50550" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G51250"
## [547] "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920" "AT3G52290" "AT3G52630" "AT3G52748"
## [554] "AT3G53150" "AT3G53235" "AT3G53370" "AT3G53420" "AT3G54150" "AT3G54820" "AT3G54830"
## [561] "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260" "AT3G56270" "AT3G56500"
## [568] "AT3G56870" "AT3G56891" "AT3G57020" "AT3G57157" "AT3G57240" "AT3G57550" "AT3G57760"
## [575] "AT3G59050" "AT3G59052" "AT3G59100" "AT3G59710" "AT3G59940" "AT3G59970" "AT3G60220"
## [582] "AT3G60490" "AT3G60540" "AT3G61198" "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61490"
## [589] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62590" "AT3G62600" "AT3G62700" "AT3G62860"
## [596] "AT3G63030" "AT3G63200" "AT4G00360" "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030"
## [603] "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060" "AT4G02110" "AT4G02360" "AT4G02520"
## [610] "AT4G04620" "AT4G04740" "AT4G04840" "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06534"
## [617] "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08770" "AT4G08870" "AT4G09750" "AT4G10290"
## [624] "AT4G10390" "AT4G10860" "AT4G11070" "AT4G11300" "AT4G11320" "AT4G12000" "AT4G12005"
## [631] "AT4G12030" "AT4G12410" "AT4G13770" "AT4G13860" "AT4G13900" "AT4G14020" "AT4G14040"
## [638] "AT4G14440" "AT4G14800" "AT4G15100" "AT4G15210" "AT4G15530" "AT4G15610" "AT4G15770"
## [645] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G17660"
## [652] "AT4G18360" "AT4G18440" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21060"
## [659] "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21610" "AT4G21730" "AT4G21780" "AT4G21790"
## [666] "AT4G22010" "AT4G22520" "AT4G22620" "AT4G23060" "AT4G23260" "AT4G23271" "AT4G23420"
## [673] "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960" "AT4G24972" "AT4G25000" "AT4G25070"
## [680] "AT4G25433" "AT4G25700" "AT4G25830" "AT4G25900" "AT4G26700" "AT4G27350" "AT4G27410"
## [687] "AT4G27520" "AT4G27590" "AT4G27745" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G28310"
## [694] "AT4G28390" "AT4G28405" "AT4G29740" "AT4G30180" "AT4G30210" "AT4G30440" "AT4G30530"
## [701] "AT4G30640" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780" "AT4G32785" "AT4G32870"
## [708] "AT4G33220" "AT4G33355" "AT4G33467" "AT4G33925" "AT4G33970" "AT4G34060" "AT4G34135"
## [715] "AT4G34200" "AT4G34290" "AT4G34650" "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320"
## [722] "AT4G35480" "AT4G35550" "AT4G35560" "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36710"
## [729] "AT4G36780" "AT4G36900" "AT4G37310" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37520"
## [736] "AT4G37760" "AT4G37990" "AT4G38080" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810"
## [743] "AT4G39190" "AT4G39330" "AT4G39350" "AT4G39580" "AT4G39980" "AT5G01210" "AT5G01215"
## [750] "AT5G01550" "AT5G01610" "AT5G01760" "AT5G01840" "AT5G02170" "AT5G02460" "AT5G02502"
## [757] "AT5G02520" "AT5G02690" "AT5G03030" "AT5G03285" "AT5G04180" "AT5G04200" "AT5G04250"
## [764] "AT5G04530" "AT5G04770" "AT5G05270" "AT5G05300" "AT5G05440" "AT5G06310" "AT5G06570"
## [771] "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07650" "AT5G07660" "AT5G07690" "AT5G07700"
## [778] "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08640" "AT5G08760" "AT5G09290"
## [785] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10390" "AT5G10400" "AT5G10440" "AT5G10720"
## [792] "AT5G11920" "AT5G11950" "AT5G12860" "AT5G13220" "AT5G13400" "AT5G14200" "AT5G14420"
## [799] "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240" "AT5G15860"
## [806] "AT5G15870" "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17330" "AT5G17460"
## [813] "AT5G17490" "AT5G17520" "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20400"
## [820] "AT5G20740" "AT5G20960" "AT5G21280" "AT5G22500" "AT5G22740" "AT5G22880" "AT5G23010"
## [827] "AT5G23420" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155" "AT5G24205"
## [834] "AT5G24206" "AT5G24230" "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780"
## [841] "AT5G24910" "AT5G24920" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26260" "AT5G26731"
## [848] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38005"
## [855] "AT5G38120" "AT5G38130" "AT5G38900" "AT5G39320" "AT5G39520" "AT5G39680" "AT5G39950"
## [862] "AT5G40010" "AT5G40240" "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G40690"
## [869] "AT5G40720" "AT5G41120" "AT5G41160" "AT5G41315" "AT5G41590" "AT5G41600" "AT5G41880"
## [876] "AT5G42530" "AT5G42650" "AT5G42830" "AT5G42900" "AT5G43170" "AT5G43910" "AT5G44050"
## [883] "AT5G44210" "AT5G44420" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G45950" "AT5G46230"
## [890] "AT5G46500" "AT5G47220" "AT5G47240" "AT5G47330" "AT5G48180" "AT5G48290" "AT5G49690"
## [897] "AT5G50460" "AT5G52050" "AT5G52310" "AT5G52720" "AT5G52882" "AT5G52910" "AT5G52990"
## [904] "AT5G53200" "AT5G53760" "AT5G53820" "AT5G54300" "AT5G54490" "AT5G54500" "AT5G54840"
## [911] "AT5G55090" "AT5G55180" "AT5G55460" "AT5G55530" "AT5G56050" "AT5G56120" "AT5G56760"
## [918] "AT5G56870" "AT5G56880" "AT5G57010" "AT5G57100" "AT5G57260" "AT5G57550" "AT5G57800"
## [925] "AT5G58480" "AT5G58840" "AT5G58900" "AT5G59030" "AT5G59050" "AT5G59080" "AT5G59090"
## [932] "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59530" "AT5G59662" "AT5G59760" "AT5G59890"
## [939] "AT5G60530" "AT5G60850" "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61000" "AT5G61070"
## [946] "AT5G61160" "AT5G61460" "AT5G61490" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [953] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63135" "AT5G63240"
## [960] "AT5G63450" "AT5G63550" "AT5G64000" "AT5G64170" "AT5G64190" "AT5G64260" "AT5G64280"
## [967] "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280" "AT5G65350" "AT5G65360"
## [974] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66170" "AT5G66590" "AT5G66650" "AT5G67070"
## [981] "AT5G67100" "AT5G67180" "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"
## [988] "AT5G67600"
##
## $`M1-A1_up`
## [1] "AT3G21870" "ATCG01310"
##
## $`M1-V1_up`
## [1] "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420" "AT1G01520" "AT1G01600" "AT1G01610"
## [8] "AT1G02710" "AT1G02820" "AT1G03050" "AT1G03055" "AT1G03300" "AT1G03360" "AT1G04220"
## [15] "AT1G04250" "AT1G04530" "AT1G04550" "AT1G04660" "AT1G04770" "AT1G05560" "AT1G05562"
## [22] "AT1G05680" "AT1G07010" "AT1G07180" "AT1G07485" "AT1G07490" "AT1G08610" "AT1G09180"
## [29] "AT1G09820" "AT1G09900" "AT1G10460" "AT1G10960" "AT1G12330" "AT1G12370" "AT1G13030"
## [36] "AT1G13080" "AT1G13650" "AT1G13730" "AT1G13800" "AT1G13810" "AT1G14150" "AT1G14345"
## [43] "AT1G14840" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15870" "AT1G16350" "AT1G16390"
## [50] "AT1G16730" "AT1G17050" "AT1G18800" "AT1G19140" "AT1G19150" "AT1G19450" "AT1G19700"
## [57] "AT1G21500" "AT1G22590" "AT1G22850" "AT1G23100" "AT1G23410" "AT1G23740" "AT1G24148"
## [64] "AT1G26220" "AT1G26390" "AT1G26761" "AT1G27120" "AT1G27480" "AT1G28010" "AT1G29600"
## [71] "AT1G29660" "AT1G30960" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760" "AT1G32900"
## [78] "AT1G33170" "AT1G33410" "AT1G42550" "AT1G42970" "AT1G44000" "AT1G44446" "AT1G48100"
## [85] "AT1G48480" "AT1G48570" "AT1G49010" "AT1G49430" "AT1G49490" "AT1G49660" "AT1G50840"
## [92] "AT1G51080" "AT1G51100" "AT1G51310" "AT1G52830" "AT1G53090" "AT1G54500" "AT1G55260"
## [99] "AT1G55960" "AT1G58520" "AT1G59700" "AT1G61300" "AT1G62170" "AT1G62180" "AT1G62630"
## [106] "AT1G62720" "AT1G62750" "AT1G62760" "AT1G62960" "AT1G63250" "AT1G64220" "AT1G64500"
## [113] "AT1G64600" "AT1G64670" "AT1G64680" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900"
## [120] "AT1G64970" "AT1G65060" "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65920" "AT1G66130"
## [127] "AT1G66330" "AT1G66540" "AT1G66725" "AT1G66840" "AT1G67590" "AT1G67750" "AT1G68440"
## [134] "AT1G69200" "AT1G70000" "AT1G70250" "AT1G70580" "AT1G71850" "AT1G72040" "AT1G72270"
## [141] "AT1G72645" "AT1G72770" "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870" "AT1G73890"
## [148] "AT1G74070" "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280" "AT1G76240" "AT1G77580"
## [155] "AT1G77855" "AT1G78290" "AT1G78370" "AT1G78510" "AT1G78930" "AT1G80270" "AT1G80760"
## [162] "AT2G01280" "AT2G01890" "AT2G02150" "AT2G02230" "AT2G03550" "AT2G04030" "AT2G04039"
## [169] "AT2G04790" "AT2G05160" "AT2G11890" "AT2G14880" "AT2G15000" "AT2G15020" "AT2G17972"
## [176] "AT2G18230" "AT2G18330" "AT2G18560" "AT2G19670" "AT2G20020" "AT2G20585" "AT2G21185"
## [183] "AT2G21187" "AT2G21320" "AT2G21330" "AT2G22240" "AT2G23290" "AT2G23340" "AT2G23430"
## [190] "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440" "AT2G24540" "AT2G24545" "AT2G24580"
## [197] "AT2G24762" "AT2G24820" "AT2G25530" "AT2G25680" "AT2G26080" "AT2G26692" "AT2G27420"
## [204] "AT2G28790" "AT2G29090" "AT2G30100" "AT2G30150" "AT2G30520" "AT2G30760" "AT2G31380"
## [211] "AT2G31750" "AT2G31751" "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33855"
## [218] "AT2G35760" "AT2G35950" "AT2G36000" "AT2G36590" "AT2G36750" "AT2G36800" "AT2G37240"
## [225] "AT2G37460" "AT2G37630" "AT2G37970" "AT2G38750" "AT2G38760" "AT2G39730" "AT2G41050"
## [232] "AT2G41250" "AT2G41290" "AT2G41660" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43650"
## [239] "AT2G43710" "AT2G45340" "AT2G46670" "AT2G46790" "AT2G46810" "AT2G46830" "AT2G47370"
## [246] "AT2G47450" "AT2G47485" "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180"
## [253] "AT3G01440" "AT3G02830" "AT3G04140" "AT3G04950" "AT3G06145" "AT3G06520" "AT3G06750"
## [260] "AT3G06920" "AT3G07310" "AT3G07750" "AT3G07770" "AT3G09160" "AT3G09162" "AT3G09190"
## [267] "AT3G09600" "AT3G09650" "AT3G10040" "AT3G10110" "AT3G10525" "AT3G11090" "AT3G11110"
## [274] "AT3G12320" "AT3G13470" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15540" "AT3G15850"
## [281] "AT3G15990" "AT3G16520" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840" "AT3G18750"
## [288] "AT3G19000" "AT3G19440" "AT3G19450" "AT3G19480" "AT3G21390" "AT3G21460" "AT3G21890"
## [295] "AT3G22120" "AT3G22121" "AT3G22150" "AT3G22235" "AT3G23090" "AT3G23210" "AT3G23510"
## [302] "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190" "AT3G24460" "AT3G25030" "AT3G25670"
## [309] "AT3G26570" "AT3G27350" "AT3G27415" "AT3G27416" "AT3G28040" "AT3G28540" "AT3G30460"
## [316] "AT3G43960" "AT3G44020" "AT3G44300" "AT3G46090" "AT3G46900" "AT3G47070" "AT3G47420"
## [323] "AT3G47430" "AT3G48280" "AT3G48560" "AT3G48660" "AT3G48690" "AT3G49240" "AT3G49470"
## [330] "AT3G49570" "AT3G50685" "AT3G51420" "AT3G51750" "AT3G51895" "AT3G52720" "AT3G52920"
## [337] "AT3G53700" "AT3G53830" "AT3G53920" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500"
## [344] "AT3G54720" "AT3G54900" "AT3G56080" "AT3G56160" "AT3G56290" "AT3G56300" "AT3G56330"
## [351] "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180" "AT3G57190" "AT3G57400" "AT3G58840"
## [358] "AT3G58990" "AT3G59220" "AT3G59250" "AT3G59400" "AT3G61220" "AT3G61780" "AT3G61880"
## [365] "AT3G63200" "AT3G63530" "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070"
## [372] "AT4G01080" "AT4G01535" "AT4G02630" "AT4G02990" "AT4G03600" "AT4G04020" "AT4G04610"
## [379] "AT4G05110" "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620" "AT4G11100"
## [386] "AT4G11175" "AT4G12390" "AT4G12830" "AT4G12880" "AT4G12980" "AT4G13800" "AT4G14440"
## [393] "AT4G14690" "AT4G15210" "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550" "AT4G15810"
## [400] "AT4G16140" "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16980" "AT4G17180" "AT4G17680"
## [407] "AT4G17880" "AT4G17970" "AT4G19170" "AT4G20090" "AT4G20360" "AT4G21880" "AT4G21990"
## [414] "AT4G23680" "AT4G23770" "AT4G24540" "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780"
## [421] "AT4G26600" "AT4G26800" "AT4G26850" "AT4G27030" "AT4G27700" "AT4G28660" "AT4G28700"
## [428] "AT4G28730" "AT4G28740" "AT4G28780" "AT4G30470" "AT4G30610" "AT4G30960" "AT4G31210"
## [435] "AT4G31390" "AT4G31870" "AT4G32770" "AT4G33010" "AT4G33560" "AT4G34550" "AT4G34610"
## [442] "AT4G34630" "AT4G35090" "AT4G36580" "AT4G36950" "AT4G37650" "AT4G37800" "AT4G37925"
## [449] "AT4G38060" "AT4G38680" "AT4G38960" "AT4G38970" "AT4G39330" "AT4G39470" "AT4G39510"
## [456] "AT4G39800" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [463] "AT5G02180" "AT5G02230" "AT5G02540" "AT5G02830" "AT5G02950" "AT5G03555" "AT5G03760"
## [470] "AT5G05270" "AT5G05580" "AT5G06550" "AT5G06790" "AT5G08610" "AT5G08720" "AT5G08760"
## [477] "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470" "AT5G12080" "AT5G12110" "AT5G13400"
## [484] "AT5G13730" "AT5G13770" "AT5G13920" "AT5G14350" "AT5G14580" "AT5G14610" "AT5G14740"
## [491] "AT5G15600" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340" "AT5G16530"
## [498] "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300"
## [505] "AT5G19730" "AT5G19850" "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380"
## [512] "AT5G21100" "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23730" "AT5G23750" "AT5G23760"
## [519] "AT5G24105" "AT5G24120" "AT5G24150" "AT5G24165" "AT5G24280" "AT5G24380" "AT5G24580"
## [526] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25590" "AT5G25630"
## [533] "AT5G28500" "AT5G38420" "AT5G38430" "AT5G39710" "AT5G43400" "AT5G43630" "AT5G43850"
## [540] "AT5G44190" "AT5G44490" "AT5G45800" "AT5G46220" "AT5G46580" "AT5G47220" "AT5G47360"
## [547] "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48850" "AT5G48910" "AT5G49100" "AT5G49740"
## [554] "AT5G50100" "AT5G51540" "AT5G51720" "AT5G52570" "AT5G53170" "AT5G53200" "AT5G53970"
## [561] "AT5G54130" "AT5G54470" "AT5G54585" "AT5G54610" "AT5G54630" "AT5G55570" "AT5G55730"
## [568] "AT5G55740" "AT5G55790" "AT5G56850" "AT5G56860" "AT5G57030" "AT5G57180" "AT5G57240"
## [575] "AT5G58770" "AT5G58870" "AT5G59780" "AT5G61030" "AT5G61130" "AT5G61350" "AT5G61670"
## [582] "AT5G62130" "AT5G62140" "AT5G62370" "AT5G63530" "AT5G63630" "AT5G63700" "AT5G64170"
## [589] "AT5G64710" "AT5G64840" "AT5G64940" "AT5G65380" "AT5G65820" "AT5G66270" "AT5G66740"
## [596] "AT5G66960" "AT5G67030" "AT5G67370" "AT5G67385" "ATCG00330" "ATCG00905" "ATCG00920"
## [603] "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960" "ATCG00970" "ATCG01130" "ATCG01170"
## [610] "ATCG01190" "ATCG01300" "ATCG01310" "ATMG00030" "ATMG00050" "ATMG01130"
##
## $`A1-V1_up`
## [1] "AT1G02710" "AT1G10960" "AT1G21500" "AT1G55260" "AT1G62170" "AT1G62180" "AT1G64500" "AT2G21320"
## [9] "AT2G24762" "AT2G46830" "AT3G09600" "AT3G19450" "AT3G53830" "AT3G56290" "AT3G61220" "AT3G63200"
## [17] "AT4G12390" "AT4G37650" "AT5G11550" "AT5G12080" "AT5G18690" "AT5G23760" "AT5G24120" "AT5G24280"
## [25] "AT5G47610" "AT5G48570" "AT5G54610" "AT5G58770" "AT5G62140"
##
## $`M6-A6_up`
## [1] "AT1G01120" "AT1G01390" "AT1G01430" "AT1G02205" "AT1G02610" "AT1G02620" "AT1G02820"
## [8] "AT1G03020" "AT1G03130" "AT1G03310" "AT1G03600" "AT1G03610" "AT1G03630" "AT1G04680"
## [15] "AT1G04770" "AT1G05540" "AT1G06040" "AT1G06460" "AT1G06680" "AT1G07050" "AT1G07280"
## [22] "AT1G07440" "AT1G08380" "AT1G08550" "AT1G09310" "AT1G09340" "AT1G09350" "AT1G10020"
## [29] "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G11130" "AT1G11180" "AT1G11260"
## [36] "AT1G11290" "AT1G11362" "AT1G11380" "AT1G11925" "AT1G12090" "AT1G12450" "AT1G12500"
## [43] "AT1G12710" "AT1G12730" "AT1G12900" "AT1G13245" "AT1G13650" "AT1G13700" "AT1G13930"
## [50] "AT1G14030" "AT1G14150" "AT1G14160" "AT1G14345" "AT1G14700" "AT1G14720" "AT1G15040"
## [57] "AT1G15080" "AT1G15150" "AT1G15160" "AT1G15290" "AT1G15550" "AT1G15690" "AT1G15820"
## [64] "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G16080" "AT1G16400" "AT1G16410"
## [71] "AT1G16720" "AT1G16730" "AT1G17100" "AT1G17850" "AT1G17970" "AT1G18000" "AT1G18010"
## [78] "AT1G18265" "AT1G18330" "AT1G18485" "AT1G19150" "AT1G19450" "AT1G19510" "AT1G19715"
## [85] "AT1G19720" "AT1G20010" "AT1G20020" "AT1G20030" "AT1G20440" "AT1G21500" "AT1G21910"
## [92] "AT1G22190" "AT1G22330" "AT1G22360" "AT1G22370" "AT1G22380" "AT1G22480" "AT1G22490"
## [99] "AT1G22500" "AT1G22530" "AT1G22550" "AT1G22570" "AT1G22590" "AT1G22630" "AT1G22690"
## [106] "AT1G22770" "AT1G23050" "AT1G23052" "AT1G23205" "AT1G23390" "AT1G23400" "AT1G23480"
## [113] "AT1G23740" "AT1G25400" "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26761" "AT1G26800"
## [120] "AT1G27480" "AT1G27950" "AT1G28010" "AT1G28330" "AT1G29090" "AT1G29280" "AT1G29430"
## [127] "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29530" "AT1G29600" "AT1G29670"
## [134] "AT1G29680" "AT1G29715" "AT1G30520" "AT1G31173" "AT1G31330" "AT1G31920" "AT1G32060"
## [141] "AT1G32080" "AT1G33170" "AT1G33240" "AT1G33760" "AT1G35140" "AT1G35420" "AT1G36370"
## [148] "AT1G36675" "AT1G42550" "AT1G43670" "AT1G44000" "AT1G44446" "AT1G45010" "AT1G47370"
## [155] "AT1G47440" "AT1G47580" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49380" "AT1G49490"
## [162] "AT1G49650" "AT1G49975" "AT1G49990" "AT1G50040" "AT1G50290" "AT1G50590" "AT1G50732"
## [169] "AT1G51400" "AT1G51402" "AT1G51805" "AT1G51940" "AT1G52230" "AT1G52342" "AT1G52770"
## [176] "AT1G53160" "AT1G54780" "AT1G54790" "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55480"
## [183] "AT1G56670" "AT1G56720" "AT1G57590" "AT1G60160" "AT1G60550" "AT1G60590" "AT1G60690"
## [190] "AT1G60800" "AT1G61300" "AT1G61520" "AT1G61795" "AT1G62170" "AT1G62180" "AT1G62510"
## [197] "AT1G62560" "AT1G62630" "AT1G63040" "AT1G63090" "AT1G63570" "AT1G63930" "AT1G64355"
## [204] "AT1G64625" "AT1G64680" "AT1G64770" "AT1G64900" "AT1G65230" "AT1G65390" "AT1G65590"
## [211] "AT1G66130" "AT1G66230" "AT1G66840" "AT1G66930" "AT1G67265" "AT1G67590" "AT1G67740"
## [218] "AT1G67910" "AT1G68010" "AT1G68050" "AT1G68190" "AT1G68520" "AT1G68540" "AT1G68670"
## [225] "AT1G68830" "AT1G68890" "AT1G69140" "AT1G69890" "AT1G70090" "AT1G70290" "AT1G70580"
## [232] "AT1G70820" "AT1G71000" "AT1G71030" "AT1G72030" "AT1G72140" "AT1G72150" "AT1G72270"
## [239] "AT1G72416" "AT1G72430" "AT1G72500" "AT1G72600" "AT1G72610" "AT1G72630" "AT1G72640"
## [246] "AT1G72645" "AT1G73325" "AT1G73480" "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870"
## [253] "AT1G73890" "AT1G74070" "AT1G74875" "AT1G74930" "AT1G74940" "AT1G75250" "AT1G75460"
## [260] "AT1G75690" "AT1G75770" "AT1G75900" "AT1G75960" "AT1G76080" "AT1G76100" "AT1G76110"
## [267] "AT1G76690" "AT1G76955" "AT1G77090" "AT1G77210" "AT1G77630" "AT1G77640" "AT1G78000"
## [274] "AT1G78100" "AT1G78450" "AT1G78600" "AT1G78990" "AT1G78995" "AT1G79330" "AT1G79770"
## [281] "AT1G79780" "AT1G80440" "AT1G80630" "AT1G80920" "AT2G01590" "AT2G01755" "AT2G01760"
## [288] "AT2G01850" "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02710" "AT2G02950"
## [295] "AT2G02990" "AT2G03310" "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03710" "AT2G04790"
## [302] "AT2G04795" "AT2G05070" "AT2G05100" "AT2G05160" "AT2G05995" "AT2G06520" "AT2G13360"
## [309] "AT2G15020" "AT2G15090" "AT2G15890" "AT2G15970" "AT2G16365" "AT2G16630" "AT2G16660"
## [316] "AT2G17230" "AT2G17695" "AT2G17780" "AT2G18160" "AT2G18162" "AT2G18300" "AT2G18560"
## [323] "AT2G18700" "AT2G18940" "AT2G19310" "AT2G20250" "AT2G20670" "AT2G20680" "AT2G21130"
## [330] "AT2G21140" "AT2G21320" "AT2G21330" "AT2G21830" "AT2G21970" "AT2G22122" "AT2G22810"
## [337] "AT2G22830" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23290" "AT2G23590" "AT2G23600"
## [344] "AT2G23840" "AT2G24110" "AT2G24550" "AT2G24580" "AT2G24610" "AT2G25130" "AT2G25200"
## [351] "AT2G25270" "AT2G25450" "AT2G25900" "AT2G26080" "AT2G26710" "AT2G26870" "AT2G26975"
## [358] "AT2G27420" "AT2G28120" "AT2G28305" "AT2G28605" "AT2G28900" "AT2G29090" "AT2G29170"
## [365] "AT2G29280" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29320" "AT2G29360" "AT2G29450"
## [372] "AT2G29630" "AT2G29650" "AT2G29670" "AT2G30150" "AT2G30390" "AT2G30420" "AT2G30600"
## [379] "AT2G30615" "AT2G30930" "AT2G31360" "AT2G31790" "AT2G32100" "AT2G32179" "AT2G32180"
## [386] "AT2G32290" "AT2G32470" "AT2G32480" "AT2G32530" "AT2G32540" "AT2G32560" "AT2G32640"
## [393] "AT2G33060" "AT2G33255" "AT2G33330" "AT2G33735" "AT2G33855" "AT2G34410" "AT2G34420"
## [400] "AT2G34510" "AT2G34600" "AT2G34620" "AT2G34760" "AT2G35130" "AT2G35260" "AT2G35660"
## [407] "AT2G35760" "AT2G35960" "AT2G36050" "AT2G36830" "AT2G36990" "AT2G37220" "AT2G37450"
## [414] "AT2G37530" "AT2G37540" "AT2G37585" "AT2G37790" "AT2G37950" "AT2G38210" "AT2G38230"
## [421] "AT2G38460" "AT2G38530" "AT2G38540" "AT2G38820" "AT2G39730" "AT2G39880" "AT2G39920"
## [428] "AT2G39980" "AT2G40000" "AT2G40080" "AT2G40150" "AT2G40330" "AT2G40540" "AT2G40840"
## [435] "AT2G40960" "AT2G41050" "AT2G41430" "AT2G41480" "AT2G41990" "AT2G42320" "AT2G42380"
## [442] "AT2G42485" "AT2G43010" "AT2G43100" "AT2G43120" "AT2G43550" "AT2G45180" "AT2G45560"
## [449] "AT2G45850" "AT2G46790" "AT2G47440" "AT2G47485" "AT2G47920" "AT3G01060" "AT3G01440"
## [456] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02730" "AT3G03190" "AT3G03480" "AT3G03780"
## [463] "AT3G04445" "AT3G04550" "AT3G04960" "AT3G05625" "AT3G05936" "AT3G06070" "AT3G06145"
## [470] "AT3G06160" "AT3G06520" "AT3G07310" "AT3G07350" "AT3G07500" "AT3G08000" "AT3G08920"
## [477] "AT3G08940" "AT3G09050" "AT3G09160" "AT3G09162" "AT3G09580" "AT3G10020" "AT3G10520"
## [484] "AT3G11110" "AT3G11700" "AT3G12110" "AT3G12520" "AT3G12685" "AT3G13470" "AT3G13750"
## [491] "AT3G14200" "AT3G14415" "AT3G14850" "AT3G15354" "AT3G15450" "AT3G15500" "AT3G15570"
## [498] "AT3G15720" "AT3G15850" "AT3G16175" "AT3G16250" "AT3G16350" "AT3G17170" "AT3G17350"
## [505] "AT3G17470" "AT3G17640" "AT3G17930" "AT3G18080" "AT3G18710" "AT3G18750" "AT3G18773"
## [512] "AT3G19000" "AT3G19002" "AT3G19480" "AT3G19680" "AT3G19690" "AT3G19700" "AT3G19930"
## [519] "AT3G20350" "AT3G20470" "AT3G20480" "AT3G20640" "AT3G20680" "AT3G20820" "AT3G21352"
## [526] "AT3G21460" "AT3G21755" "AT3G21760" "AT3G21870" "AT3G22150" "AT3G22420" "AT3G22760"
## [533] "AT3G23080" "AT3G23450" "AT3G23810" "AT3G23880" "AT3G24030" "AT3G24430" "AT3G24460"
## [540] "AT3G25410" "AT3G25717" "AT3G25760" "AT3G26280" "AT3G26290" "AT3G26320" "AT3G26490"
## [547] "AT3G26510" "AT3G26570" "AT3G26740" "AT3G27690" "AT3G28070" "AT3G28200" "AT3G28420"
## [554] "AT3G29035" "AT3G29185" "AT3G29320" "AT3G44020" "AT3G44990" "AT3G45230" "AT3G45430"
## [561] "AT3G45780" "AT3G45970" "AT3G46130" "AT3G46370" "AT3G46580" "AT3G46630" "AT3G46640"
## [568] "AT3G46970" "AT3G47070" "AT3G47430" "AT3G47470" "AT3G47500" "AT3G47750" "AT3G48200"
## [575] "AT3G48280" "AT3G48350" "AT3G48420" "AT3G48460" "AT3G48720" "AT3G49470" "AT3G49570"
## [582] "AT3G49580" "AT3G49790" "AT3G49930" "AT3G50060" "AT3G50120" "AT3G50685" "AT3G50840"
## [589] "AT3G51080" "AT3G51400" "AT3G51420" "AT3G51510" "AT3G51600" "AT3G52070" "AT3G52072"
## [596] "AT3G52840" "AT3G53420" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54050" "AT3G54060"
## [603] "AT3G54500" "AT3G54600" "AT3G54830" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630"
## [610] "AT3G55646" "AT3G55760" "AT3G55800" "AT3G56000" "AT3G56160" "AT3G56290" "AT3G56360"
## [617] "AT3G57020" "AT3G57190" "AT3G57765" "AT3G58200" "AT3G58620" "AT3G58990" "AT3G59060"
## [624] "AT3G59120" "AT3G59250" "AT3G59710" "AT3G59940" "AT3G60290" "AT3G60390" "AT3G61060"
## [631] "AT3G61220" "AT3G61870" "AT3G61900" "AT3G62410" "AT3G62550" "AT3G62630" "AT3G62750"
## [638] "AT3G62860" "AT3G62950" "AT3G63160" "AT4G00165" "AT4G00360" "AT4G00370" "AT4G01130"
## [645] "AT4G01330" "AT4G01670" "AT4G01985" "AT4G02630" "AT4G02770" "AT4G03400" "AT4G03510"
## [652] "AT4G04330" "AT4G04340" "AT4G04610" "AT4G04745" "AT4G04810" "AT4G04830" "AT4G04840"
## [659] "AT4G05070" "AT4G06534" "AT4G06536" "AT4G07400" "AT4G09350" "AT4G09650" "AT4G09670"
## [666] "AT4G09760" "AT4G10120" "AT4G10290" "AT4G10340" "AT4G11360" "AT4G11521" "AT4G12310"
## [673] "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12420" "AT4G12730" "AT4G12830" "AT4G12900"
## [680] "AT4G12917" "AT4G12980" "AT4G13340" "AT4G13810" "AT4G13830" "AT4G14270" "AT4G14358"
## [687] "AT4G14540" "AT4G14740" "AT4G15210" "AT4G15450" "AT4G15630" "AT4G15670" "AT4G16563"
## [694] "AT4G16740" "AT4G16980" "AT4G17090" "AT4G17340" "AT4G17360" "AT4G17460" "AT4G17810"
## [701] "AT4G18210" "AT4G18240" "AT4G18980" "AT4G19170" "AT4G19420" "AT4G19530" "AT4G20140"
## [708] "AT4G20260" "AT4G20820" "AT4G20840" "AT4G20860" "AT4G21280" "AT4G21445" "AT4G21870"
## [715] "AT4G21880" "AT4G21990" "AT4G23890" "AT4G24090" "AT4G24130" "AT4G24230" "AT4G24350"
## [722] "AT4G24660" "AT4G24670" "AT4G24700" "AT4G24810" "AT4G25050" "AT4G25080" "AT4G25470"
## [729] "AT4G25480" "AT4G25780" "AT4G25810" "AT4G26150" "AT4G26370" "AT4G26520" "AT4G26530"
## [736] "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27450" "AT4G27700" "AT4G27720" "AT4G27730"
## [743] "AT4G27820" "AT4G28703" "AT4G28740" "AT4G29190" "AT4G29905" "AT4G30250" "AT4G31850"
## [750] "AT4G32340" "AT4G32350" "AT4G32480" "AT4G32770" "AT4G32800" "AT4G32980" "AT4G33000"
## [757] "AT4G33010" "AT4G33220" "AT4G33467" "AT4G33625" "AT4G33660" "AT4G33980" "AT4G34090"
## [764] "AT4G34220" "AT4G34250" "AT4G34730" "AT4G34900" "AT4G34950" "AT4G35090" "AT4G35320"
## [771] "AT4G36040" "AT4G36410" "AT4G36530" "AT4G36670" "AT4G37240" "AT4G37260" "AT4G37450"
## [778] "AT4G37610" "AT4G37800" "AT4G37925" "AT4G38400" "AT4G38430" "AT4G38470" "AT4G38770"
## [785] "AT4G38840" "AT4G39330" "AT4G39710" "AT4G39770" "AT5G01015" "AT5G01410" "AT5G01520"
## [792] "AT5G02010" "AT5G02120" "AT5G02160" "AT5G02180" "AT5G02810" "AT5G02830" "AT5G02950"
## [799] "AT5G03285" "AT5G04190" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05740" "AT5G05890"
## [806] "AT5G06220" "AT5G06690" "AT5G06790" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [813] "AT5G08720" "AT5G09440" "AT5G09660" "AT5G09820" "AT5G10150" "AT5G10470" "AT5G10690"
## [820] "AT5G11070" "AT5G11160" "AT5G11410" "AT5G11580" "AT5G11610" "AT5G12050" "AT5G12080"
## [827] "AT5G12110" "AT5G12420" "AT5G12950" "AT5G13630" "AT5G13730" "AT5G14200" "AT5G14360"
## [834] "AT5G14740" "AT5G15350" "AT5G16370" "AT5G16400" "AT5G16810" "AT5G17670" "AT5G18030"
## [841] "AT5G18080" "AT5G18570" "AT5G18670" "AT5G19100" "AT5G19120" "AT5G19140" "AT5G19190"
## [848] "AT5G19730" "AT5G19940" "AT5G20225" "AT5G20250" "AT5G20670" "AT5G20740" "AT5G20935"
## [855] "AT5G21100" "AT5G21222" "AT5G21430" "AT5G21930" "AT5G21940" "AT5G22640" "AT5G22920"
## [862] "AT5G23010" "AT5G23060" "AT5G23210" "AT5G23360" "AT5G23870" "AT5G23920" "AT5G23980"
## [869] "AT5G24000" "AT5G24030" "AT5G24120" "AT5G24150" "AT5G24155" "AT5G24160" "AT5G24460"
## [876] "AT5G24470" "AT5G24490" "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140"
## [883] "AT5G25190" "AT5G25210" "AT5G25240" "AT5G25610" "AT5G25630" "AT5G26220" "AT5G26230"
## [890] "AT5G26820" "AT5G27290" "AT5G27350" "AT5G27390" "AT5G28020" "AT5G28030" "AT5G28500"
## [897] "AT5G28610" "AT5G28640" "AT5G28770" "AT5G35170" "AT5G35790" "AT5G36002" "AT5G38290"
## [904] "AT5G38410" "AT5G38510" "AT5G38520" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860"
## [911] "AT5G40380" "AT5G40890" "AT5G41050" "AT5G41080" "AT5G41590" "AT5G41761" "AT5G41800"
## [918] "AT5G41900" "AT5G42070" "AT5G42200" "AT5G42450" "AT5G43270" "AT5G43750" "AT5G43870"
## [925] "AT5G44005" "AT5G44020" "AT5G44130" "AT5G44190" "AT5G44260" "AT5G44410" "AT5G44600"
## [932] "AT5G45650" "AT5G45680" "AT5G45820" "AT5G45830" "AT5G46220" "AT5G46580" "AT5G46600"
## [939] "AT5G47240" "AT5G47330" "AT5G47370" "AT5G47440" "AT5G47900" "AT5G48545" "AT5G48850"
## [946] "AT5G48910" "AT5G49390" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49740" "AT5G50450"
## [953] "AT5G50950" "AT5G51390" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G51950" "AT5G51970"
## [960] "AT5G52100" "AT5G52120" "AT5G52310" "AT5G52970" "AT5G54145" "AT5G54148" "AT5G54170"
## [967] "AT5G54270" "AT5G54300" "AT5G54585" "AT5G54980" "AT5G55180" "AT5G55740" "AT5G56100"
## [974] "AT5G56544" "AT5G56550" "AT5G56850" "AT5G57100" "AT5G57170" "AT5G57340" "AT5G57550"
## [981] "AT5G57560" "AT5G57630" "AT5G57660" "AT5G57800" "AT5G57880" "AT5G57887" "AT5G58260"
## [988] "AT5G58310" "AT5G58770" "AT5G58900" "AT5G59130" "AT5G59310" "AT5G59730" "AT5G59750"
## [995] "AT5G60400" "AT5G60680" "AT5G61350" "AT5G61590" "AT5G61890" "AT5G62140"
## [ reached getOption("max.print") -- omitted 30 entries ]
##
## $`M6-V6_up`
## [1] "AT1G01190" "AT1G01390" "AT1G02610" "AT1G02660" "AT1G03130" "AT1G03600" "AT1G03630"
## [8] "AT1G03680" "AT1G04250" "AT1G04770" "AT1G05675" "AT1G06040" "AT1G06460" "AT1G06680"
## [15] "AT1G07050" "AT1G07280" "AT1G07440" "AT1G08380" "AT1G09310" "AT1G09340" "AT1G09350"
## [22] "AT1G10020" "AT1G10150" "AT1G10657" "AT1G10760" "AT1G10960" "AT1G12090" "AT1G12710"
## [29] "AT1G12730" "AT1G12845" "AT1G12900" "AT1G13245" "AT1G13260" "AT1G13650" "AT1G13930"
## [36] "AT1G14150" "AT1G14160" "AT1G14200" "AT1G14250" "AT1G14345" "AT1G14700" "AT1G15810"
## [43] "AT1G15820" "AT1G15825" "AT1G15830" "AT1G15980" "AT1G15990" "AT1G17147" "AT1G17970"
## [50] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18265" "AT1G18330" "AT1G18485" "AT1G18870"
## [57] "AT1G19150" "AT1G19960" "AT1G20010" "AT1G20020" "AT1G20340" "AT1G21130" "AT1G21500"
## [64] "AT1G21550" "AT1G21910" "AT1G22370" "AT1G22590" "AT1G22630" "AT1G22690" "AT1G22770"
## [71] "AT1G23390" "AT1G23740" "AT1G24020" "AT1G25275" "AT1G25400" "AT1G25560" "AT1G26800"
## [78] "AT1G27330" "AT1G27480" "AT1G29430" "AT1G29440" "AT1G29460" "AT1G29500" "AT1G29510"
## [85] "AT1G29670" "AT1G29910" "AT1G29920" "AT1G30380" "AT1G31330" "AT1G31690" "AT1G32060"
## [92] "AT1G32080" "AT1G32220" "AT1G33170" "AT1G33475" "AT1G33600" "AT1G35140" "AT1G36370"
## [99] "AT1G43310" "AT1G43670" "AT1G44446" "AT1G44575" "AT1G49200" "AT1G50590" "AT1G51080"
## [106] "AT1G51110" "AT1G51400" "AT1G51402" "AT1G51610" "AT1G51805" "AT1G52200" "AT1G52220"
## [113] "AT1G52230" "AT1G52342" "AT1G52510" "AT1G53163" "AT1G54410" "AT1G54780" "AT1G54790"
## [120] "AT1G54820" "AT1G55330" "AT1G55370" "AT1G55450" "AT1G55670" "AT1G56300" "AT1G56340"
## [127] "AT1G57590" "AT1G57990" "AT1G59860" "AT1G60800" "AT1G61190" "AT1G61300" "AT1G61520"
## [134] "AT1G62520" "AT1G64760" "AT1G64770" "AT1G65230" "AT1G65390" "AT1G66130" "AT1G66230"
## [141] "AT1G66910" "AT1G66930" "AT1G67340" "AT1G67590" "AT1G67740" "AT1G67910" "AT1G68050"
## [148] "AT1G68840" "AT1G69140" "AT1G69570" "AT1G69572" "AT1G69830" "AT1G69890" "AT1G70090"
## [155] "AT1G70420" "AT1G70580" "AT1G70820" "AT1G71000" "AT1G71030" "AT1G71970" "AT1G72416"
## [162] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72640" "AT1G72645" "AT1G73470" "AT1G73480"
## [169] "AT1G73600" "AT1G73602" "AT1G73750" "AT1G73870" "AT1G74070" "AT1G74730" "AT1G74940"
## [176] "AT1G75280" "AT1G75690" "AT1G75900" "AT1G76080" "AT1G76100" "AT1G76600" "AT1G76690"
## [183] "AT1G77210" "AT1G78000" "AT1G78600" "AT1G78830" "AT1G78990" "AT1G78995" "AT1G79330"
## [190] "AT1G80440" "AT1G80920" "AT2G01008" "AT2G01010" "AT2G01020" "AT2G01590" "AT2G01755"
## [197] "AT2G01870" "AT2G01890" "AT2G01918" "AT2G02070" "AT2G02450" "AT2G03310" "AT2G03410"
## [204] "AT2G03420" "AT2G03440" "AT2G03550" "AT2G03750" "AT2G04790" "AT2G04795" "AT2G05070"
## [211] "AT2G05100" "AT2G05160" "AT2G06520" "AT2G13360" "AT2G15090" "AT2G15890" "AT2G15970"
## [218] "AT2G16270" "AT2G16365" "AT2G17230" "AT2G17880" "AT2G18160" "AT2G18162" "AT2G18300"
## [225] "AT2G18350" "AT2G18560" "AT2G18700" "AT2G19310" "AT2G21130" "AT2G21320" "AT2G21330"
## [232] "AT2G21970" "AT2G22810" "AT2G22830" "AT2G23170" "AT2G23290" "AT2G23840" "AT2G24240"
## [239] "AT2G24550" "AT2G24580" "AT2G24645" "AT2G25200" "AT2G25735" "AT2G25900" "AT2G26150"
## [246] "AT2G26560" "AT2G26710" "AT2G26870" "AT2G27385" "AT2G27420" "AT2G28120" "AT2G28605"
## [253] "AT2G28900" "AT2G29170" "AT2G29290" "AT2G29300" "AT2G29310" "AT2G29360" "AT2G29630"
## [260] "AT2G29650" "AT2G30150" "AT2G30420" "AT2G30570" "AT2G30615" "AT2G31040" "AT2G31945"
## [267] "AT2G32100" "AT2G32500" "AT2G32640" "AT2G33830" "AT2G34410" "AT2G34420" "AT2G34430"
## [274] "AT2G34620" "AT2G35660" "AT2G36145" "AT2G36390" "AT2G36430" "AT2G37530" "AT2G37540"
## [281] "AT2G37585" "AT2G37950" "AT2G38480" "AT2G39400" "AT2G39730" "AT2G39900" "AT2G39980"
## [288] "AT2G40000" "AT2G40080" "AT2G40100" "AT2G40150" "AT2G40330" "AT2G40340" "AT2G40550"
## [295] "AT2G40610" "AT2G40840" "AT2G40960" "AT2G41430" "AT2G42485" "AT2G42530" "AT2G42540"
## [302] "AT2G43010" "AT2G43120" "AT2G44130" "AT2G44490" "AT2G45180" "AT2G45560" "AT2G45850"
## [309] "AT2G46240" "AT2G46790" "AT2G46820" "AT2G46830" "AT2G47920" "AT3G01060" "AT3G01440"
## [316] "AT3G01500" "AT3G01810" "AT3G02550" "AT3G02730" "AT3G04210" "AT3G04300" "AT3G04380"
## [323] "AT3G06070" "AT3G06145" "AT3G06160" "AT3G07200" "AT3G07310" "AT3G07320" "AT3G07350"
## [330] "AT3G08000" "AT3G08920" "AT3G08940" "AT3G09162" "AT3G09440" "AT3G09580" "AT3G10020"
## [337] "AT3G10060" "AT3G10520" "AT3G10720" "AT3G10940" "AT3G11090" "AT3G11110" "AT3G13437"
## [344] "AT3G13470" "AT3G14200" "AT3G15570" "AT3G15630" "AT3G15840" "AT3G16130" "AT3G16250"
## [351] "AT3G17390" "AT3G17640" "AT3G17840" "AT3G18050" "AT3G18080" "AT3G18500" "AT3G18710"
## [358] "AT3G18773" "AT3G18890" "AT3G19000" "AT3G19002" "AT3G19615" "AT3G19680" "AT3G19690"
## [365] "AT3G21055" "AT3G21780" "AT3G21950" "AT3G22210" "AT3G23880" "AT3G24430" "AT3G24515"
## [372] "AT3G25670" "AT3G26180" "AT3G26290" "AT3G26510" "AT3G26740" "AT3G27690" "AT3G29320"
## [379] "AT3G29330" "AT3G45970" "AT3G46370" "AT3G46630" "AT3G46640" "AT3G46780" "AT3G46970"
## [386] "AT3G47070" "AT3G47460" "AT3G47470" "AT3G47500" "AT3G48200" "AT3G48280" "AT3G48420"
## [393] "AT3G48720" "AT3G49570" "AT3G49580" "AT3G49790" "AT3G50060" "AT3G50820" "AT3G50840"
## [400] "AT3G50920" "AT3G50960" "AT3G51080" "AT3G51400" "AT3G51470" "AT3G51750" "AT3G52070"
## [407] "AT3G52072" "AT3G52180" "AT3G52960" "AT3G53470" "AT3G53800" "AT3G53830" "AT3G54490"
## [414] "AT3G54500" "AT3G54890" "AT3G55240" "AT3G55580" "AT3G55630" "AT3G55760" "AT3G55800"
## [421] "AT3G56160" "AT3G56290" "AT3G56940" "AT3G57740" "AT3G59060" "AT3G59870" "AT3G59900"
## [428] "AT3G59940" "AT3G60390" "AT3G61060" "AT3G61470" "AT3G61550" "AT3G61760" "AT3G61870"
## [435] "AT3G62410" "AT3G62550" "AT3G62950" "AT3G63140" "AT3G63160" "AT4G00165" "AT4G00970"
## [442] "AT4G01330" "AT4G01670" "AT4G02075" "AT4G02770" "AT4G03400" "AT4G03510" "AT4G04020"
## [449] "AT4G04330" "AT4G04340" "AT4G04810" "AT4G04830" "AT4G05070" "AT4G05180" "AT4G06534"
## [456] "AT4G08950" "AT4G09010" "AT4G09650" "AT4G09750" "AT4G09760" "AT4G10120" "AT4G10340"
## [463] "AT4G11300" "AT4G11360" "AT4G11521" "AT4G12320" "AT4G12330" "AT4G12390" "AT4G12800"
## [470] "AT4G12830" "AT4G12900" "AT4G12980" "AT4G13010" "AT4G13340" "AT4G13810" "AT4G14270"
## [477] "AT4G14560" "AT4G14830" "AT4G15210" "AT4G15233" "AT4G15248" "AT4G15975" "AT4G16146"
## [484] "AT4G16515" "AT4G16880" "AT4G16980" "AT4G17100" "AT4G17460" "AT4G17810" "AT4G18205"
## [491] "AT4G18220" "AT4G19170" "AT4G19530" "AT4G20820" "AT4G20840" "AT4G21280" "AT4G21445"
## [498] "AT4G21870" "AT4G21990" "AT4G22560" "AT4G22690" "AT4G22890" "AT4G23180" "AT4G23800"
## [505] "AT4G23810" "AT4G24240" "AT4G25290" "AT4G25480" "AT4G25810" "AT4G25940" "AT4G26520"
## [512] "AT4G26530" "AT4G27030" "AT4G27310" "AT4G27440" "AT4G27700" "AT4G28240" "AT4G28270"
## [519] "AT4G28703" "AT4G28750" "AT4G29190" "AT4G30650" "AT4G30662" "AT4G32280" "AT4G32340"
## [526] "AT4G32590" "AT4G32980" "AT4G33010" "AT4G33490" "AT4G33625" "AT4G33660" "AT4G33980"
## [533] "AT4G34220" "AT4G34250" "AT4G34630" "AT4G34900" "AT4G35655" "AT4G36040" "AT4G36530"
## [540] "AT4G37110" "AT4G37260" "AT4G37390" "AT4G37610" "AT4G37925" "AT4G38550" "AT4G38552"
## [547] "AT4G38770" "AT4G39260" "AT4G39580" "AT4G39710" "AT4G39730" "AT5G01015" "AT5G01520"
## [554] "AT5G01530" "AT5G02160" "AT5G02180" "AT5G02760" "AT5G02810" "AT5G02890" "AT5G03285"
## [561] "AT5G03360" "AT5G05090" "AT5G05330" "AT5G05440" "AT5G05580" "AT5G05890" "AT5G06220"
## [568] "AT5G06230" "AT5G06290" "AT5G06690" "AT5G06980" "AT5G07580" "AT5G08150" "AT5G08410"
## [575] "AT5G09660" "AT5G10250" "AT5G10340" "AT5G10690" "AT5G11070" "AT5G11242" "AT5G12110"
## [582] "AT5G12950" "AT5G13630" "AT5G13730" "AT5G16350" "AT5G16370" "AT5G16400" "AT5G16810"
## [589] "AT5G18030" "AT5G18080" "AT5G18660" "AT5G19120" "AT5G19190" "AT5G19940" "AT5G20250"
## [596] "AT5G21430" "AT5G21940" "AT5G22920" "AT5G23210" "AT5G23235" "AT5G23240" "AT5G23360"
## [603] "AT5G24120" "AT5G24155" "AT5G24300" "AT5G24460" "AT5G24470" "AT5G24660" "AT5G24890"
## [610] "AT5G25130" "AT5G25240" "AT5G25280" "AT5G26220" "AT5G26230" "AT5G27290" "AT5G28610"
## [617] "AT5G28630" "AT5G28910" "AT5G35480" "AT5G35970" "AT5G38410" "AT5G38510" "AT5G38980"
## [624] "AT5G38990" "AT5G39020" "AT5G39080" "AT5G39210" "AT5G39530" "AT5G39860" "AT5G40500"
## [631] "AT5G41050" "AT5G41761" "AT5G42200" "AT5G43440" "AT5G43750" "AT5G44005" "AT5G44060"
## [638] "AT5G44070" "AT5G44260" "AT5G44410" "AT5G44680" "AT5G45670" "AT5G45680" "AT5G45820"
## [645] "AT5G45830" "AT5G46110" "AT5G46220" "AT5G46600" "AT5G47370" "AT5G48545" "AT5G48570"
## [652] "AT5G48850" "AT5G48880" "AT5G49448" "AT5G49450" "AT5G49730" "AT5G49900" "AT5G50450"
## [659] "AT5G50740" "AT5G51460" "AT5G51550" "AT5G51720" "AT5G51910" "AT5G52100" "AT5G54145"
## [666] "AT5G54148" "AT5G54270" "AT5G54280" "AT5G54585" "AT5G54770" "AT5G55740" "AT5G56010"
## [673] "AT5G56100" "AT5G56544" "AT5G56550" "AT5G57170" "AT5G57560" "AT5G57660" "AT5G58310"
## [680] "AT5G59130" "AT5G60100" "AT5G60270" "AT5G60400" "AT5G60680" "AT5G61160" "AT5G61270"
## [687] "AT5G61350" "AT5G61440" "AT5G61590" "AT5G61600" "AT5G62140" "AT5G62280" "AT5G62430"
## [694] "AT5G62720" "AT5G62730" "AT5G63140" "AT5G63380" "AT5G63700" "AT5G63780" "AT5G63820"
## [701] "AT5G64040" "AT5G64170" "AT5G64190" "AT5G65207" "AT5G66520" "AT5G66570" "AT5G66580"
## [708] "AT5G67370" "AT5G67420" "ATCG00010" "ATCG00020" "ATCG00140" "ATCG00270" "ATCG00280"
## [715] "ATCG00330" "ATCG00340" "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00680" "ATCG00710"
## [722] "ATCG00720" "ATCG00730" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950" "ATCG00960"
## [729] "ATCG00970" "ATCG01060" "ATCG01160" "ATCG01170" "ATCG01180" "ATCG01190" "ATCG01200"
## [736] "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00030"
##
## $`A6-V6_up`
## [1] "AT1G01340" "AT1G01560" "AT1G01680" "AT1G02220" "AT1G02270" "AT1G02390" "AT1G02450"
## [8] "AT1G02920" "AT1G03050" "AT1G03055" "AT1G03495" "AT1G03850" "AT1G04490" "AT1G05010"
## [15] "AT1G05020" "AT1G05630" "AT1G05675" "AT1G05880" "AT1G06148" "AT1G06360" "AT1G08050"
## [22] "AT1G08860" "AT1G10230" "AT1G11310" "AT1G11330" "AT1G11905" "AT1G12210" "AT1G13110"
## [29] "AT1G13310" "AT1G13550" "AT1G14200" "AT1G14870" "AT1G15405" "AT1G15520" "AT1G17147"
## [36] "AT1G17615" "AT1G18020" "AT1G18390" "AT1G19020" "AT1G19250" "AT1G19960" "AT1G21250"
## [43] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22400" "AT1G22770" "AT1G23200" "AT1G25370"
## [50] "AT1G27100" "AT1G30040" "AT1G30190" "AT1G30270" "AT1G30420" "AT1G31280" "AT1G31290"
## [57] "AT1G31690" "AT1G32920" "AT1G32940" "AT1G32960" "AT1G33800" "AT1G35210" "AT1G35230"
## [64] "AT1G43310" "AT1G43910" "AT1G44900" "AT1G51660" "AT1G52200" "AT1G53620" "AT1G53625"
## [71] "AT1G55450" "AT1G56060" "AT1G56240" "AT1G56242" "AT1G56520" "AT1G57990" "AT1G59865"
## [78] "AT1G61140" "AT1G61370" "AT1G63750" "AT1G63820" "AT1G64710" "AT1G66550" "AT1G66600"
## [85] "AT1G67635" "AT1G67800" "AT1G67810" "AT1G67920" "AT1G68200" "AT1G68390" "AT1G70420"
## [92] "AT1G70690" "AT1G71100" "AT1G72930" "AT1G73805" "AT1G74710" "AT1G75830" "AT1G76970"
## [99] "AT1G77500" "AT1G78380" "AT1G79680" "AT2G02930" "AT2G04040" "AT2G04070" "AT2G04430"
## [106] "AT2G04450" "AT2G05070" "AT2G07687" "AT2G07690" "AT2G13810" "AT2G15042" "AT2G15480"
## [113] "AT2G16440" "AT2G18660" "AT2G20110" "AT2G21510" "AT2G21790" "AT2G23810" "AT2G24160"
## [120] "AT2G24240" "AT2G24285" "AT2G24490" "AT2G25737" "AT2G26150" "AT2G26240" "AT2G26440"
## [127] "AT2G26560" "AT2G28210" "AT2G28570" "AT2G28890" "AT2G29720" "AT2G31018" "AT2G31020"
## [134] "AT2G31270" "AT2G32200" "AT2G32210" "AT2G34500" "AT2G36470" "AT2G37560" "AT2G37940"
## [141] "AT2G37980" "AT2G38790" "AT2G39110" "AT2G40340" "AT2G40550" "AT2G41380" "AT2G41835"
## [148] "AT2G42950" "AT2G45760" "AT2G46330" "AT2G46430" "AT2G46440" "AT2G47130" "AT2G47140"
## [155] "AT2G47730" "AT3G01290" "AT3G02840" "AT3G04210" "AT3G04640" "AT3G05360" "AT3G07195"
## [162] "AT3G07720" "AT3G09010" "AT3G09440" "AT3G11010" "AT3G11340" "AT3G11840" "AT3G13080"
## [169] "AT3G13100" "AT3G13610" "AT3G13910" "AT3G14620" "AT3G15356" "AT3G16510" "AT3G19010"
## [176] "AT3G19260" "AT3G21320" "AT3G21560" "AT3G21780" "AT3G22370" "AT3G22910" "AT3G23530"
## [183] "AT3G25610" "AT3G25882" "AT3G26210" "AT3G26470" "AT3G26600" "AT3G26830" "AT3G28580"
## [190] "AT3G28930" "AT3G29240" "AT3G29400" "AT3G41768" "AT3G44350" "AT3G44830" "AT3G45260"
## [197] "AT3G46520" "AT3G46940" "AT3G47540" "AT3G47820" "AT3G48090" "AT3G48640" "AT3G48850"
## [204] "AT3G49110" "AT3G49540" "AT3G50470" "AT3G50480" "AT3G52430" "AT3G54150" "AT3G55470"
## [211] "AT3G55500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57700" "AT3G60190" "AT3G60420"
## [218] "AT3G60450" "AT3G60966" "AT3G61760" "AT4G00955" "AT4G01360" "AT4G01870" "AT4G01895"
## [225] "AT4G01950" "AT4G02380" "AT4G02420" "AT4G02550" "AT4G05030" "AT4G09300" "AT4G09570"
## [232] "AT4G11000" "AT4G11280" "AT4G11300" "AT4G11840" "AT4G13180" "AT4G14220" "AT4G14368"
## [239] "AT4G14610" "AT4G15070" "AT4G16820" "AT4G16880" "AT4G18250" "AT4G18880" "AT4G19660"
## [246] "AT4G21380" "AT4G21840" "AT4G21903" "AT4G22520" "AT4G22530" "AT4G22980" "AT4G23010"
## [253] "AT4G23170" "AT4G23180" "AT4G23250" "AT4G23570" "AT4G24160" "AT4G25110" "AT4G25900"
## [260] "AT4G27745" "AT4G28390" "AT4G29440" "AT4G30280" "AT4G30640" "AT4G33925" "AT4G33930"
## [267] "AT4G34135" "AT4G34390" "AT4G35180" "AT4G36550" "AT4G36700" "AT4G37030" "AT4G37370"
## [274] "AT4G37390" "AT4G38550" "AT4G38552" "AT4G39030" "AT5G01040" "AT5G01050" "AT5G01640"
## [281] "AT5G01980" "AT5G02490" "AT5G02810" "AT5G04930" "AT5G06990" "AT5G07650" "AT5G08335"
## [288] "AT5G08790" "AT5G10390" "AT5G10440" "AT5G12930" "AT5G12940" "AT5G13190" "AT5G14760"
## [295] "AT5G17380" "AT5G17780" "AT5G18470" "AT5G20400" "AT5G20960" "AT5G22060" "AT5G22300"
## [302] "AT5G22530" "AT5G22630" "AT5G23160" "AT5G24205" "AT5G24206" "AT5G24910" "AT5G25250"
## [309] "AT5G25930" "AT5G27760" "AT5G38210" "AT5G38212" "AT5G38990" "AT5G39020" "AT5G39040"
## [316] "AT5G39680" "AT5G41180" "AT5G41730" "AT5G41880" "AT5G42380" "AT5G42440" "AT5G43910"
## [323] "AT5G44070" "AT5G44635" "AT5G45510" "AT5G46230" "AT5G47730" "AT5G51630" "AT5G51830"
## [330] "AT5G52020" "AT5G52570" "AT5G52640" "AT5G52720" "AT5G52810" "AT5G52910" "AT5G54470"
## [337] "AT5G54490" "AT5G54610" "AT5G54700" "AT5G54720" "AT5G54860" "AT5G55450" "AT5G56960"
## [344] "AT5G59720" "AT5G60280" "AT5G60900" "AT5G61900" "AT5G61910" "AT5G62180" "AT5G62770"
## [351] "AT5G64170" "AT5G64810" "AT5G64870" "AT5G66640" "AT5G66890" "AT5G67340" "ATCG00020"
## [358] "ATCG00120" "ATCG00130" "ATCG00140" "ATCG00270" "ATCG00280" "ATCG00330" "ATCG00340"
## [365] "ATCG00350" "ATCG00490" "ATCG00550" "ATCG00570" "ATCG00580" "ATCG00680" "ATCG00710"
## [372] "ATCG00720" "ATCG00730" "ATCG00890" "ATCG00920" "ATCG00930" "ATCG00940" "ATCG00950"
## [379] "ATCG01010" "ATCG01060" "ATCG01080" "ATCG01090" "ATCG01100" "ATCG01110" "ATCG01180"
## [386] "ATCG01190" "ATCG01200" "ATCG01210" "ATCG01250" "ATMG00020" "ATMG00060" "ATMG00280"
##
## $`M12-A12_up`
## [1] "AT1G01120" "AT1G01190" "AT1G01200" "AT1G01300" "AT1G01430" "AT1G01590" "AT1G01610"
## [8] "AT1G01620" "AT1G02640" "AT1G02650" "AT1G02700" "AT1G02710" "AT1G03300" "AT1G03600"
## [15] "AT1G03630" "AT1G03680" "AT1G03870" "AT1G04040" "AT1G04160" "AT1G04360" "AT1G04420"
## [22] "AT1G05310" "AT1G05420" "AT1G06160" "AT1G06240" "AT1G06250" "AT1G06260" "AT1G06265"
## [29] "AT1G06460" "AT1G06680" "AT1G06850" "AT1G07110" "AT1G07320" "AT1G07440" "AT1G07485"
## [36] "AT1G07490" "AT1G07880" "AT1G08090" "AT1G08160" "AT1G08300" "AT1G08810" "AT1G09340"
## [43] "AT1G09440" "AT1G09750" "AT1G10380" "AT1G10657" "AT1G10910" "AT1G10960" "AT1G11000"
## [50] "AT1G11130" "AT1G11545" "AT1G11670" "AT1G11720" "AT1G11860" "AT1G11925" "AT1G12060"
## [57] "AT1G12090" "AT1G12250" "AT1G12500" "AT1G12730" "AT1G12860" "AT1G12900" "AT1G13150"
## [64] "AT1G13250" "AT1G13380" "AT1G13650" "AT1G13790" "AT1G14030" "AT1G14150" "AT1G14160"
## [71] "AT1G14180" "AT1G14185" "AT1G14270" "AT1G14345" "AT1G14440" "AT1G14687" "AT1G14700"
## [78] "AT1G14720" "AT1G14900" "AT1G15000" "AT1G15080" "AT1G15125" "AT1G15160" "AT1G15180"
## [85] "AT1G15260" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15690" "AT1G15820" "AT1G15980"
## [92] "AT1G15990" "AT1G16080" "AT1G16410" "AT1G16720" "AT1G17100" "AT1G17200" "AT1G17650"
## [99] "AT1G17850" "AT1G18000" "AT1G18010" "AT1G18250" "AT1G18415" "AT1G18420" "AT1G18620"
## [106] "AT1G18650" "AT1G18735" "AT1G19150" "AT1G19220" "AT1G19350" "AT1G19450" "AT1G20010"
## [113] "AT1G20020" "AT1G20190" "AT1G20340" "AT1G20470" "AT1G20823" "AT1G21100" "AT1G21500"
## [120] "AT1G21680" "AT1G21880" "AT1G21910" "AT1G22330" "AT1G22370" "AT1G22550" "AT1G22590"
## [127] "AT1G22850" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205" "AT1G23340" "AT1G23470"
## [134] "AT1G23480" "AT1G23530" "AT1G23740" "AT1G23935" "AT1G23940" "AT1G24577" "AT1G25240"
## [141] "AT1G25450" "AT1G26150" "AT1G26230" "AT1G26250" "AT1G26761" "AT1G26810" "AT1G27020"
## [148] "AT1G27210" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G29090" "AT1G29430"
## [155] "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500" "AT1G29510" "AT1G29600" "AT1G29660"
## [162] "AT1G29670" "AT1G29680" "AT1G29790" "AT1G29910" "AT1G29920" "AT1G29930" "AT1G29980"
## [169] "AT1G30020" "AT1G30360" "AT1G30380" "AT1G30520" "AT1G30760" "AT1G30840" "AT1G31173"
## [176] "AT1G31330" "AT1G31710" "AT1G31835" "AT1G31950" "AT1G32060" "AT1G32080" "AT1G32200"
## [183] "AT1G32220" "AT1G32470" "AT1G32540" "AT1G32550" "AT1G32760" "AT1G32860" "AT1G32990"
## [190] "AT1G33240" "AT1G33440" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G35140" "AT1G35420"
## [197] "AT1G35680" "AT1G36675" "AT1G42970" "AT1G44575" "AT1G45163" "AT1G45165" "AT1G45545"
## [204] "AT1G46480" "AT1G47440" "AT1G47670" "AT1G48030" "AT1G49010" "AT1G49200" "AT1G49230"
## [211] "AT1G49320" "AT1G49380" "AT1G49650" "AT1G49730" "AT1G50450" "AT1G50732" "AT1G50900"
## [218] "AT1G50910" "AT1G51080" "AT1G51110" "AT1G51940" "AT1G52000" "AT1G52190" "AT1G52230"
## [225] "AT1G52240" "AT1G53230" "AT1G53233" "AT1G53250" "AT1G53300" "AT1G53700" "AT1G54730"
## [232] "AT1G54740" "AT1G54780" "AT1G54820" "AT1G55360" "AT1G55370" "AT1G55480" "AT1G55490"
## [239] "AT1G55670" "AT1G56210" "AT1G56430" "AT1G56500" "AT1G56710" "AT1G56720" "AT1G57943"
## [246] "AT1G58150" "AT1G58370" "AT1G59840" "AT1G60000" "AT1G60160" "AT1G60390" "AT1G60550"
## [253] "AT1G60590" "AT1G60600" "AT1G60690" "AT1G60700" "AT1G60800" "AT1G60950" "AT1G61240"
## [260] "AT1G61520" "AT1G61550" "AT1G61795" "AT1G62440" "AT1G62510" "AT1G62520" "AT1G62750"
## [267] "AT1G62760" "AT1G62975" "AT1G63040" "AT1G63120" "AT1G63400" "AT1G63480" "AT1G64150"
## [274] "AT1G64220" "AT1G64390" "AT1G64510" "AT1G64625" "AT1G64680" "AT1G64720" "AT1G64770"
## [281] "AT1G65230" "AT1G65590" "AT1G65860" "AT1G65900" "AT1G66100" "AT1G66130" "AT1G66140"
## [288] "AT1G66180" "AT1G66810" "AT1G66820" "AT1G67040" "AT1G67090" "AT1G67590" "AT1G67700"
## [295] "AT1G67740" "AT1G67750" "AT1G68010" "AT1G68190" "AT1G68238" "AT1G68400" "AT1G68520"
## [302] "AT1G68530" "AT1G68560" "AT1G68810" "AT1G68870" "AT1G68890" "AT1G68935" "AT1G68940"
## [309] "AT1G69140" "AT1G69530" "AT1G70280" "AT1G70370" "AT1G70410" "AT1G70430" "AT1G70460"
## [316] "AT1G70500" "AT1G70760" "AT1G70820" "AT1G70895" "AT1G70940" "AT1G71870" "AT1G72140"
## [323] "AT1G72270" "AT1G72310" "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G72810"
## [330] "AT1G73066" "AT1G73110" "AT1G73325" "AT1G73590" "AT1G73830" "AT1G74070" "AT1G74370"
## [337] "AT1G74470" "AT1G74670" "AT1G74730" "AT1G74875" "AT1G74940" "AT1G75250" "AT1G75360"
## [344] "AT1G75388" "AT1G75390" "AT1G75500" "AT1G75550" "AT1G75690" "AT1G75750" "AT1G75780"
## [351] "AT1G75800" "AT1G76610" "AT1G77131" "AT1G77210" "AT1G77400" "AT1G77490" "AT1G77630"
## [358] "AT1G78020" "AT1G78060" "AT1G78320" "AT1G78450" "AT1G78460" "AT1G78820" "AT1G78830"
## [365] "AT1G78860" "AT1G78970" "AT1G78995" "AT1G79060" "AT1G79760" "AT1G79770" "AT1G80030"
## [372] "AT1G80080" "AT1G80520" "AT1G80530" "AT1G80630" "AT1G80640" "AT1G80690" "AT2G01420"
## [379] "AT2G01590" "AT2G01630" "AT2G01760" "AT2G01990" "AT2G02020" "AT2G02780" "AT2G02950"
## [386] "AT2G02980" "AT2G03090" "AT2G03420" "AT2G03750" "AT2G04380" "AT2G04780" "AT2G04790"
## [393] "AT2G05070" "AT2G05160" "AT2G05790" "AT2G05914" "AT2G05995" "AT2G06850" "AT2G10940"
## [400] "AT2G12400" "AT2G13360" "AT2G13550" "AT2G13820" "AT2G14800" "AT2G14880" "AT2G14890"
## [407] "AT2G15090" "AT2G15440" "AT2G15880" "AT2G16270" "AT2G16630" "AT2G17230" "AT2G17740"
## [414] "AT2G17780" "AT2G18300" "AT2G18560" "AT2G18890" "AT2G18969" "AT2G18970" "AT2G19170"
## [421] "AT2G19620" "AT2G19930" "AT2G20180" "AT2G20210" "AT2G20290" "AT2G20340" "AT2G20680"
## [428] "AT2G20890" "AT2G21050" "AT2G21080" "AT2G21140" "AT2G21330" "AT2G21660" "AT2G21830"
## [435] "AT2G22810" "AT2G22890" "AT2G22980" "AT2G22990" "AT2G23100" "AT2G23130" "AT2G23590"
## [442] "AT2G23600" "AT2G24060" "AT2G24090" "AT2G24150" "AT2G24170" "AT2G24280" "AT2G24350"
## [449] "AT2G24580" "AT2G24610" "AT2G24762" "AT2G25270" "AT2G25470" "AT2G25790" "AT2G25840"
## [456] "AT2G25900" "AT2G26080" "AT2G26250" "AT2G26330" "AT2G26640" "AT2G26710" "AT2G26870"
## [463] "AT2G26900" "AT2G26910" "AT2G27040" "AT2G27060" "AT2G27130" "AT2G27190" "AT2G27385"
## [470] "AT2G27810" "AT2G28000" "AT2G28040" "AT2G28050" "AT2G28140" "AT2G28315" "AT2G28460"
## [477] "AT2G28790" "AT2G28810" "AT2G28870" "AT2G28930" "AT2G28950" "AT2G29050" "AT2G29290"
## [484] "AT2G29310" "AT2G29320" "AT2G29550" "AT2G29630" "AT2G30170" "AT2G30420" "AT2G30760"
## [491] "AT2G30766" "AT2G30790" "AT2G30820" "AT2G30830" "AT2G31170" "AT2G31790" "AT2G31902"
## [498] "AT2G32100" "AT2G32179" "AT2G32180" "AT2G32560" "AT2G32640" "AT2G33060" "AT2G33250"
## [505] "AT2G33330" "AT2G33570" "AT2G33735" "AT2G33860" "AT2G34060" "AT2G34170" "AT2G34180"
## [512] "AT2G34190" "AT2G34420" "AT2G34430" "AT2G34490" "AT2G34510" "AT2G34620" "AT2G34680"
## [519] "AT2G34930" "AT2G34980" "AT2G35130" "AT2G35190" "AT2G35260" "AT2G35500" "AT2G35590"
## [526] "AT2G35637" "AT2G35640" "AT2G35859" "AT2G35860" "AT2G35960" "AT2G36000" "AT2G36050"
## [533] "AT2G36110" "AT2G36200" "AT2G36570" "AT2G36815" "AT2G36830" "AT2G36990" "AT2G37090"
## [540] "AT2G37170" "AT2G37180" "AT2G37220" "AT2G37450" "AT2G37640" "AT2G37950" "AT2G38050"
## [547] "AT2G38080" "AT2G38120" "AT2G38170" "AT2G38210" "AT2G38460" "AT2G38530" "AT2G38540"
## [554] "AT2G39130" "AT2G39140" "AT2G39190" "AT2G39430" "AT2G39470" "AT2G39700" "AT2G39730"
## [561] "AT2G39870" "AT2G40008" "AT2G40480" "AT2G40540" "AT2G40610" "AT2G40690" "AT2G40815"
## [568] "AT2G41290" "AT2G41480" "AT2G41550" "AT2G41720" "AT2G41820" "AT2G41990" "AT2G42170"
## [575] "AT2G42290" "AT2G42300" "AT2G42320" "AT2G42380" "AT2G42870" "AT2G42940" "AT2G42980"
## [582] "AT2G43100" "AT2G43120" "AT2G43360" "AT2G43445" "AT2G44230" "AT2G44740" "AT2G44920"
## [589] "AT2G45050" "AT2G45180" "AT2G45340" "AT2G45470" "AT2G45560" "AT2G45850" "AT2G45870"
## [596] "AT2G45960" "AT2G46250" "AT2G46630" "AT2G46820" "AT2G47370" "AT2G47440" "AT2G47590"
## [603] "AT2G47840" "AT2G47930" "AT2G47940" "AT3G01060" "AT3G01440" "AT3G01480" "AT3G01490"
## [610] "AT3G01500" "AT3G01810" "AT3G02050" "AT3G02640" "AT3G02730" "AT3G03780" "AT3G03820"
## [617] "AT3G03980" "AT3G04140" "AT3G04160" "AT3G04550" "AT3G04960" "AT3G05190" "AT3G05620"
## [624] "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06145" "AT3G06160" "AT3G06433"
## [631] "AT3G06750" "AT3G06770" "AT3G07010" "AT3G07200" "AT3G07210" "AT3G07320" "AT3G07460"
## [638] "AT3G07540" "AT3G08030" "AT3G08600" "AT3G08920" "AT3G08940" "AT3G09035" "AT3G09160"
## [645] "AT3G09162" "AT3G09580" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10080" "AT3G10150"
## [652] "AT3G10160" "AT3G10200" "AT3G10340" "AT3G10840" "AT3G11110" "AT3G11700" "AT3G12110"
## [659] "AT3G12520" "AT3G12610" "AT3G12780" "AT3G13000" "AT3G13065" "AT3G13120" "AT3G13180"
## [666] "AT3G13240" "AT3G13470" "AT3G13510" "AT3G13750" "AT3G14210" "AT3G14240" "AT3G14310"
## [673] "AT3G14330" "AT3G14350" "AT3G14415" "AT3G14420" "AT3G15030" "AT3G15110" "AT3G15354"
## [680] "AT3G15530" "AT3G15570" "AT3G15680" "AT3G15720" "AT3G15800" "AT3G15850" "AT3G16180"
## [687] "AT3G16240" "AT3G16250" "AT3G16370" "AT3G16520" "AT3G16530" "AT3G16660" "AT3G16850"
## [694] "AT3G17350" "AT3G17640" "AT3G17830" "AT3G18050" "AT3G18080" "AT3G18090" "AT3G18110"
## [701] "AT3G18530" "AT3G18670" "AT3G18710" "AT3G18773" "AT3G18800" "AT3G18850" "AT3G18890"
## [708] "AT3G19002" "AT3G19120" "AT3G19480" "AT3G19710" "AT3G19850" "AT3G20015" "AT3G20260"
## [715] "AT3G20350" "AT3G20640" "AT3G20760" "AT3G20810" "AT3G20820" "AT3G21260" "AT3G21352"
## [722] "AT3G21460" "AT3G21870" "AT3G22120" "AT3G22121" "AT3G22142" "AT3G22150" "AT3G22790"
## [729] "AT3G22810" "AT3G23450" "AT3G23700" "AT3G23730" "AT3G23760" "AT3G23810" "AT3G23870"
## [736] "AT3G23880" "AT3G24255" "AT3G24400" "AT3G24430" "AT3G24480" "AT3G25130" "AT3G25410"
## [743] "AT3G25500" "AT3G25700" "AT3G25805" "AT3G25920" "AT3G26060" "AT3G26240" "AT3G26310"
## [750] "AT3G26320" "AT3G26445" "AT3G26510" "AT3G26520" "AT3G26570" "AT3G26650" "AT3G26932"
## [757] "AT3G27030" "AT3G27660" "AT3G27850" "AT3G27900" "AT3G28040" "AT3G28070" "AT3G28080"
## [764] "AT3G28130" "AT3G28200" "AT3G28860" "AT3G29185" "AT3G29320" "AT3G29670" "AT3G30720"
## [771] "AT3G42670" "AT3G43790" "AT3G44990" "AT3G45010" "AT3G45230" "AT3G45420" "AT3G45430"
## [778] "AT3G45940" "AT3G46130" "AT3G46370" "AT3G46550" "AT3G46580" "AT3G46780" "AT3G46900"
## [785] "AT3G46970" "AT3G47400" "AT3G48200" "AT3G48420" "AT3G48460" "AT3G48610" "AT3G48720"
## [792] "AT3G49260" "AT3G49290" "AT3G49670" "AT3G49740" "AT3G50120" "AT3G50220" "AT3G50240"
## [799] "AT3G50685" "AT3G50790" "AT3G50820" "AT3G50840" "AT3G50890" "AT3G51080" "AT3G51150"
## [806] "AT3G51420" "AT3G51470" "AT3G51480" "AT3G51510" "AT3G51820" "AT3G51910" "AT3G52150"
## [813] "AT3G52370" "AT3G52670" "AT3G52720" "AT3G52940" "AT3G52960" "AT3G53130" "AT3G53140"
## [820] "AT3G53190" "AT3G53420" "AT3G53460" "AT3G53800" "AT3G53950" "AT3G54050" "AT3G54400"
## [827] "AT3G54600" "AT3G54690" "AT3G54830" "AT3G54910" "AT3G54920" "AT3G55330" "AT3G55630"
## [834] "AT3G55800" "AT3G56160" "AT3G56370" "AT3G56650" "AT3G56940" "AT3G57180" "AT3G57830"
## [841] "AT3G58120" "AT3G58620" "AT3G58820" "AT3G59250" "AT3G59400" "AT3G59780" "AT3G59890"
## [848] "AT3G60070" "AT3G60320" "AT3G60370" "AT3G60530" "AT3G60630" "AT3G60750" "AT3G61160"
## [855] "AT3G61470" "AT3G61490" "AT3G61750" "AT3G61820" "AT3G61870" "AT3G61950" "AT3G62020"
## [862] "AT3G62070" "AT3G62550" "AT3G62690" "AT3G62750" "AT3G62910" "AT3G63110" "AT3G63140"
## [869] "AT3G63160" "AT3G63170" "AT3G63410" "AT3G63510" "AT4G00165" "AT4G00370" "AT4G00400"
## [876] "AT4G00950" "AT4G01130" "AT4G01310" "AT4G01330" "AT4G01440" "AT4G01460" "AT4G01670"
## [883] "AT4G02290" "AT4G02330" "AT4G02630" "AT4G02770" "AT4G03010" "AT4G03060" "AT4G03140"
## [890] "AT4G03190" "AT4G03210" "AT4G03280" "AT4G04330" "AT4G04340" "AT4G04350" "AT4G04450"
## [897] "AT4G04810" "AT4G07400" "AT4G07960" "AT4G09010" "AT4G09160" "AT4G09420" "AT4G09640"
## [904] "AT4G09650" "AT4G10120" "AT4G10340" "AT4G10800" "AT4G11290" "AT4G11450" "AT4G12030"
## [911] "AT4G12310" "AT4G12320" "AT4G12390" "AT4G12420" "AT4G12480" "AT4G12730" "AT4G12800"
## [918] "AT4G12830" "AT4G12900" "AT4G12917" "AT4G12970" "AT4G12980" "AT4G13260" "AT4G13340"
## [925] "AT4G13560" "AT4G13990" "AT4G14480" "AT4G14713" "AT4G14740" "AT4G14750" "AT4G14940"
## [932] "AT4G15210" "AT4G15510" "AT4G15810" "AT4G15960" "AT4G16140" "AT4G16141" "AT4G16370"
## [939] "AT4G16980" "AT4G17180" "AT4G17340" "AT4G17460" "AT4G17560" "AT4G17600" "AT4G17810"
## [946] "AT4G18197" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19170" "AT4G19380" "AT4G19530"
## [953] "AT4G20130" "AT4G20140" "AT4G20360" "AT4G20430" "AT4G20820" "AT4G20840" "AT4G21280"
## [960] "AT4G21870" "AT4G22120" "AT4G22690" "AT4G22890" "AT4G23000" "AT4G23290" "AT4G23740"
## [967] "AT4G23820" "AT4G23940" "AT4G24250" "AT4G24570" "AT4G24660" "AT4G24780" "AT4G24790"
## [974] "AT4G24810" "AT4G24930" "AT4G24972" "AT4G25050" "AT4G25080" "AT4G25100" "AT4G25200"
## [981] "AT4G25490" "AT4G25780" "AT4G25910" "AT4G25960" "AT4G25990" "AT4G26370" "AT4G26520"
## [988] "AT4G26530" "AT4G26540" "AT4G26542" "AT4G27030" "AT4G27440" "AT4G27720" "AT4G27730"
## [995] "AT4G27970" "AT4G27980" "AT4G28050" "AT4G28080" "AT4G28162" "AT4G28180"
## [ reached getOption("max.print") -- omitted 391 entries ]
##
## $`M12-V12_up`
## [1] "AT1G01190" "AT1G01430" "AT1G02640" "AT1G02650" "AT1G02710" "AT1G03130" "AT1G03300"
## [8] "AT1G03457" "AT1G03580" "AT1G03820" "AT1G03870" "AT1G04730" "AT1G04980" "AT1G05420"
## [15] "AT1G06160" "AT1G06760" "AT1G07300" "AT1G07880" "AT1G08300" "AT1G08380" "AT1G08560"
## [22] "AT1G08900" "AT1G09080" "AT1G09200" "AT1G09440" "AT1G09750" "AT1G10020" "AT1G10380"
## [29] "AT1G10657" "AT1G10910" "AT1G10930" "AT1G10990" "AT1G11000" "AT1G11350" "AT1G11380"
## [36] "AT1G12460" "AT1G12700" "AT1G12730" "AT1G12860" "AT1G13110" "AT1G13650" "AT1G13700"
## [43] "AT1G14070" "AT1G14180" "AT1G14185" "AT1G14440" "AT1G14642" "AT1G14700" "AT1G15125"
## [50] "AT1G15550" "AT1G15890" "AT1G15980" "AT1G15990" "AT1G16640" "AT1G17147" "AT1G17990"
## [57] "AT1G18000" "AT1G18010" "AT1G18020" "AT1G18090" "AT1G18415" "AT1G18420" "AT1G18550"
## [64] "AT1G18620" "AT1G18650" "AT1G19340" "AT1G19610" "AT1G19620" "AT1G20640" "AT1G21050"
## [71] "AT1G21120" "AT1G21130" "AT1G21326" "AT1G21580" "AT1G21910" "AT1G21920" "AT1G22330"
## [78] "AT1G22370" "AT1G22590" "AT1G22740" "AT1G23050" "AT1G23052" "AT1G23080" "AT1G23205"
## [85] "AT1G23390" "AT1G23470" "AT1G23480" "AT1G23750" "AT1G25440" "AT1G26150" "AT1G26420"
## [92] "AT1G26800" "AT1G27020" "AT1G27420" "AT1G27460" "AT1G27480" "AT1G28330" "AT1G28400"
## [99] "AT1G28660" "AT1G28670" "AT1G29430" "AT1G29440" "AT1G29450" "AT1G29460" "AT1G29500"
## [106] "AT1G29510" "AT1G29600" "AT1G29660" "AT1G29715" "AT1G30520" "AT1G30840" "AT1G31173"
## [113] "AT1G31355" "AT1G31820" "AT1G31835" "AT1G31920" "AT1G31950" "AT1G32740" "AT1G33055"
## [120] "AT1G33240" "AT1G33600" "AT1G33770" "AT1G33811" "AT1G34315" "AT1G35140" "AT1G36940"
## [127] "AT1G44900" "AT1G47890" "AT1G48260" "AT1G48480" "AT1G48780" "AT1G49010" "AT1G49200"
## [134] "AT1G49230" "AT1G50040" "AT1G50180" "AT1G50590" "AT1G50732" "AT1G51400" "AT1G51402"
## [141] "AT1G51850" "AT1G51920" "AT1G51940" "AT1G52190" "AT1G52230" "AT1G52750" "AT1G52800"
## [148] "AT1G53070" "AT1G53230" "AT1G53233" "AT1G53410" "AT1G54730" "AT1G54740" "AT1G54820"
## [155] "AT1G55330" "AT1G55370" "AT1G56220" "AT1G56720" "AT1G57943" "AT1G58225" "AT1G60390"
## [162] "AT1G60830" "AT1G60860" "AT1G61190" "AT1G61240" "AT1G61300" "AT1G61500" "AT1G61795"
## [169] "AT1G62520" "AT1G62790" "AT1G62910" "AT1G63080" "AT1G63260" "AT1G63400" "AT1G63530"
## [176] "AT1G63570" "AT1G63880" "AT1G64320" "AT1G64625" "AT1G65295" "AT1G65500" "AT1G65845"
## [183] "AT1G66180" "AT1G66810" "AT1G66920" "AT1G66940" "AT1G67590" "AT1G68190" "AT1G68520"
## [190] "AT1G68585" "AT1G68780" "AT1G68840" "AT1G68935" "AT1G68940" "AT1G69780" "AT1G70100"
## [197] "AT1G70940" "AT1G71030" "AT1G71970" "AT1G72060" "AT1G72070" "AT1G72270" "AT1G72416"
## [204] "AT1G72430" "AT1G72600" "AT1G72610" "AT1G72645" "AT1G73110" "AT1G73830" "AT1G73890"
## [211] "AT1G74670" "AT1G74930" "AT1G74940" "AT1G75090" "AT1G75120" "AT1G75150" "AT1G75250"
## [218] "AT1G75388" "AT1G75390" "AT1G75750" "AT1G76100" "AT1G76960" "AT1G77131" "AT1G77138"
## [225] "AT1G77210" "AT1G77510" "AT1G77640" "AT1G77990" "AT1G78000" "AT1G78265" "AT1G78270"
## [232] "AT1G78450" "AT1G78820" "AT1G78830" "AT1G78860" "AT1G79110" "AT1G79760" "AT1G79960"
## [239] "AT1G80630" "AT2G01420" "AT2G01630" "AT2G01860" "AT2G02020" "AT2G02780" "AT2G02950"
## [246] "AT2G02980" "AT2G03310" "AT2G03750" "AT2G05160" "AT2G05632" "AT2G05790" "AT2G06850"
## [253] "AT2G07680" "AT2G07690" "AT2G13550" "AT2G14050" "AT2G14660" "AT2G14890" "AT2G15880"
## [260] "AT2G15890" "AT2G17036" "AT2G17230" "AT2G17442" "AT2G17740" "AT2G17780" "AT2G17880"
## [267] "AT2G18300" "AT2G18560" "AT2G18890" "AT2G19310" "AT2G19330" "AT2G19930" "AT2G20170"
## [274] "AT2G20180" "AT2G20950" "AT2G22810" "AT2G22830" "AT2G22890" "AT2G23100" "AT2G23290"
## [281] "AT2G23600" "AT2G24170" "AT2G24280" "AT2G24350" "AT2G24610" "AT2G25200" "AT2G25470"
## [288] "AT2G25680" "AT2G25790" "AT2G25900" "AT2G26710" "AT2G26870" "AT2G28040" "AT2G28050"
## [295] "AT2G28120" "AT2G28460" "AT2G28720" "AT2G28740" "AT2G28870" "AT2G28950" "AT2G29290"
## [302] "AT2G29320" "AT2G29410" "AT2G30420" "AT2G30424" "AT2G30505" "AT2G30930" "AT2G31150"
## [309] "AT2G31751" "AT2G32100" "AT2G33020" "AT2G33050" "AT2G33051" "AT2G33060" "AT2G33480"
## [316] "AT2G33830" "AT2G34510" "AT2G34620" "AT2G35170" "AT2G35260" "AT2G35590" "AT2G36050"
## [323] "AT2G36200" "AT2G36400" "AT2G36970" "AT2G37450" "AT2G37950" "AT2G39180" "AT2G39430"
## [330] "AT2G39580" "AT2G39730" "AT2G40100" "AT2G40530" "AT2G40610" "AT2G40711" "AT2G40850"
## [337] "AT2G41250" "AT2G41550" "AT2G41820" "AT2G41940" "AT2G42040" "AT2G42170" "AT2G42300"
## [344] "AT2G42320" "AT2G42380" "AT2G42690" "AT2G42940" "AT2G42960" "AT2G43150" "AT2G43445"
## [351] "AT2G44370" "AT2G44380" "AT2G44630" "AT2G44740" "AT2G45180" "AT2G45830" "AT2G45850"
## [358] "AT2G47440" "AT2G47480" "AT2G47920" "AT2G47930" "AT3G01480" "AT3G01490" "AT3G02370"
## [365] "AT3G02640" "AT3G03820" "AT3G04160" "AT3G04300" "AT3G04720" "AT3G04960" "AT3G05320"
## [372] "AT3G05740" "AT3G05900" "AT3G05905" "AT3G06070" "AT3G06140" "AT3G06740" "AT3G07010"
## [379] "AT3G07210" "AT3G07460" "AT3G07540" "AT3G08600" "AT3G08940" "AT3G08970" "AT3G09160"
## [386] "AT3G09730" "AT3G09780" "AT3G09800" "AT3G10040" "AT3G10120" "AT3G10520" "AT3G10525"
## [393] "AT3G11110" "AT3G12110" "AT3G12150" "AT3G12170" "AT3G12610" "AT3G12820" "AT3G13000"
## [400] "AT3G13062" "AT3G13437" "AT3G14210" "AT3G14240" "AT3G14740" "AT3G15356" "AT3G15400"
## [407] "AT3G15450" "AT3G15570" "AT3G16175" "AT3G16250" "AT3G16520" "AT3G16530" "AT3G17160"
## [414] "AT3G18035" "AT3G18050" "AT3G18080" "AT3G18730" "AT3G18773" "AT3G19380" "AT3G19680"
## [421] "AT3G19850" "AT3G20015" "AT3G20200" "AT3G20350" "AT3G20820" "AT3G21060" "AT3G21500"
## [428] "AT3G22060" "AT3G22150" "AT3G22460" "AT3G22968" "AT3G22970" "AT3G23440" "AT3G23550"
## [435] "AT3G23730" "AT3G23740" "AT3G23880" "AT3G24760" "AT3G25130" "AT3G25500" "AT3G25717"
## [442] "AT3G26200" "AT3G26320" "AT3G26445" "AT3G26490" "AT3G26510" "AT3G26740" "AT3G26890"
## [449] "AT3G26932" "AT3G27060" "AT3G27360" "AT3G28040" "AT3G28070" "AT3G28860" "AT3G29035"
## [456] "AT3G29670" "AT3G29680" "AT3G30720" "AT3G42670" "AT3G44260" "AT3G45230" "AT3G45290"
## [463] "AT3G45330" "AT3G45850" "AT3G45940" "AT3G45980" "AT3G46320" "AT3G46550" "AT3G46580"
## [470] "AT3G48200" "AT3G48490" "AT3G48600" "AT3G49650" "AT3G50120" "AT3G50240" "AT3G50840"
## [477] "AT3G51220" "AT3G51740" "AT3G51910" "AT3G52070" "AT3G52072" "AT3G52630" "AT3G52720"
## [484] "AT3G53800" "AT3G54910" "AT3G55090" "AT3G55580" "AT3G56000" "AT3G56160" "AT3G58120"
## [491] "AT3G58620" "AT3G59120" "AT3G59250" "AT3G59550" "AT3G59780" "AT3G60320" "AT3G61820"
## [498] "AT3G62150" "AT3G62500" "AT3G62550" "AT3G62690" "AT3G62750" "AT4G00020" "AT4G00950"
## [505] "AT4G01330" "AT4G01460" "AT4G02060" "AT4G02075" "AT4G02110" "AT4G02330" "AT4G02540"
## [512] "AT4G02630" "AT4G02900" "AT4G03115" "AT4G03140" "AT4G03190" "AT4G03210" "AT4G05130"
## [519] "AT4G07400" "AT4G09160" "AT4G09430" "AT4G09432" "AT4G10120" "AT4G10380" "AT4G10600"
## [526] "AT4G11500" "AT4G12390" "AT4G12420" "AT4G12450" "AT4G12480" "AT4G12900" "AT4G12917"
## [533] "AT4G12980" "AT4G13100" "AT4G13340" "AT4G13493" "AT4G13494" "AT4G13495" "AT4G13560"
## [540] "AT4G13810" "AT4G14560" "AT4G14620" "AT4G14622" "AT4G14713" "AT4G14750" "AT4G14940"
## [547] "AT4G15540" "AT4G15810" "AT4G15960" "AT4G16141" "AT4G16370" "AT4G16563" "AT4G16980"
## [554] "AT4G17180" "AT4G17460" "AT4G17810" "AT4G18195" "AT4G18197" "AT4G18205" "AT4G18380"
## [561] "AT4G18540" "AT4G18670" "AT4G18760" "AT4G18970" "AT4G19090" "AT4G19170" "AT4G19370"
## [568] "AT4G19420" "AT4G19530" "AT4G19870" "AT4G20000" "AT4G20140" "AT4G20260" "AT4G20362"
## [575] "AT4G20430" "AT4G21445" "AT4G21870" "AT4G22560" "AT4G22690" "AT4G22710" "AT4G23290"
## [582] "AT4G23310" "AT4G23400" "AT4G24190" "AT4G24275" "AT4G24570" "AT4G26760" "AT4G27300"
## [589] "AT4G27440" "AT4G27730" "AT4G28160" "AT4G28162" "AT4G28310" "AT4G28350" "AT4G29310"
## [596] "AT4G30110" "AT4G30410" "AT4G31060" "AT4G31890" "AT4G32280" "AT4G32450" "AT4G32980"
## [603] "AT4G33000" "AT4G33010" "AT4G33560" "AT4G34220" "AT4G34760" "AT4G34770" "AT4G34790"
## [610] "AT4G34970" "AT4G34980" "AT4G35770" "AT4G36220" "AT4G36410" "AT4G36540" "AT4G36690"
## [617] "AT4G37800" "AT4G37925" "AT4G38080" "AT4G38400" "AT4G38700" "AT4G38840" "AT4G38860"
## [624] "AT4G38950" "AT4G39320" "AT5G01560" "AT5G01740" "AT5G01930" "AT5G02400" "AT5G02440"
## [631] "AT5G02540" "AT5G02760" "AT5G02890" "AT5G03120" "AT5G03150" "AT5G03552" "AT5G03830"
## [638] "AT5G04230" "AT5G05890" "AT5G06690" "AT5G07150" "AT5G07152" "AT5G07570" "AT5G07580"
## [645] "AT5G07590" "AT5G09730" "AT5G10150" "AT5G10250" "AT5G10260" "AT5G10530" "AT5G10690"
## [652] "AT5G10770" "AT5G11070" "AT5G11610" "AT5G11670" "AT5G12900" "AT5G13060" "AT5G13730"
## [659] "AT5G13990" "AT5G14350" "AT5G14920" "AT5G15350" "AT5G15580" "AT5G15770" "AT5G16000"
## [666] "AT5G16030" "AT5G16530" "AT5G18030" "AT5G18080" "AT5G18290" "AT5G18660" "AT5G19160"
## [673] "AT5G19190" "AT5G19810" "AT5G20410" "AT5G20450" "AT5G20635" "AT5G21222" "AT5G21930"
## [680] "AT5G22110" "AT5G22880" "AT5G22920" "AT5G22930" "AT5G23170" "AT5G23210" "AT5G23240"
## [687] "AT5G23280" "AT5G23480" "AT5G24000" "AT5G24010" "AT5G24490" "AT5G25130" "AT5G25190"
## [694] "AT5G25210" "AT5G25240" "AT5G25620" "AT5G25630" "AT5G26010" "AT5G27950" "AT5G28020"
## [701] "AT5G33280" "AT5G35732" "AT5G35750" "AT5G35790" "AT5G38140" "AT5G38410" "AT5G38420"
## [708] "AT5G38430" "AT5G39530" "AT5G39865" "AT5G40150" "AT5G41050" "AT5G41140" "AT5G41761"
## [715] "AT5G43700" "AT5G44020" "AT5G44130" "AT5G44260" "AT5G44600" "AT5G44635" "AT5G44650"
## [722] "AT5G44680" "AT5G45520" "AT5G45650" "AT5G45790" "AT5G46110" "AT5G46270" "AT5G46280"
## [729] "AT5G46440" "AT5G46690" "AT5G47220" "AT5G47230" "AT5G48320" "AT5G48360" "AT5G48670"
## [736] "AT5G48910" "AT5G49215" "AT5G49390" "AT5G49730" "AT5G49740" "AT5G50450" "AT5G51550"
## [743] "AT5G51560" "AT5G51590" "AT5G51670" "AT5G51790" "AT5G51970" "AT5G52100" "AT5G52280"
## [750] "AT5G52900" "AT5G52910" "AT5G53110" "AT5G53170" "AT5G54190" "AT5G54630" "AT5G54670"
## [757] "AT5G56100" "AT5G56220" "AT5G56580" "AT5G56840" "AT5G56850" "AT5G56870" "AT5G57550"
## [764] "AT5G57560" "AT5G57780" "AT5G58150" "AT5G58390" "AT5G59540" "AT5G59750" "AT5G59900"
## [771] "AT5G59970" "AT5G60100" "AT5G60490" "AT5G61000" "AT5G61160" "AT5G61590" "AT5G61660"
## [778] "AT5G62170" "AT5G62280" "AT5G62730" "AT5G63410" "AT5G63480" "AT5G63800" "AT5G64040"
## [785] "AT5G64120" "AT5G64330" "AT5G64410" "AT5G64630" "AT5G65350" "AT5G65360" "AT5G65600"
## [792] "AT5G65730" "AT5G66005" "AT5G66490" "AT5G66520" "AT5G66770" "AT5G66880" "AT5G67100"
##
## $`A12-V12_up`
## [1] "AT1G01370" "AT1G02220" "AT1G02310" "AT1G02360" "AT1G02470" "AT1G02920" "AT1G02930"
## [8] "AT1G03210" "AT1G03850" "AT1G04730" "AT1G04980" "AT1G04990" "AT1G07370" "AT1G08450"
## [15] "AT1G08630" "AT1G09080" "AT1G09200" "AT1G09420" "AT1G09500" "AT1G10070" "AT1G12290"
## [22] "AT1G13420" "AT1G13520" "AT1G14880" "AT1G15125" "AT1G15310" "AT1G15380" "AT1G15890"
## [29] "AT1G17020" "AT1G17147" "AT1G17460" "AT1G17990" "AT1G18020" "AT1G19020" "AT1G21120"
## [36] "AT1G21520" "AT1G21525" "AT1G21740" "AT1G25275" "AT1G26290" "AT1G26380" "AT1G26420"
## [43] "AT1G26800" "AT1G27330" "AT1G27350" "AT1G30420" "AT1G30860" "AT1G32210" "AT1G33030"
## [50] "AT1G33055" "AT1G33950" "AT1G33960" "AT1G35670" "AT1G36622" "AT1G44900" "AT1G47890"
## [57] "AT1G48260" "AT1G50520" "AT1G51850" "AT1G51860" "AT1G51920" "AT1G52200" "AT1G53110"
## [64] "AT1G53620" "AT1G55790" "AT1G56010" "AT1G56120" "AT1G58180" "AT1G58225" "AT1G58590"
## [71] "AT1G61160" "AT1G61810" "AT1G61820" "AT1G62790" "AT1G63460" "AT1G65470" "AT1G65486"
## [78] "AT1G65490" "AT1G65845" "AT1G66345" "AT1G66960" "AT1G67520" "AT1G67630" "AT1G67810"
## [85] "AT1G67980" "AT1G68585" "AT1G69490" "AT1G69543" "AT1G69720" "AT1G71970" "AT1G72060"
## [92] "AT1G72070" "AT1G74590" "AT1G75170" "AT1G75830" "AT1G76960" "AT1G77145" "AT1G77920"
## [99] "AT1G78260" "AT1G78290" "AT1G78380" "AT1G78780" "AT1G79450" "AT1G79960" "AT1G80460"
## [106] "AT2G01818" "AT2G02060" "AT2G02350" "AT2G02360" "AT2G02930" "AT2G04515" "AT2G07690"
## [113] "AT2G14560" "AT2G14610" "AT2G17040" "AT2G18660" "AT2G19190" "AT2G21185" "AT2G21187"
## [120] "AT2G23170" "AT2G23840" "AT2G24040" "AT2G24240" "AT2G24390" "AT2G25625" "AT2G26560"
## [127] "AT2G27389" "AT2G27390" "AT2G27660" "AT2G27920" "AT2G28110" "AT2G28740" "AT2G28940"
## [134] "AT2G29350" "AT2G29470" "AT2G29950" "AT2G30480" "AT2G31020" "AT2G31730" "AT2G31865"
## [141] "AT2G32160" "AT2G32460" "AT2G32680" "AT2G33480" "AT2G33520" "AT2G37750" "AT2G39320"
## [148] "AT2G40110" "AT2G40550" "AT2G40880" "AT2G41082" "AT2G41250" "AT2G41380" "AT2G41440"
## [155] "AT2G43000" "AT2G43150" "AT2G44370" "AT2G44380" "AT2G44980" "AT2G45510" "AT2G46380"
## [162] "AT3G02820" "AT3G03470" "AT3G03610" "AT3G03650" "AT3G04070" "AT3G04720" "AT3G05740"
## [169] "AT3G05870" "AT3G07580" "AT3G07600" "AT3G07800" "AT3G10320" "AT3G11000" "AT3G11090"
## [176] "AT3G12220" "AT3G12230" "AT3G13433" "AT3G13437" "AT3G13790" "AT3G14280" "AT3G14700"
## [183] "AT3G14740" "AT3G15518" "AT3G18250" "AT3G18730" "AT3G19390" "AT3G19615" "AT3G19660"
## [190] "AT3G20340" "AT3G21780" "AT3G22460" "AT3G23740" "AT3G26210" "AT3G26220" "AT3G26230"
## [197] "AT3G26440" "AT3G26470" "AT3G26500" "AT3G28540" "AT3G28570" "AT3G28850" "AT3G28950"
## [204] "AT3G29240" "AT3G44300" "AT3G44490" "AT3G45290" "AT3G45330" "AT3G45860" "AT3G45930"
## [211] "AT3G47830" "AT3G47836" "AT3G48490" "AT3G48630" "AT3G48640" "AT3G49110" "AT3G49130"
## [218] "AT3G49540" "AT3G50550" "AT3G51250" "AT3G51330" "AT3G51660" "AT3G51750" "AT3G51920"
## [225] "AT3G52630" "AT3G52748" "AT3G53150" "AT3G53235" "AT3G54150" "AT3G56500" "AT3G56870"
## [232] "AT3G56891" "AT3G57240" "AT3G57550" "AT3G59100" "AT3G60540" "AT3G61198" "AT3G61390"
## [239] "AT3G62590" "AT3G62600" "AT3G63030" "AT4G01230" "AT4G01500" "AT4G02050" "AT4G02060"
## [246] "AT4G02110" "AT4G02520" "AT4G04620" "AT4G04740" "AT4G08770" "AT4G09750" "AT4G10860"
## [253] "AT4G11070" "AT4G11300" "AT4G13900" "AT4G14020" "AT4G14800" "AT4G15530" "AT4G15610"
## [260] "AT4G17660" "AT4G18360" "AT4G19370" "AT4G19420" "AT4G19870" "AT4G20000" "AT4G21610"
## [267] "AT4G21730" "AT4G22520" "AT4G23260" "AT4G23271" "AT4G25000" "AT4G25070" "AT4G25900"
## [274] "AT4G27745" "AT4G28310" "AT4G28390" "AT4G28405" "AT4G30640" "AT4G32870" "AT4G33355"
## [281] "AT4G33925" "AT4G34060" "AT4G34135" "AT4G36710" "AT4G37310" "AT4G37390" "AT4G37520"
## [288] "AT4G38080" "AT4G39190" "AT4G39580" "AT5G01550" "AT5G01610" "AT5G02502" "AT5G02520"
## [295] "AT5G02690" "AT5G03285" "AT5G04180" "AT5G05270" "AT5G05300" "AT5G06310" "AT5G07650"
## [302] "AT5G07660" "AT5G07760" "AT5G07820" "AT5G07990" "AT5G08020" "AT5G08760" "AT5G09290"
## [309] "AT5G10390" "AT5G10400" "AT5G10440" "AT5G11920" "AT5G11950" "AT5G14420" "AT5G15860"
## [316] "AT5G15870" "AT5G17330" "AT5G20400" "AT5G20960" "AT5G22880" "AT5G23420" "AT5G24205"
## [323] "AT5G24206" "AT5G24230" "AT5G24910" "AT5G25450" "AT5G25451" "AT5G25910" "AT5G26731"
## [330] "AT5G28646" "AT5G37600" "AT5G37740" "AT5G38900" "AT5G39520" "AT5G39680" "AT5G39950"
## [337] "AT5G40010" "AT5G40240" "AT5G40690" "AT5G40720" "AT5G41160" "AT5G41880" "AT5G42530"
## [344] "AT5G42830" "AT5G43910" "AT5G44565" "AT5G44635" "AT5G45500" "AT5G46230" "AT5G46500"
## [351] "AT5G47220" "AT5G48180" "AT5G48290" "AT5G49690" "AT5G50460" "AT5G52720" "AT5G52910"
## [358] "AT5G52990" "AT5G53820" "AT5G54490" "AT5G54500" "AT5G54840" "AT5G55460" "AT5G56050"
## [365] "AT5G56120" "AT5G56870" "AT5G57010" "AT5G57550" "AT5G58840" "AT5G59530" "AT5G59662"
## [372] "AT5G59890" "AT5G60530" "AT5G61000" "AT5G61070" "AT5G61160" "AT5G61460" "AT5G61490"
## [379] "AT5G63135" "AT5G63240" "AT5G63550" "AT5G64000" "AT5G64190" "AT5G65350" "AT5G65360"
## [386] "AT5G66170" "AT5G67100" "AT5G67600"
##
## $`M1-A1_down`
## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740" "AT2G19190"
## [9] "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT4G12480" "AT4G18540" "AT4G23550" "AT4G33980"
## [17] "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250" "AT5G51790" "AT5G60100"
##
## $`M1-V1_down`
## [1] "AT1G01640" "AT1G02920" "AT1G02930" "AT1G03905" "AT1G04280" "AT1G04620" "AT1G04990"
## [8] "AT1G05020" "AT1G05300" "AT1G05710" "AT1G06460" "AT1G07040" "AT1G07050" "AT1G07160"
## [15] "AT1G07420" "AT1G08980" "AT1G10040" "AT1G10070" "AT1G10200" "AT1G10710" "AT1G10990"
## [22] "AT1G11200" "AT1G11362" "AT1G11925" "AT1G11950" "AT1G12710" "AT1G12730" "AT1G13110"
## [29] "AT1G13270" "AT1G14170" "AT1G14540" "AT1G14870" "AT1G15125" "AT1G15670" "AT1G15890"
## [36] "AT1G16090" "AT1G17665" "AT1G19130" "AT1G19370" "AT1G20010" "AT1G20620" "AT1G20630"
## [43] "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G22180" "AT1G22370"
## [50] "AT1G22480" "AT1G22490" "AT1G22770" "AT1G25320" "AT1G25390" "AT1G25480" "AT1G26380"
## [57] "AT1G26410" "AT1G26420" "AT1G26665" "AT1G27020" "AT1G27630" "AT1G28050" "AT1G28330"
## [64] "AT1G29160" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620" "AT1G30700" "AT1G30755"
## [71] "AT1G31690" "AT1G33030" "AT1G34380" "AT1G48200" "AT1G48210" "AT1G48370" "AT1G48605"
## [78] "AT1G49230" "AT1G49720" "AT1G51610" "AT1G51620" "AT1G51850" "AT1G51890" "AT1G51920"
## [85] "AT1G51940" "AT1G52200" "AT1G53035" "AT1G53100" "AT1G53625" "AT1G55450" "AT1G56140"
## [92] "AT1G56145" "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G59950" "AT1G60730"
## [99] "AT1G61360" "AT1G61420" "AT1G61550" "AT1G61560" "AT1G63180" "AT1G64110" "AT1G64760"
## [106] "AT1G65820" "AT1G66700" "AT1G66780" "AT1G67370" "AT1G67970" "AT1G67980" "AT1G68050"
## [113] "AT1G69520" "AT1G70220" "AT1G70800" "AT1G71000" "AT1G71400" "AT1G71520" "AT1G72330"
## [120] "AT1G72416" "AT1G74010" "AT1G75830" "AT1G76470" "AT1G76790" "AT1G77380" "AT1G77810"
## [127] "AT1G79440" "AT1G79460" "AT1G79680" "AT2G01540" "AT2G02010" "AT2G02100" "AT2G02220"
## [134] "AT2G02410" "AT2G02930" "AT2G05630" "AT2G05753" "AT2G14170" "AT2G15890" "AT2G16365"
## [141] "AT2G17740" "AT2G19190" "AT2G19450" "AT2G21130" "AT2G21660" "AT2G22450" "AT2G22970"
## [148] "AT2G22980" "AT2G23030" "AT2G23110" "AT2G24570" "AT2G24645" "AT2G25730" "AT2G25930"
## [155] "AT2G26560" "AT2G26650" "AT2G27200" "AT2G28190" "AT2G28930" "AT2G29720" "AT2G29740"
## [162] "AT2G30395" "AT2G30424" "AT2G30750" "AT2G30770" "AT2G31010" "AT2G33830" "AT2G35980"
## [169] "AT2G36390" "AT2G36815" "AT2G37430" "AT2G37940" "AT2G38465" "AT2G38860" "AT2G39200"
## [176] "AT2G39380" "AT2G39400" "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39900"
## [183] "AT2G39920" "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G42360" "AT2G43590"
## [190] "AT2G43620" "AT2G43940" "AT2G44080" "AT2G46940" "AT2G47390" "AT3G02800" "AT3G04420"
## [197] "AT3G05390" "AT3G07640" "AT3G07650" "AT3G09390" "AT3G09405" "AT3G10410" "AT3G11020"
## [204] "AT3G11230" "AT3G12030" "AT3G12220" "AT3G12230" "AT3G13450" "AT3G13700" "AT3G13710"
## [211] "AT3G14360" "AT3G15356" "AT3G15518" "AT3G15620" "AT3G16180" "AT3G16360" "AT3G16530"
## [218] "AT3G16565" "AT3G18080" "AT3G19210" "AT3G19260" "AT3G19615" "AT3G20410" "AT3G21240"
## [225] "AT3G21470" "AT3G22460" "AT3G23280" "AT3G26500" "AT3G26670" "AT3G26680" "AT3G26740"
## [232] "AT3G26830" "AT3G27210" "AT3G27300" "AT3G28370" "AT3G30720" "AT3G43670" "AT3G43790"
## [239] "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46440" "AT3G46640" "AT3G46690" "AT3G47360"
## [246] "AT3G47800" "AT3G47860" "AT3G48490" "AT3G49110" "AT3G49120" "AT3G49130" "AT3G50120"
## [253] "AT3G50210" "AT3G50480" "AT3G50500" "AT3G50810" "AT3G51330" "AT3G52450" "AT3G54150"
## [260] "AT3G55150" "AT3G55450" "AT3G56500" "AT3G57550" "AT3G57700" "AT3G58570" "AT3G59330"
## [267] "AT3G59350" "AT3G59700" "AT3G59900" "AT3G61160" "AT3G62150" "AT3G63160" "AT3G63380"
## [274] "AT4G01130" "AT4G01250" "AT4G01750" "AT4G02380" "AT4G02520" "AT4G03460" "AT4G04330"
## [281] "AT4G09020" "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12470" "AT4G12480" "AT4G14270"
## [288] "AT4G15233" "AT4G16146" "AT4G16820" "AT4G17140" "AT4G18430" "AT4G18540" "AT4G18800"
## [295] "AT4G19120" "AT4G19390" "AT4G19410" "AT4G19810" "AT4G19880" "AT4G20000" "AT4G22710"
## [302] "AT4G22770" "AT4G23280" "AT4G23550" "AT4G23810" "AT4G25810" "AT4G25900" "AT4G26270"
## [309] "AT4G26670" "AT4G27130" "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G29600"
## [316] "AT4G30690" "AT4G31050" "AT4G31550" "AT4G31620" "AT4G32340" "AT4G33160" "AT4G33980"
## [323] "AT4G33985" "AT4G34580" "AT4G34770" "AT4G34900" "AT4G34950" "AT4G34990" "AT4G35180"
## [330] "AT4G35380" "AT4G36760" "AT4G36770" "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410"
## [337] "AT4G38000" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G39230" "AT4G39270" "AT4G40070"
## [344] "AT5G02160" "AT5G02260" "AT5G02780" "AT5G03460" "AT5G05190" "AT5G05410" "AT5G06690"
## [351] "AT5G08380" "AT5G08490" "AT5G09500" "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150"
## [358] "AT5G11210" "AT5G11670" "AT5G12880" "AT5G12930" "AT5G14560" "AT5G15030" "AT5G15640"
## [365] "AT5G15840" "AT5G16380" "AT5G18470" "AT5G18525" "AT5G18540" "AT5G20950" "AT5G23235"
## [372] "AT5G23240" "AT5G23575" "AT5G23660" "AT5G24030" "AT5G24110" "AT5G24240" "AT5G24470"
## [379] "AT5G25340" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G33290"
## [386] "AT5G34780" "AT5G37740" "AT5G38895" "AT5G39410" "AT5G39580" "AT5G40240" "AT5G40760"
## [393] "AT5G41260" "AT5G42900" "AT5G44010" "AT5G44380" "AT5G44480" "AT5G44910" "AT5G46050"
## [400] "AT5G46600" "AT5G46860" "AT5G46871" "AT5G48250" "AT5G48430" "AT5G49015" "AT5G49900"
## [407] "AT5G50200" "AT5G51570" "AT5G51790" "AT5G53110" "AT5G54190" "AT5G54930" "AT5G54960"
## [414] "AT5G55050" "AT5G55090" "AT5G55530" "AT5G56580" "AT5G56960" "AT5G57110" "AT5G57220"
## [421] "AT5G57630" "AT5G57640" "AT5G58600" "AT5G58660" "AT5G59310" "AT5G59530" "AT5G59570"
## [428] "AT5G60100" "AT5G61160" "AT5G61380" "AT5G61520" "AT5G61560" "AT5G62200" "AT5G62720"
## [435] "AT5G62900" "AT5G63810" "AT5G64660" "AT5G64860" "AT5G64905" "AT5G65600" "AT5G65609"
## [442] "AT5G66052" "AT5G66053" "AT5G66790"
##
## $`A1-V1_down`
## [1] "AT1G04620" "AT1G07050" "AT1G17665" "AT1G68050" "AT2G25730" "AT2G40080" "AT3G07640" "AT3G07650"
## [9] "AT4G01130" "AT4G04330" "AT4G26670" "AT4G33980" "AT5G02150" "AT5G11150" "AT5G39410" "AT5G42900"
## [17] "AT5G48250" "AT5G57110" "AT5G59570" "AT5G60100" "AT5G61380"
##
## $`M6-A6_down`
## [1] "AT1G01010" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01560" "AT1G01660" "AT1G01680"
## [8] "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02270" "AT1G02310" "AT1G02390" "AT1G02450"
## [15] "AT1G02470" "AT1G02500" "AT1G02520" "AT1G02740" "AT1G02850" "AT1G02920" "AT1G02930"
## [22] "AT1G03050" "AT1G03495" "AT1G03660" "AT1G03940" "AT1G04310" "AT1G04490" "AT1G04600"
## [29] "AT1G04870" "AT1G05020" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05880"
## [36] "AT1G06148" "AT1G06180" "AT1G06360" "AT1G06620" "AT1G07000" "AT1G07430" "AT1G07500"
## [43] "AT1G07620" "AT1G07900" "AT1G08050" "AT1G08450" "AT1G08860" "AT1G09930" "AT1G09932"
## [50] "AT1G10040" "AT1G10280" "AT1G10340" "AT1G10417" "AT1G10990" "AT1G11330" "AT1G11905"
## [57] "AT1G12160" "AT1G12200" "AT1G12210" "AT1G12290" "AT1G12320" "AT1G12940" "AT1G13310"
## [64] "AT1G13330" "AT1G13340" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13540" "AT1G13550"
## [71] "AT1G13830" "AT1G14480" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15415" "AT1G15520"
## [78] "AT1G15790" "AT1G16090" "AT1G16150" "AT1G16300" "AT1G16420" "AT1G16670" "AT1G17170"
## [85] "AT1G17240" "AT1G17340" "AT1G17380" "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17744"
## [92] "AT1G17745" "AT1G17750" "AT1G17830" "AT1G18570" "AT1G18890" "AT1G18910" "AT1G19020"
## [99] "AT1G19250" "AT1G19540" "AT1G20310" "AT1G20460" "AT1G21240" "AT1G21250" "AT1G21310"
## [106] "AT1G21370" "AT1G21390" "AT1G21520" "AT1G21525" "AT1G21740" "AT1G22180" "AT1G22220"
## [113] "AT1G22400" "AT1G22403" "AT1G23200" "AT1G23710" "AT1G23840" "AT1G23850" "AT1G24095"
## [120] "AT1G24140" "AT1G24145" "AT1G24150" "AT1G25220" "AT1G25370" "AT1G26130" "AT1G26380"
## [127] "AT1G26390" "AT1G26410" "AT1G26420" "AT1G27110" "AT1G27770" "AT1G28370" "AT1G28480"
## [134] "AT1G29195" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30190" "AT1G30270"
## [141] "AT1G30420" "AT1G30620" "AT1G30814" "AT1G30850" "AT1G30900" "AT1G31010" "AT1G31290"
## [148] "AT1G31880" "AT1G32330" "AT1G32350" "AT1G32870" "AT1G32940" "AT1G32950" "AT1G32960"
## [155] "AT1G33030" "AT1G33110" "AT1G33420" "AT1G33430" "AT1G33560" "AT1G33720" "AT1G33730"
## [162] "AT1G33800" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G34750" "AT1G35210"
## [169] "AT1G35230" "AT1G35710" "AT1G35910" "AT1G36622" "AT1G37130" "AT1G42980" "AT1G43910"
## [176] "AT1G44130" "AT1G45145" "AT1G47210" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320"
## [183] "AT1G48370" "AT1G48605" "AT1G48870" "AT1G49050" "AT1G50400" "AT1G51640" "AT1G51645"
## [190] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51850" "AT1G51860" "AT1G51890" "AT1G51920"
## [197] "AT1G52315" "AT1G52540" "AT1G52565" "AT1G52855" "AT1G52890" "AT1G53100" "AT1G53620"
## [204] "AT1G53625" "AT1G54000" "AT1G54960" "AT1G55610" "AT1G55790" "AT1G56060" "AT1G56080"
## [211] "AT1G56165" "AT1G56470" "AT1G56540" "AT1G56550" "AT1G56600" "AT1G56660" "AT1G57560"
## [218] "AT1G57630" "AT1G57650" "AT1G58300" "AT1G59590" "AT1G59865" "AT1G60730" "AT1G61140"
## [225] "AT1G61160" "AT1G61215" "AT1G61250" "AT1G61260" "AT1G61340" "AT1G61370" "AT1G61415"
## [232] "AT1G61420" "AT1G61550" "AT1G61640" "AT1G61800" "AT1G61810" "AT1G62320" "AT1G62422"
## [239] "AT1G62580" "AT1G63245" "AT1G63720" "AT1G63750" "AT1G63820" "AT1G63840" "AT1G64065"
## [246] "AT1G64400" "AT1G64405" "AT1G64610" "AT1G65481" "AT1G65483" "AT1G65500" "AT1G65690"
## [253] "AT1G65870" "AT1G66090" "AT1G66250" "AT1G66390" "AT1G66460" "AT1G66550" "AT1G66590"
## [260] "AT1G66600" "AT1G66700" "AT1G66780" "AT1G66880" "AT1G66960" "AT1G67000" "AT1G67060"
## [267] "AT1G67070" "AT1G67360" "AT1G67520" "AT1G67630" "AT1G67635" "AT1G67650" "AT1G67800"
## [274] "AT1G67810" "AT1G67820" "AT1G67850" "AT1G67920" "AT1G67980" "AT1G68110" "AT1G68200"
## [281] "AT1G68250" "AT1G68390" "AT1G68620" "AT1G68690" "AT1G68700" "AT1G68710" "AT1G69260"
## [288] "AT1G69270" "AT1G69520" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69930" "AT1G70140"
## [295] "AT1G70170" "AT1G70690" "AT1G70990" "AT1G71390" "AT1G71690" "AT1G72000" "AT1G72220"
## [302] "AT1G72240" "AT1G72540" "AT1G72680" "AT1G72690" "AT1G72700" "AT1G72770" "AT1G72870"
## [309] "AT1G72890" "AT1G72900" "AT1G72920" "AT1G72940" "AT1G72950" "AT1G73010" "AT1G73130"
## [316] "AT1G73330" "AT1G73805" "AT1G73810" "AT1G73965" "AT1G74080" "AT1G74100" "AT1G74200"
## [323] "AT1G74350" "AT1G74360" "AT1G74590" "AT1G74710" "AT1G74750" "AT1G75040" "AT1G75060"
## [330] "AT1G75170" "AT1G75830" "AT1G76040" "AT1G76620" "AT1G76760" "AT1G76970" "AT1G76980"
## [337] "AT1G77500" "AT1G77660" "AT1G77760" "AT1G77810" "AT1G77890" "AT1G78190" "AT1G78380"
## [344] "AT1G78410" "AT1G78780" "AT1G79400" "AT1G79450" "AT1G79680" "AT1G80110" "AT1G80280"
## [351] "AT1G80300" "AT1G80450" "AT1G80590" "AT1G80610" "AT1G80830" "AT1G80840" "AT2G01180"
## [358] "AT2G01300" "AT2G01818" "AT2G02310" "AT2G02340" "AT2G02350" "AT2G02930" "AT2G03090"
## [365] "AT2G03505" "AT2G04040" "AT2G04050" "AT2G04070" "AT2G04400" "AT2G04430" "AT2G04450"
## [372] "AT2G04495" "AT2G04515" "AT2G05940" "AT2G07687" "AT2G12550" "AT2G13130" "AT2G13790"
## [379] "AT2G13810" "AT2G14290" "AT2G14610" "AT2G14620" "AT2G14878" "AT2G16060" "AT2G16720"
## [386] "AT2G16870" "AT2G16900" "AT2G17040" "AT2G17120" "AT2G17220" "AT2G17440" "AT2G17500"
## [393] "AT2G17720" "AT2G18000" "AT2G18193" "AT2G18650" "AT2G18660" "AT2G18690" "AT2G19190"
## [400] "AT2G19710" "AT2G20110" "AT2G20142" "AT2G20562" "AT2G21188" "AT2G21350" "AT2G21470"
## [407] "AT2G21510" "AT2G21550" "AT2G21780" "AT2G21790" "AT2G22200" "AT2G22470" "AT2G23680"
## [414] "AT2G23810" "AT2G24285" "AT2G24490" "AT2G24850" "AT2G25190" "AT2G25240" "AT2G25260"
## [421] "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25737" "AT2G26170" "AT2G26300" "AT2G26390"
## [428] "AT2G26400" "AT2G26480" "AT2G28160" "AT2G28210" "AT2G28400" "AT2G28570" "AT2G29100"
## [435] "AT2G29400" "AT2G29460" "AT2G29720" "AT2G29750" "AT2G29990" "AT2G30070" "AT2G30080"
## [442] "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018" "AT2G31020"
## [449] "AT2G31270" "AT2G31585" "AT2G31865" "AT2G31880" "AT2G31990" "AT2G32030" "AT2G32130"
## [456] "AT2G32140" "AT2G32150" "AT2G32190" "AT2G32200" "AT2G32210" "AT2G32430" "AT2G32460"
## [463] "AT2G32590" "AT2G32960" "AT2G33110" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580"
## [470] "AT2G34610" "AT2G34650" "AT2G34940" "AT2G35710" "AT2G35980" "AT2G36026" "AT2G36270"
## [477] "AT2G36580" "AT2G36670" "AT2G36690" "AT2G37070" "AT2G37100" "AT2G37260" "AT2G37440"
## [484] "AT2G37560" "AT2G37710" "AT2G37750" "AT2G37890" "AT2G37980" "AT2G38290" "AT2G38340"
## [491] "AT2G38490" "AT2G38500" "AT2G38690" "AT2G38790" "AT2G38860" "AT2G39110" "AT2G39220"
## [498] "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39435" "AT2G39520" "AT2G39530" "AT2G39650"
## [505] "AT2G40095" "AT2G40140" "AT2G40670" "AT2G40740" "AT2G41010" "AT2G41100" "AT2G41342"
## [512] "AT2G41380" "AT2G41410" "AT2G41660" "AT2G41835" "AT2G41880" "AT2G42060" "AT2G42350"
## [519] "AT2G42860" "AT2G42890" "AT2G42950" "AT2G43000" "AT2G43050" "AT2G43140" "AT2G43290"
## [526] "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43590" "AT2G43620" "AT2G43680" "AT2G44290"
## [533] "AT2G44578" "AT2G44600" "AT2G44910" "AT2G44940" "AT2G45120" "AT2G45220" "AT2G45400"
## [540] "AT2G45760" "AT2G45920" "AT2G46270" "AT2G46400" "AT2G46410" "AT2G46430" "AT2G46450"
## [547] "AT2G46620" "AT2G46680" "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47200" "AT2G47490"
## [554] "AT2G47670" "AT2G47720" "AT2G47730" "AT2G47800" "AT2G47820" "AT2G47950" "AT3G01290"
## [561] "AT3G01820" "AT3G01830" "AT3G01840" "AT3G02190" "AT3G02520" "AT3G02610" "AT3G02770"
## [568] "AT3G02800" "AT3G02820" "AT3G03310" "AT3G03440" "AT3G03450" "AT3G03610" "AT3G03700"
## [575] "AT3G03702" "AT3G03855" "AT3G04060" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04670"
## [582] "AT3G05330" "AT3G05360" "AT3G05500" "AT3G05650" "AT3G05830" "AT3G06490" "AT3G06890"
## [589] "AT3G07370" "AT3G07390" "AT3G07700" "AT3G07720" "AT3G08720" "AT3G08990" "AT3G09010"
## [596] "AT3G09032" "AT3G09280" "AT3G09405" "AT3G09450" "AT3G09480" "AT3G09520" "AT3G09790"
## [603] "AT3G09910" "AT3G09960" "AT3G10500" "AT3G10540" "AT3G10660" "AT3G10815" "AT3G10820"
## [610] "AT3G11000" "AT3G11010" "AT3G11080" "AT3G11220" "AT3G11340" "AT3G11420" "AT3G11600"
## [617] "AT3G11820" "AT3G11840" "AT3G12220" "AT3G12230" "AT3G12830" "AT3G12910" "AT3G13080"
## [624] "AT3G13090" "AT3G13100" "AT3G13380" "AT3G13433" "AT3G13610" "AT3G13782" "AT3G13900"
## [631] "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14460" "AT3G14470"
## [638] "AT3G14475" "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14710" "AT3G14840"
## [645] "AT3G14990" "AT3G15300" "AT3G15518" "AT3G15990" "AT3G16030" "AT3G16510" "AT3G16620"
## [652] "AT3G16800" "AT3G16980" "AT3G17240" "AT3G17280" "AT3G17420" "AT3G17520" "AT3G17609"
## [659] "AT3G17690" "AT3G17800" "AT3G18250" "AT3G19580" "AT3G19910" "AT3G19970" "AT3G20250"
## [666] "AT3G21080" "AT3G21140" "AT3G21150" "AT3G21220" "AT3G21240" "AT3G21320" "AT3G21520"
## [673] "AT3G21530" "AT3G21560" "AT3G21700" "AT3G22160" "AT3G22400" "AT3G22560" "AT3G22600"
## [680] "AT3G22910" "AT3G22930" "AT3G23110" "AT3G23120" "AT3G23240" "AT3G24900" "AT3G24927"
## [687] "AT3G25010" "AT3G25070" "AT3G25250" "AT3G25290" "AT3G25510" "AT3G25610" "AT3G25870"
## [694] "AT3G25882" "AT3G25890" "AT3G26210" "AT3G26440" "AT3G26470" "AT3G26680" "AT3G26690"
## [701] "AT3G26830" "AT3G26840" "AT3G27290" "AT3G27330" "AT3G27415" "AT3G27416" "AT3G27560"
## [708] "AT3G28007" "AT3G28340" "AT3G28510" "AT3G28540" "AT3G28570" "AT3G28580" "AT3G28840"
## [715] "AT3G28930" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G29590" "AT3G41979" "AT3G44300"
## [722] "AT3G44350" "AT3G44400" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G45040" "AT3G45330"
## [729] "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46510" "AT3G46520"
## [736] "AT3G46620" "AT3G47050" "AT3G47090" "AT3G47480" "AT3G47530" "AT3G47540" "AT3G47730"
## [743] "AT3G47780" "AT3G48020" "AT3G48080" "AT3G48090" "AT3G48100" "AT3G48240" "AT3G48490"
## [750] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48780" "AT3G48850" "AT3G49110" "AT3G49530"
## [757] "AT3G49540" "AT3G50280" "AT3G50470" "AT3G50480" "AT3G50760" "AT3G50770" "AT3G50800"
## [764] "AT3G50930" "AT3G51330" "AT3G51350" "AT3G51860" "AT3G52310" "AT3G52400" "AT3G52430"
## [771] "AT3G52460" "AT3G52470" "AT3G52540" "AT3G52630" "AT3G52870" "AT3G53120" "AT3G53150"
## [778] "AT3G53232" "AT3G53235" "AT3G53980" "AT3G54150" "AT3G54270" "AT3G54640" "AT3G55470"
## [785] "AT3G55500" "AT3G55730" "AT3G55880" "AT3G55950" "AT3G56170" "AT3G56275" "AT3G56400"
## [792] "AT3G56500" "AT3G56710" "AT3G56870" "AT3G56891" "AT3G57100" "AT3G57260" "AT3G57330"
## [799] "AT3G57380" "AT3G57460" "AT3G57630" "AT3G57880" "AT3G57950" "AT3G59010" "AT3G59150"
## [806] "AT3G59700" "AT3G59750" "AT3G60110" "AT3G60164" "AT3G60190" "AT3G60420" "AT3G60450"
## [813] "AT3G60470" "AT3G60520" "AT3G60800" "AT3G60966" "AT3G60970" "AT3G61190" "AT3G61198"
## [820] "AT3G61390" "AT3G61450" "AT3G61960" "AT3G62260" "AT3G62760" "AT3G63010" "AT3G63060"
## [827] "AT3G63380" "AT4G00700" "AT4G00820" "AT4G00850" "AT4G01010" "AT4G01200" "AT4G01360"
## [834] "AT4G01430" "AT4G01535" "AT4G01540" "AT4G01870" "AT4G01895" "AT4G01920" "AT4G01950"
## [841] "AT4G02220" "AT4G02280" "AT4G02360" "AT4G02380" "AT4G02420" "AT4G02520" "AT4G02550"
## [848] "AT4G02660" "AT4G02760" "AT4G03450" "AT4G03460" "AT4G04220" "AT4G04221" "AT4G04223"
## [855] "AT4G04490" "AT4G04500" "AT4G04510" "AT4G04540" "AT4G04620" "AT4G04920" "AT4G05020"
## [862] "AT4G05030" "AT4G05390" "AT4G08300" "AT4G08555" "AT4G08770" "AT4G09300" "AT4G09570"
## [869] "AT4G09770" "AT4G09820" "AT4G10380" "AT4G10390" "AT4G10500" "AT4G10860" "AT4G10955"
## [876] "AT4G10960" "AT4G11170" "AT4G11240" "AT4G11340" "AT4G11350" "AT4G11655" "AT4G11840"
## [883] "AT4G11850" "AT4G11890" "AT4G12120" "AT4G12490" "AT4G12500" "AT4G12720" "AT4G12735"
## [890] "AT4G13000" "AT4G13180" "AT4G13320" "AT4G13820" "AT4G13900" "AT4G13918" "AT4G13920"
## [897] "AT4G14090" "AT4G14220" "AT4G14365" "AT4G14368" "AT4G14370" "AT4G14630" "AT4G14690"
## [904] "AT4G15070" "AT4G15200" "AT4G15270" "AT4G15280" "AT4G15417" "AT4G15910" "AT4G16260"
## [911] "AT4G16350" "AT4G16600" "AT4G16820" "AT4G16960" "AT4G17250" "AT4G17660" "AT4G17670"
## [918] "AT4G17695" "AT4G18250" "AT4G18360" "AT4G18430" "AT4G18630" "AT4G19370" "AT4G19925"
## [925] "AT4G19970" "AT4G20000" "AT4G20110" "AT4G20460" "AT4G21400" "AT4G21500" "AT4G21610"
## [932] "AT4G21840" "AT4G21850" "AT4G21865" "AT4G21903" "AT4G21926" "AT4G21930" "AT4G22070"
## [939] "AT4G22520" "AT4G22530" "AT4G22590" "AT4G22592" "AT4G22880" "AT4G22980" "AT4G23030"
## [946] "AT4G23140" "AT4G23150" "AT4G23160" "AT4G23200" "AT4G23210" "AT4G23215" "AT4G23220"
## [953] "AT4G23250" "AT4G23280" "AT4G23300" "AT4G23310" "AT4G23320" "AT4G23450" "AT4G23470"
## [960] "AT4G23610" "AT4G23700" "AT4G24000" "AT4G24026" "AT4G24030" "AT4G24160" "AT4G25070"
## [967] "AT4G25390" "AT4G25880" "AT4G25900" "AT4G26060" "AT4G26120" "AT4G26270" "AT4G26400"
## [974] "AT4G26470" "AT4G26910" "AT4G26970" "AT4G26990" "AT4G27220" "AT4G27280" "AT4G27290"
## [981] "AT4G27480" "AT4G27745" "AT4G27830" "AT4G28390" "AT4G28490" "AT4G29440" "AT4G29740"
## [988] "AT4G29810" "AT4G29850" "AT4G30230" "AT4G30280" "AT4G30430" "AT4G30860" "AT4G31230"
## [995] "AT4G31500" "AT4G31860" "AT4G32870" "AT4G33040" "AT4G33050" "AT4G33300"
## [ reached getOption("max.print") -- omitted 343 entries ]
##
## $`M6-V6_down`
## [1] "AT1G01010" "AT1G01640" "AT1G01680" "AT1G01690" "AT1G02520" "AT1G03010" "AT1G03200"
## [8] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04600" "AT1G05100" "AT1G05840" "AT1G06620"
## [15] "AT1G07500" "AT1G07570" "AT1G08050" "AT1G09930" "AT1G09932" "AT1G10586" "AT1G11400"
## [22] "AT1G12160" "AT1G12380" "AT1G12540" "AT1G13150" "AT1G13310" "AT1G13330" "AT1G13340"
## [29] "AT1G13830" "AT1G14740" "AT1G15350" "AT1G17380" "AT1G17750" "AT1G17830" "AT1G18200"
## [36] "AT1G19180" "AT1G19394" "AT1G19540" "AT1G19640" "AT1G19650" "AT1G19680" "AT1G20310"
## [43] "AT1G20460" "AT1G21240" "AT1G21740" "AT1G22180" "AT1G22220" "AT1G23060" "AT1G23850"
## [50] "AT1G26730" "AT1G26770" "AT1G26930" "AT1G28130" "AT1G28370" "AT1G29640" "AT1G30100"
## [57] "AT1G30160" "AT1G30850" "AT1G31120" "AT1G31770" "AT1G31900" "AT1G32870" "AT1G33110"
## [64] "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420" "AT1G37130" "AT1G43160" "AT1G43245"
## [71] "AT1G43910" "AT1G44130" "AT1G47510" "AT1G47890" "AT1G48315" "AT1G48320" "AT1G48605"
## [78] "AT1G49520" "AT1G49530" "AT1G51760" "AT1G51780" "AT1G51860" "AT1G52030" "AT1G52565"
## [85] "AT1G52855" "AT1G52890" "AT1G53830" "AT1G54010" "AT1G54030" "AT1G54095" "AT1G55610"
## [92] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G58030" "AT1G59640" "AT1G60190" "AT1G60730"
## [99] "AT1G61110" "AT1G61120" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61550" "AT1G63840"
## [106] "AT1G65481" "AT1G65690" "AT1G65730" "AT1G65845" "AT1G65890" "AT1G66280" "AT1G66350"
## [113] "AT1G66960" "AT1G67420" "AT1G67635" "AT1G67820" "AT1G68110" "AT1G69260" "AT1G69360"
## [120] "AT1G69480" "AT1G69530" "AT1G70690" "AT1G70790" "AT1G71110" "AT1G71390" "AT1G72210"
## [127] "AT1G72410" "AT1G72540" "AT1G72700" "AT1G72770" "AT1G73130" "AT1G73210" "AT1G74100"
## [134] "AT1G74430" "AT1G74710" "AT1G75450" "AT1G75540" "AT1G75580" "AT1G76620" "AT1G76640"
## [141] "AT1G76980" "AT1G77280" "AT1G77760" "AT1G78290" "AT1G78780" "AT1G79270" "AT1G79310"
## [148] "AT1G80110" "AT1G80280" "AT1G80590" "AT1G80840" "AT2G01830" "AT2G02340" "AT2G04070"
## [155] "AT2G04430" "AT2G04450" "AT2G05940" "AT2G06255" "AT2G14610" "AT2G14620" "AT2G15760"
## [162] "AT2G16650" "AT2G16720" "AT2G17500" "AT2G18660" "AT2G20110" "AT2G20142" "AT2G21188"
## [169] "AT2G22200" "AT2G22330" "AT2G22760" "AT2G22770" "AT2G25690" "AT2G26300" "AT2G26390"
## [176] "AT2G26400" "AT2G26480" "AT2G27228" "AT2G27230" "AT2G27300" "AT2G28110" "AT2G28450"
## [183] "AT2G28570" "AT2G29100" "AT2G29750" "AT2G30020" "AT2G30070" "AT2G30540" "AT2G30770"
## [190] "AT2G30820" "AT2G30830" "AT2G31180" "AT2G32130" "AT2G32140" "AT2G32460" "AT2G32930"
## [197] "AT2G34010" "AT2G34070" "AT2G34080" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36640"
## [204] "AT2G37070" "AT2G37440" "AT2G37750" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490"
## [211] "AT2G38500" "AT2G38760" "AT2G38800" "AT2G39300" "AT2G39435" "AT2G39800" "AT2G40200"
## [218] "AT2G40460" "AT2G40670" "AT2G41070" "AT2G42060" "AT2G42760" "AT2G42890" "AT2G43000"
## [225] "AT2G43290" "AT2G43320" "AT2G43570" "AT2G43620" "AT2G43680" "AT2G44578" "AT2G44600"
## [232] "AT2G44840" "AT2G44940" "AT2G45245" "AT2G45760" "AT2G45920" "AT2G46040" "AT2G46400"
## [239] "AT2G46410" "AT2G46510" "AT2G46520" "AT2G46660" "AT2G46900" "AT2G46970" "AT2G47000"
## [246] "AT2G47420" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01770" "AT3G02210" "AT3G02885"
## [253] "AT3G02990" "AT3G03310" "AT3G03440" "AT3G04000" "AT3G04420" "AT3G05500" "AT3G06020"
## [260] "AT3G06490" "AT3G06890" "AT3G09600" "AT3G09960" "AT3G10815" "AT3G11210" "AT3G11450"
## [267] "AT3G11480" "AT3G12860" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13380" "AT3G13610"
## [274] "AT3G13730" "AT3G14440" "AT3G14680" "AT3G14700" "AT3G14870" "AT3G15536" "AT3G15950"
## [281] "AT3G16310" "AT3G16460" "AT3G16620" "AT3G17120" "AT3G17280" "AT3G17420" "AT3G17510"
## [288] "AT3G17690" "AT3G17860" "AT3G19100" "AT3G19970" "AT3G20250" "AT3G21080" "AT3G21320"
## [295] "AT3G21500" "AT3G21670" "AT3G21700" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G24518"
## [302] "AT3G24520" "AT3G25010" "AT3G25120" "AT3G25510" "AT3G25890" "AT3G26440" "AT3G26470"
## [309] "AT3G27170" "AT3G27415" "AT3G27416" "AT3G27809" "AT3G27810" "AT3G27870" "AT3G28510"
## [316] "AT3G28580" "AT3G43250" "AT3G44300" "AT3G44717" "AT3G46658" "AT3G46660" "AT3G47420"
## [323] "AT3G47480" "AT3G47730" "AT3G48090" "AT3G48100" "AT3G48115" "AT3G48520" "AT3G48580"
## [330] "AT3G48630" "AT3G48700" "AT3G48780" "AT3G50770" "AT3G50930" "AT3G51090" "AT3G51670"
## [337] "AT3G51860" "AT3G52430" "AT3G53210" "AT3G54320" "AT3G54366" "AT3G55060" "AT3G55500"
## [344] "AT3G55970" "AT3G56170" "AT3G56260" "AT3G57260" "AT3G57380" "AT3G57460" "AT3G57950"
## [351] "AT3G59750" "AT3G59930" "AT3G60420" "AT3G60470" "AT3G60490" "AT3G60961" "AT3G60966"
## [358] "AT3G61190" "AT3G61198" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61890" "AT3G61930"
## [365] "AT3G63010" "AT3G63380" "AT4G00700" "AT4G01430" "AT4G01535" "AT4G01540" "AT4G02360"
## [372] "AT4G02380" "AT4G02760" "AT4G03460" "AT4G04223" "AT4G04490" "AT4G04500" "AT4G04510"
## [379] "AT4G05010" "AT4G05020" "AT4G05100" "AT4G06744" "AT4G09770" "AT4G10390" "AT4G10500"
## [386] "AT4G11240" "AT4G11350" "AT4G11990" "AT4G12480" "AT4G12490" "AT4G12500" "AT4G12720"
## [393] "AT4G12735" "AT4G14630" "AT4G15280" "AT4G15417" "AT4G15430" "AT4G15780" "AT4G16260"
## [400] "AT4G16350" "AT4G17660" "AT4G17670" "AT4G17730" "AT4G20320" "AT4G21680" "AT4G21790"
## [407] "AT4G22070" "AT4G23150" "AT4G23300" "AT4G23310" "AT4G23420" "AT4G25390" "AT4G25433"
## [414] "AT4G26080" "AT4G26120" "AT4G26470" "AT4G27590" "AT4G27860" "AT4G27870" "AT4G29380"
## [421] "AT4G29740" "AT4G29930" "AT4G30180" "AT4G32920" "AT4G33150" "AT4G34200" "AT4G34650"
## [428] "AT4G35600" "AT4G35720" "AT4G36010" "AT4G36430" "AT4G36640" "AT4G36780" "AT4G36950"
## [435] "AT4G37850" "AT4G37900" "AT4G38560" "AT4G39030" "AT4G39190" "AT4G39950" "AT5G01840"
## [442] "AT5G01850" "AT5G02100" "AT5G02170" "AT5G03210" "AT5G03435" "AT5G03668" "AT5G03670"
## [449] "AT5G03680" "AT5G04860" "AT5G04950" "AT5G05680" "AT5G06110" "AT5G06610" "AT5G07650"
## [456] "AT5G08620" "AT5G10380" "AT5G11210" "AT5G11390" "AT5G11870" "AT5G13210" "AT5G13220"
## [463] "AT5G13320" "AT5G13820" "AT5G14090" "AT5G14390" "AT5G14700" "AT5G14760" "AT5G15190"
## [470] "AT5G16170" "AT5G16360" "AT5G17330" "AT5G17490" "AT5G17760" "AT5G19110" "AT5G20700"
## [477] "AT5G20960" "AT5G21280" "AT5G21950" "AT5G22540" "AT5G22545" "AT5G22630" "AT5G23160"
## [484] "AT5G23380" "AT5G23590" "AT5G24090" "AT5G24200" "AT5G24240" "AT5G24280" "AT5G24290"
## [491] "AT5G24910" "AT5G26170" "AT5G26270" "AT5G26920" "AT5G28919" "AT5G28920" "AT5G33355"
## [498] "AT5G38130" "AT5G38250" "AT5G38350" "AT5G39610" "AT5G39670" "AT5G40210" "AT5G41180"
## [505] "AT5G41315" "AT5G41610" "AT5G41612" "AT5G41730" "AT5G42050" "AT5G43170" "AT5G44350"
## [512] "AT5G44380" "AT5G44390" "AT5G44460" "AT5G44990" "AT5G45070" "AT5G45080" "AT5G45090"
## [519] "AT5G45110" "AT5G45630" "AT5G46410" "AT5G46840" "AT5G47960" "AT5G48400" "AT5G48410"
## [526] "AT5G49100" "AT5G49280" "AT5G49560" "AT5G51380" "AT5G52720" "AT5G52730" "AT5G52882"
## [533] "AT5G53290" "AT5G53360" "AT5G54240" "AT5G54700" "AT5G56050" "AT5G56880" "AT5G57320"
## [540] "AT5G58570" "AT5G58620" "AT5G59220" "AT5G59480" "AT5G59580" "AT5G59590" "AT5G59780"
## [547] "AT5G60310" "AT5G60800" "AT5G60890" "AT5G61900" "AT5G61960" "AT5G62150" "AT5G62190"
## [554] "AT5G62480" "AT5G62920" "AT5G63225" "AT5G63450" "AT5G64530" "AT5G64570" "AT5G64572"
## [561] "AT5G64700" "AT5G64810" "AT5G65280" "AT5G65380" "AT5G66052" "AT5G66053" "AT5G66170"
## [568] "AT5G66630" "AT5G66650" "AT5G67080" "AT5G67160" "AT5G67200"
##
## $`A6-V6_down`
## [1] "AT1G03020" "AT1G04240" "AT1G09950" "AT1G12240" "AT1G12540" "AT1G16370" "AT1G16400"
## [8] "AT1G16410" "AT1G19650" "AT1G19670" "AT1G25450" "AT1G26730" "AT1G26770" "AT1G26920"
## [15] "AT1G28010" "AT1G29280" "AT1G31770" "AT1G34210" "AT1G49520" "AT1G49530" "AT1G51780"
## [22] "AT1G54095" "AT1G63040" "AT1G63570" "AT1G65590" "AT1G66280" "AT1G69370" "AT1G69480"
## [29] "AT1G72140" "AT1G72180" "AT1G72450" "AT1G73210" "AT1G74430" "AT1G74950" "AT1G75540"
## [36] "AT2G01830" "AT2G02990" "AT2G03980" "AT2G06255" "AT2G22200" "AT2G22770" "AT2G22930"
## [43] "AT2G23760" "AT2G25130" "AT2G27228" "AT2G27230" "AT2G30540" "AT2G30820" "AT2G30830"
## [50] "AT2G34010" "AT2G34070" "AT2G35950" "AT2G36350" "AT2G36380" "AT2G36815" "AT2G36830"
## [57] "AT2G37180" "AT2G38400" "AT2G38750" "AT2G38760" "AT2G39250" "AT2G39800" "AT2G40460"
## [64] "AT2G42760" "AT2G47600" "AT2G47950" "AT3G01180" "AT3G02990" "AT3G06020" "AT3G11470"
## [71] "AT3G11480" "AT3G14870" "AT3G15720" "AT3G16460" "AT3G17510" "AT3G17860" "AT3G19100"
## [78] "AT3G21670" "AT3G23910" "AT3G27170" "AT3G27960" "AT3G43270" "AT3G47750" "AT3G48350"
## [85] "AT3G48520" "AT3G54820" "AT3G55290" "AT3G55970" "AT3G56260" "AT3G57780" "AT3G59710"
## [92] "AT3G61420" "AT3G61430" "AT3G61490" "AT3G61890" "AT3G62700" "AT4G03060" "AT4G03400"
## [99] "AT4G10060" "AT4G10390" "AT4G12030" "AT4G15430" "AT4G16740" "AT4G22200" "AT4G23420"
## [106] "AT4G25433" "AT4G25780" "AT4G27870" "AT4G32780" "AT4G36010" "AT4G37850" "AT5G01840"
## [113] "AT5G02260" "AT5G07690" "AT5G11160" "AT5G13220" "AT5G14090" "AT5G14700" "AT5G15190"
## [120] "AT5G17490" "AT5G19110" "AT5G21280" "AT5G24240" "AT5G24280" "AT5G24290" "AT5G26260"
## [127] "AT5G26270" "AT5G27350" "AT5G41120" "AT5G42650" "AT5G44350" "AT5G52120" "AT5G52882"
## [134] "AT5G53290" "AT5G54300" "AT5G57340" "AT5G57800" "AT5G60890" "AT5G61890" "AT5G62470"
## [141] "AT5G62920" "AT5G63450" "AT5G64750" "AT5G65280" "AT5G66052" "AT5G67150" "AT5G67160"
##
## $`M12-A12_down`
## [1] "AT1G01010" "AT1G01070" "AT1G01340" "AT1G01370" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01680" "AT1G01690" "AT1G02220" "AT1G02230" "AT1G02310" "AT1G02390" "AT1G02405"
## [15] "AT1G02450" "AT1G02470" "AT1G02520" "AT1G02660" "AT1G02750" "AT1G03050" "AT1G03180"
## [22] "AT1G03210" "AT1G03290" "AT1G03340" "AT1G03400" "AT1G03495" "AT1G03660" "AT1G03850"
## [29] "AT1G03990" "AT1G04310" "AT1G04490" "AT1G04500" "AT1G04570" "AT1G04600" "AT1G04780"
## [36] "AT1G05000" "AT1G05100" "AT1G05170" "AT1G05340" "AT1G05570" "AT1G05680" "AT1G05835"
## [43] "AT1G05880" "AT1G06180" "AT1G06620" "AT1G06660" "AT1G07000" "AT1G07020" "AT1G07430"
## [50] "AT1G07476" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07620" "AT1G07630"
## [57] "AT1G08050" "AT1G08630" "AT1G08860" "AT1G08920" "AT1G08940" "AT1G09090" "AT1G09240"
## [64] "AT1G09350" "AT1G09500" "AT1G09560" "AT1G09630" "AT1G09794" "AT1G09930" "AT1G09932"
## [71] "AT1G10070" "AT1G10140" "AT1G10340" "AT1G10410" "AT1G10417" "AT1G10520" "AT1G10585"
## [78] "AT1G10690" "AT1G10710" "AT1G11100" "AT1G11330" "AT1G11362" "AT1G11400" "AT1G11480"
## [85] "AT1G11785" "AT1G11905" "AT1G12320" "AT1G12540" "AT1G13310" "AT1G13330" "AT1G13340"
## [92] "AT1G13420" "AT1G13470" "AT1G13480" "AT1G13520" "AT1G13550" "AT1G13990" "AT1G14260"
## [99] "AT1G14330" "AT1G14540" "AT1G14870" "AT1G14880" "AT1G15010" "AT1G15040" "AT1G15380"
## [106] "AT1G15405" "AT1G15415" "AT1G15520" "AT1G15670" "AT1G15790" "AT1G15800" "AT1G16150"
## [113] "AT1G16300" "AT1G16420" "AT1G16500" "AT1G16670" "AT1G17020" "AT1G17380" "AT1G17490"
## [120] "AT1G17500" "AT1G17600" "AT1G17615" "AT1G17745" "AT1G17750" "AT1G18570" "AT1G18890"
## [127] "AT1G19020" "AT1G19160" "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19250" "AT1G19270"
## [134] "AT1G19490" "AT1G19640" "AT1G20310" "AT1G20740" "AT1G20780" "AT1G21000" "AT1G21200"
## [141] "AT1G21210" "AT1G21240" "AT1G21250" "AT1G21370" "AT1G21390" "AT1G21400" "AT1G21520"
## [148] "AT1G21525" "AT1G21740" "AT1G21930" "AT1G22180" "AT1G22220" "AT1G22280" "AT1G22400"
## [155] "AT1G22403" "AT1G22410" "AT1G22470" "AT1G22480" "AT1G22510" "AT1G22840" "AT1G22985"
## [162] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23560" "AT1G23840" "AT1G23850"
## [169] "AT1G24140" "AT1G24145" "AT1G24147" "AT1G24150" "AT1G25400" "AT1G26130" "AT1G26200"
## [176] "AT1G26290" "AT1G26330" "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26690" "AT1G26762"
## [183] "AT1G26930" "AT1G27110" "AT1G27300" "AT1G27980" "AT1G28190" "AT1G28360" "AT1G28370"
## [190] "AT1G28480" "AT1G29195" "AT1G29240" "AT1G29290" "AT1G29640" "AT1G30040" "AT1G30135"
## [197] "AT1G30220" "AT1G30270" "AT1G30280" "AT1G30473" "AT1G30620" "AT1G30700" "AT1G30755"
## [204] "AT1G30814" "AT1G30850" "AT1G30900" "AT1G30935" "AT1G31010" "AT1G31290" "AT1G31540"
## [211] "AT1G31550" "AT1G31900" "AT1G32210" "AT1G32350" "AT1G32560" "AT1G32870" "AT1G32910"
## [218] "AT1G32920" "AT1G32940" "AT1G32950" "AT1G32960" "AT1G33030" "AT1G33420" "AT1G33430"
## [225] "AT1G33560" "AT1G33720" "AT1G33730" "AT1G33950" "AT1G33960" "AT1G34180" "AT1G34420"
## [232] "AT1G34750" "AT1G35210" "AT1G35230" "AT1G35580" "AT1G35710" "AT1G35910" "AT1G36622"
## [239] "AT1G42980" "AT1G43160" "AT1G43310" "AT1G43910" "AT1G44130" "AT1G45145" "AT1G47056"
## [246] "AT1G47510" "AT1G48000" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G48605" "AT1G48870"
## [253] "AT1G49050" "AT1G49450" "AT1G49900" "AT1G50420" "AT1G50560" "AT1G50740" "AT1G51130"
## [260] "AT1G51660" "AT1G51670" "AT1G51760" "AT1G51780" "AT1G51790" "AT1G51800" "AT1G51860"
## [267] "AT1G51890" "AT1G52200" "AT1G52290" "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52855"
## [274] "AT1G52890" "AT1G53030" "AT1G53100" "AT1G53620" "AT1G53625" "AT1G53830" "AT1G53920"
## [281] "AT1G54100" "AT1G54130" "AT1G54570" "AT1G54575" "AT1G54890" "AT1G55610" "AT1G55790"
## [288] "AT1G56120" "AT1G56240" "AT1G56242" "AT1G56470" "AT1G56550" "AT1G56650" "AT1G56660"
## [295] "AT1G57560" "AT1G57630" "AT1G57650" "AT1G57990" "AT1G59590" "AT1G59640" "AT1G59740"
## [302] "AT1G59950" "AT1G60190" "AT1G60420" "AT1G60610" "AT1G60730" "AT1G60890" "AT1G61065"
## [309] "AT1G61140" "AT1G61160" "AT1G61215" "AT1G61260" "AT1G61340" "AT1G61415" "AT1G61420"
## [316] "AT1G61560" "AT1G61800" "AT1G61810" "AT1G61820" "AT1G62300" "AT1G62422" "AT1G62570"
## [323] "AT1G62580" "AT1G62840" "AT1G63245" "AT1G63440" "AT1G63460" "AT1G63720" "AT1G63740"
## [330] "AT1G63820" "AT1G63840" "AT1G64065" "AT1G64610" "AT1G64660" "AT1G65483" "AT1G65490"
## [337] "AT1G65610" "AT1G65690" "AT1G66040" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66410"
## [344] "AT1G66550" "AT1G66570" "AT1G66580" "AT1G66590" "AT1G66600" "AT1G66725" "AT1G66880"
## [351] "AT1G66960" "AT1G67000" "AT1G67060" "AT1G67070" "AT1G67190" "AT1G67195" "AT1G67360"
## [358] "AT1G67520" "AT1G67635" "AT1G67650" "AT1G67800" "AT1G67810" "AT1G67850" "AT1G67856"
## [365] "AT1G67970" "AT1G67980" "AT1G68200" "AT1G68250" "AT1G68390" "AT1G68440" "AT1G68620"
## [372] "AT1G68700" "AT1G68710" "AT1G68740" "AT1G68820" "AT1G69050" "AT1G69260" "AT1G69480"
## [379] "AT1G69490" "AT1G69520" "AT1G69610" "AT1G69720" "AT1G69790" "AT1G69840" "AT1G69880"
## [386] "AT1G69930" "AT1G70220" "AT1G70480" "AT1G70640" "AT1G70690" "AT1G70810" "AT1G71100"
## [393] "AT1G71520" "AT1G71690" "AT1G71697" "AT1G71910" "AT1G72000" "AT1G72120" "AT1G72125"
## [400] "AT1G72220" "AT1G72240" "AT1G72330" "AT1G72420" "AT1G72540" "AT1G72680" "AT1G72690"
## [407] "AT1G72700" "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940"
## [414] "AT1G72950" "AT1G73010" "AT1G73260" "AT1G73550" "AT1G73805" "AT1G73810" "AT1G73965"
## [421] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74360" "AT1G74710" "AT1G75170" "AT1G75510"
## [428] "AT1G75830" "AT1G76040" "AT1G76062" "AT1G76070" "AT1G76240" "AT1G76470" "AT1G76590"
## [435] "AT1G76650" "AT1G76760" "AT1G76970" "AT1G76980" "AT1G77000" "AT1G77145" "AT1G77280"
## [442] "AT1G77500" "AT1G77765" "AT1G77885" "AT1G77890" "AT1G77920" "AT1G78190" "AT1G78260"
## [449] "AT1G78340" "AT1G78380" "AT1G78410" "AT1G78570" "AT1G78780" "AT1G79400" "AT1G79450"
## [456] "AT1G79680" "AT1G79900" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [463] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80840" "AT2G01010" "AT2G01340" "AT2G01540"
## [470] "AT2G01650" "AT2G01818" "AT2G02060" "AT2G02061" "AT2G02310" "AT2G02340" "AT2G02350"
## [477] "AT2G02390" "AT2G02870" "AT2G03270" "AT2G03760" "AT2G04040" "AT2G04070" "AT2G04100"
## [484] "AT2G04400" "AT2G04430" "AT2G04450" "AT2G04495" "AT2G04515" "AT2G04900" "AT2G05320"
## [491] "AT2G05630" "AT2G05910" "AT2G05940" "AT2G06255" "AT2G07687" "AT2G07688" "AT2G07732"
## [498] "AT2G13790" "AT2G13810" "AT2G13960" "AT2G14290" "AT2G14560" "AT2G14610" "AT2G14620"
## [505] "AT2G15400" "AT2G15760" "AT2G15860" "AT2G16060" "AT2G16367" "AT2G16530" "AT2G16700"
## [512] "AT2G16710" "AT2G16720" "AT2G16870" "AT2G17040" "AT2G17130" "AT2G17220" "AT2G17500"
## [519] "AT2G17720" "AT2G18000" "AT2G18660" "AT2G18690" "AT2G19190" "AT2G19690" "AT2G19710"
## [526] "AT2G19800" "AT2G20110" "AT2G20142" "AT2G20825" "AT2G21188" "AT2G21350" "AT2G21470"
## [533] "AT2G21510" "AT2G21780" "AT2G21850" "AT2G22200" "AT2G22500" "AT2G22560" "AT2G22760"
## [540] "AT2G22770" "AT2G23030" "AT2G23110" "AT2G23170" "AT2G23320" "AT2G23450" "AT2G23680"
## [547] "AT2G23790" "AT2G23810" "AT2G24040" "AT2G24240" "AT2G24285" "AT2G24850" "AT2G25130"
## [554] "AT2G25190" "AT2G25240" "AT2G25260" "AT2G25440" "AT2G25460" "AT2G25520" "AT2G25625"
## [561] "AT2G25737" "AT2G26190" "AT2G26290" "AT2G26300" "AT2G26400" "AT2G26480" "AT2G26530"
## [568] "AT2G26560" "AT2G26750" "AT2G27389" "AT2G27390" "AT2G27430" "AT2G27510" "AT2G27690"
## [575] "AT2G27830" "AT2G27920" "AT2G28110" "AT2G28160" "AT2G28400" "AT2G28500" "AT2G28570"
## [582] "AT2G28890" "AT2G29070" "AT2G29110" "AT2G29350" "AT2G29400" "AT2G29460" "AT2G29470"
## [589] "AT2G29480" "AT2G29680" "AT2G29720" "AT2G29750" "AT2G29950" "AT2G29990" "AT2G30080"
## [596] "AT2G30140" "AT2G30395" "AT2G30400" "AT2G30550" "AT2G30750" "AT2G30770" "AT2G31018"
## [603] "AT2G31020" "AT2G31200" "AT2G31305" "AT2G31390" "AT2G31570" "AT2G31865" "AT2G31870"
## [610] "AT2G31880" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32160" "AT2G32190"
## [617] "AT2G32210" "AT2G32460" "AT2G32510" "AT2G32660" "AT2G32670" "AT2G32680" "AT2G33380"
## [624] "AT2G33520" "AT2G33580" "AT2G34070" "AT2G34500" "AT2G34580" "AT2G34600" "AT2G34610"
## [631] "AT2G34940" "AT2G35000" "AT2G35070" "AT2G35290" "AT2G35550" "AT2G35730" "AT2G35810"
## [638] "AT2G35940" "AT2G35950" "AT2G36640" "AT2G36854" "AT2G37070" "AT2G37110" "AT2G37440"
## [645] "AT2G37670" "AT2G37750" "AT2G37760" "AT2G37870" "AT2G37980" "AT2G38240" "AT2G38250"
## [652] "AT2G38340" "AT2G38490" "AT2G38790" "AT2G38860" "AT2G39030" "AT2G39050" "AT2G39110"
## [659] "AT2G39210" "AT2G39230" "AT2G39320" "AT2G39350" "AT2G39420" "AT2G39518" "AT2G39520"
## [666] "AT2G39530" "AT2G40095" "AT2G40113" "AT2G40140" "AT2G40330" "AT2G40340" "AT2G40435"
## [673] "AT2G40750" "AT2G41070" "AT2G41090" "AT2G41100" "AT2G41200" "AT2G41342" "AT2G41380"
## [680] "AT2G41410" "AT2G41660" "AT2G41835" "AT2G42060" "AT2G42350" "AT2G42560" "AT2G42950"
## [687] "AT2G43000" "AT2G43040" "AT2G43140" "AT2G43320" "AT2G43570" "AT2G43580" "AT2G43820"
## [694] "AT2G44180" "AT2G44383" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G45170" "AT2G45210"
## [701] "AT2G45220" "AT2G45330" "AT2G45500" "AT2G45570" "AT2G45660" "AT2G45695" "AT2G45760"
## [708] "AT2G45770" "AT2G46040" "AT2G46270" "AT2G46380" "AT2G46400" "AT2G46430" "AT2G46440"
## [715] "AT2G46510" "AT2G46620" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46940" "AT2G46980"
## [722] "AT2G47000" "AT2G47130" "AT2G47140" "AT2G47190" "AT2G47200" "AT2G47560" "AT2G47640"
## [729] "AT2G47720" "AT2G47770" "AT2G47820" "AT2G47950" "AT3G01080" "AT3G01290" "AT3G01830"
## [736] "AT3G01840" "AT3G01970" "AT3G02140" "AT3G02150" "AT3G02160" "AT3G02190" "AT3G02770"
## [743] "AT3G02800" "AT3G03310" "AT3G03341" "AT3G03440" "AT3G03450" "AT3G03460" "AT3G03470"
## [750] "AT3G03490" "AT3G03560" "AT3G03610" "AT3G03650" "AT3G03700" "AT3G03702" "AT3G04000"
## [757] "AT3G04060" "AT3G04070" "AT3G04181" "AT3G04220" "AT3G04420" "AT3G04620" "AT3G04640"
## [764] "AT3G05330" "AT3G05360" "AT3G05390" "AT3G05500" "AT3G05830" "AT3G05870" "AT3G06320"
## [771] "AT3G06420" "AT3G06490" "AT3G06500" "AT3G06890" "AT3G07195" "AT3G07370" "AT3G07600"
## [778] "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720" "AT3G08760" "AT3G08870" "AT3G08990"
## [785] "AT3G09270" "AT3G09280" "AT3G09490" "AT3G09830" "AT3G09910" "AT3G09940" "AT3G09960"
## [792] "AT3G10010" "AT3G10310" "AT3G10320" "AT3G10420" "AT3G10490" "AT3G10500" "AT3G10640"
## [799] "AT3G10815" "AT3G11000" "AT3G11010" "AT3G11040" "AT3G11080" "AT3G11150" "AT3G11330"
## [806] "AT3G11340" "AT3G11480" "AT3G11580" "AT3G11820" "AT3G11840" "AT3G12040" "AT3G12220"
## [813] "AT3G12230" "AT3G12320" "AT3G12510" "AT3G12760" "AT3G12830" "AT3G13080" "AT3G13090"
## [820] "AT3G13100" "AT3G13235" "AT3G13380" "AT3G13430" "AT3G13432" "AT3G13520" "AT3G13610"
## [827] "AT3G13730" "AT3G13782" "AT3G13900" "AT3G13910" "AT3G13950" "AT3G14050" "AT3G14060"
## [834] "AT3G14130" "AT3G14280" "AT3G14430" "AT3G14440" "AT3G14470" "AT3G14475" "AT3G14560"
## [841] "AT3G14590" "AT3G14610" "AT3G14680" "AT3G14700" "AT3G14840" "AT3G15355" "AT3G15500"
## [848] "AT3G15518" "AT3G15534" "AT3G15536" "AT3G15760" "AT3G15770" "AT3G16150" "AT3G16330"
## [855] "AT3G16565" "AT3G16980" "AT3G16990" "AT3G17000" "AT3G17380" "AT3G17420" "AT3G17609"
## [862] "AT3G17690" "AT3G17790" "AT3G17800" "AT3G17810" "AT3G17820" "AT3G18240" "AT3G18250"
## [869] "AT3G18260" "AT3G18560" "AT3G19010" "AT3G19270" "AT3G19390" "AT3G19580" "AT3G19615"
## [876] "AT3G19660" "AT3G19910" "AT3G19970" "AT3G20340" "AT3G21080" "AT3G21150" "AT3G21230"
## [883] "AT3G21295" "AT3G21320" "AT3G21520" "AT3G21700" "AT3G21810" "AT3G22160" "AT3G22235"
## [890] "AT3G22370" "AT3G22400" "AT3G22560" "AT3G22600" "AT3G22840" "AT3G22910" "AT3G22961"
## [897] "AT3G23120" "AT3G23240" "AT3G24320" "AT3G24460" "AT3G25010" "AT3G25020" "AT3G25250"
## [904] "AT3G25290" "AT3G25400" "AT3G25510" "AT3G25870" "AT3G25882" "AT3G26090" "AT3G26210"
## [911] "AT3G26220" "AT3G26440" "AT3G26460" "AT3G26470" "AT3G26500" "AT3G26600" "AT3G26690"
## [918] "AT3G26830" "AT3G26840" "AT3G27210" "AT3G27290" "AT3G27415" "AT3G27416" "AT3G27809"
## [925] "AT3G27810" "AT3G28007" "AT3G28210" "AT3G28340" "AT3G28480" "AT3G28510" "AT3G28540"
## [932] "AT3G28570" "AT3G28580" "AT3G28600" "AT3G28850" "AT3G28890" "AT3G28930" "AT3G29240"
## [939] "AT3G29250" "AT3G29575" "AT3G30775" "AT3G41768" "AT3G43250" "AT3G44300" "AT3G44326"
## [946] "AT3G44350" "AT3G44400" "AT3G44490" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [953] "AT3G45130" "AT3G45410" "AT3G45620" "AT3G45638" "AT3G46080" "AT3G46090" "AT3G46280"
## [960] "AT3G46510" "AT3G46658" "AT3G46660" "AT3G46690" "AT3G46930" "AT3G47090" "AT3G47340"
## [967] "AT3G47480" "AT3G47490" "AT3G47530" "AT3G47540" "AT3G47780" "AT3G48020" "AT3G48080"
## [974] "AT3G48090" "AT3G48240" "AT3G48390" "AT3G48490" "AT3G48520" "AT3G48570" "AT3G48580"
## [981] "AT3G48630" "AT3G48640" "AT3G48650" "AT3G48700" "AT3G48770" "AT3G48850" "AT3G49110"
## [988] "AT3G49120" "AT3G49130" "AT3G49540" "AT3G49580" "AT3G49645" "AT3G50260" "AT3G50280"
## [995] "AT3G50310" "AT3G50470" "AT3G50480" "AT3G50550" "AT3G50760" "AT3G50770"
## [ reached getOption("max.print") -- omitted 812 entries ]
##
## $`M12-V12_down`
## [1] "AT1G01010" "AT1G01030" "AT1G01340" "AT1G01470" "AT1G01480" "AT1G01520" "AT1G01560"
## [8] "AT1G01600" "AT1G01680" "AT1G01720" "AT1G01900" "AT1G02205" "AT1G02220" "AT1G02230"
## [15] "AT1G02400" "AT1G02405" "AT1G02450" "AT1G02460" "AT1G02750" "AT1G03050" "AT1G04310"
## [22] "AT1G04490" "AT1G04570" "AT1G04700" "AT1G04780" "AT1G05100" "AT1G05680" "AT1G05690"
## [29] "AT1G05710" "AT1G05880" "AT1G06000" "AT1G06002" "AT1G06180" "AT1G06570" "AT1G06620"
## [36] "AT1G07150" "AT1G07430" "AT1G07500" "AT1G07590" "AT1G07600" "AT1G07610" "AT1G07670"
## [43] "AT1G08050" "AT1G08860" "AT1G08920" "AT1G09180" "AT1G09240" "AT1G09350" "AT1G09530"
## [50] "AT1G09950" "AT1G10230" "AT1G10340" "AT1G10410" "AT1G10530" "AT1G10560" "AT1G10585"
## [57] "AT1G10586" "AT1G10690" "AT1G10710" "AT1G10770" "AT1G11185" "AT1G11400" "AT1G11480"
## [64] "AT1G11785" "AT1G12320" "AT1G12420" "AT1G12540" "AT1G13280" "AT1G13310" "AT1G13330"
## [71] "AT1G13340" "AT1G13740" "AT1G13920" "AT1G13930" "AT1G13990" "AT1G14120" "AT1G14260"
## [78] "AT1G15010" "AT1G15100" "AT1G15110" "AT1G15150" "AT1G15405" "AT1G15415" "AT1G15420"
## [85] "AT1G15430" "AT1G15520" "AT1G15670" "AT1G16300" "AT1G16850" "AT1G17380" "AT1G17420"
## [92] "AT1G17500" "AT1G17550" "AT1G17600" "AT1G17750" "AT1G17830" "AT1G17940" "AT1G19160"
## [99] "AT1G19180" "AT1G19200" "AT1G19230" "AT1G19270" "AT1G19490" "AT1G19570" "AT1G19640"
## [106] "AT1G19650" "AT1G19670" "AT1G19680" "AT1G20030" "AT1G20065" "AT1G20070" "AT1G20310"
## [113] "AT1G20440" "AT1G20450" "AT1G20970" "AT1G21000" "AT1G21410" "AT1G21520" "AT1G21525"
## [120] "AT1G21550" "AT1G22220" "AT1G22400" "AT1G22470" "AT1G22480" "AT1G22490" "AT1G22770"
## [127] "AT1G23040" "AT1G23120" "AT1G23200" "AT1G23550" "AT1G23850" "AT1G24090" "AT1G24145"
## [134] "AT1G24147" "AT1G24210" "AT1G24600" "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500"
## [141] "AT1G26660" "AT1G26730" "AT1G26762" "AT1G26770" "AT1G26920" "AT1G26930" "AT1G26960"
## [148] "AT1G27110" "AT1G27300" "AT1G27720" "AT1G27730" "AT1G27760" "AT1G28010" "AT1G28050"
## [155] "AT1G28360" "AT1G28370" "AT1G28480" "AT1G29050" "AT1G29195" "AT1G29290" "AT1G29330"
## [162] "AT1G29640" "AT1G30040" "AT1G30100" "AT1G30135" "AT1G30240" "AT1G30260" "AT1G30320"
## [169] "AT1G30620" "AT1G30814" "AT1G30850" "AT1G31120" "AT1G31290" "AT1G31550" "AT1G31900"
## [176] "AT1G32560" "AT1G32640" "AT1G32730" "AT1G32870" "AT1G32910" "AT1G32960" "AT1G33110"
## [183] "AT1G33260" "AT1G34180" "AT1G34420" "AT1G35210" "AT1G42980" "AT1G43160" "AT1G43245"
## [190] "AT1G43710" "AT1G43910" "AT1G44170" "AT1G44350" "AT1G45145" "AT1G47510" "AT1G48000"
## [197] "AT1G48100" "AT1G48315" "AT1G48320" "AT1G48370" "AT1G49050" "AT1G49450" "AT1G49520"
## [204] "AT1G50260" "AT1G50640" "AT1G51140" "AT1G51660" "AT1G51760" "AT1G51780" "AT1G52030"
## [211] "AT1G52315" "AT1G52565" "AT1G52690" "AT1G52710" "AT1G52720" "AT1G52760" "AT1G52770"
## [218] "AT1G52827" "AT1G52855" "AT1G52890" "AT1G52905" "AT1G53320" "AT1G53470" "AT1G53560"
## [225] "AT1G53620" "AT1G53625" "AT1G53760" "AT1G53830" "AT1G54030" "AT1G54095" "AT1G54100"
## [232] "AT1G54120" "AT1G54130" "AT1G54570" "AT1G54890" "AT1G55610" "AT1G56580" "AT1G57560"
## [239] "AT1G57610" "AT1G57630" "AT1G57650" "AT1G58270" "AT1G58360" "AT1G59640" "AT1G59740"
## [246] "AT1G59950" "AT1G60190" "AT1G60270" "AT1G61065" "AT1G61110" "AT1G61120" "AT1G61140"
## [253] "AT1G61215" "AT1G61255" "AT1G61260" "AT1G61340" "AT1G61610" "AT1G61640" "AT1G61890"
## [260] "AT1G62840" "AT1G63245" "AT1G63720" "AT1G64380" "AT1G64610" "AT1G64620" "AT1G64660"
## [267] "AT1G64670" "AT1G65610" "AT1G66090" "AT1G66170" "AT1G66280" "AT1G66550" "AT1G66590"
## [274] "AT1G66600" "AT1G66725" "AT1G66760" "AT1G66780" "AT1G67070" "AT1G67420" "AT1G68200"
## [281] "AT1G68250" "AT1G68340" "AT1G68350" "AT1G68390" "AT1G68500" "AT1G68620" "AT1G69260"
## [288] "AT1G69360" "AT1G69480" "AT1G69600" "AT1G69610" "AT1G69790" "AT1G69840" "AT1G69870"
## [295] "AT1G69930" "AT1G70220" "AT1G70300" "AT1G70590" "AT1G70640" "AT1G70690" "AT1G70700"
## [302] "AT1G70800" "AT1G70810" "AT1G71100" "AT1G71690" "AT1G71697" "AT1G72120" "AT1G72210"
## [309] "AT1G72240" "AT1G72330" "AT1G72450" "AT1G72520" "AT1G72680" "AT1G72690" "AT1G72700"
## [316] "AT1G72770" "AT1G72890" "AT1G72900" "AT1G72910" "AT1G72920" "AT1G72940" "AT1G73010"
## [323] "AT1G73390" "AT1G73480" "AT1G73500" "AT1G73690" "AT1G73805" "AT1G73810" "AT1G73965"
## [330] "AT1G74080" "AT1G74100" "AT1G74200" "AT1G74710" "AT1G74950" "AT1G75020" "AT1G75220"
## [337] "AT1G75370" "AT1G75400" "AT1G75440" "AT1G75450" "AT1G75580" "AT1G76040" "AT1G76062"
## [344] "AT1G76070" "AT1G76180" "AT1G76240" "AT1G76380" "AT1G76590" "AT1G76640" "AT1G76650"
## [351] "AT1G76760" "AT1G76790" "AT1G76980" "AT1G77200" "AT1G77280" "AT1G77450" "AT1G77500"
## [358] "AT1G77680" "AT1G77760" "AT1G77885" "AT1G77890" "AT1G78070" "AT1G78080" "AT1G78190"
## [365] "AT1G78210" "AT1G78380" "AT1G78570" "AT1G78940" "AT1G79170" "AT1G79270" "AT1G79400"
## [372] "AT1G79520" "AT1G79570" "AT1G80110" "AT1G80120" "AT1G80160" "AT1G80300" "AT1G80450"
## [379] "AT1G80580" "AT1G80590" "AT1G80610" "AT1G80820" "AT1G80840" "AT1G80850" "AT2G01340"
## [386] "AT2G01450" "AT2G01890" "AT2G02310" "AT2G02340" "AT2G02870" "AT2G03470" "AT2G03760"
## [393] "AT2G03980" "AT2G04070" "AT2G04100" "AT2G04450" "AT2G05260" "AT2G05940" "AT2G06050"
## [400] "AT2G06255" "AT2G13650" "AT2G13960" "AT2G14290" "AT2G15760" "AT2G16720" "AT2G17500"
## [407] "AT2G17720" "AT2G18090" "AT2G18196" "AT2G18690" "AT2G18917" "AT2G20110" "AT2G20142"
## [414] "AT2G20825" "AT2G20880" "AT2G21188" "AT2G21350" "AT2G21640" "AT2G21780" "AT2G22200"
## [421] "AT2G22330" "AT2G22500" "AT2G22760" "AT2G22770" "AT2G22860" "AT2G23030" "AT2G23110"
## [428] "AT2G23340" "AT2G23450" "AT2G23760" "AT2G23810" "AT2G24210" "AT2G24285" "AT2G24850"
## [435] "AT2G25130" "AT2G25240" "AT2G25460" "AT2G25625" "AT2G26480" "AT2G26530" "AT2G27310"
## [442] "AT2G27500" "AT2G27505" "AT2G27510" "AT2G27690" "AT2G27830" "AT2G28200" "AT2G28400"
## [449] "AT2G28570" "AT2G29440" "AT2G29450" "AT2G29460" "AT2G29470" "AT2G29670" "AT2G30020"
## [456] "AT2G30040" "AT2G30140" "AT2G30360" "AT2G30362" "AT2G30395" "AT2G30400" "AT2G30540"
## [463] "AT2G30550" "AT2G30720" "AT2G30750" "AT2G30820" "AT2G30830" "AT2G31180" "AT2G31380"
## [470] "AT2G31940" "AT2G31945" "AT2G32130" "AT2G32140" "AT2G32150" "AT2G32210" "AT2G32235"
## [477] "AT2G32240" "AT2G32510" "AT2G32930" "AT2G32990" "AT2G33380" "AT2G34010" "AT2G34070"
## [484] "AT2G34080" "AT2G34500" "AT2G34600" "AT2G34810" "AT2G35290" "AT2G35550" "AT2G35700"
## [491] "AT2G35710" "AT2G35730" "AT2G35940" "AT2G35945" "AT2G35950" "AT2G36080" "AT2G36380"
## [498] "AT2G36590" "AT2G36640" "AT2G36815" "AT2G36830" "AT2G36854" "AT2G37040" "AT2G37170"
## [505] "AT2G37180" "AT2G37440" "AT2G37590" "AT2G37750" "AT2G37760" "AT2G37770" "AT2G37870"
## [512] "AT2G37980" "AT2G38240" "AT2G38250" "AT2G38400" "AT2G38490" "AT2G38500" "AT2G38530"
## [519] "AT2G38640" "AT2G38750" "AT2G38760" "AT2G39030" "AT2G39050" "AT2G39210" "AT2G39250"
## [526] "AT2G39350" "AT2G39520" "AT2G39725" "AT2G39800" "AT2G39980" "AT2G40140" "AT2G40340"
## [533] "AT2G40435" "AT2G40620" "AT2G40750" "AT2G41070" "AT2G41410" "AT2G41540" "AT2G41660"
## [540] "AT2G41730" "AT2G41835" "AT2G41870" "AT2G42150" "AT2G42350" "AT2G42530" "AT2G42540"
## [547] "AT2G42560" "AT2G42760" "AT2G43018" "AT2G43020" "AT2G43140" "AT2G43320" "AT2G43535"
## [554] "AT2G43550" "AT2G44450" "AT2G44578" "AT2G44600" "AT2G44810" "AT2G44840" "AT2G44940"
## [561] "AT2G45210" "AT2G45760" "AT2G46040" "AT2G46270" "AT2G46370" "AT2G46400" "AT2G46510"
## [568] "AT2G46520" "AT2G46670" "AT2G46680" "AT2G46790" "AT2G46830" "AT2G46940" "AT2G47000"
## [575] "AT2G47140" "AT2G47180" "AT2G47200" "AT2G47260" "AT2G47560" "AT2G47670" "AT2G47770"
## [582] "AT2G47780" "AT2G47950" "AT3G01280" "AT3G01290" "AT3G01830" "AT3G01840" "AT3G02140"
## [589] "AT3G02150" "AT3G02160" "AT3G02510" "AT3G02875" "AT3G02990" "AT3G03310" "AT3G03440"
## [596] "AT3G03650" "AT3G03950" "AT3G04000" "AT3G04010" "AT3G04060" "AT3G04181" "AT3G04420"
## [603] "AT3G04630" "AT3G05330" "AT3G05380" "AT3G05390" "AT3G05500" "AT3G05640" "AT3G05800"
## [610] "AT3G05810" "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06420" "AT3G06490" "AT3G06500"
## [617] "AT3G06890" "AT3G07340" "AT3G07350" "AT3G07700" "AT3G07720" "AT3G07870" "AT3G08720"
## [624] "AT3G08990" "AT3G09032" "AT3G09280" "AT3G09370" "AT3G09450" "AT3G09830" "AT3G09910"
## [631] "AT3G09940" "AT3G10815" "AT3G10985" "AT3G11150" "AT3G11170" "AT3G11210" "AT3G11330"
## [638] "AT3G11340" "AT3G11410" "AT3G11420" "AT3G11450" "AT3G11470" "AT3G11480" "AT3G11580"
## [645] "AT3G11840" "AT3G12320" "AT3G12830" "AT3G12920" "AT3G13080" "AT3G13100" "AT3G13432"
## [652] "AT3G13610" "AT3G13730" "AT3G13910" "AT3G14050" "AT3G14060" "AT3G14440" "AT3G14560"
## [659] "AT3G14840" "AT3G14870" "AT3G15210" "AT3G15500" "AT3G15534" "AT3G15760" "AT3G15990"
## [666] "AT3G16150" "AT3G16320" "AT3G16330" "AT3G16400" "AT3G16450" "AT3G16460" "AT3G16500"
## [673] "AT3G16620" "AT3G16990" "AT3G17000" "AT3G17120" "AT3G17380" "AT3G17510" "AT3G17520"
## [680] "AT3G17609" "AT3G17690" "AT3G17800" "AT3G17810" "AT3G17860" "AT3G17910" "AT3G18295"
## [687] "AT3G18560" "AT3G19270" "AT3G19580" "AT3G19970" "AT3G21080" "AT3G21230" "AT3G21660"
## [694] "AT3G21670" "AT3G21700" "AT3G21890" "AT3G22160" "AT3G22275" "AT3G22290" "AT3G22370"
## [701] "AT3G22415" "AT3G22550" "AT3G22560" "AT3G22660" "AT3G22890" "AT3G22910" "AT3G24420"
## [708] "AT3G24518" "AT3G24520" "AT3G25250" "AT3G25570" "AT3G25572" "AT3G25760" "AT3G25770"
## [715] "AT3G25780" "AT3G25870" "AT3G25882" "AT3G25890" "AT3G25910" "AT3G26460" "AT3G26690"
## [722] "AT3G26830" "AT3G26840" "AT3G27170" "AT3G27210" "AT3G27415" "AT3G27416" "AT3G27809"
## [729] "AT3G27810" "AT3G27870" "AT3G27960" "AT3G28007" "AT3G28210" "AT3G28220" "AT3G28580"
## [736] "AT3G28600" "AT3G29000" "AT3G29250" "AT3G29575" "AT3G30380" "AT3G41979" "AT3G43250"
## [743] "AT3G43270" "AT3G43440" "AT3G44326" "AT3G44717" "AT3G44720" "AT3G44830" "AT3G44860"
## [750] "AT3G44870" "AT3G45040" "AT3G45130" "AT3G45140" "AT3G45638" "AT3G46080" "AT3G46510"
## [757] "AT3G46640" "AT3G46650" "AT3G46658" "AT3G46660" "AT3G46668" "AT3G46670" "AT3G46690"
## [764] "AT3G47340" "AT3G47420" "AT3G47500" "AT3G47540" "AT3G47730" "AT3G47750" "AT3G47960"
## [771] "AT3G48080" "AT3G48240" "AT3G48350" "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520"
## [778] "AT3G48530" "AT3G48660" "AT3G48870" "AT3G49400" "AT3G49870" "AT3G50260" "AT3G50310"
## [785] "AT3G50410" "AT3G50470" "AT3G50570" "AT3G50620" "AT3G50650" "AT3G50760" "AT3G50770"
## [792] "AT3G50800" "AT3G50910" "AT3G50930" "AT3G50970" "AT3G51090" "AT3G51450" "AT3G52100"
## [799] "AT3G52290" "AT3G52310" "AT3G52430" "AT3G52470" "AT3G52540" "AT3G52740" "AT3G52770"
## [806] "AT3G52870" "AT3G53230" "AT3G53232" "AT3G53600" "AT3G54320" "AT3G54820" "AT3G54950"
## [813] "AT3G55060" "AT3G55110" "AT3G55290" "AT3G55500" "AT3G55640" "AT3G55880" "AT3G55970"
## [820] "AT3G56260" "AT3G56275" "AT3G56400" "AT3G56620" "AT3G56710" "AT3G56891" "AT3G57010"
## [827] "AT3G57020" "AT3G57157" "AT3G57380" "AT3G57450" "AT3G57460" "AT3G57480" "AT3G57520"
## [834] "AT3G57540" "AT3G57760" "AT3G57880" "AT3G57950" "AT3G58795" "AT3G59050" "AT3G59052"
## [841] "AT3G59710" "AT3G59800" "AT3G59900" "AT3G59940" "AT3G60160" "AT3G60180" "AT3G60420"
## [848] "AT3G60450" "AT3G60490" "AT3G60961" "AT3G60966" "AT3G61113" "AT3G61185" "AT3G61190"
## [855] "AT3G61390" "AT3G61420" "AT3G61430" "AT3G61450" "AT3G61630" "AT3G61890" "AT3G61900"
## [862] "AT3G61920" "AT3G61930" "AT3G62760" "AT3G63010" "AT3G63060" "AT3G63380" "AT4G00430"
## [869] "AT4G01026" "AT4G01030" "AT4G01360" "AT4G01535" "AT4G01540" "AT4G01850" "AT4G01895"
## [876] "AT4G02220" "AT4G02320" "AT4G02360" "AT4G02380" "AT4G02850" "AT4G03320" "AT4G04223"
## [883] "AT4G05010" "AT4G05020" "AT4G05030" "AT4G05100" "AT4G05497" "AT4G06534" "AT4G06744"
## [890] "AT4G07950" "AT4G08170" "AT4G08555" "AT4G08870" "AT4G09460" "AT4G10290" "AT4G10390"
## [897] "AT4G11140" "AT4G11690" "AT4G11890" "AT4G11911" "AT4G12000" "AT4G12005" "AT4G12040"
## [904] "AT4G12410" "AT4G12710" "AT4G12720" "AT4G12735" "AT4G13110" "AT4G13860" "AT4G14365"
## [911] "AT4G15100" "AT4G15200" "AT4G15230" "AT4G15248" "AT4G15280" "AT4G15660" "AT4G15670"
## [918] "AT4G15680" "AT4G15690" "AT4G15700" "AT4G15770" "AT4G15940" "AT4G15990" "AT4G16000"
## [925] "AT4G16680" "AT4G16690" "AT4G16730" "AT4G16740" "AT4G16760" "AT4G16820" "AT4G17230"
## [932] "AT4G17240" "AT4G18160" "AT4G18170" "AT4G18360" "AT4G18440" "AT4G18950" "AT4G20830"
## [939] "AT4G20970" "AT4G21060" "AT4G21120" "AT4G21200" "AT4G21215" "AT4G21390" "AT4G21440"
## [946] "AT4G21570" "AT4G21680" "AT4G21780" "AT4G21790" "AT4G21830" "AT4G21850" "AT4G22070"
## [953] "AT4G22590" "AT4G22592" "AT4G22620" "AT4G22758" "AT4G23050" "AT4G23060" "AT4G23420"
## [960] "AT4G23450" "AT4G23600" "AT4G23680" "AT4G24010" "AT4G24026" "AT4G24030" "AT4G24040"
## [967] "AT4G24110" "AT4G24340" "AT4G24380" "AT4G24960" "AT4G25390" "AT4G25433" "AT4G25480"
## [974] "AT4G25670" "AT4G25672" "AT4G25690" "AT4G25692" "AT4G26060" "AT4G26070" "AT4G26080"
## [981] "AT4G26120" "AT4G26470" "AT4G26810" "AT4G27140" "AT4G27350" "AT4G27410" "AT4G27530"
## [988] "AT4G27590" "AT4G27830" "AT4G27860" "AT4G27870" "AT4G28085" "AT4G28088" "AT4G28140"
## [995] "AT4G28150" "AT4G28290" "AT4G28300" "AT4G29740" "AT4G29930" "AT4G29950"
## [ reached getOption("max.print") -- omitted 430 entries ]
##
## $`A12-V12_down`
## [1] "AT1G01030" "AT1G01120" "AT1G01300" "AT1G01470" "AT1G01610" "AT1G01620" "AT1G01720"
## [8] "AT1G01900" "AT1G02205" "AT1G02400" "AT1G02405" "AT1G02460" "AT1G03020" "AT1G04220"
## [15] "AT1G07150" "AT1G07610" "AT1G08200" "AT1G09530" "AT1G09950" "AT1G10370" "AT1G10530"
## [22] "AT1G10560" "AT1G10760" "AT1G10770" "AT1G11720" "AT1G11925" "AT1G12420" "AT1G13740"
## [29] "AT1G13820" "AT1G13920" "AT1G13930" "AT1G14120" "AT1G15080" "AT1G15100" "AT1G15170"
## [36] "AT1G15180" "AT1G15670" "AT1G16370" "AT1G16410" "AT1G16850" "AT1G17420" "AT1G17940"
## [43] "AT1G19570" "AT1G19640" "AT1G19650" "AT1G19670" "AT1G19680" "AT1G19970" "AT1G20030"
## [50] "AT1G20070" "AT1G20440" "AT1G20450" "AT1G20823" "AT1G21070" "AT1G22550" "AT1G22770"
## [57] "AT1G25422" "AT1G25425" "AT1G25450" "AT1G25500" "AT1G26730" "AT1G26770" "AT1G26920"
## [64] "AT1G27030" "AT1G27640" "AT1G27730" "AT1G28010" "AT1G28050" "AT1G28360" "AT1G29330"
## [71] "AT1G30240" "AT1G31710" "AT1G32860" "AT1G32910" "AT1G34210" "AT1G43160" "AT1G44350"
## [78] "AT1G48100" "AT1G49450" "AT1G49650" "AT1G50640" "AT1G51090" "AT1G51500" "AT1G51780"
## [85] "AT1G52030" "AT1G52720" "AT1G53170" "AT1G54010" "AT1G54030" "AT1G54040" "AT1G54095"
## [92] "AT1G55260" "AT1G55490" "AT1G56580" "AT1G58270" "AT1G59740" "AT1G60190" "AT1G60270"
## [99] "AT1G61110" "AT1G61340" "AT1G62440" "AT1G62975" "AT1G63040" "AT1G64150" "AT1G64380"
## [106] "AT1G64390" "AT1G64620" "AT1G64670" "AT1G65860" "AT1G66280" "AT1G67420" "AT1G68350"
## [113] "AT1G68500" "AT1G69140" "AT1G69295" "AT1G69530" "AT1G69600" "AT1G69870" "AT1G70300"
## [120] "AT1G70640" "AT1G70700" "AT1G72040" "AT1G72140" "AT1G72180" "AT1G73210" "AT1G73390"
## [127] "AT1G73480" "AT1G73500" "AT1G73590" "AT1G74370" "AT1G74950" "AT1G75370" "AT1G75580"
## [134] "AT1G75800" "AT1G76610" "AT1G76790" "AT1G77680" "AT1G78060" "AT1G78070" "AT1G78080"
## [141] "AT1G79170" "AT1G79570" "AT1G80060" "AT1G80120" "AT1G80530" "AT1G80580" "AT1G80820"
## [148] "AT1G80840" "AT1G80850" "AT2G01830" "AT2G01890" "AT2G03760" "AT2G04080" "AT2G06050"
## [155] "AT2G06255" "AT2G16630" "AT2G17450" "AT2G18969" "AT2G18970" "AT2G20880" "AT2G21140"
## [162] "AT2G22080" "AT2G22200" "AT2G22330" "AT2G22770" "AT2G23130" "AT2G23340" "AT2G23760"
## [169] "AT2G24210" "AT2G25130" "AT2G27510" "AT2G27820" "AT2G27830" "AT2G28790" "AT2G29440"
## [176] "AT2G29450" "AT2G29670" "AT2G29710" "AT2G29730" "AT2G30040" "AT2G30360" "AT2G30362"
## [183] "AT2G30540" "AT2G30820" "AT2G30830" "AT2G31380" "AT2G32235" "AT2G32240" "AT2G32510"
## [190] "AT2G32990" "AT2G33380" "AT2G34070" "AT2G34080" "AT2G35210" "AT2G35710" "AT2G35960"
## [197] "AT2G36380" "AT2G36590" "AT2G36790" "AT2G36792" "AT2G36815" "AT2G36830" "AT2G36885"
## [204] "AT2G37040" "AT2G37170" "AT2G37180" "AT2G37590" "AT2G37620" "AT2G37640" "AT2G38530"
## [211] "AT2G38540" "AT2G38750" "AT2G38980" "AT2G39020" "AT2G39250" "AT2G39980" "AT2G40620"
## [218] "AT2G41170" "AT2G41540" "AT2G41730" "AT2G42150" "AT2G42530" "AT2G42540" "AT2G42600"
## [225] "AT2G43018" "AT2G43020" "AT2G43535" "AT2G43550" "AT2G44578" "AT2G44640" "AT2G44840"
## [232] "AT2G45470" "AT2G45960" "AT2G46370" "AT2G46630" "AT2G46930" "AT2G47180" "AT2G47260"
## [239] "AT2G47485" "AT2G47840" "AT2G47950" "AT3G02020" "AT3G02510" "AT3G03190" "AT3G03780"
## [246] "AT3G03980" "AT3G04000" "AT3G04010" "AT3G04630" "AT3G05640" "AT3G05800" "AT3G05810"
## [253] "AT3G06020" "AT3G06030" "AT3G06035" "AT3G06500" "AT3G07320" "AT3G08030" "AT3G08670"
## [260] "AT3G09032" "AT3G09940" "AT3G10985" "AT3G11170" "AT3G11210" "AT3G11470" "AT3G11480"
## [267] "AT3G12120" "AT3G12145" "AT3G12920" "AT3G13230" "AT3G14067" "AT3G14870" "AT3G15210"
## [274] "AT3G15800" "AT3G15950" "AT3G16400" "AT3G16420" "AT3G16450" "AT3G16460" "AT3G16500"
## [281] "AT3G17120" "AT3G17510" "AT3G17860" "AT3G19710" "AT3G19720" "AT3G19820" "AT3G21670"
## [288] "AT3G22275" "AT3G22410" "AT3G22415" "AT3G22560" "AT3G23810" "AT3G24518" "AT3G24520"
## [295] "AT3G25700" "AT3G25760" "AT3G25770" "AT3G25780" "AT3G26060" "AT3G26520" "AT3G27170"
## [302] "AT3G27180" "AT3G27960" "AT3G28220" "AT3G28600" "AT3G43250" "AT3G43270" "AT3G44870"
## [309] "AT3G45140" "AT3G46658" "AT3G46660" "AT3G47500" "AT3G47750" "AT3G47960" "AT3G48350"
## [316] "AT3G48450" "AT3G48460" "AT3G48510" "AT3G48520" "AT3G48720" "AT3G49870" "AT3G50260"
## [323] "AT3G50410" "AT3G50620" "AT3G50760" "AT3G51090" "AT3G52290" "AT3G53370" "AT3G53420"
## [330] "AT3G54820" "AT3G54830" "AT3G54920" "AT3G54950" "AT3G55290" "AT3G55500" "AT3G56260"
## [337] "AT3G56270" "AT3G57020" "AT3G57157" "AT3G57760" "AT3G59050" "AT3G59052" "AT3G59710"
## [344] "AT3G59940" "AT3G59970" "AT3G60220" "AT3G60490" "AT3G61420" "AT3G61430" "AT3G61490"
## [351] "AT3G61630" "AT3G61900" "AT3G61920" "AT3G62700" "AT3G62860" "AT3G63200" "AT4G00360"
## [358] "AT4G00400" "AT4G00430" "AT4G01026" "AT4G01030" "AT4G02360" "AT4G04840" "AT4G05010"
## [365] "AT4G05020" "AT4G05100" "AT4G06534" "AT4G06536" "AT4G06744" "AT4G08170" "AT4G08870"
## [372] "AT4G10290" "AT4G10390" "AT4G11320" "AT4G12000" "AT4G12005" "AT4G12030" "AT4G12410"
## [379] "AT4G13770" "AT4G13860" "AT4G14040" "AT4G14440" "AT4G15100" "AT4G15210" "AT4G15770"
## [386] "AT4G15920" "AT4G16730" "AT4G16740" "AT4G17340" "AT4G17470" "AT4G17550" "AT4G18440"
## [393] "AT4G21060" "AT4G21200" "AT4G21440" "AT4G21570" "AT4G21780" "AT4G21790" "AT4G22010"
## [400] "AT4G22620" "AT4G23060" "AT4G23420" "AT4G23500" "AT4G23600" "AT4G24510" "AT4G24960"
## [407] "AT4G24972" "AT4G25433" "AT4G25700" "AT4G25830" "AT4G26700" "AT4G27350" "AT4G27410"
## [414] "AT4G27520" "AT4G27590" "AT4G27870" "AT4G28140" "AT4G28150" "AT4G29740" "AT4G30180"
## [421] "AT4G30210" "AT4G30440" "AT4G30530" "AT4G31780" "AT4G31870" "AT4G32290" "AT4G32780"
## [428] "AT4G32785" "AT4G33220" "AT4G33467" "AT4G33970" "AT4G34200" "AT4G34290" "AT4G34650"
## [435] "AT4G35090" "AT4G35100" "AT4G35160" "AT4G35320" "AT4G35480" "AT4G35550" "AT4G35560"
## [442] "AT4G35720" "AT4G36010" "AT4G36360" "AT4G36780" "AT4G36900" "AT4G37409" "AT4G37410"
## [449] "AT4G37760" "AT4G37990" "AT4G38160" "AT4G38410" "AT4G38770" "AT4G38810" "AT4G39330"
## [456] "AT4G39350" "AT4G39980" "AT5G01210" "AT5G01215" "AT5G01760" "AT5G01840" "AT5G02170"
## [463] "AT5G02460" "AT5G03030" "AT5G04200" "AT5G04250" "AT5G04530" "AT5G04770" "AT5G05440"
## [470] "AT5G06570" "AT5G06980" "AT5G07010" "AT5G07030" "AT5G07690" "AT5G07700" "AT5G08640"
## [477] "AT5G09430" "AT5G09440" "AT5G09500" "AT5G10720" "AT5G12860" "AT5G13220" "AT5G13400"
## [484] "AT5G14200" "AT5G14565" "AT5G14570" "AT5G14700" "AT5G15030" "AT5G15190" "AT5G15240"
## [491] "AT5G15960" "AT5G16290" "AT5G16350" "AT5G16600" "AT5G17460" "AT5G17490" "AT5G17520"
## [498] "AT5G19100" "AT5G19110" "AT5G19730" "AT5G20270" "AT5G20740" "AT5G21280" "AT5G22500"
## [505] "AT5G22740" "AT5G23010" "AT5G23820" "AT5G24030" "AT5G24080" "AT5G24150" "AT5G24155"
## [512] "AT5G24240" "AT5G24280" "AT5G24420" "AT5G24770" "AT5G24780" "AT5G24920" "AT5G26260"
## [519] "AT5G27150" "AT5G27930" "AT5G28290" "AT5G38005" "AT5G38120" "AT5G38130" "AT5G39320"
## [526] "AT5G40380" "AT5G40390" "AT5G40460" "AT5G40540" "AT5G41120" "AT5G41315" "AT5G41590"
## [533] "AT5G41600" "AT5G42650" "AT5G42900" "AT5G43170" "AT5G44050" "AT5G44210" "AT5G44420"
## [540] "AT5G45950" "AT5G47240" "AT5G47330" "AT5G52050" "AT5G52310" "AT5G52882" "AT5G53200"
## [547] "AT5G53760" "AT5G54300" "AT5G55090" "AT5G55180" "AT5G55530" "AT5G56760" "AT5G56880"
## [554] "AT5G57100" "AT5G57260" "AT5G57800" "AT5G58480" "AT5G58900" "AT5G59030" "AT5G59050"
## [561] "AT5G59080" "AT5G59090" "AT5G59130" "AT5G59340" "AT5G59480" "AT5G59760" "AT5G60850"
## [568] "AT5G60860" "AT5G60870" "AT5G60890" "AT5G61810" "AT5G61890" "AT5G62350" "AT5G62360"
## [575] "AT5G62430" "AT5G62470" "AT5G62670" "AT5G62690" "AT5G62700" "AT5G63450" "AT5G64170"
## [582] "AT5G64260" "AT5G64280" "AT5G64700" "AT5G64710" "AT5G64740" "AT5G64750" "AT5G65280"
## [589] "AT5G65660" "AT5G66052" "AT5G66053" "AT5G66590" "AT5G66650" "AT5G67070" "AT5G67180"
## [596] "AT5G67190" "AT5G67210" "AT5G67300" "AT5G67350" "AT5G67480"save(DEGlist, file="DEGlist.RData") # save for clusterProfiler::compareClusters work
debug(GOCluster_Report)
BatchResult <- systemPipeR::GOCluster_Report(catdb=catdb, setlist=DEGlist, method="all", id_type="gene", CLSZ=2, cutoff=0.9, gocats=c("MF", "BP", "CC"), recordSpecGO=NULL)##
## Processing cluster no M1-A1_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M1-V1_up_down with method: "all" (GOHyperGAll)
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## Processing cluster no A1-V1_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M6-A6_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M6-V6_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no A6-V6_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M12-A12_up_down with method: "all" (GOHyperGAll)
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## Processing cluster no M12-V12_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no A12-V12_up_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M1-A1_up with method: "all" (GOHyperGAll)
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## Processing cluster no M1-V1_up with method: "all" (GOHyperGAll)
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## Processing cluster no A1-V1_up with method: "all" (GOHyperGAll)
##
## Processing cluster no M6-A6_up with method: "all" (GOHyperGAll)
##
## Processing cluster no M6-V6_up with method: "all" (GOHyperGAll)
##
## Processing cluster no A6-V6_up with method: "all" (GOHyperGAll)
##
## Processing cluster no M12-A12_up with method: "all" (GOHyperGAll)
##
## Processing cluster no M12-V12_up with method: "all" (GOHyperGAll)
##
## Processing cluster no A12-V12_up with method: "all" (GOHyperGAll)
##
## Processing cluster no M1-A1_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M1-V1_down with method: "all" (GOHyperGAll)
##
## Processing cluster no A1-V1_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M6-A6_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M6-V6_down with method: "all" (GOHyperGAll)
##
## Processing cluster no A6-V6_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M12-A12_down with method: "all" (GOHyperGAll)
##
## Processing cluster no M12-V12_down with method: "all" (GOHyperGAll)
##
## Processing cluster no A12-V12_down with method: "all" (GOHyperGAll)# GOCluster_Report is part of GOHyperGALL which is similar to GOstats::GOHyperG
# GOCluster_Report is batch analysis of many gene sets
str(BatchResult)## 'data.frame': 243 obs. of 10 variables:
## $ CLID : Factor w/ 27 levels "M1-A1_up_down",..: 1 1 1 1 1 1 1 1 1 2 ...
## $ CLSZ : int 24 24 24 24 24 24 24 24 24 1059 ...
## $ GOID : Factor w/ 44919 levels "GO:0000006","GO:0000007",..: 1 2 11151 11152 11153 40747 40748 40749 44919 1 ...
## $ NodeSize : int 0 0 NA 0 0 NA 0 0 NA 0 ...
## $ SampleMatch: int 0 0 24 0 0 22 0 0 24 0 ...
## $ Phyper : num 1 1 NA 1 1 NA 1 1 NA 1 ...
## $ Padj : num 1 1 NA 1 1 NA 1 1 NA 1 ...
## $ Term : Factor w/ 44917 levels "'de novo' actin filament nucleation",..: 14788 18209 NA 20234 20081 NA 28016 26028 NA 14788 ...
## $ Ont : Factor w/ 4 levels "BP","CC","MF",..: 3 3 3 1 1 1 2 2 2 3 ...
## $ SampleKeys : Factor w/ 146 levels "NA","AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, A"| __truncated__,..: 1 1 2 1 1 4 1 1 2 1 ...BatchResult## CLID CLSZ GOID NodeSize SampleMatch Phyper Padj
## 1 M1-A1_up_down 24 GO:0000006 0 0 1 1
## 2 M1-A1_up_down 24 GO:0000007 0 0 1 1
## 3 M1-A1_up_down 24 no_annot_MF NA 24 NA NA
## 4 M1-A1_up_down 24 GO:0000001 0 0 1 1
## 5 M1-A1_up_down 24 GO:0000002 0 0 1 1
## 6 M1-A1_up_down 24 no_annot_BP NA 22 NA NA
## 7 M1-A1_up_down 24 GO:0000015 0 0 1 1
## 8 M1-A1_up_down 24 GO:0000109 0 0 1 1
## 9 M1-A1_up_down 24 no_annot_CC NA 24 NA NA
## 10 M1-V1_up_down 1059 GO:0000006 0 0 1 1
## 11 M1-V1_up_down 1059 GO:0000007 0 0 1 1
## 12 M1-V1_up_down 1059 no_annot_MF NA 1013 NA NA
## 13 M1-V1_up_down 1059 GO:0000001 0 0 1 1
## 14 M1-V1_up_down 1059 GO:0000002 0 0 1 1
## 15 M1-V1_up_down 1059 no_annot_BP NA 913 NA NA
## 16 M1-V1_up_down 1059 GO:0000015 0 0 1 1
## 17 M1-V1_up_down 1059 GO:0000109 0 0 1 1
## 18 M1-V1_up_down 1059 no_annot_CC NA 1043 NA NA
## 19 A1-V1_up_down 50 GO:0000006 0 0 1 1
## 20 A1-V1_up_down 50 GO:0000007 0 0 1 1
## 21 A1-V1_up_down 50 no_annot_MF NA 49 NA NA
## 22 A1-V1_up_down 50 GO:0000001 0 0 1 1
## 23 A1-V1_up_down 50 GO:0000002 0 0 1 1
## 24 A1-V1_up_down 50 no_annot_BP NA 43 NA NA
## 25 A1-V1_up_down 50 GO:0000015 0 0 1 1
## 26 A1-V1_up_down 50 GO:0000109 0 0 1 1
## 27 A1-V1_up_down 50 no_annot_CC NA 49 NA NA
## 28 M6-A6_up_down 2373 GO:0000006 0 0 1 1
## 29 M6-A6_up_down 2373 GO:0000007 0 0 1 1
## 30 M6-A6_up_down 2373 no_annot_MF NA 2256 NA NA
## 31 M6-A6_up_down 2373 GO:0000001 0 0 1 1
## 32 M6-A6_up_down 2373 GO:0000002 0 0 1 1
## 33 M6-A6_up_down 2373 no_annot_BP NA 1995 NA NA
## 34 M6-A6_up_down 2373 GO:0000015 0 0 1 1
## 35 M6-A6_up_down 2373 GO:0000109 0 0 1 1
## 36 M6-A6_up_down 2373 no_annot_CC NA 2317 NA NA
## 37 M6-V6_up_down 1311 GO:0000006 0 0 1 1
## 38 M6-V6_up_down 1311 GO:0000007 0 0 1 1
## 39 M6-V6_up_down 1311 no_annot_MF NA 1256 NA NA
## 40 M6-V6_up_down 1311 GO:0000001 0 0 1 1
## 41 M6-V6_up_down 1311 GO:0000002 0 0 1 1
## 42 M6-V6_up_down 1311 no_annot_BP NA 1094 NA NA
## 43 M6-V6_up_down 1311 GO:0000015 0 0 1 1
## 44 M6-V6_up_down 1311 GO:0000109 0 0 1 1
## 45 M6-V6_up_down 1311 no_annot_CC NA 1275 NA NA
## 46 A6-V6_up_down 539 GO:0000006 0 0 1 1
## 47 A6-V6_up_down 539 GO:0000007 0 0 1 1
## 48 A6-V6_up_down 539 no_annot_MF NA 524 NA NA
## 49 A6-V6_up_down 539 GO:0000001 0 0 1 1
## 50 A6-V6_up_down 539 GO:0000002 0 0 1 1
## 51 A6-V6_up_down 539 no_annot_BP NA 476 NA NA
## 52 A6-V6_up_down 539 GO:0000015 0 0 1 1
## 53 A6-V6_up_down 539 GO:0000109 0 0 1 1
## 54 A6-V6_up_down 539 no_annot_CC NA 527 NA NA
## 55 M12-A12_up_down 3203 GO:0000006 0 0 1 1
## 56 M12-A12_up_down 3203 GO:0000007 0 0 1 1
## 57 M12-A12_up_down 3203 no_annot_MF NA 3030 NA NA
## 58 M12-A12_up_down 3203 GO:0000001 0 0 1 1
## 59 M12-A12_up_down 3203 GO:0000002 0 0 1 1
## 60 M12-A12_up_down 3203 no_annot_BP NA 2699 NA NA
## 61 M12-A12_up_down 3203 GO:0000015 0 0 1 1
## 62 M12-A12_up_down 3203 GO:0000109 0 0 1 1
## 63 M12-A12_up_down 3203 no_annot_CC NA 3122 NA NA
## 64 M12-V12_up_down 2228 GO:0000006 0 0 1 1
## 65 M12-V12_up_down 2228 GO:0000007 0 0 1 1
## 66 M12-V12_up_down 2228 no_annot_MF NA 2083 NA NA
## 67 M12-V12_up_down 2228 GO:0000001 0 0 1 1
## 68 M12-V12_up_down 2228 GO:0000002 0 0 1 1
## 69 M12-V12_up_down 2228 no_annot_BP NA 1859 NA NA
## 70 M12-V12_up_down 2228 GO:0000015 0 0 1 1
## 71 M12-V12_up_down 2228 GO:0000109 0 0 1 1
## 72 M12-V12_up_down 2228 no_annot_CC NA 2171 NA NA
## 73 A12-V12_up_down 988 GO:0000006 0 0 1 1
## 74 A12-V12_up_down 988 GO:0000007 0 0 1 1
## 75 A12-V12_up_down 988 no_annot_MF NA 935 NA NA
## 76 A12-V12_up_down 988 GO:0000001 0 0 1 1
## 77 A12-V12_up_down 988 GO:0000002 0 0 1 1
## 78 A12-V12_up_down 988 no_annot_BP NA 850 NA NA
## 79 A12-V12_up_down 988 GO:0000015 0 0 1 1
## 80 A12-V12_up_down 988 GO:0000109 0 0 1 1
## 81 A12-V12_up_down 988 no_annot_CC NA 959 NA NA
## 82 M1-A1_up 2 GO:0000006 0 0 1 1
## 83 M1-A1_up 2 GO:0000007 0 0 1 1
## 84 M1-A1_up 2 no_annot_MF NA 2 NA NA
## 85 M1-A1_up 2 GO:0000001 0 0 1 1
## 86 M1-A1_up 2 GO:0000002 0 0 1 1
## 87 M1-A1_up 2 no_annot_BP NA 2 NA NA
## 88 M1-A1_up 2 GO:0000015 0 0 1 1
## 89 M1-A1_up 2 GO:0000109 0 0 1 1
## 90 M1-A1_up 2 no_annot_CC NA 2 NA NA
## 91 M1-V1_up 615 GO:0000006 0 0 1 1
## 92 M1-V1_up 615 GO:0000007 0 0 1 1
## 93 M1-V1_up 615 no_annot_MF NA 587 NA NA
## 94 M1-V1_up 615 GO:0000001 0 0 1 1
## 95 M1-V1_up 615 GO:0000002 0 0 1 1
## 96 M1-V1_up 615 no_annot_BP NA 524 NA NA
## 97 M1-V1_up 615 GO:0000015 0 0 1 1
## 98 M1-V1_up 615 GO:0000109 0 0 1 1
## 99 M1-V1_up 615 no_annot_CC NA 603 NA NA
## 100 A1-V1_up 29 GO:0000006 0 0 1 1
## Term Ont
## 1 high-affinity zinc transmembrane transporter activity MF
## 2 low-affinity zinc ion transmembrane transporter activity MF
## 3 <NA> MF
## 4 mitochondrion inheritance BP
## 5 mitochondrial genome maintenance BP
## 6 <NA> BP
## 7 phosphopyruvate hydratase complex CC
## 8 nucleotide-excision repair complex CC
## 9 <NA> CC
## 10 high-affinity zinc transmembrane transporter activity MF
## 11 low-affinity zinc ion transmembrane transporter activity MF
## 12 <NA> MF
## 13 mitochondrion inheritance BP
## 14 mitochondrial genome maintenance BP
## 15 <NA> BP
## 16 phosphopyruvate hydratase complex CC
## 17 nucleotide-excision repair complex CC
## 18 <NA> CC
## 19 high-affinity zinc transmembrane transporter activity MF
## 20 low-affinity zinc ion transmembrane transporter activity MF
## 21 <NA> MF
## 22 mitochondrion inheritance BP
## 23 mitochondrial genome maintenance BP
## 24 <NA> BP
## 25 phosphopyruvate hydratase complex CC
## 26 nucleotide-excision repair complex CC
## 27 <NA> CC
## 28 high-affinity zinc transmembrane transporter activity MF
## 29 low-affinity zinc ion transmembrane transporter activity MF
## 30 <NA> MF
## 31 mitochondrion inheritance BP
## 32 mitochondrial genome maintenance BP
## 33 <NA> BP
## 34 phosphopyruvate hydratase complex CC
## 35 nucleotide-excision repair complex CC
## 36 <NA> CC
## 37 high-affinity zinc transmembrane transporter activity MF
## 38 low-affinity zinc ion transmembrane transporter activity MF
## 39 <NA> MF
## 40 mitochondrion inheritance BP
## 41 mitochondrial genome maintenance BP
## 42 <NA> BP
## 43 phosphopyruvate hydratase complex CC
## 44 nucleotide-excision repair complex CC
## 45 <NA> CC
## 46 high-affinity zinc transmembrane transporter activity MF
## 47 low-affinity zinc ion transmembrane transporter activity MF
## 48 <NA> MF
## 49 mitochondrion inheritance BP
## 50 mitochondrial genome maintenance BP
## 51 <NA> BP
## 52 phosphopyruvate hydratase complex CC
## 53 nucleotide-excision repair complex CC
## 54 <NA> CC
## 55 high-affinity zinc transmembrane transporter activity MF
## 56 low-affinity zinc ion transmembrane transporter activity MF
## 57 <NA> MF
## 58 mitochondrion inheritance BP
## 59 mitochondrial genome maintenance BP
## 60 <NA> BP
## 61 phosphopyruvate hydratase complex CC
## 62 nucleotide-excision repair complex CC
## 63 <NA> CC
## 64 high-affinity zinc transmembrane transporter activity MF
## 65 low-affinity zinc ion transmembrane transporter activity MF
## 66 <NA> MF
## 67 mitochondrion inheritance BP
## 68 mitochondrial genome maintenance BP
## 69 <NA> BP
## 70 phosphopyruvate hydratase complex CC
## 71 nucleotide-excision repair complex CC
## 72 <NA> CC
## 73 high-affinity zinc transmembrane transporter activity MF
## 74 low-affinity zinc ion transmembrane transporter activity MF
## 75 <NA> MF
## 76 mitochondrion inheritance BP
## 77 mitochondrial genome maintenance BP
## 78 <NA> BP
## 79 phosphopyruvate hydratase complex CC
## 80 nucleotide-excision repair complex CC
## 81 <NA> CC
## 82 high-affinity zinc transmembrane transporter activity MF
## 83 low-affinity zinc ion transmembrane transporter activity MF
## 84 <NA> MF
## 85 mitochondrion inheritance BP
## 86 mitochondrial genome maintenance BP
## 87 <NA> BP
## 88 phosphopyruvate hydratase complex CC
## 89 nucleotide-excision repair complex CC
## 90 <NA> CC
## 91 high-affinity zinc transmembrane transporter activity MF
## 92 low-affinity zinc ion transmembrane transporter activity MF
## 93 <NA> MF
## 94 mitochondrion inheritance BP
## 95 mitochondrial genome maintenance BP
## 96 <NA> BP
## 97 phosphopyruvate hydratase complex CC
## 98 nucleotide-excision repair complex CC
## 99 <NA> CC
## 100 high-affinity zinc transmembrane transporter activity MF
## SampleKeys
## 1 NA
## 2 NA
## 3 AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G18540, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 4 NA
## 5 NA
## 6 AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 7 NA
## 8 NA
## 9 AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G18540, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 10 NA
## 11 NA
## 12 AT1G01060, AT1G01190, AT1G01390, AT1G01420, AT1G01520, AT1G01600, AT1G01610, AT1G01640, AT1G02710, AT1G02820, AT1G02920, AT1G02930, AT1G03050, AT1G03055, AT1G03300, AT1G03360, AT1G03905, AT1G04220, AT1G04250, AT1G04280, AT1G04530, AT1G04550, AT1G04620, AT1G04770, AT1G04990, AT1G05020, AT1G05300, AT1G05560, AT1G05562, AT1G05680, AT1G05710, AT1G06460, AT1G07010, AT1G07040, AT1G07050, AT1G07160, AT1G07180, AT1G07420, AT1G07490, AT1G08610, AT1G08980, AT1G09180, AT1G10040, AT1G10070, AT1G10200, AT1G10460, AT1G10710, AT1G10960, AT1G10990, AT1G11200, AT1G11362, AT1G11925, AT1G11950, AT1G12330, AT1G12370, AT1G12710, AT1G12730, AT1G13030, AT1G13080, AT1G13110, AT1G13270, AT1G13650, AT1G13730, AT1G13800, AT1G13810, AT1G14150, AT1G14170, AT1G14345, AT1G14540, AT1G14840, AT1G14870, AT1G15125, AT1G15290, AT1G15510, AT1G15550, AT1G15670, AT1G15870, AT1G15890, AT1G16090, AT1G16350, AT1G16390, AT1G16730, AT1G17050, AT1G17665, AT1G18800, AT1G19130, AT1G19140, AT1G19150, AT1G19370, AT1G19450, AT1G19700, AT1G20010, AT1G20620, AT1G20630, AT1G20840, AT1G21100, AT1G21110, AT1G21120, AT1G21130, AT1G21500, AT1G22370, AT1G22480, AT1G22490, AT1G22590, AT1G22770, AT1G22850, AT1G23100, AT1G23410, AT1G23740, AT1G25320, AT1G25390, AT1G25480, AT1G26220, AT1G26380, AT1G26390, AT1G26410, AT1G26420, AT1G26665, AT1G27020, AT1G27120, AT1G27480, AT1G27630, AT1G28010, AT1G28050, AT1G28330, AT1G29160, AT1G29600, AT1G29660, AT1G30280, AT1G30282, AT1G30420, AT1G30620, AT1G30700, AT1G30755, AT1G30960, AT1G31690, AT1G31920, AT1G31950, AT1G32440, AT1G32760, AT1G32900, AT1G33030, AT1G33170, AT1G33410, AT1G34380, AT1G42550, AT1G42970, AT1G44000, AT1G44446, AT1G48100, AT1G48200, AT1G48210, AT1G48370, AT1G48480, AT1G48570, AT1G48605, AT1G49010, AT1G49230, AT1G49430, AT1G49490, AT1G49660, AT1G49720, AT1G50840, AT1G51080, AT1G51100, AT1G51310, AT1G51610, AT1G51620, AT1G51850, AT1G51890, AT1G51940, AT1G52200, AT1G52830, AT1G53035, AT1G53090, AT1G53100, AT1G53625, AT1G54500, AT1G55260, AT1G55450, AT1G55960, AT1G56140, AT1G56145, AT1G56300, AT1G56470, AT1G57630, AT1G58520, AT1G59700, AT1G59950, AT1G60730, AT1G61300, AT1G61360, AT1G61420, AT1G61550, AT1G61560, AT1G62170, AT1G62180, AT1G62630, AT1G62720, AT1G62750, AT1G62760, AT1G62960, AT1G63180, AT1G63250, AT1G64110, AT1G64220, AT1G64500, AT1G64600, AT1G64670, AT1G64680, AT1G64760, AT1G64770, AT1G64780, AT1G64880, AT1G64900, AT1G64970, AT1G65060, AT1G65070, AT1G65080, AT1G65490, AT1G65820, AT1G65920, AT1G66130, AT1G66330, AT1G66540, AT1G66700, AT1G66725, AT1G66780, AT1G66840, AT1G67370, AT1G67590, AT1G67750, AT1G67970, AT1G67980, AT1G68050, AT1G68440, AT1G69200, AT1G69520, AT1G70000, AT1G70220, AT1G70250, AT1G70580, AT1G70800, AT1G71000, AT1G71400, AT1G71520, AT1G71850, AT1G72040, AT1G72270, AT1G72330, AT1G72416, AT1G72770, AT1G73320, AT1G73600, AT1G73602, AT1G73870, AT1G73890, AT1G74010, AT1G74070, AT1G74290, AT1G74560, AT1G75100, AT1G75280, AT1G76240, AT1G76470, AT1G76790, AT1G77380, AT1G77580, AT1G77810, AT1G77855, AT1G78290, AT1G78370, AT1G78510, AT1G78930, AT1G79440, AT1G79460, AT1G79680, AT1G80270, AT1G80760, AT2G01280, AT2G01540, AT2G01890, AT2G02010, AT2G02100, AT2G02150, AT2G02220, AT2G02230, AT2G02410, AT2G02930, AT2G03550, AT2G04030, AT2G04039, AT2G04790, AT2G05160, AT2G05630, AT2G11890, AT2G14170, AT2G14880, AT2G15000, AT2G15020, AT2G15890, AT2G16365, AT2G17740, AT2G17972, AT2G18230, AT2G18330, AT2G18560, AT2G19190, AT2G19450, AT2G19670, AT2G20020, AT2G20585, AT2G21130, AT2G21185, AT2G21187, AT2G21320, AT2G21330, AT2G21660, AT2G22240, AT2G22450, AT2G22970, AT2G22980, AT2G23030, AT2G23110, AT2G23290, AT2G23340, AT2G23430, AT2G23672, AT2G24120, AT2G24440, AT2G24540, AT2G24545, AT2G24570, AT2G24580, AT2G24645, AT2G24762, AT2G24820, AT2G25530, AT2G25680, AT2G25730, AT2G25930, AT2G26080, AT2G26560, AT2G26650, AT2G26692, AT2G27200, AT2G27420, AT2G28190, AT2G28790, AT2G28930, AT2G29090, AT2G29720, AT2G29740, AT2G30100, AT2G30150, AT2G30395, AT2G30424, AT2G30520, AT2G30750, AT2G30760, AT2G30770, AT2G31010, AT2G31380, AT2G31750, AT2G31751, AT2G32150, AT2G32530, AT2G32540, AT2G33250, AT2G33830, AT2G35760, AT2G35950, AT2G35980, AT2G36000, AT2G36390, AT2G36590, AT2G36750, AT2G36800, AT2G37240, AT2G37430, AT2G37460, AT2G37630, AT2G37940, AT2G37970, AT2G38465, AT2G38750, AT2G38760, AT2G38860, AT2G39200, AT2G39380, AT2G39400, AT2G39518, AT2G39530, AT2G39660, AT2G39710, AT2G39730, AT2G39900, AT2G39920, AT2G40080, AT2G40110, AT2G40113, AT2G40340, AT2G41050, AT2G41250, AT2G41290, AT2G41660, AT2G42360, AT2G42710, AT2G42975, AT2G43100, AT2G43590, AT2G43620, AT2G43650, AT2G43710, AT2G43940, AT2G44080, AT2G45340, AT2G46670, AT2G46790, AT2G46810, AT2G46830, AT2G46940, AT2G47370, AT2G47390, AT2G47450, AT2G47485, AT2G47630, AT3G01060, AT3G01140, AT3G01142, AT3G01180, AT3G01440, AT3G02800, AT3G02830, AT3G04140, AT3G04420, AT3G04950, AT3G05390, AT3G06145, AT3G06520, AT3G06750, AT3G06920, AT3G07310, AT3G07640, AT3G07650, AT3G07750, AT3G07770, AT3G09160, AT3G09190, AT3G09390, AT3G09405, AT3G09600, AT3G09650, AT3G10040, AT3G10110, AT3G10410, AT3G10525, AT3G11020, AT3G11090, AT3G11110, AT3G11230, AT3G12030, AT3G12220, AT3G12230, AT3G12320, AT3G13450, AT3G13470, AT3G13700, AT3G13710, AT3G14360, AT3G14810, AT3G14900, AT3G15354, AT3G15356, AT3G15540, AT3G15620, AT3G15850, AT3G15990, AT3G16180, AT3G16360, AT3G16520, AT3G16530, AT3G16565, AT3G17160, AT3G17170, AT3G17640, AT3G17840, AT3G18080, AT3G18750, AT3G19000, AT3G19210, AT3G19260, AT3G19440, AT3G19450, AT3G19480, AT3G20410, AT3G21240, AT3G21390, AT3G21460, AT3G21470, AT3G21890, AT3G22120, AT3G22121, AT3G22150, AT3G22235, AT3G22460, AT3G23090, AT3G23210, AT3G23280, AT3G23510, AT3G23930, AT3G23940, AT3G24170, AT3G24190, AT3G24460, AT3G25030, AT3G25670, AT3G26500, AT3G26570, AT3G26670, AT3G26680, AT3G26740, AT3G26830, AT3G27210, AT3G27300, AT3G27350, AT3G28040, AT3G28540, AT3G30460, AT3G30720, AT3G43670, AT3G43790, AT3G43960, AT3G44020, AT3G44300, AT3G44730, AT3G45060, AT3G45390, AT3G46090, AT3G46440, AT3G46640, AT3G46690, AT3G46900, AT3G47070, AT3G47360, AT3G47420, AT3G47430, AT3G47800, AT3G47860, AT3G48280, AT3G48490, AT3G48560, AT3G48660, AT3G48690, AT3G49110, AT3G49120, AT3G49130, AT3G49240, AT3G49470, AT3G49570, AT3G50210, AT3G50480, AT3G50500, AT3G50685, AT3G50810, AT3G51330, AT3G51420, AT3G51750, AT3G51895, AT3G52450, AT3G52720, AT3G52920, AT3G53700, AT3G53830, AT3G53920, AT3G54150, AT3G54220, AT3G54390, AT3G54490, AT3G54500, AT3G54720, AT3G54900, AT3G55150, AT3G55450, AT3G56080, AT3G56160, AT3G56290, AT3G56300, AT3G56330, AT3G56500, AT3G56570, AT3G57020, AT3G57040, AT3G57180, AT3G57190, AT3G57400, AT3G57550, AT3G57700, AT3G58570, AT3G58840, AT3G58990, AT3G59220, AT3G59250, AT3G59350, AT3G59400, AT3G59700, AT3G59900, AT3G61160, AT3G61220, AT3G61880, AT3G62150, AT3G63160, AT3G63200, AT3G63380, AT3G63530, AT4G00050, AT4G00165, AT4G00360, AT4G01037, AT4G01070, AT4G01080, AT4G01130, AT4G01250, AT4G01535, AT4G01750, AT4G02380, AT4G02520, AT4G02630, AT4G02990, AT4G03460, AT4G03600, AT4G04020, AT4G04330, AT4G04610, AT4G05110, AT4G09020, AT4G09350, AT4G09650, AT4G10120, AT4G10600, AT4G10620, AT4G11100, AT4G11175, AT4G11470, AT4G11521, AT4G11600, AT4G12390, AT4G12470, AT4G12480, AT4G12830, AT4G12880, AT4G12980, AT4G13800, AT4G14270, AT4G14440, AT4G14690, AT4G15210, AT4G15233, AT4G15248, AT4G15430, AT4G15480, AT4G15550, AT4G15810, AT4G16146, AT4G16400, AT4G16410, AT4G16690, AT4G16820, AT4G16980, AT4G17140, AT4G17180, AT4G17680, AT4G17880, AT4G17970, AT4G18430, AT4G18540, AT4G18800, AT4G19120, AT4G19170, AT4G19390, AT4G19410, AT4G19810, AT4G19880, AT4G20000, AT4G20090, AT4G20360, AT4G21990, AT4G22710, AT4G22770, AT4G23280, AT4G23550, AT4G23680, AT4G23810, AT4G24540, AT4G24670, AT4G24700, AT4G25290, AT4G25810, AT4G25900, AT4G26270, AT4G26600, AT4G26670, AT4G26800, AT4G26850, AT4G27030, AT4G27130, AT4G27700, AT4G27950, AT4G27970, AT4G28150, AT4G28550, AT4G28660, AT4G28700, AT4G28730, AT4G28740, AT4G28780, AT4G29600, AT4G30470, AT4G30610, AT4G30690, AT4G30960, AT4G31050, AT4G31210, AT4G31390, AT4G31550, AT4G31620, AT4G31870, AT4G32340, AT4G32770, AT4G33010, AT4G33160, AT4G33560, AT4G33980, AT4G33985, AT4G34580, AT4G34610, AT4G34630, AT4G34770, AT4G34900, AT4G34950, AT4G34990, AT4G35090, AT4G35180, AT4G35380, AT4G36580, AT4G36760, AT4G36770, AT4G36950, AT4G37030, AT4G37390, AT4G37410, AT4G37650, AT4G37800, AT4G37925, AT4G38000, AT4G38060, AT4G38540, AT4G38545, AT4G38680, AT4G38960, AT4G38970, AT4G39230, AT4G39270, AT4G39330, AT4G39470, AT4G39510, AT4G39800, AT4G40070, AT5G01015, AT5G01075, AT5G01260, AT5G01410, AT5G01820, AT5G02050, AT5G02160, AT5G02180, AT5G02230, AT5G02260, AT5G02540, AT5G02780, AT5G02830, AT5G03460, AT5G03555, AT5G03760, AT5G05190, AT5G05270, AT5G05410, AT5G05580, AT5G06550, AT5G06690, AT5G06790, AT5G08380, AT5G08490, AT5G08610, AT5G08720, AT5G09500, AT5G09760, AT5G09840, AT5G10150, AT5G10470, AT5G10520, AT5G10820, AT5G10860, AT5G11150, AT5G11210, AT5G11670, AT5G12080, AT5G12110, AT5G12880, AT5G13400, AT5G13730, AT5G13770, AT5G13920, AT5G14560, AT5G14580, AT5G14610, AT5G14740, AT5G15030, AT5G15640, AT5G15840, AT5G15845, AT5G15850, AT5G15948, AT5G15950, AT5G16340, AT5G16530, AT5G17050, AT5G17170, AT5G17300, AT5G18470, AT5G18525, AT5G18540, AT5G18570, AT5G18670, AT5G19300, AT5G19730, AT5G19850, AT5G19970, AT5G20070, AT5G20220, AT5G20225, AT5G20380, AT5G20950, AT5G21100, AT5G22390, AT5G22640, AT5G23070, AT5G23235, AT5G23240, AT5G23575, AT5G23660, AT5G23730, AT5G23750, AT5G23760, AT5G24030, AT5G24110, AT5G24120, AT5G24150, AT5G24165, AT5G24240, AT5G24280, AT5G24380, AT5G24470, AT5G24580, AT5G24660, AT5G24850, AT5G25120, AT5G25130, AT5G25140, AT5G25340, AT5G25590, AT5G25630, AT5G26260, AT5G26340, AT5G26570, AT5G27760, AT5G28450, AT5G28500, AT5G33290, AT5G34780, AT5G37740, AT5G38420, AT5G38430, AT5G38895, AT5G39410, AT5G39580, AT5G39710, AT5G40240, AT5G40760, AT5G41260, AT5G42900, AT5G43630, AT5G43850, AT5G44190, AT5G44380, AT5G44480, AT5G44490, AT5G44910, AT5G45800, AT5G46050, AT5G46220, AT5G46580, AT5G46600, AT5G46860, AT5G46871, AT5G47220, AT5G47360, AT5G47560, AT5G48030, AT5G48180, AT5G48250, AT5G48430, AT5G48850, AT5G48910, AT5G49100, AT5G49740, AT5G49900, AT5G50100, AT5G50200, AT5G51540, AT5G51570, AT5G51720, AT5G51790, AT5G52570, AT5G53110, AT5G53170, AT5G53200, AT5G53970, AT5G54130, AT5G54190, AT5G54470, AT5G54585, AT5G54610, AT5G54630, AT5G54930, AT5G54960, AT5G55050, AT5G55090, AT5G55530, AT5G55570, AT5G55730, AT5G55740, AT5G55790, AT5G56580, AT5G56850, AT5G56860, AT5G56960, AT5G57030, AT5G57110, AT5G57180, AT5G57220, AT5G57240, AT5G57630, AT5G57640, AT5G58600, AT5G58660, AT5G58770, AT5G58870, AT5G59310, AT5G59530, AT5G59570, AT5G59780, AT5G60100, AT5G61030, AT5G61130, AT5G61160, AT5G61350, AT5G61380, AT5G61520, AT5G61560, AT5G61670, AT5G62130, AT5G62140, AT5G62200, AT5G62370, AT5G62720, AT5G62900, AT5G63530, AT5G63630, AT5G63700, AT5G63810, AT5G64170, AT5G64660, AT5G64710, AT5G64840, AT5G64860, AT5G64905, AT5G64940, AT5G65380, AT5G65600, AT5G65820, AT5G66052, AT5G66053, AT5G66270, AT5G66740, AT5G66790, AT5G66960, AT5G67030, AT5G67370, AT5G67385, ATCG00330, ATCG00905, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01130, ATCG01170, ATCG01190, ATCG01300, ATCG01310
## 13 NA
## 14 NA
## 15 AT1G01060, AT1G01190, AT1G01390, AT1G01420, AT1G01520, AT1G01600, AT1G01610, AT1G01640, AT1G02820, AT1G02920, AT1G02930, AT1G03050, AT1G03055, AT1G03300, AT1G03360, AT1G03905, AT1G04220, AT1G04250, AT1G04280, AT1G04530, AT1G04550, AT1G04620, AT1G04770, AT1G05020, AT1G05300, AT1G05560, AT1G05562, AT1G05680, AT1G05710, AT1G06460, AT1G07010, AT1G07160, AT1G07180, AT1G07420, AT1G07490, AT1G08980, AT1G09180, AT1G09820, AT1G09900, AT1G10040, AT1G10070, AT1G10200, AT1G10460, AT1G10710, AT1G10960, AT1G11200, AT1G11362, AT1G11950, AT1G12330, AT1G12370, AT1G12710, AT1G12730, AT1G13080, AT1G13110, AT1G13270, AT1G13730, AT1G13800, AT1G13810, AT1G14150, AT1G14170, AT1G14345, AT1G14540, AT1G14840, AT1G14870, AT1G15125, AT1G15290, AT1G15510, AT1G15550, AT1G15670, AT1G15870, AT1G15890, AT1G16090, AT1G16350, AT1G16390, AT1G17050, AT1G18800, AT1G19140, AT1G19150, AT1G19370, AT1G19450, AT1G19700, AT1G20010, AT1G20620, AT1G20630, AT1G20840, AT1G21100, AT1G21110, AT1G21120, AT1G21130, AT1G21500, AT1G22370, AT1G22480, AT1G22490, AT1G22590, AT1G22770, AT1G23100, AT1G23410, AT1G23740, AT1G25320, AT1G25390, AT1G25480, AT1G26220, AT1G26380, AT1G26390, AT1G26410, AT1G26420, AT1G26665, AT1G27120, AT1G27480, AT1G27630, AT1G28010, AT1G28050, AT1G28330, AT1G29160, AT1G29660, AT1G30280, AT1G30282, AT1G30420, AT1G30620, AT1G30700, AT1G30755, AT1G30960, AT1G31690, AT1G31950, AT1G32440, AT1G32760, AT1G32900, AT1G33030, AT1G33170, AT1G33410, AT1G34380, AT1G42550, AT1G42970, AT1G44000, AT1G44446, AT1G48100, AT1G48210, AT1G48370, AT1G48480, AT1G48570, AT1G48605, AT1G49010, AT1G49230, AT1G49430, AT1G49490, AT1G49660, AT1G49720, AT1G50840, AT1G51310, AT1G51610, AT1G51620, AT1G51850, AT1G51890, AT1G51940, AT1G52200, AT1G52830, AT1G53090, AT1G53100, AT1G54500, AT1G55260, AT1G55450, AT1G56140, AT1G56145, AT1G56150, AT1G56300, AT1G56470, AT1G57630, AT1G58520, AT1G59700, AT1G59950, AT1G60730, AT1G61300, AT1G61360, AT1G61420, AT1G61550, AT1G61560, AT1G62170, AT1G62180, AT1G62630, AT1G62720, AT1G62750, AT1G62760, AT1G62960, AT1G63180, AT1G63250, AT1G64110, AT1G64220, AT1G64500, AT1G64600, AT1G64670, AT1G64760, AT1G64770, AT1G64780, AT1G64880, AT1G64900, AT1G64970, AT1G65060, AT1G65070, AT1G65080, AT1G65820, AT1G65920, AT1G66130, AT1G66330, AT1G66540, AT1G66700, AT1G66725, AT1G66780, AT1G66840, AT1G67370, AT1G67750, AT1G67970, AT1G67980, AT1G68050, AT1G69200, AT1G69520, AT1G70000, AT1G70250, AT1G70580, AT1G70800, AT1G71000, AT1G71400, AT1G71520, AT1G71850, AT1G72040, AT1G72270, AT1G72330, AT1G72416, AT1G72770, AT1G73320, AT1G73600, AT1G73602, AT1G73870, AT1G73890, AT1G74010, AT1G74070, AT1G74290, AT1G74560, AT1G75100, AT1G75280, AT1G75830, AT1G76240, AT1G76470, AT1G76790, AT1G77380, AT1G77580, AT1G77810, AT1G78290, AT1G78370, AT1G78510, AT1G78930, AT1G79440, AT1G79460, AT1G79680, AT1G80270, AT1G80760, AT2G01280, AT2G01540, AT2G01890, AT2G02010, AT2G02100, AT2G02150, AT2G02220, AT2G02230, AT2G02930, AT2G03550, AT2G04030, AT2G04039, AT2G05630, AT2G11890, AT2G14170, AT2G14880, AT2G15890, AT2G16365, AT2G17740, AT2G18230, AT2G18330, AT2G18560, AT2G19190, AT2G19450, AT2G19670, AT2G20020, AT2G20585, AT2G21130, AT2G21187, AT2G21320, AT2G21330, AT2G21660, AT2G22240, AT2G22450, AT2G22970, AT2G22980, AT2G23030, AT2G23290, AT2G23340, AT2G23430, AT2G23672, AT2G24120, AT2G24440, AT2G24540, AT2G24545, AT2G24570, AT2G24580, AT2G24645, AT2G24762, AT2G24820, AT2G25530, AT2G25680, AT2G25730, AT2G25930, AT2G26080, AT2G26560, AT2G26650, AT2G26692, AT2G27200, AT2G27420, AT2G28190, AT2G28790, AT2G28930, AT2G29090, AT2G29720, AT2G29740, AT2G30100, AT2G30150, AT2G30395, AT2G30424, AT2G30520, AT2G30750, AT2G30770, AT2G31010, AT2G31380, AT2G31750, AT2G31751, AT2G32150, AT2G32530, AT2G32540, AT2G33830, AT2G35760, AT2G35950, AT2G35980, AT2G36000, AT2G36390, AT2G36590, AT2G36750, AT2G36800, AT2G37240, AT2G37430, AT2G37460, AT2G37630, AT2G37940, AT2G37970, AT2G38750, AT2G38760, AT2G38860, AT2G39200, AT2G39380, AT2G39400, AT2G39518, AT2G39530, AT2G39660, AT2G39710, AT2G39730, AT2G39900, AT2G39920, AT2G40080, AT2G40110, AT2G40340, AT2G41050, AT2G41250, AT2G41290, AT2G41660, AT2G42360, AT2G42710, AT2G43100, AT2G43590, AT2G43620, AT2G43650, AT2G43710, AT2G43940, AT2G44080, AT2G45340, AT2G46670, AT2G46790, AT2G46810, AT2G46830, AT2G47390, AT2G47450, AT2G47485, AT2G47630, AT3G01060, AT3G01140, AT3G01142, AT3G01180, AT3G01440, AT3G02800, AT3G02830, AT3G04140, AT3G04420, AT3G04950, AT3G05390, AT3G06520, AT3G06750, AT3G06920, AT3G07650, AT3G07750, AT3G07770, AT3G09190, AT3G09390, AT3G09405, AT3G09600, AT3G09650, AT3G10040, AT3G10110, AT3G10410, AT3G10525, AT3G11020, AT3G11110, AT3G11230, AT3G12030, AT3G12220, AT3G12230, AT3G12320, AT3G13450, AT3G13470, AT3G13710, AT3G14360, AT3G14810, AT3G14900, AT3G15354, AT3G15356, AT3G15540, AT3G15620, AT3G15850, AT3G15990, AT3G16180, AT3G16360, AT3G16520, AT3G16530, AT3G16565, AT3G17170, AT3G17640, AT3G17840, AT3G18080, AT3G18750, AT3G19000, AT3G19210, AT3G19260, AT3G19440, AT3G19450, AT3G19480, AT3G20410, AT3G21240, AT3G21390, AT3G21460, AT3G21470, AT3G21890, AT3G22120, AT3G22121, AT3G22150, AT3G22460, AT3G23090, AT3G23210, AT3G23280, AT3G23510, AT3G23930, AT3G23940, AT3G24170, AT3G24190, AT3G24460, AT3G25030, AT3G25670, AT3G26570, AT3G26680, AT3G26830, AT3G27210, AT3G27300, AT3G28040, AT3G28540, AT3G30460, AT3G30720, AT3G43670, AT3G43790, AT3G43960, AT3G44020, AT3G44300, AT3G44730, AT3G45060, AT3G45390, AT3G46090, AT3G46440, AT3G46640, AT3G46690, AT3G46900, AT3G47070, AT3G47360, AT3G47420, AT3G47430, AT3G47800, AT3G47860, AT3G48280, AT3G48560, AT3G48690, AT3G49110, AT3G49120, AT3G49130, AT3G49240, AT3G49470, AT3G50120, AT3G50210, AT3G50480, AT3G50500, AT3G50810, AT3G51330, AT3G51420, AT3G51895, AT3G52450, AT3G52720, AT3G52920, AT3G53700, AT3G53920, AT3G54150, AT3G54220, AT3G54390, AT3G54490, AT3G54500, AT3G54720, AT3G54900, AT3G55150, AT3G55450, AT3G56080, AT3G56160, AT3G56290, AT3G56300, AT3G56330, AT3G56570, AT3G57020, AT3G57040, AT3G57180, AT3G57190, AT3G57400, AT3G57550, AT3G57700, AT3G58570, AT3G58840, AT3G58990, AT3G59220, AT3G59330, AT3G59350, AT3G59400, AT3G59700, AT3G59900, AT3G61160, AT3G61220, AT3G61780, AT3G61880, AT3G62150, AT3G63200, AT3G63380, AT3G63530, AT4G00050, AT4G00165, AT4G00360, AT4G01037, AT4G01070, AT4G01080, AT4G01130, AT4G01250, AT4G01750, AT4G02380, AT4G02520, AT4G02630, AT4G02990, AT4G03460, AT4G04020, AT4G04330, AT4G04610, AT4G05110, AT4G09020, AT4G09350, AT4G09650, AT4G10120, AT4G10600, AT4G11175, AT4G11470, AT4G11521, AT4G11600, AT4G12390, AT4G12470, AT4G12480, AT4G12830, AT4G12880, AT4G12980, AT4G14270, AT4G14440, AT4G14690, AT4G15210, AT4G15233, AT4G15248, AT4G15430, AT4G15480, AT4G15550, AT4G16690, AT4G16820, AT4G17140, AT4G17180, AT4G17680, AT4G17880, AT4G17970, AT4G18430, AT4G18800, AT4G19120, AT4G19170, AT4G19410, AT4G19810, AT4G19880, AT4G20090, AT4G20360, AT4G21990, AT4G22710, AT4G22770, AT4G23280, AT4G23550, AT4G23680, AT4G23810, AT4G24540, AT4G24670, AT4G25290, AT4G25810, AT4G25900, AT4G26270, AT4G26600, AT4G26670, AT4G26800, AT4G26850, AT4G27030, AT4G27130, AT4G27700, AT4G27950, AT4G27970, AT4G28550, AT4G28660, AT4G28700, AT4G28730, AT4G28740, AT4G28780, AT4G29600, AT4G30470, AT4G30610, AT4G30690, AT4G30960, AT4G31050, AT4G31210, AT4G31390, AT4G31550, AT4G31620, AT4G31870, AT4G32340, AT4G32770, AT4G33010, AT4G33160, AT4G33980, AT4G34580, AT4G34610, AT4G34770, AT4G34900, AT4G34950, AT4G34990, AT4G35090, AT4G35180, AT4G35380, AT4G36580, AT4G36760, AT4G36770, AT4G36950, AT4G37390, AT4G37410, AT4G37650, AT4G37800, AT4G37925, AT4G38000, AT4G38410, AT4G38540, AT4G38545, AT4G38680, AT4G38960, AT4G38970, AT4G39230, AT4G39270, AT4G39330, AT4G39510, AT4G39800, AT4G40070, AT5G01075, AT5G01260, AT5G01410, AT5G01820, AT5G02050, AT5G02180, AT5G02230, AT5G02260, AT5G02540, AT5G02780, AT5G02830, AT5G03555, AT5G03760, AT5G05190, AT5G05270, AT5G05410, AT5G05580, AT5G06550, AT5G06690, AT5G08380, AT5G08490, AT5G08610, AT5G08720, AT5G09500, AT5G09760, AT5G09840, AT5G10470, AT5G10520, AT5G10820, AT5G10860, AT5G11150, AT5G11210, AT5G11670, AT5G12080, AT5G12110, AT5G13400, AT5G13730, AT5G13770, AT5G14580, AT5G14610, AT5G14740, AT5G15030, AT5G15640, AT5G15840, AT5G15845, AT5G15850, AT5G15948, AT5G15950, AT5G16340, AT5G16530, AT5G17050, AT5G17170, AT5G17300, AT5G18470, AT5G18525, AT5G18570, AT5G18670, AT5G19300, AT5G19730, AT5G19850, AT5G20070, AT5G20220, AT5G20225, AT5G20380, AT5G20950, AT5G21100, AT5G22390, AT5G22640, AT5G23070, AT5G23235, AT5G23240, AT5G23660, AT5G23730, AT5G23760, AT5G24030, AT5G24110, AT5G24120, AT5G24150, AT5G24240, AT5G24280, AT5G24380, AT5G24470, AT5G24580, AT5G24660, AT5G24850, AT5G25120, AT5G25130, AT5G25140, AT5G25340, AT5G25590, AT5G26260, AT5G26340, AT5G26570, AT5G27760, AT5G28450, AT5G33290, AT5G34780, AT5G37740, AT5G38420, AT5G38430, AT5G38895, AT5G39410, AT5G39580, AT5G39710, AT5G40240, AT5G40760, AT5G41260, AT5G42900, AT5G43630, AT5G43850, AT5G44190, AT5G44380, AT5G44480, AT5G44490, AT5G44910, AT5G45800, AT5G46050, AT5G46220, AT5G46580, AT5G46600, AT5G46860, AT5G46871, AT5G47220, AT5G47360, AT5G47560, AT5G48030, AT5G48180, AT5G48250, AT5G48430, AT5G48850, AT5G48910, AT5G49740, AT5G49900, AT5G50100, AT5G50200, AT5G51540, AT5G51570, AT5G51720, AT5G51790, AT5G52570, AT5G53110, AT5G53170, AT5G53200, AT5G53970, AT5G54130, AT5G54190, AT5G54470, AT5G54610, AT5G54630, AT5G54960, AT5G55050, AT5G55090, AT5G55530, AT5G55570, AT5G55730, AT5G55740, AT5G56580, AT5G56850, AT5G56860, AT5G56960, AT5G57030, AT5G57110, AT5G57180, AT5G57220, AT5G57240, AT5G57630, AT5G57640, AT5G58600, AT5G58660, AT5G58770, AT5G58870, AT5G59310, AT5G59530, AT5G59570, AT5G59780, AT5G60100, AT5G61030, AT5G61130, AT5G61160, AT5G61350, AT5G61380, AT5G61520, AT5G61560, AT5G61670, AT5G62130, AT5G62140, AT5G62370, AT5G62900, AT5G63530, AT5G63630, AT5G63700, AT5G63810, AT5G64170, AT5G64660, AT5G64710, AT5G64840, AT5G64860, AT5G64905, AT5G64940, AT5G65380, AT5G65600, AT5G65820, AT5G66053, AT5G66740, AT5G66790, AT5G66960, AT5G67030, AT5G67370, AT5G67385, ATCG00330, ATCG00905, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01130, ATCG01170, ATCG01190, ATCG01300, ATCG01310
## 16 NA
## 17 NA
## 18 AT1G01060, AT1G01190, AT1G01390, AT1G01420, AT1G01520, AT1G01600, AT1G01610, AT1G01640, AT1G02710, AT1G02820, AT1G02920, AT1G02930, AT1G03050, AT1G03055, AT1G03300, AT1G03360, AT1G03905, AT1G04220, AT1G04250, AT1G04280, AT1G04530, AT1G04550, AT1G04620, AT1G04660, AT1G04770, AT1G04990, AT1G05020, AT1G05300, AT1G05560, AT1G05562, AT1G05680, AT1G05710, AT1G06460, AT1G07010, AT1G07040, AT1G07050, AT1G07160, AT1G07180, AT1G07420, AT1G07490, AT1G08610, AT1G08980, AT1G09180, AT1G09820, AT1G09900, AT1G10040, AT1G10070, AT1G10200, AT1G10460, AT1G10710, AT1G10960, AT1G10990, AT1G11200, AT1G11362, AT1G11925, AT1G11950, AT1G12330, AT1G12370, AT1G12710, AT1G12730, AT1G13030, AT1G13080, AT1G13110, AT1G13270, AT1G13650, AT1G13730, AT1G13800, AT1G14150, AT1G14170, AT1G14345, AT1G14540, AT1G14840, AT1G14870, AT1G15125, AT1G15290, AT1G15510, AT1G15550, AT1G15670, AT1G15870, AT1G15890, AT1G16090, AT1G16350, AT1G16390, AT1G16730, AT1G17050, AT1G17665, AT1G18800, AT1G19130, AT1G19140, AT1G19150, AT1G19370, AT1G19450, AT1G19700, AT1G20010, AT1G20620, AT1G20630, AT1G20840, AT1G21100, AT1G21110, AT1G21120, AT1G21130, AT1G21500, AT1G22180, AT1G22370, AT1G22480, AT1G22490, AT1G22590, AT1G22770, AT1G22850, AT1G23100, AT1G23410, AT1G23740, AT1G24148, AT1G25320, AT1G25390, AT1G25480, AT1G26220, AT1G26380, AT1G26390, AT1G26410, AT1G26420, AT1G26665, AT1G26761, AT1G27020, AT1G27120, AT1G27480, AT1G27630, AT1G28010, AT1G28050, AT1G28330, AT1G29160, AT1G29600, AT1G29660, AT1G30280, AT1G30282, AT1G30420, AT1G30620, AT1G30700, AT1G30755, AT1G30960, AT1G31690, AT1G31920, AT1G31950, AT1G32440, AT1G32760, AT1G32900, AT1G33030, AT1G33170, AT1G33410, AT1G34380, AT1G42550, AT1G42970, AT1G44000, AT1G44446, AT1G48100, AT1G48200, AT1G48210, AT1G48370, AT1G48480, AT1G48570, AT1G48605, AT1G49010, AT1G49230, AT1G49430, AT1G49490, AT1G49660, AT1G49720, AT1G50840, AT1G51080, AT1G51100, AT1G51310, AT1G51610, AT1G51620, AT1G51850, AT1G51890, AT1G51920, AT1G51940, AT1G52200, AT1G52830, AT1G53035, AT1G53090, AT1G53100, AT1G54500, AT1G55260, AT1G55450, AT1G55960, AT1G56140, AT1G56145, AT1G56150, AT1G56300, AT1G56470, AT1G57630, AT1G58520, AT1G59700, AT1G59950, AT1G60730, AT1G61300, AT1G61360, AT1G61420, AT1G61550, AT1G61560, AT1G62170, AT1G62180, AT1G62630, AT1G62720, AT1G62750, AT1G62760, AT1G62960, AT1G63180, AT1G63250, AT1G64110, AT1G64220, AT1G64500, AT1G64600, AT1G64670, AT1G64680, AT1G64760, AT1G64770, AT1G64780, AT1G64880, AT1G64900, AT1G64970, AT1G65060, AT1G65070, AT1G65080, AT1G65490, AT1G65820, AT1G65920, AT1G66130, AT1G66330, AT1G66540, AT1G66700, AT1G66725, AT1G66780, AT1G66840, AT1G67370, AT1G67590, AT1G67750, AT1G67970, AT1G67980, AT1G68050, AT1G68440, AT1G69200, AT1G69520, AT1G70000, AT1G70220, AT1G70250, AT1G70580, AT1G71000, AT1G71400, AT1G71520, AT1G71850, AT1G72040, AT1G72270, AT1G72330, AT1G72416, AT1G72645, AT1G72770, AT1G73320, AT1G73600, AT1G73602, AT1G73870, AT1G73890, AT1G74010, AT1G74070, AT1G74290, AT1G74560, AT1G75100, AT1G75280, AT1G75830, AT1G76240, AT1G76470, AT1G76790, AT1G77380, AT1G77580, AT1G77810, AT1G77855, AT1G78290, AT1G78370, AT1G78510, AT1G78930, AT1G79440, AT1G79460, AT1G79680, AT1G80270, AT1G80760, AT2G01280, AT2G01540, AT2G01890, AT2G02010, AT2G02100, AT2G02150, AT2G02220, AT2G02230, AT2G02410, AT2G02930, AT2G03550, AT2G04030, AT2G04039, AT2G04790, AT2G05160, AT2G05630, AT2G05753, AT2G11890, AT2G14170, AT2G14880, AT2G15000, AT2G15890, AT2G16365, AT2G17740, AT2G17972, AT2G18230, AT2G18330, AT2G18560, AT2G19190, AT2G19450, AT2G19670, AT2G20020, AT2G20585, AT2G21130, AT2G21185, AT2G21187, AT2G21320, AT2G21330, AT2G21660, AT2G22240, AT2G22450, AT2G22970, AT2G22980, AT2G23030, AT2G23110, AT2G23290, AT2G23340, AT2G23430, AT2G23670, AT2G23672, AT2G24120, AT2G24440, AT2G24540, AT2G24545, AT2G24570, AT2G24580, AT2G24645, AT2G24762, AT2G24820, AT2G25530, AT2G25680, AT2G25730, AT2G25930, AT2G26080, AT2G26560, AT2G26650, AT2G26692, AT2G27200, AT2G27420, AT2G28190, AT2G28790, AT2G28930, AT2G29090, AT2G29720, AT2G29740, AT2G30100, AT2G30150, AT2G30395, AT2G30424, AT2G30520, AT2G30750, AT2G30760, AT2G30770, AT2G31010, AT2G31380, AT2G31750, AT2G31751, AT2G32150, AT2G32530, AT2G32540, AT2G33250, AT2G33830, AT2G33855, AT2G35760, AT2G35950, AT2G35980, AT2G36000, AT2G36390, AT2G36590, AT2G36750, AT2G36800, AT2G36815, AT2G37240, AT2G37430, AT2G37460, AT2G37630, AT2G37940, AT2G37970, AT2G38465, AT2G38750, AT2G38760, AT2G38860, AT2G39200, AT2G39380, AT2G39400, AT2G39518, AT2G39530, AT2G39660, AT2G39710, AT2G39730, AT2G39900, AT2G39920, AT2G40080, AT2G40110, AT2G40113, AT2G40340, AT2G41050, AT2G41250, AT2G41290, AT2G41660, AT2G42360, AT2G42710, AT2G42975, AT2G43100, AT2G43590, AT2G43620, AT2G43650, AT2G43710, AT2G43940, AT2G44080, AT2G45340, AT2G46670, AT2G46790, AT2G46810, AT2G46830, AT2G46940, AT2G47370, AT2G47390, AT2G47450, AT2G47485, AT2G47630, AT3G01060, AT3G01140, AT3G01142, AT3G01180, AT3G01440, AT3G02800, AT3G02830, AT3G04140, AT3G04420, AT3G04950, AT3G05390, AT3G06145, AT3G06520, AT3G06750, AT3G06920, AT3G07310, AT3G07640, AT3G07650, AT3G07750, AT3G07770, AT3G09160, AT3G09162, AT3G09190, AT3G09390, AT3G09405, AT3G09600, AT3G09650, AT3G10040, AT3G10110, AT3G10410, AT3G10525, AT3G11020, AT3G11090, AT3G11110, AT3G11230, AT3G12030, AT3G12220, AT3G12230, AT3G12320, AT3G13450, AT3G13470, AT3G13700, AT3G13710, AT3G14360, AT3G14810, AT3G14900, AT3G15354, AT3G15356, AT3G15518, AT3G15540, AT3G15620, AT3G15850, AT3G15990, AT3G16180, AT3G16360, AT3G16520, AT3G16530, AT3G16565, AT3G17160, AT3G17170, AT3G17640, AT3G17840, AT3G18080, AT3G18750, AT3G19000, AT3G19210, AT3G19260, AT3G19440, AT3G19450, AT3G19480, AT3G19615, AT3G20410, AT3G21240, AT3G21390, AT3G21460, AT3G21470, AT3G21890, AT3G22120, AT3G22121, AT3G22150, AT3G22235, AT3G22460, AT3G23090, AT3G23210, AT3G23280, AT3G23510, AT3G23930, AT3G23940, AT3G24170, AT3G24190, AT3G24460, AT3G25030, AT3G25670, AT3G26570, AT3G26670, AT3G26680, AT3G26740, AT3G26830, AT3G27210, AT3G27300, AT3G27350, AT3G27415, AT3G27416, AT3G28040, AT3G28370, AT3G28540, AT3G30460, AT3G30720, AT3G43670, AT3G43790, AT3G43960, AT3G44020, AT3G44300, AT3G44730, AT3G45060, AT3G45390, AT3G46090, AT3G46440, AT3G46640, AT3G46690, AT3G46900, AT3G47070, AT3G47360, AT3G47420, AT3G47430, AT3G47800, AT3G47860, AT3G48280, AT3G48490, AT3G48560, AT3G48660, AT3G48690, AT3G49110, AT3G49120, AT3G49130, AT3G49240, AT3G49470, AT3G50120, AT3G50210, AT3G50480, AT3G50500, AT3G50685, AT3G50810, AT3G51330, AT3G51420, AT3G51750, AT3G51895, AT3G52450, AT3G52720, AT3G52920, AT3G53700, AT3G53920, AT3G54150, AT3G54220, AT3G54390, AT3G54490, AT3G54500, AT3G54720, AT3G54900, AT3G55150, AT3G55450, AT3G56080, AT3G56160, AT3G56290, AT3G56300, AT3G56330, AT3G56500, AT3G56570, AT3G57020, AT3G57040, AT3G57180, AT3G57190, AT3G57400, AT3G57550, AT3G57700, AT3G58570, AT3G58840, AT3G58990, AT3G59220, AT3G59330, AT3G59350, AT3G59400, AT3G59700, AT3G59900, AT3G61160, AT3G61220, AT3G61780, AT3G61880, AT3G62150, AT3G63160, AT3G63200, AT3G63380, AT3G63530, AT4G00050, AT4G00165, AT4G00360, AT4G01037, AT4G01070, AT4G01080, AT4G01130, AT4G01250, AT4G01535, AT4G01750, AT4G02380, AT4G02520, AT4G02630, AT4G02990, AT4G03460, AT4G03600, AT4G04020, AT4G04330, AT4G04610, AT4G05110, AT4G09020, AT4G09350, AT4G09650, AT4G10120, AT4G10600, AT4G10620, AT4G11175, AT4G11470, AT4G11521, AT4G11600, AT4G12390, AT4G12470, AT4G12480, AT4G12830, AT4G12880, AT4G12980, AT4G13800, AT4G14270, AT4G14440, AT4G14690, AT4G15210, AT4G15233, AT4G15248, AT4G15430, AT4G15480, AT4G15550, AT4G15810, AT4G16140, AT4G16146, AT4G16400, AT4G16410, AT4G16690, AT4G16820, AT4G16980, AT4G17140, AT4G17180, AT4G17680, AT4G17880, AT4G17970, AT4G18430, AT4G18540, AT4G18800, AT4G19120, AT4G19170, AT4G19390, AT4G19410, AT4G19810, AT4G19880, AT4G20000, AT4G20090, AT4G20360, AT4G21880, AT4G21990, AT4G22710, AT4G22770, AT4G23280, AT4G23550, AT4G23770, AT4G23810, AT4G24540, AT4G24670, AT4G25290, AT4G25780, AT4G25810, AT4G25900, AT4G26270, AT4G26600, AT4G26670, AT4G26800, AT4G26850, AT4G27030, AT4G27130, AT4G27700, AT4G27950, AT4G27970, AT4G28150, AT4G28550, AT4G28660, AT4G28700, AT4G28730, AT4G28740, AT4G28780, AT4G29600, AT4G30470, AT4G30610, AT4G30690, AT4G30960, AT4G31050, AT4G31210, AT4G31390, AT4G31550, AT4G31620, AT4G31870, AT4G32340, AT4G32770, AT4G33010, AT4G33160, AT4G33560, AT4G33980, AT4G33985, AT4G34580, AT4G34610, AT4G34630, AT4G34770, AT4G34900, AT4G34950, AT4G34990, AT4G35090, AT4G35180, AT4G35380, AT4G36580, AT4G36760, AT4G36770, AT4G36950, AT4G37030, AT4G37390, AT4G37409, AT4G37410, AT4G37650, AT4G37800, AT4G37925, AT4G38000, AT4G38060, AT4G38410, AT4G38540, AT4G38545, AT4G38680, AT4G38960, AT4G38970, AT4G39230, AT4G39270, AT4G39330, AT4G39470, AT4G39510, AT4G39800, AT4G40070, AT5G01015, AT5G01075, AT5G01260, AT5G01410, AT5G01820, AT5G02050, AT5G02160, AT5G02180, AT5G02230, AT5G02260, AT5G02540, AT5G02780, AT5G02830, AT5G02950, AT5G03460, AT5G03555, AT5G03760, AT5G05190, AT5G05270, AT5G05410, AT5G05580, AT5G06550, AT5G06690, AT5G06790, AT5G08380, AT5G08490, AT5G08610, AT5G08720, AT5G08760, AT5G09500, AT5G09760, AT5G09840, AT5G10150, AT5G10470, AT5G10520, AT5G10820, AT5G10860, AT5G11150, AT5G11210, AT5G11670, AT5G12080, AT5G12110, AT5G12880, AT5G12930, AT5G13400, AT5G13730, AT5G13770, AT5G13920, AT5G14350, AT5G14560, AT5G14580, AT5G14610, AT5G14740, AT5G15030, AT5G15600, AT5G15640, AT5G15840, AT5G15845, AT5G15850, AT5G15948, AT5G15950, AT5G16340, AT5G16380, AT5G16530, AT5G17050, AT5G17170, AT5G17300, AT5G18470, AT5G18525, AT5G18540, AT5G18570, AT5G18670, AT5G18690, AT5G19300, AT5G19730, AT5G19850, AT5G19970, AT5G20070, AT5G20220, AT5G20225, AT5G20380, AT5G20950, AT5G21100, AT5G22390, AT5G22640, AT5G23070, AT5G23235, AT5G23240, AT5G23575, AT5G23660, AT5G23730, AT5G23750, AT5G23760, AT5G24030, AT5G24105, AT5G24110, AT5G24120, AT5G24150, AT5G24165, AT5G24240, AT5G24280, AT5G24380, AT5G24470, AT5G24580, AT5G24660, AT5G24850, AT5G25120, AT5G25130, AT5G25140, AT5G25340, AT5G25590, AT5G25630, AT5G26260, AT5G26340, AT5G26570, AT5G27760, AT5G28450, AT5G28500, AT5G33290, AT5G34780, AT5G37740, AT5G38420, AT5G38430, AT5G38895, AT5G39410, AT5G39580, AT5G39710, AT5G40240, AT5G40760, AT5G41260, AT5G42900, AT5G43400, AT5G43630, AT5G43850, AT5G44010, AT5G44190, AT5G44380, AT5G44480, AT5G44490, AT5G44910, AT5G45800, AT5G46050, AT5G46220, AT5G46580, AT5G46600, AT5G46860, AT5G46871, AT5G47220, AT5G47360, AT5G47560, AT5G48030, AT5G48180, AT5G48250, AT5G48430, AT5G48850, AT5G48910, AT5G49100, AT5G49740, AT5G49900, AT5G50100, AT5G50200, AT5G51540, AT5G51570, AT5G51720, AT5G51790, AT5G52570, AT5G53110, AT5G53170, AT5G53200, AT5G53970, AT5G54130, AT5G54190, AT5G54470, AT5G54610, AT5G54630, AT5G54930, AT5G54960, AT5G55050, AT5G55090, AT5G55530, AT5G55570, AT5G55730, AT5G55740, AT5G55790, AT5G56580, AT5G56850, AT5G56860, AT5G56960, AT5G57030, AT5G57110, AT5G57180, AT5G57220, AT5G57240, AT5G57630, AT5G57640, AT5G58600, AT5G58660, AT5G58770, AT5G58870, AT5G59310, AT5G59530, AT5G59570, AT5G59780, AT5G60100, AT5G61030, AT5G61130, AT5G61160, AT5G61350, AT5G61380, AT5G61520, AT5G61560, AT5G61670, AT5G62130, AT5G62140, AT5G62200, AT5G62370, AT5G62720, AT5G62900, AT5G63530, AT5G63630, AT5G63700, AT5G63810, AT5G64170, AT5G64660, AT5G64710, AT5G64840, AT5G64860, AT5G64905, AT5G64940, AT5G65380, AT5G65600, AT5G65609, AT5G65820, AT5G66052, AT5G66053, AT5G66740, AT5G66790, AT5G66960, AT5G67030, AT5G67370, AT5G67385, ATCG00330, ATCG00905, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01130, ATCG01170, ATCG01190, ATCG01300, ATCG01310, ATMG00030, ATMG00050, ATMG01130
## 19 NA
## 20 NA
## 21 AT1G02710, AT1G04620, AT1G07050, AT1G10960, AT1G17665, AT1G21500, AT1G55260, AT1G62170, AT1G62180, AT1G64500, AT1G68050, AT2G21320, AT2G24762, AT2G25730, AT2G40080, AT2G46830, AT3G07640, AT3G07650, AT3G09600, AT3G19450, AT3G53830, AT3G56290, AT3G61220, AT3G63200, AT4G01130, AT4G04330, AT4G12390, AT4G26670, AT4G33980, AT4G37650, AT5G02150, AT5G11150, AT5G11550, AT5G12080, AT5G23760, AT5G24120, AT5G24280, AT5G39410, AT5G42900, AT5G47610, AT5G48250, AT5G48570, AT5G54610, AT5G57110, AT5G58770, AT5G59570, AT5G60100, AT5G61380, AT5G62140
## 22 NA
## 23 NA
## 24 AT1G04620, AT1G10960, AT1G21500, AT1G55260, AT1G62170, AT1G62180, AT1G64500, AT1G68050, AT2G21320, AT2G24762, AT2G25730, AT2G40080, AT2G46830, AT3G07650, AT3G09600, AT3G19450, AT3G56290, AT3G61220, AT3G63200, AT4G01130, AT4G04330, AT4G12390, AT4G26670, AT4G33980, AT4G37650, AT5G02150, AT5G11150, AT5G12080, AT5G23760, AT5G24120, AT5G24280, AT5G39410, AT5G42900, AT5G47610, AT5G48250, AT5G48570, AT5G54610, AT5G57110, AT5G58770, AT5G59570, AT5G60100, AT5G61380, AT5G62140
## 25 NA
## 26 NA
## 27 AT1G02710, AT1G04620, AT1G07050, AT1G10960, AT1G17665, AT1G21500, AT1G55260, AT1G62170, AT1G62180, AT1G64500, AT1G68050, AT2G21320, AT2G24762, AT2G25730, AT2G40080, AT2G46830, AT3G07640, AT3G07650, AT3G09600, AT3G19450, AT3G56290, AT3G61220, AT3G63200, AT4G01130, AT4G04330, AT4G12390, AT4G26670, AT4G33980, AT4G37650, AT5G02150, AT5G11150, AT5G11550, AT5G12080, AT5G18690, AT5G23760, AT5G24120, AT5G24280, AT5G39410, AT5G42900, AT5G47610, AT5G48250, AT5G48570, AT5G54610, AT5G57110, AT5G58770, AT5G59570, AT5G60100, AT5G61380, AT5G62140
## 28 NA
## 29 NA
## 30 AT1G01010, AT1G01120, AT1G01340, AT1G01370, AT1G01390, AT1G01430, AT1G01480, AT1G01560, AT1G01660, AT1G01680, AT1G01690, AT1G02205, AT1G02220, AT1G02230, AT1G02270, AT1G02310, AT1G02390, AT1G02450, AT1G02470, AT1G02500, AT1G02520, AT1G02610, AT1G02620, AT1G02740, AT1G02820, AT1G02850, AT1G02920, AT1G02930, AT1G03020, AT1G03050, AT1G03130, AT1G03310, AT1G03495, AT1G03600, AT1G03610, AT1G03630, AT1G03660, AT1G03940, AT1G04310, AT1G04600, AT1G04680, AT1G04770, AT1G04870, AT1G05020, AT1G05100, AT1G05170, AT1G05340, AT1G05540, AT1G05570, AT1G05880, AT1G06040, AT1G06180, AT1G06360, AT1G06460, AT1G06620, AT1G06680, AT1G07000, AT1G07050, AT1G07280, AT1G07430, AT1G07440, AT1G07500, AT1G07620, AT1G07900, AT1G08050, AT1G08380, AT1G08450, AT1G08550, AT1G08860, AT1G09310, AT1G09340, AT1G09350, AT1G09930, AT1G09932, AT1G10020, AT1G10040, AT1G10150, AT1G10280, AT1G10340, AT1G10760, AT1G10960, AT1G10990, AT1G11130, AT1G11180, AT1G11260, AT1G11290, AT1G11330, AT1G11362, AT1G11380, AT1G11905, AT1G11925, AT1G12090, AT1G12160, AT1G12200, AT1G12210, AT1G12290, AT1G12500, AT1G12710, AT1G12730, AT1G12900, AT1G12940, AT1G13245, AT1G13310, AT1G13330, AT1G13340, AT1G13470, AT1G13520, AT1G13550, AT1G13650, AT1G13700, AT1G13830, AT1G14030, AT1G14150, AT1G14160, AT1G14345, AT1G14480, AT1G14540, AT1G14700, AT1G14720, AT1G14870, AT1G14880, AT1G15040, AT1G15080, AT1G15150, AT1G15160, AT1G15290, AT1G15415, AT1G15520, AT1G15550, AT1G15690, AT1G15790, AT1G15820, AT1G15830, AT1G15980, AT1G15990, AT1G16080, AT1G16090, AT1G16150, AT1G16300, AT1G16400, AT1G16410, AT1G16420, AT1G16670, AT1G16720, AT1G16730, AT1G17100, AT1G17170, AT1G17240, AT1G17340, AT1G17380, AT1G17500, AT1G17600, AT1G17615, AT1G17745, AT1G17750, AT1G17830, AT1G17850, AT1G17970, AT1G18330, AT1G18485, AT1G18570, AT1G18890, AT1G18910, AT1G19020, AT1G19150, AT1G19250, AT1G19450, AT1G19510, AT1G19540, AT1G19715, AT1G19720, AT1G20010, AT1G20020, AT1G20310, AT1G20460, AT1G21240, AT1G21250, AT1G21310, AT1G21370, AT1G21500, AT1G21520, AT1G21525, AT1G21740, AT1G21910, AT1G22190, AT1G22220, AT1G22330, AT1G22360, AT1G22370, AT1G22380, AT1G22400, AT1G22403, AT1G22480, AT1G22490, AT1G22500, AT1G22530, AT1G22550, AT1G22570, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23052, AT1G23200, AT1G23205, AT1G23390, AT1G23400, AT1G23480, AT1G23710, AT1G23740, AT1G23840, AT1G23850, AT1G24095, AT1G24140, AT1G24145, AT1G24150, AT1G25220, AT1G25370, AT1G25400, AT1G25450, AT1G26130, AT1G26150, AT1G26230, AT1G26380, AT1G26390, AT1G26410, AT1G26420, AT1G26800, AT1G27110, AT1G27480, AT1G27770, AT1G27950, AT1G28010, AT1G28330, AT1G28370, AT1G28480, AT1G29090, AT1G29195, AT1G29280, AT1G29290, AT1G29530, AT1G29600, AT1G29640, AT1G29670, AT1G29680, AT1G29715, AT1G30040, AT1G30100, AT1G30190, AT1G30270, AT1G30420, AT1G30520, AT1G30620, AT1G30850, AT1G30900, AT1G31010, AT1G31173, AT1G31290, AT1G31330, AT1G31880, AT1G31920, AT1G32060, AT1G32080, AT1G32330, AT1G32350, AT1G32870, AT1G32940, AT1G32950, AT1G32960, AT1G33030, AT1G33110, AT1G33170, AT1G33240, AT1G33420, AT1G33430, AT1G33560, AT1G33720, AT1G33730, AT1G33760, AT1G33800, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G34750, AT1G35140, AT1G35210, AT1G35230, AT1G35420, AT1G35710, AT1G35910, AT1G36370, AT1G36622, AT1G36675, AT1G37130, AT1G42550, AT1G42980, AT1G43670, AT1G43910, AT1G44000, AT1G44130, AT1G44446, AT1G45010, AT1G45145, AT1G47210, AT1G47370, AT1G47440, AT1G47510, AT1G47580, AT1G47890, AT1G48030, AT1G48315, AT1G48320, AT1G48370, AT1G48605, AT1G48870, AT1G49010, AT1G49050, AT1G49200, AT1G49490, AT1G49650, AT1G49975, AT1G49990, AT1G50040, AT1G50400, AT1G50590, AT1G50732, AT1G51640, AT1G51645, AT1G51660, AT1G51670, AT1G51760, AT1G51805, AT1G51850, AT1G51860, AT1G51890, AT1G51940, AT1G52230, AT1G52315, AT1G52540, AT1G52565, AT1G52770, AT1G52890, AT1G53100, AT1G53160, AT1G53620, AT1G53625, AT1G54000, AT1G54780, AT1G54790, AT1G54820, AT1G54960, AT1G55330, AT1G55370, AT1G55480, AT1G55610, AT1G55790, AT1G56060, AT1G56080, AT1G56165, AT1G56470, AT1G56540, AT1G56550, AT1G56600, AT1G56670, AT1G56720, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G58300, AT1G59590, AT1G60160, AT1G60550, AT1G60590, AT1G60690, AT1G60730, AT1G60800, AT1G61140, AT1G61160, AT1G61215, AT1G61250, AT1G61260, AT1G61300, AT1G61340, AT1G61370, AT1G61420, AT1G61520, AT1G61550, AT1G61640, AT1G61800, AT1G61810, AT1G62170, AT1G62180, AT1G62422, AT1G62510, AT1G62560, AT1G62580, AT1G62630, AT1G63040, AT1G63090, AT1G63245, AT1G63570, AT1G63720, AT1G63750, AT1G63820, AT1G63840, AT1G63930, AT1G64355, AT1G64400, AT1G64405, AT1G64610, AT1G64625, AT1G64680, AT1G64770, AT1G64900, AT1G65230, AT1G65390, AT1G65483, AT1G65500, AT1G65590, AT1G65690, AT1G65870, AT1G66090, AT1G66130, AT1G66230, AT1G66250, AT1G66390, AT1G66460, AT1G66550, AT1G66590, AT1G66600, AT1G66700, AT1G66780, AT1G66840, AT1G66880, AT1G66930, AT1G66960, AT1G67000, AT1G67060, AT1G67070, AT1G67265, AT1G67360, AT1G67520, AT1G67590, AT1G67630, AT1G67635, AT1G67650, AT1G67740, AT1G67800, AT1G67810, AT1G67820, AT1G67850, AT1G67910, 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AT1G75690, AT1G75770, AT1G75900, AT1G75960, AT1G76040, AT1G76080, AT1G76100, AT1G76110, AT1G76620, AT1G76690, AT1G76760, AT1G76970, AT1G76980, AT1G77090, AT1G77210, AT1G77500, AT1G77630, AT1G77640, AT1G77660, AT1G77760, AT1G77810, AT1G77890, AT1G78000, AT1G78100, AT1G78190, AT1G78380, AT1G78410, AT1G78450, AT1G78600, AT1G78780, AT1G78990, AT1G78995, AT1G79330, AT1G79400, AT1G79450, AT1G79680, AT1G79770, AT1G79780, AT1G80110, AT1G80280, AT1G80300, AT1G80440, AT1G80450, AT1G80590, AT1G80610, AT1G80630, AT1G80830, AT1G80840, AT1G80920, AT2G01180, AT2G01300, AT2G01590, AT2G01755, AT2G01760, AT2G01818, AT2G01850, AT2G01870, AT2G01890, AT2G01918, AT2G02070, AT2G02310, AT2G02340, AT2G02350, AT2G02710, AT2G02930, AT2G02950, AT2G02990, AT2G03090, AT2G03310, AT2G03420, AT2G03440, AT2G03505, AT2G03550, AT2G03710, AT2G04040, AT2G04050, AT2G04070, AT2G04400, AT2G04430, AT2G04450, AT2G04790, AT2G04795, AT2G05070, AT2G05100, AT2G05160, AT2G05940, AT2G05995, AT2G06520, AT2G07687, AT2G12550, AT2G13130, AT2G13360, AT2G13790, AT2G13810, AT2G14290, AT2G14620, AT2G14878, AT2G15020, AT2G15090, AT2G15890, AT2G15970, AT2G16060, AT2G16365, AT2G16630, AT2G16660, AT2G16720, AT2G16870, AT2G16900, AT2G17040, AT2G17120, AT2G17220, AT2G17230, AT2G17440, AT2G17500, AT2G17695, AT2G17720, AT2G17780, AT2G18000, AT2G18160, AT2G18162, AT2G18193, AT2G18300, AT2G18560, AT2G18650, AT2G18660, AT2G18690, AT2G18700, AT2G18940, AT2G19190, AT2G19310, AT2G19710, AT2G20110, AT2G20142, AT2G20250, AT2G20562, AT2G20670, AT2G20680, AT2G21130, AT2G21140, AT2G21188, AT2G21320, AT2G21330, AT2G21350, AT2G21470, AT2G21510, AT2G21550, AT2G21780, AT2G21790, AT2G21830, AT2G21970, AT2G22200, AT2G22470, AT2G22810, AT2G22830, AT2G22990, AT2G23100, AT2G23130, AT2G23290, AT2G23590, AT2G23600, AT2G23680, AT2G23810, AT2G23840, AT2G24110, AT2G24285, AT2G24490, AT2G24550, AT2G24580, AT2G24610, AT2G24850, AT2G25130, AT2G25190, AT2G25200, AT2G25240, AT2G25260, AT2G25270, AT2G25440, AT2G25450, AT2G25460, AT2G25520, AT2G25737, AT2G25900, AT2G26080, AT2G26170, AT2G26300, AT2G26390, AT2G26400, AT2G26480, AT2G26710, AT2G26870, AT2G26975, AT2G27420, AT2G28120, AT2G28160, AT2G28210, AT2G28305, AT2G28400, AT2G28570, AT2G28605, AT2G28900, AT2G29090, AT2G29100, AT2G29170, AT2G29280, AT2G29290, AT2G29300, AT2G29310, AT2G29320, AT2G29360, AT2G29400, AT2G29450, AT2G29460, AT2G29630, AT2G29650, AT2G29670, AT2G29720, AT2G29750, AT2G29990, AT2G30070, AT2G30080, AT2G30150, AT2G30390, AT2G30395, AT2G30400, AT2G30420, AT2G30550, AT2G30600, AT2G30615, AT2G30750, AT2G30770, AT2G30930, AT2G31018, AT2G31020, AT2G31270, AT2G31360, AT2G31585, AT2G31790, AT2G31865, AT2G31880, AT2G31990, AT2G32030, AT2G32100, AT2G32130, AT2G32140, AT2G32150, AT2G32179, AT2G32180, AT2G32190, AT2G32200, AT2G32210, AT2G32290, AT2G32430, AT2G32460, AT2G32470, AT2G32480, AT2G32530, AT2G32540, AT2G32560, AT2G32590, AT2G32640, AT2G32960, AT2G33060, AT2G33110, AT2G33255, AT2G33330, AT2G33580, AT2G33735, AT2G34070, AT2G34410, AT2G34420, AT2G34500, AT2G34580, AT2G34600, AT2G34610, AT2G34620, AT2G34650, AT2G34760, AT2G34940, AT2G35260, AT2G35660, AT2G35710, AT2G35760, AT2G35960, AT2G35980, AT2G36026, AT2G36050, AT2G36270, AT2G36580, AT2G36670, AT2G36690, AT2G36830, AT2G36990, AT2G37070, AT2G37100, AT2G37220, AT2G37260, AT2G37440, AT2G37450, AT2G37530, AT2G37540, AT2G37560, AT2G37585, AT2G37710, AT2G37750, AT2G37790, AT2G37890, AT2G37950, AT2G37980, AT2G38210, AT2G38230, AT2G38290, AT2G38340, AT2G38460, AT2G38490, AT2G38500, AT2G38530, AT2G38540, AT2G38790, AT2G38820, AT2G38860, AT2G39110, AT2G39220, AT2G39230, AT2G39320, AT2G39350, AT2G39435, AT2G39520, AT2G39530, AT2G39650, AT2G39730, AT2G39880, AT2G39920, AT2G39980, AT2G40000, AT2G40080, AT2G40095, AT2G40140, AT2G40150, AT2G40330, AT2G40540, AT2G40670, AT2G40740, AT2G40840, AT2G40960, AT2G41010, AT2G41050, AT2G41100, AT2G41380, AT2G41410, AT2G41430, AT2G41480, AT2G41660, AT2G41835, AT2G41880, AT2G41990, AT2G42060, AT2G42320, AT2G42350, AT2G42380, AT2G42485, AT2G42860, AT2G42890, AT2G42950, AT2G43000, AT2G43010, AT2G43050, AT2G43100, AT2G43120, AT2G43140, AT2G43290, AT2G43320, AT2G43550, AT2G43570, AT2G43580, AT2G43590, AT2G43620, AT2G43680, AT2G44290, AT2G44578, AT2G44600, AT2G44910, AT2G44940, AT2G45120, AT2G45180, AT2G45220, AT2G45400, AT2G45560, AT2G45760, AT2G45850, AT2G45920, AT2G46270, AT2G46400, AT2G46410, AT2G46430, AT2G46450, AT2G46620, AT2G46680, AT2G46790, AT2G47000, AT2G47130, AT2G47140, AT2G47440, AT2G47485, AT2G47490, AT2G47670, AT2G47720, AT2G47730, AT2G47800, AT2G47820, AT2G47920, AT2G47950, AT3G01060, AT3G01290, AT3G01440, AT3G01500, AT3G01810, AT3G01820, AT3G01830, AT3G01840, AT3G02050, AT3G02190, AT3G02520, AT3G02610, AT3G02730, AT3G02770, AT3G02800, AT3G02820, AT3G03190, AT3G03310, AT3G03440, AT3G03450, AT3G03480, AT3G03610, AT3G03700, AT3G03702, AT3G03780, AT3G03855, AT3G04060, AT3G04220, AT3G04420, AT3G04445, AT3G04550, AT3G04670, AT3G05330, AT3G05360, AT3G05500, AT3G05625, AT3G05650, AT3G05830, AT3G06070, AT3G06145, AT3G06160, AT3G06490, AT3G06520, AT3G06890, 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AT3G26830, AT3G26840, AT3G27290, AT3G27330, AT3G27560, AT3G27690, AT3G28007, AT3G28070, AT3G28200, AT3G28340, AT3G28420, AT3G28510, AT3G28540, AT3G28570, AT3G28580, AT3G28840, AT3G28930, AT3G29000, AT3G29035, AT3G29185, AT3G29250, AT3G29320, AT3G29575, AT3G29590, AT3G41979, AT3G44020, AT3G44300, AT3G44350, AT3G44400, AT3G44717, AT3G44720, AT3G44830, AT3G44990, AT3G45040, AT3G45330, AT3G45410, AT3G45430, AT3G45620, AT3G45638, AT3G45780, AT3G45970, AT3G46080, AT3G46090, AT3G46130, AT3G46370, AT3G46510, AT3G46520, AT3G46580, AT3G46620, AT3G46630, AT3G46640, AT3G46970, AT3G47050, AT3G47070, AT3G47090, AT3G47430, AT3G47470, AT3G47480, AT3G47500, AT3G47530, AT3G47540, AT3G47730, AT3G47750, AT3G47780, AT3G48020, AT3G48080, AT3G48090, AT3G48100, AT3G48200, AT3G48240, AT3G48280, AT3G48350, AT3G48420, AT3G48460, AT3G48490, AT3G48630, AT3G48640, AT3G48650, AT3G48720, AT3G48780, AT3G48850, AT3G49110, AT3G49470, AT3G49530, AT3G49540, AT3G49570, AT3G49580, AT3G49790, AT3G49930, AT3G50060, AT3G50280, AT3G50470, AT3G50480, AT3G50685, AT3G50760, AT3G50770, AT3G50800, AT3G50840, AT3G50930, AT3G51080, AT3G51330, AT3G51350, AT3G51400, AT3G51420, AT3G51510, AT3G51600, AT3G51860, AT3G52070, AT3G52072, AT3G52310, AT3G52400, AT3G52430, AT3G52470, AT3G52540, AT3G52630, AT3G52840, AT3G52870, AT3G53120, AT3G53150, AT3G53235, AT3G53420, AT3G53470, AT3G53800, AT3G53830, AT3G53980, AT3G54050, AT3G54060, AT3G54150, AT3G54270, AT3G54500, AT3G54600, AT3G54640, AT3G54830, AT3G54890, AT3G55240, AT3G55470, AT3G55500, AT3G55580, AT3G55630, AT3G55730, AT3G55760, AT3G55800, AT3G55880, AT3G55950, AT3G56000, AT3G56160, AT3G56170, AT3G56275, AT3G56290, AT3G56360, AT3G56400, AT3G56500, AT3G56710, AT3G56870, AT3G56891, AT3G57020, AT3G57190, AT3G57260, AT3G57330, AT3G57380, AT3G57460, AT3G57630, AT3G57765, AT3G57880, AT3G57950, AT3G58200, AT3G58620, AT3G58990, AT3G59010, AT3G59060, AT3G59120, AT3G59150, AT3G59250, AT3G59700, AT3G59710, AT3G59750, AT3G59940, AT3G60110, AT3G60164, AT3G60190, AT3G60290, AT3G60390, AT3G60420, AT3G60450, AT3G60470, AT3G60520, AT3G60800, AT3G60966, AT3G60970, AT3G61060, AT3G61190, AT3G61198, AT3G61220, AT3G61390, AT3G61450, AT3G61870, AT3G61960, AT3G62260, AT3G62410, AT3G62550, AT3G62630, AT3G62750, AT3G62760, AT3G62860, AT3G62950, AT3G63010, AT3G63060, AT3G63160, AT3G63380, AT4G00165, AT4G00360, AT4G00370, AT4G00700, AT4G00820, AT4G00850, AT4G01010, AT4G01130, AT4G01200, AT4G01330, AT4G01360, AT4G01430, AT4G01535, AT4G01540, AT4G01670, AT4G01870, AT4G01895, AT4G01920, AT4G01950, AT4G02220, AT4G02280, AT4G02380, AT4G02420, AT4G02520, AT4G02550, AT4G02630, AT4G02660, AT4G02760, AT4G02770, AT4G03400, AT4G03450, AT4G03460, AT4G03510, AT4G04220, AT4G04221, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04540, AT4G04610, AT4G04620, AT4G04745, AT4G04810, AT4G04830, AT4G04840, AT4G05020, AT4G05030, AT4G05070, AT4G05390, AT4G06534, AT4G06536, AT4G07400, AT4G08300, AT4G08555, AT4G08770, AT4G09350, AT4G09570, AT4G09650, AT4G09670, AT4G09760, AT4G09770, AT4G09820, AT4G10120, AT4G10290, AT4G10340, AT4G10380, AT4G10390, AT4G10500, AT4G10860, AT4G10955, AT4G10960, AT4G11170, AT4G11240, AT4G11340, AT4G11350, AT4G11360, AT4G11521, AT4G11655, AT4G11840, AT4G11850, AT4G11890, AT4G12120, AT4G12310, AT4G12320, AT4G12330, AT4G12390, AT4G12420, AT4G12490, AT4G12500, AT4G12720, AT4G12730, AT4G12830, AT4G12900, AT4G12917, AT4G12980, AT4G13000, AT4G13180, AT4G13320, AT4G13340, AT4G13810, AT4G13820, AT4G13830, AT4G13900, AT4G13918, AT4G13920, AT4G14090, AT4G14220, AT4G14270, AT4G14365, AT4G14368, AT4G14370, AT4G14540, AT4G14630, AT4G14690, AT4G14740, AT4G15070, AT4G15200, AT4G15210, AT4G15270, AT4G15280, AT4G15417, AT4G15450, AT4G15630, AT4G15670, AT4G16260, AT4G16350, AT4G16563, AT4G16600, AT4G16740, AT4G16820, AT4G16960, AT4G16980, AT4G17090, AT4G17340, AT4G17360, AT4G17460, AT4G17660, AT4G17670, AT4G17695, AT4G17810, AT4G18210, AT4G18240, AT4G18250, AT4G18360, AT4G18430, AT4G18630, AT4G18980, AT4G19170, AT4G19370, AT4G19420, AT4G19530, AT4G19925, AT4G19970, AT4G20000, AT4G20110, AT4G20140, AT4G20260, AT4G20460, AT4G20820, AT4G20840, AT4G20860, AT4G21280, AT4G21400, AT4G21445, AT4G21500, AT4G21610, AT4G21840, AT4G21850, AT4G21865, AT4G21870, AT4G21903, AT4G21930, AT4G21990, AT4G22070, AT4G22520, AT4G22530, AT4G22590, AT4G22592, AT4G22880, AT4G22980, AT4G23030, AT4G23140, AT4G23150, AT4G23160, AT4G23200, AT4G23210, AT4G23215, AT4G23220, AT4G23250, AT4G23280, AT4G23300, AT4G23310, AT4G23320, AT4G23450, AT4G23470, AT4G23610, AT4G23700, AT4G23890, AT4G24000, AT4G24030, AT4G24090, AT4G24130, AT4G24160, AT4G24230, AT4G24350, AT4G24660, AT4G24670, AT4G24700, AT4G24810, AT4G25050, AT4G25070, AT4G25080, AT4G25390, AT4G25470, AT4G25480, AT4G25810, AT4G25880, AT4G25900, AT4G26060, AT4G26120, AT4G26150, AT4G26270, AT4G26370, AT4G26400, AT4G26470, AT4G26520, AT4G26530, AT4G26910, AT4G26970, AT4G26990, AT4G27030, AT4G27220, AT4G27280, AT4G27290, AT4G27310, AT4G27440, AT4G27450, AT4G27480, AT4G27700, AT4G27720, AT4G27730, AT4G27745, AT4G27820, AT4G27830, AT4G28390, AT4G28490, AT4G28703, AT4G28740, AT4G29190, AT4G29740, AT4G29810, AT4G29905, AT4G30230, AT4G30250, AT4G30280, AT4G30430, AT4G30860, AT4G31230, AT4G31500, AT4G31850, AT4G31860, AT4G32340, AT4G32480, AT4G32770, AT4G32800, AT4G32870, AT4G32980, AT4G33000, AT4G33010, AT4G33040, AT4G33050, AT4G33220, AT4G33300, AT4G33467, AT4G33625, AT4G33660, AT4G33810, AT4G33925, AT4G33930, AT4G33980, AT4G34090, AT4G34135, AT4G34150, AT4G34200, AT4G34220, AT4G34250, AT4G34380, AT4G34390, AT4G34588, AT4G34590, AT4G34710, AT4G34730, AT4G34880, AT4G34900, AT4G34950, AT4G35070, AT4G35090, AT4G35110, AT4G35165, AT4G35170, AT4G35180, AT4G35320, AT4G35380, AT4G35500, AT4G35590, AT4G35600, AT4G35630, AT4G35720, AT4G36040, AT4G36410, AT4G36430, AT4G36530, AT4G36640, AT4G36670, AT4G36700, AT4G36710, AT4G36950, AT4G36988, AT4G36990, AT4G37010, AT4G37030, AT4G37240, AT4G37260, AT4G37370, AT4G37450, AT4G37610, AT4G37640, AT4G37800, AT4G37900, AT4G37925, AT4G38340, AT4G38400, AT4G38430, AT4G38470, AT4G38540, AT4G38545, AT4G38560, AT4G38770, AT4G38940, AT4G39010, AT4G39020, AT4G39030, AT4G39190, AT4G39330, AT4G39404, AT4G39610, AT4G39670, AT4G39710, AT4G39770, AT4G39890, AT4G39950, AT5G01015, AT5G01040, AT5G01050, AT5G01100, AT5G01250, AT5G01340, AT5G01410, AT5G01490, AT5G01520, AT5G01550, AT5G01610, AT5G01640, AT5G01850, AT5G01900, AT5G01980, AT5G02010, AT5G02100, AT5G02120, AT5G02160, AT5G02170, AT5G02180, AT5G02420, AT5G02490, AT5G02780, AT5G02810, AT5G02830, AT5G03210, AT5G03285, AT5G04010, AT5G04720, AT5G04860, AT5G04930, AT5G04950, AT5G05300, AT5G05330, AT5G05440, AT5G05460, AT5G05580, AT5G05740, AT5G05890, AT5G06320, AT5G06330, AT5G06610, AT5G06690, AT5G06760, AT5G06790, AT5G06980, AT5G07580, AT5G07650, AT5G07760, AT5G07780, AT5G07990, AT5G08020, AT5G08150, AT5G08240, AT5G08410, AT5G08720, AT5G09290, AT5G09420, AT5G09440, AT5G09660, AT5G09800, AT5G09820, AT5G09980, AT5G10150, AT5G10380, AT5G10400, AT5G10440, AT5G10470, AT5G10520, AT5G10690, AT5G11030, AT5G11070, AT5G11160, AT5G11210, AT5G11410, AT5G11580, AT5G11610, AT5G11650, AT5G11870, AT5G11920, AT5G12050, AT5G12080, AT5G12110, AT5G12420, AT5G12950, AT5G13190, AT5G13200, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14200, AT5G14360, AT5G14420, AT5G14740, AT5G14760, AT5G14930, AT5G15130, AT5G15350, AT5G16170, AT5G16360, AT5G16370, AT5G16400, AT5G16480, AT5G16810, AT5G17060, AT5G17220, AT5G17330, AT5G17350, AT5G17380, AT5G17670, AT5G17760, AT5G17780, AT5G18270, AT5G18470, AT5G18570, AT5G18670, AT5G19100, AT5G19120, AT5G19140, AT5G19190, AT5G19240, AT5G19730, AT5G19940, AT5G20225, AT5G20250, AT5G20400, AT5G20670, AT5G20700, AT5G20740, AT5G20935, AT5G20960, AT5G21100, AT5G21222, AT5G21430, AT5G21900, AT5G21930, AT5G21940, AT5G22060, AT5G22250, AT5G22380, AT5G22520, AT5G22530, AT5G22545, AT5G22570, AT5G22630, AT5G22640, AT5G22920, AT5G22940, AT5G23010, AT5G23060, AT5G23160, AT5G23210, AT5G23360, AT5G23460, AT5G23850, AT5G23870, AT5G23980, AT5G24000, AT5G24030, AT5G24090, AT5G24120, AT5G24150, AT5G24155, AT5G24160, AT5G24200, AT5G24205, AT5G24206, AT5G24210, AT5G24460, AT5G24470, AT5G24490, AT5G24540, AT5G24660, AT5G24810, AT5G24850, AT5G24910, AT5G25120, AT5G25130, AT5G25140, AT5G25190, AT5G25210, AT5G25240, AT5G25250, AT5G25260, AT5G25451, AT5G25610, AT5G25630, AT5G25820, AT5G25910, AT5G25930, AT5G26170, AT5G26220, AT5G26230, AT5G26690, AT5G26700, AT5G26731, AT5G26820, AT5G26920, AT5G27060, AT5G27290, AT5G27350, AT5G27390, AT5G27610, AT5G27760, AT5G27830, AT5G28020, AT5G28030, AT5G28500, AT5G28610, AT5G28640, AT5G28770, AT5G28919, AT5G28920, AT5G35170, AT5G35580, AT5G35790, AT5G36002, AT5G38200, AT5G38212, AT5G38250, AT5G38290, AT5G38340, AT5G38350, AT5G38410, AT5G38510, AT5G38520, AT5G38700, AT5G38895, AT5G38900, AT5G39040, AT5G39080, AT5G39090, AT5G39210, AT5G39530, AT5G39610, AT5G39670, AT5G39680, AT5G39785, AT5G39860, AT5G40210, AT5G40300, AT5G40380, AT5G40730, AT5G40800, AT5G40890, AT5G41050, AT5G41070, AT5G41080, AT5G41180, AT5G41280, AT5G41550, AT5G41590, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41750, AT5G41800, AT5G41880, AT5G41900, AT5G41940, AT5G42010, AT5G42050, AT5G42070, AT5G42200, AT5G42380, AT5G42440, AT5G42450, AT5G42800, AT5G42830, AT5G43160, AT5G43170, AT5G43270, AT5G43380, AT5G43750, AT5G43870, AT5G43910, AT5G44020, AT5G44130, AT5G44190, AT5G44260, AT5G44410, AT5G44460, AT5G44480, AT5G44569, AT5G44570, AT5G44600, AT5G44820, AT5G44990, AT5G45000, AT5G45070, AT5G45080, AT5G45090, AT5G45100, AT5G45110, AT5G45440, AT5G45475, AT5G45480, AT5G45500, AT5G45510, AT5G45630, AT5G45650, AT5G45680, AT5G45820, AT5G45830, AT5G45840, AT5G46220, AT5G46230, AT5G46410, AT5G46500, AT5G46520, AT5G46580, AT5G46600, AT5G46960, AT5G47070, AT5G47130, AT5G47140, AT5G47240, AT5G47330, AT5G47370, AT5G47440, AT5G47730, AT5G47900, AT5G47960, AT5G48290, AT5G48400, AT5G48410, AT5G48545, AT5G48820, AT5G48850, AT5G48910, AT5G49390, AT5G49448, AT5G49450, AT5G49680, AT5G49730, AT5G49740, AT5G50450, AT5G50950, AT5G51060, AT5G51390, AT5G51550, AT5G51630, AT5G51720, AT5G51740, AT5G51830, AT5G51910, AT5G51950, AT5G51970, AT5G52020, AT5G52100, AT5G52120, AT5G52570, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52770, AT5G52800, AT5G52810, AT5G52820, AT5G52970, AT5G53110, AT5G53360, AT5G53588, AT5G53830, AT5G54040, AT5G54060, AT5G54140, AT5G54145, AT5G54148, AT5G54170, AT5G54270, AT5G54490, AT5G54585, AT5G54700, AT5G54710, AT5G54720, AT5G54840, AT5G54980, AT5G55170, AT5G55180, AT5G55420, AT5G55450, AT5G55460, AT5G55560, AT5G55740, AT5G56050, AT5G56340, AT5G56544, AT5G56550, AT5G56580, AT5G56850, AT5G56960, AT5G56970, AT5G57050, AT5G57100, AT5G57150, AT5G57170, AT5G57340, AT5G57510, AT5G57550, AT5G57560, AT5G57630, AT5G57660, AT5G57800, AT5G57880, AT5G57910, AT5G57970, AT5G58260, AT5G58310, AT5G58570, AT5G58620, AT5G58770, AT5G58840, AT5G58900, AT5G58940, AT5G59130, AT5G59220, AT5G59310, AT5G59490, AT5G59510, AT5G59530, AT5G59570, AT5G59730, AT5G59750, AT5G59760, AT5G59820, AT5G60280, AT5G60285, AT5G60400, AT5G60680, AT5G60790, AT5G60800, AT5G60900, AT5G60930, AT5G61010, AT5G61070, AT5G61250, AT5G61350, AT5G61390, AT5G61430, AT5G61590, AT5G61890, AT5G61900, AT5G61910, AT5G62020, AT5G62140, AT5G62150, AT5G62170, AT5G62180, AT5G62280, AT5G62350, AT5G62360, AT5G62430, AT5G62480, AT5G62720, AT5G62730, AT5G62770, AT5G62820, AT5G62840, AT5G63130, AT5G63160, AT5G63225, AT5G63240, AT5G63380, AT5G63500, AT5G63700, AT5G63780, AT5G63800, AT5G63810, AT5G63820, AT5G64000, AT5G64040, AT5G64170, AT5G64250, AT5G64380, AT5G64530, AT5G64700, AT5G64780, AT5G64800, AT5G64810, AT5G64850, AT5G64870, AT5G65090, AT5G65207, AT5G65925, AT5G66350, AT5G66520, AT5G66580, AT5G66600, AT5G66620, AT5G66630, AT5G66650, AT5G66880, AT5G66890, AT5G66910, AT5G67080, AT5G67100, AT5G67150, AT5G67300, AT5G67340, AT5G67370, AT5G67470, AT5G67480, AT5G67600, ATCG00640, ATMG00040, ATMG00280
## 31 NA
## 32 NA
## 33 AT1G01010, AT1G01120, AT1G01340, AT1G01370, AT1G01390, AT1G01430, AT1G01480, AT1G01560, AT1G01660, AT1G01680, AT1G01690, AT1G02205, AT1G02220, AT1G02230, AT1G02270, AT1G02310, AT1G02390, AT1G02450, AT1G02500, AT1G02520, AT1G02610, AT1G02620, AT1G02740, AT1G02820, AT1G02850, AT1G02920, AT1G02930, AT1G03020, AT1G03050, AT1G03130, AT1G03310, AT1G03495, AT1G03600, AT1G03630, AT1G03660, AT1G03940, AT1G04310, AT1G04600, AT1G04680, AT1G04770, AT1G04870, AT1G05020, AT1G05100, AT1G05170, AT1G05540, AT1G05570, AT1G05880, AT1G06040, AT1G06180, AT1G06360, AT1G06460, AT1G06620, AT1G06680, AT1G07000, AT1G07430, AT1G07440, AT1G07500, AT1G07620, AT1G08050, AT1G08380, AT1G08450, AT1G08550, AT1G08860, AT1G09340, AT1G09350, AT1G09930, AT1G10040, AT1G10150, AT1G10280, AT1G10760, AT1G10960, AT1G11130, AT1G11180, AT1G11260, AT1G11290, AT1G11330, AT1G11362, AT1G11380, AT1G11905, AT1G12090, AT1G12160, AT1G12200, AT1G12210, AT1G12290, AT1G12500, AT1G12710, AT1G12730, AT1G12900, AT1G12940, AT1G13245, AT1G13330, AT1G13340, AT1G13520, AT1G13700, AT1G13830, AT1G13930, AT1G14030, AT1G14150, AT1G14160, AT1G14345, AT1G14540, AT1G14700, AT1G14720, AT1G14870, AT1G14880, AT1G15040, AT1G15080, AT1G15150, AT1G15160, AT1G15290, AT1G15520, AT1G15550, AT1G15690, AT1G15790, AT1G15820, AT1G15980, AT1G15990, AT1G16080, AT1G16090, AT1G16150, AT1G16300, AT1G16400, AT1G16410, AT1G16420, AT1G16670, AT1G16720, AT1G17170, AT1G17240, AT1G17340, AT1G17380, AT1G17500, AT1G17600, AT1G17615, AT1G17745, AT1G17750, AT1G17970, AT1G18000, AT1G18010, AT1G18330, AT1G18570, AT1G18890, AT1G18910, AT1G19020, AT1G19150, AT1G19250, AT1G19450, AT1G19510, AT1G19540, AT1G19715, AT1G20010, AT1G20020, AT1G20030, AT1G20440, AT1G21240, AT1G21250, AT1G21310, AT1G21390, AT1G21500, AT1G21520, AT1G21525, AT1G21740, AT1G21910, AT1G22190, AT1G22220, AT1G22360, AT1G22370, AT1G22380, AT1G22400, AT1G22403, AT1G22480, AT1G22490, AT1G22500, AT1G22530, AT1G22550, AT1G22570, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23052, AT1G23200, AT1G23205, AT1G23390, AT1G23400, AT1G23480, AT1G23740, AT1G23840, AT1G24095, AT1G24140, AT1G24150, AT1G25220, AT1G25450, AT1G26130, AT1G26150, AT1G26230, AT1G26380, AT1G26390, AT1G26410, AT1G26420, AT1G26800, AT1G27480, AT1G27770, AT1G27950, AT1G28010, AT1G28330, AT1G28370, AT1G28480, AT1G29090, AT1G29195, AT1G29280, AT1G29290, AT1G29430, AT1G29440, AT1G29460, AT1G29500, AT1G29510, AT1G29640, AT1G29670, AT1G29715, AT1G30040, AT1G30100, AT1G30270, AT1G30420, AT1G30520, AT1G30620, AT1G30900, AT1G31010, AT1G31173, AT1G31290, AT1G31330, AT1G31880, AT1G32060, AT1G32080, AT1G32330, AT1G32350, AT1G32870, AT1G32940, AT1G32950, AT1G32960, AT1G33030, AT1G33110, AT1G33170, AT1G33240, AT1G33420, AT1G33430, AT1G33560, AT1G33720, AT1G33730, AT1G33760, AT1G33800, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G34750, AT1G35140, AT1G35210, AT1G35230, AT1G35420, AT1G35710, AT1G35910, AT1G36370, AT1G36622, AT1G37130, AT1G42550, AT1G42980, AT1G43670, AT1G43910, AT1G44000, AT1G44130, AT1G44446, AT1G45145, AT1G47210, AT1G47370, AT1G47440, AT1G47510, AT1G47580, AT1G47890, AT1G48030, AT1G48315, AT1G48320, AT1G48370, AT1G48605, AT1G48870, AT1G49010, AT1G49050, AT1G49200, AT1G49380, AT1G49490, AT1G49650, AT1G49975, AT1G50290, AT1G50400, AT1G50732, AT1G51400, AT1G51640, AT1G51645, AT1G51660, AT1G51670, AT1G51760, AT1G51805, AT1G51850, AT1G51860, AT1G51890, AT1G51940, AT1G52230, AT1G52315, AT1G52540, AT1G52770, AT1G52890, AT1G53100, AT1G53160, AT1G53620, AT1G54000, AT1G54780, AT1G54790, AT1G54820, AT1G54960, AT1G55370, AT1G55480, AT1G55610, AT1G55790, AT1G56080, AT1G56165, AT1G56470, AT1G56540, AT1G56550, AT1G56600, AT1G56670, AT1G56720, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G58300, AT1G59590, AT1G60160, AT1G60550, AT1G60590, AT1G60690, AT1G60730, AT1G60800, AT1G61140, AT1G61250, AT1G61300, AT1G61340, AT1G61370, AT1G61420, AT1G61520, AT1G61550, AT1G61640, AT1G61795, AT1G61800, AT1G61810, AT1G62170, AT1G62180, AT1G62320, AT1G62422, AT1G62510, AT1G62560, AT1G62580, AT1G62630, AT1G63040, AT1G63090, AT1G63245, AT1G63570, AT1G63720, AT1G63750, AT1G63820, AT1G63840, AT1G63930, AT1G64400, AT1G64405, AT1G64610, AT1G64625, AT1G64770, AT1G64900, AT1G65390, AT1G65483, AT1G65590, AT1G65690, AT1G65870, AT1G66090, AT1G66130, AT1G66230, AT1G66250, AT1G66390, AT1G66460, AT1G66550, AT1G66600, AT1G66700, AT1G66780, AT1G66840, AT1G66880, AT1G66930, AT1G66960, AT1G67000, AT1G67070, AT1G67265, AT1G67360, AT1G67520, AT1G67630, AT1G67635, AT1G67650, AT1G67740, AT1G67800, AT1G67810, AT1G67820, AT1G67850, AT1G67980, AT1G68010, AT1G68050, AT1G68110, AT1G68190, AT1G68200, AT1G68390, AT1G68520, AT1G68540, AT1G68620, AT1G68670, AT1G68690, AT1G68710, AT1G68830, AT1G68890, AT1G69140, AT1G69260, AT1G69270, AT1G69520, AT1G69610, AT1G69790, AT1G69840, AT1G69890, AT1G69930, AT1G70090, AT1G70140, AT1G70170, AT1G70290, AT1G70580, AT1G70690, AT1G70820, AT1G71000, AT1G71030, AT1G71390, AT1G71690, AT1G72000, AT1G72030, AT1G72140, AT1G72150, AT1G72220, AT1G72270, AT1G72416, AT1G72430, AT1G72500, AT1G72540, 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AT2G34510, AT2G34600, AT2G34620, AT2G34650, AT2G34760, AT2G34940, AT2G35130, AT2G35260, AT2G35660, AT2G35710, AT2G35760, AT2G35960, AT2G35980, AT2G36050, AT2G36270, AT2G36580, AT2G36670, AT2G36690, AT2G36830, AT2G36990, AT2G37100, AT2G37220, AT2G37260, AT2G37440, AT2G37450, AT2G37530, AT2G37540, AT2G37560, AT2G37585, AT2G37710, AT2G37790, AT2G37890, AT2G37950, AT2G37980, AT2G38210, AT2G38230, AT2G38290, AT2G38340, AT2G38460, AT2G38490, AT2G38530, AT2G38540, AT2G38820, AT2G38860, AT2G39110, AT2G39220, AT2G39230, AT2G39320, AT2G39350, AT2G39435, AT2G39530, AT2G39650, AT2G39730, AT2G39880, AT2G39920, AT2G39980, AT2G40000, AT2G40080, AT2G40140, AT2G40150, AT2G40330, AT2G40540, AT2G40670, AT2G40740, AT2G40840, AT2G41010, AT2G41050, AT2G41100, AT2G41380, AT2G41410, AT2G41430, AT2G41480, AT2G41660, AT2G41880, AT2G42060, AT2G42320, AT2G42350, AT2G42380, AT2G42485, AT2G42890, AT2G42950, AT2G43000, AT2G43010, AT2G43050, AT2G43100, AT2G43120, AT2G43140, AT2G43320, AT2G43570, AT2G43580, AT2G43590, 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AT3G10660, AT3G10820, AT3G11000, AT3G11010, AT3G11080, AT3G11110, AT3G11220, AT3G11340, AT3G11420, AT3G11600, AT3G11700, AT3G11820, AT3G11840, AT3G12110, AT3G12220, AT3G12230, AT3G12520, AT3G12685, AT3G12830, AT3G12910, AT3G13080, AT3G13090, AT3G13100, AT3G13380, AT3G13470, AT3G13610, AT3G13750, AT3G13782, AT3G13900, AT3G13950, AT3G14050, AT3G14200, AT3G14415, AT3G14440, AT3G14460, AT3G14470, AT3G14475, AT3G14590, AT3G14610, AT3G14680, AT3G14700, AT3G14840, AT3G14850, AT3G14990, AT3G15354, AT3G15450, AT3G15500, AT3G15570, AT3G15720, AT3G15850, AT3G15990, AT3G16030, AT3G16250, AT3G16350, AT3G16510, AT3G16620, AT3G16800, AT3G16980, AT3G17170, AT3G17240, AT3G17350, AT3G17420, AT3G17470, AT3G17520, AT3G17609, AT3G17640, AT3G17690, AT3G17800, AT3G17930, AT3G18080, AT3G18710, AT3G18750, AT3G18773, AT3G19000, AT3G19002, AT3G19480, AT3G19580, AT3G19680, AT3G19700, AT3G19910, AT3G19930, AT3G20250, AT3G20350, AT3G20470, AT3G20480, AT3G20640, AT3G20820, AT3G21140, AT3G21150, AT3G21220, AT3G21240, 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AT3G57460, AT3G57630, AT3G57765, AT3G57880, AT3G58200, AT3G58620, AT3G58990, AT3G59010, AT3G59060, AT3G59120, AT3G59150, AT3G59700, AT3G59710, AT3G59750, AT3G59940, AT3G60110, AT3G60164, AT3G60190, AT3G60290, AT3G60390, AT3G60420, AT3G60470, AT3G60800, AT3G60970, AT3G61060, AT3G61190, AT3G61198, AT3G61220, AT3G61390, AT3G61450, AT3G61900, AT3G61960, AT3G62260, AT3G62410, AT3G62550, AT3G62750, AT3G62760, AT3G62860, AT3G62950, AT3G63010, AT3G63060, AT3G63380, AT4G00165, AT4G00360, AT4G00370, AT4G00850, AT4G01010, AT4G01130, AT4G01200, AT4G01330, AT4G01360, AT4G01430, AT4G01540, AT4G01870, AT4G01895, AT4G01920, AT4G01950, AT4G02220, AT4G02280, AT4G02380, AT4G02420, AT4G02520, AT4G02550, AT4G02630, AT4G02660, AT4G02770, AT4G03400, AT4G03450, AT4G03460, AT4G03510, AT4G04220, AT4G04221, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04540, AT4G04610, AT4G04620, AT4G04810, AT4G04830, AT4G04840, AT4G04920, AT4G05020, AT4G05030, AT4G05390, AT4G06534, AT4G07400, AT4G08300, AT4G08770, AT4G09350, AT4G09570, AT4G09650, AT4G09670, AT4G09760, AT4G09770, AT4G09820, AT4G10120, AT4G10340, AT4G10380, AT4G10390, AT4G10500, AT4G10955, AT4G10960, AT4G11170, AT4G11240, AT4G11340, AT4G11350, AT4G11360, AT4G11521, AT4G11655, AT4G11840, AT4G11850, AT4G11890, AT4G12120, AT4G12310, AT4G12320, AT4G12330, AT4G12390, AT4G12420, AT4G12490, AT4G12500, AT4G12720, AT4G12730, AT4G12830, AT4G12900, AT4G12917, AT4G12980, AT4G13000, AT4G13180, AT4G13340, AT4G13810, AT4G13820, AT4G13830, AT4G13900, AT4G13918, AT4G13920, AT4G14090, AT4G14220, AT4G14270, AT4G14365, AT4G14368, AT4G14370, AT4G14540, AT4G14630, AT4G14690, AT4G14740, AT4G15070, AT4G15200, AT4G15210, AT4G15270, AT4G15280, AT4G15417, AT4G15450, AT4G15630, AT4G15670, AT4G15910, AT4G16260, AT4G16350, AT4G16563, AT4G16600, AT4G16740, AT4G16820, AT4G16960, AT4G17090, AT4G17250, AT4G17340, AT4G17360, AT4G17460, AT4G17660, AT4G17695, AT4G17810, AT4G18210, AT4G18240, AT4G18250, AT4G18360, AT4G18430, AT4G18630, AT4G18980, AT4G19170, AT4G19420, AT4G19530, AT4G19925, AT4G19970, AT4G20110, AT4G20140, AT4G20260, AT4G20460, AT4G20820, AT4G20840, AT4G20860, AT4G21280, AT4G21400, AT4G21445, AT4G21610, AT4G21840, AT4G21850, AT4G21870, AT4G21903, AT4G21930, AT4G21990, AT4G22070, AT4G22520, AT4G22530, AT4G22590, AT4G22592, AT4G22880, AT4G23030, AT4G23140, AT4G23150, AT4G23160, AT4G23200, AT4G23210, AT4G23215, AT4G23220, AT4G23250, AT4G23280, AT4G23300, AT4G23310, AT4G23320, AT4G23450, AT4G23470, AT4G23700, AT4G23890, AT4G24000, AT4G24160, AT4G24230, AT4G24350, AT4G24660, AT4G24670, AT4G24810, AT4G25050, AT4G25070, AT4G25080, AT4G25390, AT4G25470, AT4G25480, AT4G25810, AT4G25880, AT4G25900, AT4G26060, AT4G26120, AT4G26150, AT4G26270, AT4G26370, AT4G26400, AT4G26470, AT4G26520, AT4G26530, AT4G26910, AT4G26970, AT4G26990, AT4G27030, AT4G27220, AT4G27280, AT4G27290, AT4G27310, AT4G27440, AT4G27450, AT4G27480, AT4G27700, AT4G27720, AT4G27730, AT4G27820, AT4G27830, AT4G28390, AT4G28490, AT4G28703, AT4G28740, AT4G29190, AT4G29440, AT4G29740, AT4G29810, AT4G29905, AT4G30250, AT4G30280, AT4G30430, AT4G30860, AT4G31230, AT4G31500, AT4G31850, AT4G31860, AT4G32340, AT4G32350, AT4G32480, AT4G32770, AT4G32800, AT4G32870, AT4G32980, AT4G33000, AT4G33010, AT4G33040, AT4G33050, AT4G33220, AT4G33300, AT4G33467, AT4G33660, AT4G33810, AT4G33925, AT4G33930, AT4G33980, AT4G34135, AT4G34150, AT4G34200, AT4G34220, AT4G34250, AT4G34390, AT4G34588, AT4G34590, AT4G34710, AT4G34730, AT4G34880, AT4G34900, AT4G34950, AT4G35070, AT4G35090, AT4G35110, AT4G35180, AT4G35380, AT4G35500, AT4G35590, AT4G35600, AT4G35630, AT4G35720, AT4G36040, AT4G36410, AT4G36430, AT4G36530, AT4G36640, AT4G36670, AT4G36710, AT4G36950, AT4G36988, AT4G36990, AT4G37010, AT4G37240, AT4G37260, AT4G37370, AT4G37450, AT4G37610, AT4G37640, AT4G37800, AT4G37900, AT4G37925, AT4G38340, AT4G38400, AT4G38430, AT4G38470, AT4G38540, AT4G38545, AT4G38560, AT4G38770, AT4G38840, AT4G38940, AT4G39010, AT4G39020, AT4G39030, AT4G39330, AT4G39404, AT4G39610, AT4G39670, AT4G39710, AT4G39770, AT4G39890, AT4G39950, AT5G01040, AT5G01050, AT5G01100, AT5G01250, AT5G01340, AT5G01410, AT5G01490, AT5G01520, AT5G01550, AT5G01640, AT5G01850, AT5G01900, AT5G01980, AT5G02010, AT5G02100, AT5G02120, AT5G02170, AT5G02180, AT5G02420, AT5G02490, AT5G02780, AT5G02810, AT5G02830, AT5G03210, AT5G03285, AT5G04190, AT5G04720, AT5G04930, AT5G04950, AT5G05300, AT5G05330, AT5G05440, AT5G05460, AT5G05580, AT5G05740, AT5G05890, AT5G06320, AT5G06330, AT5G06610, AT5G06690, AT5G06760, AT5G06980, AT5G07580, AT5G07650, AT5G07760, AT5G07780, AT5G07990, AT5G08020, AT5G08150, AT5G08410, AT5G08720, AT5G09290, AT5G09420, AT5G09440, AT5G09660, AT5G09800, AT5G09980, AT5G10380, AT5G10400, AT5G10440, AT5G10470, AT5G10520, AT5G11030, AT5G11160, AT5G11210, AT5G11410, AT5G11610, AT5G11650, AT5G11870, AT5G11920, AT5G12050, AT5G12080, AT5G12110, AT5G12420, AT5G12950, AT5G13190, AT5G13200, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14200, AT5G14360, AT5G14420, AT5G14740, AT5G14760, AT5G14930, AT5G15130, AT5G15350, AT5G16170, AT5G16360, AT5G16370, AT5G16400, AT5G16480, AT5G16810, AT5G17060, AT5G17220, AT5G17330, AT5G17350, AT5G17380, AT5G17670, AT5G17760, AT5G17780, AT5G18030, AT5G18080, AT5G18270, AT5G18470, AT5G18570, AT5G18670, AT5G19100, AT5G19120, AT5G19140, AT5G19730, AT5G20225, AT5G20250, AT5G20400, AT5G20670, AT5G20740, AT5G20960, AT5G21100, AT5G21222, AT5G21430, AT5G21900, AT5G21930, AT5G21940, AT5G22060, AT5G22250, AT5G22380, AT5G22570, AT5G22630, AT5G22640, AT5G22920, AT5G22940, AT5G23010, AT5G23060, AT5G23210, AT5G23850, AT5G23870, AT5G23980, AT5G24000, AT5G24030, AT5G24090, AT5G24120, AT5G24150, AT5G24155, AT5G24160, AT5G24200, AT5G24205, AT5G24206, AT5G24210, AT5G24470, AT5G24490, AT5G24540, AT5G24660, AT5G24810, AT5G24850, AT5G24910, AT5G25120, AT5G25130, AT5G25140, AT5G25190, AT5G25250, AT5G25451, AT5G25610, AT5G25820, AT5G25910, AT5G25930, AT5G26170, AT5G26220, AT5G26230, AT5G26690, AT5G26700, AT5G26820, AT5G26920, AT5G27060, AT5G27290, AT5G27350, AT5G27390, AT5G27610, AT5G27760, AT5G27830, AT5G28020, AT5G28030, AT5G28640, AT5G28770, AT5G35170, AT5G35580, AT5G35790, AT5G36002, AT5G38200, AT5G38212, AT5G38250, AT5G38290, AT5G38340, AT5G38350, AT5G38410, AT5G38510, AT5G38520, AT5G38895, AT5G38900, AT5G39040, AT5G39080, AT5G39090, AT5G39210, AT5G39610, AT5G39680, AT5G39785, AT5G39860, AT5G40210, AT5G40300, AT5G40380, AT5G40890, AT5G41080, AT5G41180, AT5G41550, AT5G41590, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41750, AT5G41800, AT5G41880, AT5G41900, AT5G41940, AT5G42010, AT5G42050, AT5G42200, AT5G42380, AT5G42440, AT5G42450, AT5G42800, AT5G42830, AT5G43160, AT5G43170, AT5G43270, AT5G43380, AT5G43750, AT5G43870, AT5G43910, AT5G44020, AT5G44130, AT5G44190, AT5G44260, AT5G44410, AT5G44460, AT5G44480, AT5G44569, AT5G44570, AT5G44600, AT5G45000, AT5G45070, AT5G45080, AT5G45090, AT5G45100, AT5G45110, AT5G45440, AT5G45475, AT5G45480, AT5G45510, AT5G45630, AT5G45650, AT5G45680, AT5G45820, AT5G45830, AT5G45840, AT5G46220, AT5G46410, AT5G46520, AT5G46580, AT5G46600, AT5G46960, AT5G47070, AT5G47130, AT5G47140, AT5G47240, AT5G47330, AT5G47370, AT5G47440, AT5G47730, AT5G47960, AT5G48290, AT5G48400, AT5G48410, AT5G48545, AT5G48820, AT5G48850, AT5G48910, AT5G49390, AT5G49448, AT5G49450, AT5G49680, AT5G49730, AT5G49740, AT5G50450, AT5G50950, AT5G51060, AT5G51550, AT5G51630, AT5G51720, AT5G51740, AT5G51830, AT5G51910, AT5G51950, AT5G51970, AT5G52020, AT5G52100, AT5G52120, AT5G52310, AT5G52570, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52770, AT5G52800, AT5G52810, AT5G52820, AT5G53110, AT5G53360, AT5G53588, AT5G53590, AT5G54040, AT5G54060, AT5G54140, AT5G54148, AT5G54170, AT5G54270, AT5G54490, AT5G54720, AT5G54840, AT5G54980, AT5G55170, AT5G55180, AT5G55420, AT5G55450, AT5G55460, AT5G55560, AT5G55740, AT5G56100, AT5G56340, AT5G56544, AT5G56550, AT5G56580, AT5G56850, AT5G56960, AT5G56970, AT5G57050, AT5G57100, AT5G57150, AT5G57170, AT5G57510, AT5G57550, AT5G57560, AT5G57630, AT5G57660, AT5G57800, AT5G57880, AT5G57910, AT5G57970, AT5G58260, AT5G58310, AT5G58620, AT5G58770, AT5G58840, AT5G58900, AT5G58940, AT5G59130, AT5G59220, AT5G59310, AT5G59490, AT5G59510, AT5G59530, AT5G59570, AT5G59730, AT5G59750, AT5G59820, AT5G60280, AT5G60285, AT5G60680, AT5G60790, AT5G60800, AT5G60900, AT5G60930, AT5G61010, AT5G61070, AT5G61250, AT5G61350, AT5G61390, AT5G61430, AT5G61590, AT5G61890, AT5G61900, AT5G61910, AT5G62020, AT5G62140, AT5G62150, AT5G62180, AT5G62350, AT5G62360, AT5G62430, AT5G62480, AT5G62730, AT5G62770, AT5G62820, AT5G62840, AT5G63130, AT5G63160, AT5G63380, AT5G63700, AT5G63780, AT5G63800, AT5G63810, AT5G63820, AT5G64000, AT5G64040, AT5G64170, AT5G64250, AT5G64380, AT5G64530, AT5G64700, AT5G64800, AT5G64810, AT5G65090, AT5G66350, AT5G66520, AT5G66580, AT5G66600, AT5G66620, AT5G66630, AT5G66650, AT5G66880, AT5G66890, AT5G66910, AT5G67080, AT5G67100, AT5G67150, AT5G67300, AT5G67340, AT5G67370, AT5G67470, AT5G67480, AT5G67600, ATCG00640, ATMG00040, ATMG00280
## 34 NA
## 35 NA
## 36 AT1G01010, AT1G01120, AT1G01340, AT1G01370, AT1G01390, AT1G01430, AT1G01480, AT1G01560, AT1G01660, AT1G01680, AT1G01690, AT1G02205, AT1G02220, AT1G02230, AT1G02270, AT1G02310, AT1G02390, AT1G02450, AT1G02470, AT1G02500, AT1G02520, AT1G02610, AT1G02620, AT1G02740, AT1G02820, AT1G02850, AT1G02920, AT1G02930, AT1G03020, AT1G03050, AT1G03130, AT1G03310, AT1G03495, AT1G03600, AT1G03610, AT1G03630, AT1G03660, AT1G03940, AT1G04310, AT1G04490, AT1G04600, AT1G04680, AT1G04770, AT1G04870, AT1G05020, AT1G05100, AT1G05170, AT1G05340, AT1G05540, AT1G05570, AT1G05880, AT1G06040, AT1G06148, AT1G06180, AT1G06360, AT1G06460, AT1G06620, AT1G06680, AT1G07000, AT1G07050, AT1G07280, AT1G07430, AT1G07440, AT1G07500, AT1G07620, AT1G07900, AT1G08050, AT1G08380, AT1G08450, AT1G08550, AT1G08860, AT1G09310, AT1G09340, AT1G09350, AT1G09930, AT1G09932, AT1G10020, AT1G10040, AT1G10150, AT1G10280, AT1G10340, AT1G10417, AT1G10657, AT1G10760, AT1G10960, AT1G10990, AT1G11130, AT1G11180, AT1G11260, AT1G11290, AT1G11330, AT1G11362, AT1G11380, AT1G11905, AT1G11925, AT1G12090, AT1G12200, AT1G12210, AT1G12290, AT1G12320, AT1G12450, AT1G12500, AT1G12710, AT1G12730, AT1G12900, AT1G12940, AT1G13245, AT1G13330, AT1G13340, AT1G13470, AT1G13540, AT1G13550, AT1G13650, AT1G13700, AT1G13830, AT1G13930, AT1G14030, AT1G14150, AT1G14160, AT1G14345, AT1G14480, AT1G14540, AT1G14700, AT1G14720, AT1G14870, AT1G14880, AT1G15080, AT1G15150, AT1G15160, AT1G15290, AT1G15415, AT1G15520, AT1G15550, AT1G15690, AT1G15790, AT1G15820, AT1G15830, AT1G15980, AT1G15990, AT1G16080, AT1G16090, AT1G16150, AT1G16300, AT1G16400, AT1G16410, AT1G16420, AT1G16670, AT1G16720, AT1G16730, AT1G17100, AT1G17170, AT1G17240, AT1G17340, AT1G17380, AT1G17500, AT1G17600, AT1G17615, AT1G17744, AT1G17745, AT1G17750, AT1G17830, AT1G17850, AT1G17970, AT1G18000, AT1G18010, AT1G18265, AT1G18330, AT1G18485, AT1G18570, AT1G18890, AT1G18910, AT1G19150, AT1G19250, AT1G19450, AT1G19510, AT1G19540, AT1G19715, AT1G19720, AT1G20010, AT1G20020, AT1G20030, AT1G20310, AT1G20440, AT1G20460, AT1G21240, AT1G21250, AT1G21310, AT1G21370, AT1G21390, AT1G21500, AT1G21520, AT1G21525, AT1G21740, AT1G21910, AT1G22180, AT1G22190, AT1G22220, AT1G22330, AT1G22360, AT1G22370, AT1G22380, AT1G22400, AT1G22403, AT1G22480, AT1G22490, AT1G22500, AT1G22530, AT1G22550, AT1G22570, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23050, AT1G23052, AT1G23200, AT1G23205, AT1G23390, AT1G23400, AT1G23480, AT1G23710, AT1G23740, AT1G23840, AT1G23850, AT1G24095, AT1G24140, AT1G24145, AT1G24150, AT1G25220, AT1G25370, AT1G25400, AT1G25450, AT1G26130, AT1G26150, AT1G26230, AT1G26380, AT1G26390, AT1G26410, AT1G26420, AT1G26761, AT1G26800, AT1G27480, AT1G27770, AT1G27950, AT1G28010, AT1G28330, AT1G28370, AT1G28480, AT1G29090, AT1G29195, AT1G29280, AT1G29290, AT1G29430, AT1G29440, AT1G29460, AT1G29500, AT1G29510, AT1G29530, AT1G29600, AT1G29640, AT1G29670, AT1G29680, AT1G29715, AT1G30040, AT1G30100, AT1G30190, AT1G30270, AT1G30420, AT1G30520, AT1G30620, AT1G30814, AT1G30850, AT1G30900, AT1G31010, AT1G31173, AT1G31290, AT1G31330, AT1G31880, AT1G31920, AT1G32060, AT1G32080, AT1G32330, AT1G32350, AT1G32870, AT1G32940, AT1G32950, AT1G32960, AT1G33030, AT1G33110, AT1G33170, AT1G33240, AT1G33420, AT1G33430, AT1G33560, AT1G33720, AT1G33730, AT1G33760, AT1G33800, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G34750, AT1G35140, AT1G35210, AT1G35230, AT1G35420, AT1G35710, AT1G35910, AT1G36370, AT1G36622, AT1G36675, AT1G37130, AT1G42550, AT1G42980, AT1G43670, AT1G43910, AT1G44000, AT1G44130, AT1G44446, AT1G45010, AT1G45145, AT1G47210, AT1G47370, AT1G47440, AT1G47510, AT1G47580, AT1G47890, AT1G48030, AT1G48315, AT1G48320, AT1G48370, AT1G48605, AT1G48870, AT1G49010, AT1G49050, AT1G49200, AT1G49380, AT1G49490, AT1G49650, AT1G49975, AT1G50040, AT1G50290, AT1G50400, AT1G50590, AT1G50732, AT1G51400, AT1G51402, AT1G51640, AT1G51645, AT1G51660, AT1G51670, AT1G51760, AT1G51805, AT1G51850, AT1G51860, AT1G51890, AT1G51920, AT1G51940, AT1G52230, AT1G52315, AT1G52342, AT1G52540, AT1G52565, AT1G52770, AT1G52855, AT1G52890, AT1G53100, AT1G53160, AT1G53620, AT1G54000, AT1G54780, AT1G54790, AT1G54820, AT1G54960, AT1G55330, AT1G55370, AT1G55480, AT1G55610, AT1G55790, AT1G56080, AT1G56165, AT1G56470, AT1G56540, AT1G56550, AT1G56600, AT1G56660, AT1G56670, AT1G56720, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G58300, AT1G59590, AT1G59865, AT1G60160, AT1G60550, AT1G60590, AT1G60690, AT1G60730, AT1G60800, AT1G61140, AT1G61160, AT1G61215, AT1G61250, AT1G61260, AT1G61300, AT1G61340, AT1G61370, AT1G61415, AT1G61420, AT1G61520, AT1G61550, AT1G61640, AT1G61795, AT1G61800, AT1G61810, AT1G62170, AT1G62180, AT1G62320, AT1G62422, AT1G62510, AT1G62560, AT1G62580, AT1G62630, AT1G63040, AT1G63090, AT1G63245, AT1G63570, AT1G63720, AT1G63750, AT1G63820, AT1G63840, AT1G63930, AT1G64065, AT1G64355, AT1G64400, AT1G64405, AT1G64610, AT1G64625, AT1G64680, AT1G64770, AT1G64900, AT1G65230, AT1G65390, AT1G65481, AT1G65483, AT1G65500, AT1G65590, AT1G65690, AT1G65870, AT1G66090, AT1G66130, 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AT3G55630, AT3G55646, AT3G55730, AT3G55760, AT3G55800, AT3G55880, AT3G55950, AT3G56000, AT3G56160, AT3G56170, AT3G56275, AT3G56290, AT3G56360, AT3G56400, AT3G56500, AT3G56710, AT3G56870, AT3G56891, AT3G57020, AT3G57100, AT3G57190, AT3G57260, AT3G57330, AT3G57380, AT3G57630, AT3G57765, AT3G57880, AT3G57950, AT3G58200, AT3G58620, AT3G58990, AT3G59010, AT3G59060, AT3G59120, AT3G59150, AT3G59700, AT3G59710, AT3G59750, AT3G59940, AT3G60110, AT3G60164, AT3G60190, AT3G60290, AT3G60390, AT3G60420, AT3G60450, AT3G60470, AT3G60800, AT3G60966, AT3G60970, AT3G61060, AT3G61190, AT3G61198, AT3G61220, AT3G61390, AT3G61450, AT3G61870, AT3G61900, AT3G61960, AT3G62260, AT3G62410, AT3G62550, AT3G62630, AT3G62750, AT3G62760, AT3G62860, AT3G62950, AT3G63010, AT3G63060, AT3G63160, AT3G63380, AT4G00165, AT4G00360, AT4G00370, AT4G00700, AT4G00820, AT4G00850, AT4G01010, AT4G01130, AT4G01200, AT4G01330, AT4G01360, AT4G01430, AT4G01535, AT4G01540, AT4G01670, AT4G01870, AT4G01895, AT4G01920, AT4G01950, AT4G01985, AT4G02220, AT4G02280, AT4G02360, AT4G02380, AT4G02420, AT4G02520, AT4G02550, AT4G02630, AT4G02660, AT4G02760, AT4G02770, AT4G03400, AT4G03450, AT4G03460, AT4G03510, AT4G04220, AT4G04221, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04540, AT4G04610, AT4G04620, AT4G04745, AT4G04810, AT4G04830, AT4G04840, AT4G04920, AT4G05020, AT4G05030, AT4G05070, AT4G05390, AT4G06534, AT4G06536, AT4G07400, AT4G08300, AT4G08770, AT4G09300, AT4G09350, AT4G09570, AT4G09650, AT4G09670, AT4G09760, AT4G09770, AT4G09820, AT4G10120, AT4G10290, AT4G10340, AT4G10380, AT4G10390, AT4G10500, AT4G10955, AT4G10960, AT4G11170, AT4G11340, AT4G11350, AT4G11360, AT4G11521, AT4G11655, AT4G11840, AT4G11850, AT4G11890, AT4G12120, AT4G12310, AT4G12320, AT4G12330, AT4G12390, AT4G12420, AT4G12490, AT4G12500, AT4G12720, AT4G12730, AT4G12735, AT4G12830, AT4G12900, AT4G12917, AT4G12980, AT4G13000, AT4G13180, AT4G13320, AT4G13340, AT4G13810, AT4G13820, AT4G13830, AT4G13900, AT4G13918, AT4G13920, AT4G14090, AT4G14220, AT4G14270, AT4G14365, AT4G14368, AT4G14370, AT4G14540, AT4G14630, AT4G14690, AT4G14740, AT4G15070, AT4G15200, AT4G15210, AT4G15270, AT4G15280, AT4G15417, AT4G15450, AT4G15630, AT4G15670, AT4G15910, AT4G16260, AT4G16350, AT4G16563, AT4G16600, AT4G16740, AT4G16820, AT4G16960, AT4G16980, AT4G17090, AT4G17250, AT4G17340, AT4G17360, AT4G17460, AT4G17660, AT4G17670, AT4G17695, AT4G17810, AT4G18210, AT4G18240, AT4G18250, AT4G18360, AT4G18430, AT4G18630, AT4G18980, AT4G19170, AT4G19370, AT4G19420, AT4G19530, AT4G19925, AT4G19970, AT4G20000, AT4G20110, AT4G20140, AT4G20260, AT4G20460, AT4G20820, AT4G20840, AT4G20860, AT4G21280, AT4G21400, AT4G21445, AT4G21500, AT4G21610, AT4G21840, AT4G21850, AT4G21865, AT4G21870, AT4G21880, AT4G21903, AT4G21926, AT4G21930, AT4G21990, AT4G22070, AT4G22520, AT4G22530, AT4G22590, AT4G22592, AT4G22880, AT4G22980, AT4G23030, AT4G23140, AT4G23150, AT4G23160, AT4G23200, AT4G23210, AT4G23215, AT4G23220, AT4G23250, AT4G23280, AT4G23300, AT4G23310, AT4G23320, AT4G23450, AT4G23470, AT4G23610, AT4G23700, AT4G23890, AT4G24000, AT4G24026, AT4G24030, AT4G24090, AT4G24130, AT4G24160, AT4G24230, AT4G24350, AT4G24660, AT4G24670, AT4G24810, AT4G25050, AT4G25070, AT4G25080, AT4G25390, AT4G25470, AT4G25480, AT4G25780, AT4G25810, AT4G25880, AT4G25900, AT4G26060, AT4G26120, AT4G26150, AT4G26270, AT4G26370, AT4G26400, AT4G26470, AT4G26520, AT4G26530, AT4G26910, AT4G26970, AT4G26990, AT4G27030, AT4G27220, AT4G27280, AT4G27290, AT4G27310, AT4G27440, AT4G27450, AT4G27480, AT4G27700, AT4G27720, AT4G27730, AT4G27745, AT4G27820, AT4G27830, AT4G28390, AT4G28490, AT4G28703, AT4G28740, AT4G29190, AT4G29440, AT4G29740, AT4G29810, AT4G29850, AT4G30230, AT4G30250, AT4G30280, AT4G30430, AT4G30860, AT4G31230, AT4G31500, AT4G31850, AT4G31860, AT4G32340, AT4G32350, AT4G32480, AT4G32770, AT4G32800, AT4G32870, AT4G32980, AT4G33000, AT4G33010, AT4G33040, AT4G33050, AT4G33220, AT4G33300, AT4G33467, AT4G33625, AT4G33660, AT4G33810, AT4G33925, AT4G33930, AT4G33980, AT4G34090, AT4G34135, AT4G34150, AT4G34200, AT4G34220, AT4G34250, AT4G34380, AT4G34390, AT4G34588, AT4G34590, AT4G34710, AT4G34730, AT4G34880, AT4G34900, AT4G34950, AT4G35070, AT4G35090, AT4G35110, AT4G35165, AT4G35170, AT4G35180, AT4G35320, AT4G35380, AT4G35500, AT4G35590, AT4G35600, AT4G35630, AT4G35720, AT4G36040, AT4G36410, AT4G36430, AT4G36530, AT4G36640, AT4G36670, AT4G36700, AT4G36710, AT4G36950, AT4G36988, AT4G36990, AT4G37010, AT4G37022, AT4G37030, AT4G37260, AT4G37370, AT4G37450, AT4G37610, AT4G37640, AT4G37800, AT4G37900, AT4G37925, AT4G38340, AT4G38400, AT4G38430, AT4G38470, AT4G38540, AT4G38545, AT4G38560, AT4G38770, AT4G38840, AT4G38940, AT4G39010, AT4G39020, AT4G39030, AT4G39190, AT4G39330, AT4G39404, AT4G39610, AT4G39670, AT4G39710, AT4G39770, AT4G39890, AT4G39950, AT5G01015, AT5G01040, AT5G01050, AT5G01100, AT5G01250, AT5G01340, AT5G01410, AT5G01490, AT5G01520, AT5G01550, AT5G01610, AT5G01640, AT5G01850, AT5G01900, AT5G01980, AT5G02010, AT5G02100, AT5G02120, AT5G02160, AT5G02170, AT5G02180, AT5G02420, AT5G02490, AT5G02780, AT5G02810, AT5G02830, AT5G02950, AT5G03210, AT5G03285, AT5G04190, AT5G04720, AT5G04860, AT5G04930, AT5G04950, AT5G05300, AT5G05330, AT5G05440, AT5G05460, AT5G05580, AT5G05740, AT5G05890, AT5G06220, AT5G06320, AT5G06330, AT5G06610, AT5G06690, AT5G06760, AT5G06790, AT5G06980, AT5G07580, AT5G07650, AT5G07760, AT5G07780, AT5G07990, AT5G08020, AT5G08150, AT5G08240, AT5G08410, AT5G08720, AT5G09290, AT5G09420, AT5G09440, AT5G09660, AT5G09800, AT5G09820, AT5G09980, AT5G10150, AT5G10380, AT5G10400, AT5G10440, AT5G10470, AT5G10520, AT5G10690, AT5G11030, AT5G11070, AT5G11160, AT5G11210, AT5G11410, AT5G11580, AT5G11610, AT5G11650, AT5G11870, AT5G11920, AT5G12050, AT5G12080, AT5G12110, AT5G12420, AT5G12930, AT5G12950, AT5G13190, AT5G13200, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14200, AT5G14360, AT5G14420, AT5G14740, AT5G14760, AT5G14930, AT5G15130, AT5G15350, AT5G16170, AT5G16360, AT5G16370, AT5G16400, AT5G16480, AT5G16810, AT5G17060, AT5G17220, AT5G17330, AT5G17350, AT5G17380, AT5G17670, AT5G17760, AT5G17780, AT5G18030, AT5G18080, AT5G18270, AT5G18470, AT5G18570, AT5G18670, AT5G19100, AT5G19120, AT5G19140, AT5G19190, AT5G19240, AT5G19730, AT5G19940, AT5G20225, AT5G20250, AT5G20400, AT5G20670, AT5G20700, AT5G20740, AT5G20935, AT5G20960, AT5G21100, AT5G21222, AT5G21430, AT5G21900, AT5G21930, AT5G21940, AT5G22060, AT5G22250, AT5G22380, AT5G22540, AT5G22570, AT5G22630, AT5G22640, AT5G22920, AT5G22940, AT5G23010, AT5G23060, AT5G23160, AT5G23210, AT5G23360, AT5G23460, AT5G23850, AT5G23870, AT5G23920, AT5G23980, AT5G24000, AT5G24030, AT5G24090, AT5G24120, AT5G24150, AT5G24155, AT5G24160, AT5G24200, AT5G24205, AT5G24206, AT5G24210, AT5G24460, AT5G24470, AT5G24490, AT5G24540, AT5G24660, AT5G24810, AT5G24850, AT5G24910, AT5G25120, AT5G25130, AT5G25140, AT5G25190, AT5G25210, AT5G25250, AT5G25260, AT5G25451, AT5G25610, AT5G25630, AT5G25820, AT5G25910, AT5G25930, AT5G26170, AT5G26220, AT5G26230, AT5G26690, AT5G26700, AT5G26731, AT5G26820, AT5G26920, AT5G27060, AT5G27290, AT5G27350, AT5G27390, AT5G27610, AT5G27760, AT5G27830, AT5G28020, AT5G28030, AT5G28500, AT5G28640, AT5G28770, AT5G28919, AT5G28920, AT5G35170, AT5G35580, AT5G35790, AT5G36002, AT5G38200, AT5G38212, AT5G38250, AT5G38290, AT5G38340, AT5G38350, AT5G38410, AT5G38510, AT5G38520, AT5G38700, AT5G38895, AT5G38900, AT5G39040, AT5G39090, AT5G39210, AT5G39530, AT5G39610, AT5G39680, AT5G39785, AT5G39860, AT5G40210, AT5G40300, AT5G40380, AT5G40730, AT5G40890, AT5G41050, AT5G41070, AT5G41080, AT5G41180, AT5G41280, AT5G41550, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41750, AT5G41761, AT5G41800, AT5G41880, AT5G41900, AT5G41940, AT5G42010, AT5G42050, AT5G42070, AT5G42200, AT5G42380, AT5G42440, AT5G42450, AT5G42800, AT5G42830, AT5G43160, AT5G43170, AT5G43270, AT5G43380, AT5G43750, AT5G43870, AT5G43910, AT5G44005, AT5G44020, AT5G44130, AT5G44190, AT5G44260, AT5G44410, AT5G44460, AT5G44480, AT5G44569, AT5G44570, AT5G44585, AT5G44600, AT5G44820, AT5G44990, AT5G45000, AT5G45070, AT5G45080, AT5G45090, AT5G45100, AT5G45110, AT5G45440, AT5G45475, AT5G45480, AT5G45500, AT5G45510, AT5G45630, AT5G45650, AT5G45680, AT5G45820, AT5G45830, AT5G45840, AT5G46220, AT5G46230, AT5G46410, AT5G46500, AT5G46520, AT5G46580, AT5G46600, AT5G46960, AT5G47070, AT5G47130, AT5G47140, AT5G47240, AT5G47330, AT5G47370, AT5G47440, AT5G47730, AT5G47900, AT5G47960, AT5G48290, AT5G48400, AT5G48410, AT5G48545, AT5G48657, AT5G48820, AT5G48850, AT5G48910, AT5G49280, AT5G49390, AT5G49448, AT5G49450, AT5G49680, AT5G49730, AT5G49740, AT5G50450, AT5G50950, AT5G51060, AT5G51390, AT5G51550, AT5G51630, AT5G51720, AT5G51740, AT5G51830, AT5G51910, AT5G51950, AT5G51970, AT5G52020, AT5G52100, AT5G52120, AT5G52310, AT5G52570, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52770, AT5G52800, AT5G52810, AT5G52820, AT5G52970, AT5G53110, AT5G53360, AT5G53588, AT5G53590, AT5G53830, AT5G54040, AT5G54060, AT5G54140, AT5G54145, AT5G54148, AT5G54170, AT5G54270, AT5G54300, AT5G54490, AT5G54700, AT5G54710, AT5G54720, AT5G54840, AT5G54980, AT5G55170, AT5G55180, AT5G55420, AT5G55450, AT5G55460, AT5G55560, AT5G55740, AT5G56050, AT5G56100, AT5G56340, AT5G56544, AT5G56550, AT5G56580, AT5G56850, AT5G56960, AT5G56970, AT5G57050, AT5G57100, AT5G57150, AT5G57170, AT5G57340, AT5G57510, AT5G57550, AT5G57560, AT5G57630, AT5G57660, AT5G57800, AT5G57880, AT5G57887, AT5G57910, AT5G57970, AT5G58260, AT5G58310, AT5G58570, AT5G58620, AT5G58770, AT5G58840, AT5G58900, AT5G58940, AT5G59130, AT5G59220, AT5G59310, AT5G59490, AT5G59510, AT5G59530, AT5G59570, AT5G59730, AT5G59750, AT5G59820, AT5G60280, AT5G60285, AT5G60400, AT5G60680, AT5G60790, AT5G60800, AT5G60900, AT5G60930, AT5G61010, AT5G61070, AT5G61250, AT5G61350, AT5G61390, AT5G61430, AT5G61590, AT5G61890, AT5G61900, AT5G61910, AT5G62020, AT5G62140, AT5G62150, AT5G62170, AT5G62180, AT5G62350, AT5G62430, AT5G62480, AT5G62720, AT5G62730, AT5G62770, AT5G62820, AT5G62840, AT5G63130, AT5G63160, AT5G63225, AT5G63240, AT5G63380, AT5G63500, AT5G63700, AT5G63780, AT5G63800, AT5G63810, AT5G63820, AT5G64000, AT5G64040, AT5G64170, AT5G64250, AT5G64380, AT5G64530, AT5G64700, AT5G64780, AT5G64800, AT5G64810, AT5G64850, AT5G64870, AT5G65090, AT5G65609, AT5G65925, AT5G66350, AT5G66520, AT5G66590, AT5G66600, AT5G66620, AT5G66630, AT5G66640, AT5G66650, AT5G66658, AT5G66880, AT5G66890, AT5G66910, AT5G67080, AT5G67100, AT5G67150, AT5G67300, AT5G67340, AT5G67350, AT5G67370, AT5G67470, AT5G67480, AT5G67600, ATCG00640, ATMG00040, ATMG00280
## 37 NA
## 38 NA
## 39 AT1G01010, AT1G01190, AT1G01390, AT1G01640, AT1G01680, AT1G01690, AT1G02520, AT1G02610, AT1G02660, AT1G03010, AT1G03130, AT1G03200, AT1G03600, AT1G03630, AT1G03680, AT1G03990, AT1G04250, AT1G04310, AT1G04600, AT1G04770, AT1G05100, AT1G05675, AT1G05840, AT1G06040, AT1G06460, AT1G06620, AT1G06680, AT1G07050, AT1G07280, AT1G07440, AT1G07500, AT1G07570, AT1G08050, AT1G08380, AT1G09310, AT1G09340, AT1G09350, AT1G09930, AT1G09932, AT1G10020, AT1G10150, AT1G10586, AT1G10760, AT1G10960, AT1G11400, AT1G12090, AT1G12160, AT1G12380, AT1G12540, AT1G12710, AT1G12730, AT1G12845, AT1G12900, AT1G13150, AT1G13245, AT1G13260, AT1G13310, AT1G13330, AT1G13340, AT1G13650, AT1G13830, AT1G14150, AT1G14160, AT1G14200, AT1G14250, AT1G14345, AT1G14700, AT1G14740, AT1G15350, AT1G15810, AT1G15820, AT1G15830, AT1G15980, AT1G15990, AT1G17147, AT1G17380, AT1G17750, AT1G17830, AT1G17970, AT1G18020, AT1G18200, AT1G18330, AT1G18485, AT1G18870, AT1G19150, AT1G19180, AT1G19540, AT1G19640, AT1G19650, AT1G19680, AT1G20010, AT1G20020, AT1G20310, AT1G20340, AT1G20460, AT1G21130, AT1G21240, AT1G21500, AT1G21550, AT1G21740, AT1G21910, AT1G22220, AT1G22370, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23060, AT1G23390, AT1G23740, AT1G23850, AT1G24020, AT1G25400, AT1G25560, AT1G26730, AT1G26770, AT1G26800, AT1G26930, AT1G27330, AT1G27480, AT1G28130, AT1G28370, AT1G29640, AT1G29670, AT1G29910, AT1G29920, AT1G30100, AT1G30160, AT1G30380, AT1G30850, AT1G31120, AT1G31330, AT1G31690, AT1G31770, AT1G31900, AT1G32060, AT1G32080, AT1G32220, AT1G32870, AT1G33110, AT1G33170, AT1G33475, AT1G33600, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G35140, AT1G36370, AT1G37130, AT1G43160, AT1G43245, AT1G43310, AT1G43670, AT1G43910, AT1G44130, AT1G44446, AT1G44575, AT1G47510, AT1G47890, AT1G48315, AT1G48320, AT1G48605, AT1G49200, AT1G49520, AT1G49530, AT1G50590, AT1G51080, AT1G51110, AT1G51610, AT1G51760, AT1G51780, AT1G51805, AT1G51860, AT1G52030, AT1G52200, AT1G52220, AT1G52230, AT1G52510, AT1G52565, AT1G52890, AT1G53163, AT1G53830, AT1G54010, AT1G54030, AT1G54095, AT1G54410, AT1G54780, AT1G54790, AT1G54820, AT1G55330, AT1G55370, AT1G55450, AT1G55610, AT1G55670, AT1G56300, AT1G56340, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G57990, AT1G58030, AT1G59640, AT1G59860, AT1G60190, AT1G60730, AT1G60800, AT1G61110, AT1G61120, AT1G61190, AT1G61215, AT1G61260, AT1G61300, AT1G61340, AT1G61520, AT1G61550, AT1G62520, AT1G63840, AT1G64760, AT1G64770, AT1G65230, AT1G65390, AT1G65690, AT1G65730, AT1G65845, AT1G65890, AT1G66130, AT1G66230, AT1G66280, AT1G66350, AT1G66910, AT1G66930, AT1G66960, AT1G67340, AT1G67420, AT1G67590, AT1G67635, AT1G67740, AT1G67820, AT1G67910, AT1G68050, AT1G68110, AT1G68840, AT1G69140, AT1G69260, AT1G69360, AT1G69480, AT1G69530, AT1G69570, AT1G69572, AT1G69830, AT1G69890, AT1G70090, AT1G70420, AT1G70580, AT1G70690, AT1G70790, AT1G70820, AT1G71000, AT1G71030, AT1G71390, AT1G71970, AT1G72210, AT1G72416, AT1G72540, AT1G72600, AT1G72610, AT1G72640, AT1G72700, AT1G72770, AT1G73130, AT1G73210, AT1G73470, AT1G73480, AT1G73600, AT1G73602, AT1G73750, AT1G73870, AT1G74070, AT1G74100, AT1G74430, AT1G74710, AT1G74730, AT1G74940, AT1G75280, AT1G75450, AT1G75540, AT1G75580, AT1G75690, AT1G75900, AT1G76080, AT1G76100, AT1G76600, AT1G76620, AT1G76640, AT1G76690, AT1G76980, AT1G77210, AT1G77280, AT1G77760, AT1G78000, AT1G78290, AT1G78600, AT1G78780, AT1G78830, AT1G78990, AT1G78995, AT1G79270, AT1G79310, AT1G79330, AT1G80110, AT1G80280, AT1G80440, AT1G80590, AT1G80840, AT1G80920, AT2G01010, AT2G01020, AT2G01590, AT2G01755, AT2G01830, AT2G01870, AT2G01890, AT2G01918, AT2G02070, AT2G02340, AT2G02450, AT2G03310, AT2G03410, AT2G03420, AT2G03440, AT2G03550, AT2G03750, AT2G04070, AT2G04430, AT2G04450, AT2G04790, AT2G04795, AT2G05070, AT2G05100, AT2G05160, AT2G05940, AT2G06255, AT2G06520, AT2G13360, AT2G14620, AT2G15090, AT2G15760, AT2G15890, AT2G15970, AT2G16270, AT2G16365, AT2G16650, AT2G16720, AT2G17230, AT2G17500, AT2G17880, AT2G18160, AT2G18162, AT2G18300, AT2G18350, AT2G18560, AT2G18660, AT2G18700, AT2G19310, AT2G20110, AT2G20142, AT2G21130, AT2G21188, AT2G21320, AT2G21330, AT2G21970, AT2G22200, AT2G22330, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G23170, AT2G23290, AT2G23840, AT2G24240, AT2G24550, AT2G24580, AT2G24645, AT2G25200, AT2G25690, AT2G25735, AT2G25900, AT2G26150, AT2G26300, AT2G26390, AT2G26400, AT2G26480, AT2G26560, AT2G26710, AT2G26870, AT2G27228, AT2G27230, AT2G27300, AT2G27385, AT2G27420, AT2G28110, AT2G28120, AT2G28450, AT2G28570, AT2G28605, AT2G28900, AT2G29100, AT2G29170, AT2G29290, AT2G29300, AT2G29310, AT2G29360, AT2G29630, AT2G29650, AT2G29750, AT2G30020, AT2G30070, AT2G30150, AT2G30420, AT2G30540, AT2G30570, AT2G30615, AT2G30770, AT2G30820, AT2G30830, AT2G31040, AT2G31180, AT2G31945, AT2G32100, AT2G32130, AT2G32140, AT2G32460, AT2G32500, AT2G32640, AT2G32930, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34410, AT2G34420, AT2G34430, AT2G34620, AT2G35660, AT2G35940, AT2G35945, AT2G35950, AT2G36145, AT2G36390, AT2G36640, AT2G37070, AT2G37440, AT2G37530, AT2G37540, AT2G37585, AT2G37750, AT2G37950, AT2G38240, AT2G38250, AT2G38400, AT2G38480, AT2G38490, AT2G38500, AT2G38760, AT2G38800, AT2G39300, AT2G39400, AT2G39435, AT2G39730, AT2G39800, AT2G39900, AT2G39980, AT2G40000, AT2G40080, AT2G40100, AT2G40150, AT2G40200, AT2G40330, AT2G40340, AT2G40460, AT2G40550, AT2G40610, AT2G40670, AT2G40840, AT2G40960, AT2G41070, AT2G41430, AT2G42060, AT2G42485, AT2G42530, AT2G42540, AT2G42890, AT2G43000, AT2G43010, AT2G43120, AT2G43290, AT2G43320, AT2G43570, AT2G43620, AT2G43680, AT2G44130, AT2G44490, AT2G44578, AT2G44600, AT2G44840, AT2G44940, AT2G45180, AT2G45245, AT2G45560, AT2G45760, AT2G45850, AT2G45920, AT2G46040, AT2G46240, AT2G46400, AT2G46410, AT2G46510, AT2G46520, AT2G46660, AT2G46790, AT2G46820, AT2G46830, AT2G46970, AT2G47000, AT2G47420, AT2G47770, AT2G47820, AT2G47920, AT2G47950, AT3G01060, AT3G01440, AT3G01500, AT3G01770, AT3G01810, AT3G02210, AT3G02550, AT3G02730, AT3G02885, AT3G02990, AT3G03310, AT3G03440, AT3G04000, AT3G04210, AT3G04300, AT3G04380, AT3G04420, AT3G05500, AT3G06020, AT3G06070, AT3G06145, AT3G06160, AT3G06490, AT3G06890, AT3G07200, AT3G07310, AT3G07320, AT3G07350, AT3G08000, AT3G08920, AT3G08940, AT3G09440, AT3G09580, AT3G09600, AT3G09960, AT3G10020, AT3G10060, AT3G10520, AT3G10720, AT3G10815, AT3G10940, AT3G11090, AT3G11110, AT3G11210, AT3G11450, AT3G11480, AT3G12860, AT3G12920, AT3G13080, AT3G13100, AT3G13380, AT3G13470, AT3G13610, AT3G13730, AT3G14200, AT3G14440, AT3G14680, AT3G14700, AT3G14870, AT3G15536, AT3G15570, AT3G15630, AT3G15840, AT3G15950, AT3G16130, AT3G16250, AT3G16310, AT3G16460, AT3G16620, AT3G17280, AT3G17390, AT3G17420, AT3G17510, AT3G17640, AT3G17690, AT3G17840, AT3G17860, AT3G18050, AT3G18080, AT3G18500, AT3G18710, AT3G18773, AT3G18890, AT3G19000, AT3G19002, AT3G19100, AT3G19680, AT3G19970, AT3G20250, AT3G21055, AT3G21080, AT3G21320, AT3G21500, AT3G21670, AT3G21700, AT3G21780, AT3G21950, AT3G22160, AT3G22210, AT3G22275, AT3G22290, AT3G23880, AT3G24430, AT3G24515, AT3G24518, AT3G24520, AT3G25010, AT3G25120, AT3G25510, AT3G25670, AT3G25890, AT3G26180, AT3G26290, AT3G26440, AT3G26470, AT3G26510, AT3G26740, AT3G27170, AT3G27690, AT3G27810, AT3G27870, AT3G28510, AT3G28580, AT3G29320, AT3G29330, AT3G43250, AT3G44300, AT3G44717, AT3G45970, AT3G46370, AT3G46630, AT3G46640, AT3G46658, AT3G46660, AT3G46780, AT3G46970, AT3G47070, AT3G47420, AT3G47460, AT3G47470, AT3G47480, AT3G47500, AT3G47730, AT3G48090, AT3G48100, AT3G48115, AT3G48200, AT3G48280, AT3G48420, AT3G48520, AT3G48580, AT3G48630, AT3G48700, AT3G48720, AT3G48780, AT3G49570, AT3G49580, AT3G49790, AT3G50060, AT3G50770, AT3G50820, AT3G50840, AT3G50920, AT3G50930, AT3G50960, AT3G51080, AT3G51090, AT3G51400, AT3G51470, AT3G51670, AT3G51750, AT3G51860, AT3G52070, AT3G52072, AT3G52180, AT3G52430, AT3G52960, AT3G53210, AT3G53470, AT3G53800, AT3G53830, AT3G54320, AT3G54366, AT3G54490, AT3G54500, AT3G54890, AT3G55240, AT3G55500, AT3G55580, AT3G55630, AT3G55760, AT3G55800, AT3G55970, AT3G56160, AT3G56170, AT3G56260, AT3G56290, AT3G56940, AT3G57260, AT3G57380, AT3G57460, AT3G57740, AT3G57950, AT3G59060, AT3G59750, AT3G59870, AT3G59900, AT3G59930, AT3G59940, AT3G60390, AT3G60420, AT3G60470, AT3G60490, AT3G60961, AT3G60966, AT3G61060, AT3G61190, AT3G61198, AT3G61420, AT3G61430, AT3G61450, AT3G61470, AT3G61550, AT3G61760, AT3G61870, AT3G61890, AT3G61930, AT3G62410, AT3G62550, AT3G62950, AT3G63010, AT3G63140, AT3G63160, AT3G63380, AT4G00165, AT4G00700, AT4G00970, AT4G01330, AT4G01430, AT4G01535, AT4G01540, AT4G01670, AT4G02075, AT4G02380, AT4G02760, AT4G02770, AT4G03400, AT4G03460, AT4G03510, AT4G04020, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04810, AT4G04830, AT4G05010, AT4G05020, AT4G05070, AT4G05100, AT4G05180, AT4G06534, AT4G06744, AT4G08950, AT4G09010, AT4G09650, AT4G09750, AT4G09760, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10500, AT4G11240, AT4G11300, AT4G11350, AT4G11360, AT4G11521, AT4G11990, AT4G12320, AT4G12330, AT4G12390, AT4G12480, AT4G12490, AT4G12500, AT4G12720, AT4G12800, AT4G12830, AT4G12900, AT4G12980, AT4G13010, AT4G13340, AT4G13810, AT4G14270, AT4G14560, AT4G14630, AT4G14830, AT4G15210, AT4G15233, AT4G15248, AT4G15280, AT4G15417, AT4G15430, AT4G15780, AT4G15975, AT4G16146, AT4G16260, AT4G16350, AT4G16515, AT4G16880, AT4G16980, AT4G17100, AT4G17460, AT4G17660, AT4G17670, AT4G17730, AT4G17810, AT4G18205, AT4G18220, AT4G19170, AT4G19530, AT4G20320, AT4G20820, AT4G20840, AT4G21280, AT4G21445, AT4G21680, AT4G21790, AT4G21870, AT4G21990, AT4G22070, AT4G22560, AT4G22690, AT4G22890, AT4G23150, AT4G23180, AT4G23300, AT4G23310, AT4G23420, AT4G23800, AT4G23810, AT4G24240, AT4G25290, AT4G25390, AT4G25433, AT4G25480, AT4G25810, AT4G25940, AT4G26080, AT4G26120, AT4G26470, AT4G26520, AT4G26530, AT4G27030, AT4G27310, AT4G27440, AT4G27590, AT4G27700, AT4G27860, AT4G27870, AT4G28240, AT4G28270, AT4G28703, AT4G28750, AT4G29190, AT4G29380, AT4G29740, AT4G29930, AT4G30180, AT4G30650, AT4G32280, AT4G32340, AT4G32590, AT4G32980, AT4G33010, AT4G33150, AT4G33490, AT4G33625, AT4G33660, AT4G33980, AT4G34200, AT4G34220, AT4G34250, AT4G34630, AT4G34650, AT4G34900, AT4G35600, AT4G35720, AT4G36010, AT4G36040, AT4G36430, AT4G36530, AT4G36640, AT4G36780, AT4G36950, AT4G37110, AT4G37260, AT4G37390, AT4G37610, AT4G37850, AT4G37900, AT4G37925, AT4G38550, AT4G38552, AT4G38560, AT4G38770, AT4G39030, AT4G39190, AT4G39260, AT4G39580, AT4G39710, AT4G39730, AT4G39950, AT5G01015, AT5G01520, AT5G01530, AT5G01840, AT5G01850, AT5G02100, AT5G02160, AT5G02170, AT5G02180, AT5G02760, AT5G02810, AT5G02890, AT5G03210, AT5G03285, AT5G03360, AT5G03435, AT5G03668, AT5G03670, AT5G03680, AT5G04860, AT5G04950, AT5G05090, AT5G05330, AT5G05440, AT5G05580, AT5G05680, AT5G05890, AT5G06110, AT5G06230, AT5G06290, AT5G06610, AT5G06690, AT5G06980, AT5G07580, AT5G07650, AT5G08150, AT5G08410, AT5G08620, AT5G09660, AT5G10250, AT5G10340, AT5G10380, AT5G10690, AT5G11070, AT5G11210, AT5G11242, AT5G11390, AT5G11870, AT5G12110, AT5G12950, AT5G13210, AT5G13220, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14390, AT5G14700, AT5G14760, AT5G15190, AT5G16170, AT5G16350, AT5G16360, AT5G16370, AT5G16400, AT5G16810, AT5G17330, AT5G17490, AT5G17760, AT5G18660, AT5G19110, AT5G19120, AT5G19190, AT5G19940, AT5G20250, AT5G20700, AT5G20960, AT5G21280, AT5G21430, AT5G21940, AT5G21950, AT5G22545, AT5G22630, AT5G22920, AT5G23160, AT5G23210, AT5G23235, AT5G23240, AT5G23360, AT5G23380, AT5G23590, AT5G24090, AT5G24120, AT5G24155, AT5G24200, AT5G24240, AT5G24280, AT5G24290, AT5G24300, AT5G24460, AT5G24470, AT5G24660, AT5G24890, AT5G24910, AT5G25130, AT5G25240, AT5G25280, AT5G26170, AT5G26220, AT5G26230, AT5G26270, AT5G26920, AT5G27290, AT5G28610, AT5G28630, AT5G28910, AT5G28919, AT5G28920, AT5G33355, AT5G35480, AT5G35970, AT5G38130, AT5G38250, AT5G38350, AT5G38410, AT5G38510, AT5G38980, AT5G38990, AT5G39020, AT5G39080, AT5G39210, AT5G39530, AT5G39610, AT5G39670, AT5G39860, AT5G40210, AT5G40500, AT5G41050, AT5G41180, AT5G41315, AT5G41610, AT5G41612, AT5G41730, AT5G42050, AT5G42200, AT5G43170, AT5G43440, AT5G43750, AT5G44060, AT5G44070, AT5G44260, AT5G44350, AT5G44380, AT5G44390, AT5G44410, AT5G44460, AT5G44680, AT5G44990, AT5G45070, AT5G45080, AT5G45090, AT5G45110, AT5G45630, AT5G45670, AT5G45680, AT5G45820, AT5G45830, AT5G46110, AT5G46220, AT5G46410, AT5G46600, AT5G46840, AT5G47370, AT5G47960, AT5G48400, AT5G48410, AT5G48545, AT5G48570, AT5G48850, AT5G48880, AT5G49100, AT5G49448, AT5G49450, AT5G49560, AT5G49730, AT5G49900, AT5G50450, AT5G50740, AT5G51380, AT5G51460, AT5G51550, AT5G51720, AT5G51910, AT5G52100, AT5G52720, AT5G52730, AT5G52882, AT5G53290, AT5G53360, AT5G54145, AT5G54148, AT5G54240, AT5G54270, AT5G54280, AT5G54585, AT5G54700, AT5G54770, AT5G55740, AT5G56010, AT5G56050, AT5G56544, AT5G56550, AT5G56880, AT5G57170, AT5G57320, AT5G57560, AT5G57660, AT5G58310, AT5G58570, AT5G58620, AT5G59130, AT5G59220, AT5G59480, AT5G59580, AT5G59590, AT5G59780, AT5G60100, AT5G60270, AT5G60310, AT5G60400, AT5G60680, AT5G60800, AT5G60890, AT5G61160, AT5G61270, AT5G61350, AT5G61440, AT5G61590, AT5G61600, AT5G61900, AT5G61960, AT5G62140, AT5G62150, AT5G62190, AT5G62280, AT5G62430, AT5G62480, AT5G62720, AT5G62730, AT5G62920, AT5G63140, AT5G63225, AT5G63380, AT5G63450, AT5G63700, AT5G63780, AT5G63820, AT5G64040, AT5G64170, AT5G64530, AT5G64570, AT5G64572, AT5G64700, AT5G64810, AT5G65207, AT5G65280, AT5G65380, AT5G66052, AT5G66053, AT5G66170, AT5G66520, AT5G66570, AT5G66580, AT5G66630, AT5G66650, AT5G67080, AT5G67160, AT5G67200, AT5G67370, AT5G67420, ATCG00010, ATCG00020, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01060, ATCG01160, ATCG01170, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020
## 40 NA
## 41 NA
## 42 AT1G01010, AT1G01190, AT1G01390, AT1G01640, AT1G01680, AT1G01690, AT1G02520, AT1G02610, AT1G02660, AT1G03010, AT1G03130, AT1G03600, AT1G03630, AT1G03680, AT1G03990, AT1G04250, AT1G04310, AT1G04600, AT1G04770, AT1G05100, AT1G05675, AT1G05840, AT1G06040, AT1G06460, AT1G06620, AT1G06680, AT1G07440, AT1G07500, AT1G07570, AT1G08050, AT1G08380, AT1G09340, AT1G09350, AT1G09930, AT1G10150, AT1G10586, AT1G10760, AT1G10960, AT1G11400, AT1G12090, AT1G12160, AT1G12540, AT1G12710, AT1G12730, AT1G12900, AT1G13150, AT1G13245, AT1G13260, AT1G13330, AT1G13340, AT1G13830, AT1G13930, AT1G14150, AT1G14160, AT1G14200, AT1G14250, AT1G14345, AT1G14700, AT1G14740, AT1G15350, AT1G15810, AT1G15820, AT1G15980, AT1G15990, AT1G17380, AT1G17750, AT1G17970, AT1G18000, AT1G18010, AT1G18020, AT1G18200, AT1G18330, AT1G18870, AT1G19150, AT1G19180, AT1G19540, AT1G19640, AT1G19650, AT1G19680, AT1G20010, AT1G20020, AT1G20340, AT1G21130, AT1G21240, AT1G21500, AT1G21740, AT1G21910, AT1G22220, AT1G22370, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23390, AT1G23740, AT1G24020, AT1G25275, AT1G25560, AT1G26730, AT1G26770, AT1G26800, AT1G26930, AT1G27480, AT1G28130, AT1G28370, AT1G29430, AT1G29440, AT1G29460, AT1G29500, AT1G29510, AT1G29640, AT1G29670, AT1G29910, AT1G29920, AT1G30100, AT1G30160, AT1G30380, AT1G31120, AT1G31330, AT1G31690, AT1G31770, AT1G31900, AT1G32060, AT1G32080, AT1G32220, AT1G32870, AT1G33110, AT1G33170, AT1G33475, AT1G33600, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G35140, AT1G36370, AT1G37130, AT1G43160, AT1G43245, AT1G43310, AT1G43670, AT1G43910, AT1G44130, AT1G44446, AT1G44575, AT1G47510, AT1G47890, AT1G48315, AT1G48320, AT1G48605, AT1G49200, AT1G49520, AT1G49530, AT1G51110, AT1G51400, AT1G51610, AT1G51760, AT1G51780, AT1G51805, AT1G51860, AT1G52030, AT1G52200, AT1G52230, AT1G52510, AT1G52890, AT1G53163, AT1G53830, AT1G54010, AT1G54030, AT1G54410, AT1G54780, AT1G54790, AT1G54820, AT1G55370, AT1G55450, AT1G55610, AT1G55670, AT1G56300, AT1G56340, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G57990, AT1G58030, AT1G59640, AT1G59860, AT1G60190, AT1G60730, AT1G60800, AT1G61110, AT1G61120, AT1G61190, AT1G61300, AT1G61340, AT1G61520, AT1G61550, AT1G63840, AT1G64760, AT1G64770, AT1G65390, AT1G65690, AT1G65730, AT1G65890, AT1G66130, AT1G66230, AT1G66280, AT1G66350, AT1G66910, AT1G66930, AT1G66960, AT1G67340, AT1G67420, AT1G67635, AT1G67740, AT1G67820, AT1G68050, AT1G68110, AT1G68840, AT1G69140, AT1G69260, AT1G69480, AT1G69530, AT1G69570, AT1G69572, AT1G69830, AT1G69890, AT1G70090, AT1G70420, AT1G70580, AT1G70690, AT1G70790, AT1G70820, AT1G71000, AT1G71030, AT1G71390, AT1G72210, AT1G72416, AT1G72430, AT1G72540, AT1G72600, AT1G72610, AT1G72640, AT1G72700, AT1G72770, AT1G73480, AT1G73600, AT1G73602, AT1G73750, AT1G73870, AT1G74070, AT1G74100, AT1G74430, AT1G74710, AT1G74730, AT1G74940, AT1G75280, AT1G75450, AT1G75540, AT1G75580, AT1G75690, AT1G75900, AT1G76080, AT1G76100, AT1G76600, AT1G76620, AT1G76690, AT1G77210, AT1G77280, AT1G77760, AT1G78000, AT1G78290, AT1G78600, AT1G78830, AT1G78990, AT1G79270, AT1G79310, AT1G79330, AT1G80110, AT1G80280, AT1G80440, AT1G80590, AT1G80840, AT1G80920, AT2G01010, AT2G01020, AT2G01590, AT2G01830, AT2G01890, AT2G01918, AT2G02070, AT2G02340, AT2G02450, AT2G03440, AT2G03550, AT2G03750, AT2G04070, AT2G04430, AT2G04450, AT2G04795, AT2G05070, AT2G05100, AT2G05940, AT2G06255, AT2G06520, AT2G13360, AT2G14610, AT2G14620, AT2G15090, AT2G15890, AT2G15970, AT2G16365, AT2G16650, AT2G16720, AT2G17230, AT2G17500, AT2G17880, AT2G18160, AT2G18162, AT2G18300, AT2G18350, AT2G18560, AT2G18660, AT2G18700, AT2G19310, AT2G20110, AT2G20142, AT2G21130, AT2G21188, AT2G21320, AT2G21330, AT2G21970, AT2G22200, AT2G22330, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G23170, AT2G23290, AT2G23840, AT2G24240, AT2G24580, AT2G24645, AT2G25900, AT2G26150, AT2G26300, AT2G26390, AT2G26400, AT2G26480, AT2G26560, AT2G26710, AT2G26870, AT2G27228, AT2G27230, AT2G27300, AT2G27420, AT2G28110, AT2G28120, AT2G28450, AT2G28605, AT2G28900, AT2G29100, AT2G29170, AT2G29290, AT2G29300, AT2G29310, AT2G29360, AT2G29630, AT2G29650, AT2G29750, AT2G30020, AT2G30070, AT2G30150, AT2G30420, AT2G30540, AT2G30570, AT2G30770, AT2G30830, AT2G31040, AT2G31180, AT2G32100, AT2G32130, AT2G32140, AT2G32460, AT2G32640, AT2G32930, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34410, AT2G34420, AT2G34430, AT2G34620, AT2G35660, AT2G35940, AT2G35945, AT2G35950, AT2G36390, AT2G36430, AT2G36640, AT2G37440, AT2G37530, AT2G37540, AT2G37585, AT2G37950, AT2G38240, AT2G38250, AT2G38400, AT2G38480, AT2G38490, AT2G38760, AT2G38800, AT2G39400, AT2G39435, AT2G39730, AT2G39800, AT2G39900, AT2G39980, AT2G40000, AT2G40080, AT2G40100, AT2G40150, AT2G40200, AT2G40330, AT2G40340, AT2G40460, AT2G40550, AT2G40610, AT2G40670, AT2G40840, AT2G41070, AT2G41430, AT2G42060, AT2G42485, AT2G42530, AT2G42540, AT2G42890, AT2G43000, AT2G43010, AT2G43120, AT2G43320, AT2G43570, AT2G43620, AT2G43680, AT2G44130, AT2G44490, AT2G44840, AT2G44940, AT2G45180, AT2G45245, AT2G45560, AT2G45760, AT2G45850, AT2G45920, AT2G46040, AT2G46240, AT2G46400, AT2G46410, AT2G46510, AT2G46520, AT2G46660, AT2G46790, AT2G46820, AT2G46830, AT2G46900, AT2G46970, AT2G47000, AT2G47420, AT2G47770, AT2G47920, AT3G01060, AT3G01440, AT3G01500, AT3G01770, AT3G01810, AT3G02210, AT3G02550, AT3G02730, AT3G02885, AT3G02990, AT3G03310, AT3G03440, AT3G04000, AT3G04210, AT3G04380, AT3G04420, AT3G05500, AT3G06020, AT3G06160, AT3G06490, AT3G07200, AT3G07320, AT3G07350, AT3G08940, AT3G09440, AT3G09580, AT3G09600, AT3G09960, AT3G10020, AT3G10060, AT3G10520, AT3G10720, AT3G10940, AT3G11110, AT3G11210, AT3G11450, AT3G11480, AT3G12860, AT3G12920, AT3G13080, AT3G13100, AT3G13380, AT3G13470, AT3G13610, AT3G13730, AT3G14200, AT3G14440, AT3G14680, AT3G14700, AT3G14870, AT3G15536, AT3G15570, AT3G15840, AT3G15950, AT3G16130, AT3G16250, AT3G16310, AT3G16460, AT3G16620, AT3G17390, AT3G17420, AT3G17510, AT3G17640, AT3G17690, AT3G17840, AT3G17860, AT3G18080, AT3G18500, AT3G18710, AT3G18773, AT3G18890, AT3G19000, AT3G19002, AT3G19100, AT3G19680, AT3G20250, AT3G21055, AT3G21500, AT3G21670, AT3G21700, AT3G21780, AT3G21950, AT3G22275, AT3G24430, AT3G24515, AT3G24518, AT3G24520, AT3G25010, AT3G25120, AT3G25510, AT3G25670, AT3G25890, AT3G26180, AT3G26290, AT3G26440, AT3G26510, AT3G27170, AT3G27690, AT3G27810, AT3G27870, AT3G28510, AT3G28580, AT3G29320, AT3G44300, AT3G44717, AT3G45970, AT3G46370, AT3G46630, AT3G46640, AT3G46658, AT3G46660, AT3G46780, AT3G46970, AT3G47070, AT3G47420, AT3G47460, AT3G47470, AT3G47500, AT3G47730, AT3G48090, AT3G48100, AT3G48115, AT3G48280, AT3G48420, AT3G48520, AT3G48580, AT3G48700, AT3G48720, AT3G48780, AT3G49580, AT3G50060, AT3G50820, AT3G50840, AT3G50920, AT3G50930, AT3G50960, AT3G51080, AT3G51400, AT3G51470, AT3G51670, AT3G51860, AT3G52072, AT3G52180, AT3G52430, AT3G52960, AT3G53210, AT3G53800, AT3G54320, AT3G54366, AT3G54490, AT3G54500, AT3G54890, AT3G55240, AT3G55500, AT3G55580, AT3G55630, AT3G55760, AT3G55800, AT3G55970, AT3G56160, AT3G56170, AT3G56290, AT3G56940, AT3G57260, AT3G57380, AT3G57460, AT3G57740, AT3G59060, AT3G59750, AT3G59900, AT3G59930, AT3G59940, AT3G60390, AT3G60420, AT3G60470, AT3G60490, AT3G60961, AT3G61060, AT3G61190, AT3G61198, AT3G61420, AT3G61430, AT3G61450, AT3G61470, AT3G61550, AT3G61760, AT3G61890, AT3G61930, AT3G62410, AT3G62550, AT3G62950, AT3G63010, AT3G63140, AT3G63380, AT4G00165, AT4G00970, AT4G01330, AT4G01430, AT4G01540, AT4G02075, AT4G02380, AT4G02770, AT4G03400, AT4G03460, AT4G03510, AT4G04020, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04810, AT4G04830, AT4G05020, AT4G05100, AT4G05180, AT4G06534, AT4G06744, AT4G08950, AT4G09010, AT4G09650, AT4G09750, AT4G09760, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10500, AT4G11240, AT4G11350, AT4G11360, AT4G11521, AT4G11990, AT4G12320, AT4G12330, AT4G12390, AT4G12480, AT4G12490, AT4G12500, AT4G12720, AT4G12800, AT4G12830, AT4G12900, AT4G12980, AT4G13010, AT4G13340, AT4G13810, AT4G14270, AT4G14560, AT4G14630, AT4G15210, AT4G15233, AT4G15248, AT4G15280, AT4G15417, AT4G15430, AT4G15780, AT4G15975, AT4G16260, AT4G16350, AT4G16515, AT4G17100, AT4G17460, AT4G17660, AT4G17730, AT4G17810, AT4G18205, AT4G18220, AT4G19170, AT4G19530, AT4G20320, AT4G20820, AT4G20840, AT4G21280, AT4G21445, AT4G21680, AT4G21790, AT4G21870, AT4G21990, AT4G22070, AT4G22690, AT4G22890, AT4G23150, AT4G23180, AT4G23300, AT4G23310, AT4G23420, AT4G23800, AT4G23810, AT4G24240, AT4G25290, AT4G25390, AT4G25433, AT4G25480, AT4G25810, AT4G25940, AT4G26080, AT4G26120, AT4G26470, AT4G26520, AT4G26530, AT4G27030, AT4G27310, AT4G27440, AT4G27590, AT4G27700, AT4G27860, AT4G27870, AT4G28270, AT4G28703, AT4G28750, AT4G29190, AT4G29380, AT4G29740, AT4G29930, AT4G30180, AT4G30650, AT4G32280, AT4G32340, AT4G32590, AT4G32980, AT4G33010, AT4G33150, AT4G33490, AT4G33660, AT4G33980, AT4G34200, AT4G34220, AT4G34250, AT4G34650, AT4G34900, AT4G35600, AT4G35720, AT4G36010, AT4G36040, AT4G36430, AT4G36530, AT4G36640, AT4G36780, AT4G36950, AT4G37110, AT4G37260, AT4G37390, AT4G37610, AT4G37850, AT4G37900, AT4G37925, AT4G38550, AT4G38552, AT4G38560, AT4G38770, AT4G39030, AT4G39260, AT4G39580, AT4G39710, AT4G39730, AT4G39950, AT5G01520, AT5G01530, AT5G01840, AT5G01850, AT5G02100, AT5G02170, AT5G02180, AT5G02760, AT5G02810, AT5G02890, AT5G03210, AT5G03285, AT5G03360, AT5G03435, AT5G03668, AT5G03670, AT5G03680, AT5G04950, AT5G05090, AT5G05330, AT5G05440, AT5G05580, AT5G05680, AT5G05890, AT5G06110, AT5G06230, AT5G06290, AT5G06610, AT5G06690, AT5G06980, AT5G07580, AT5G07650, AT5G08150, AT5G08410, AT5G08620, AT5G09660, AT5G10250, AT5G10340, AT5G10380, AT5G11210, AT5G11242, AT5G11870, AT5G12110, AT5G12950, AT5G13210, AT5G13220, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14090, AT5G14700, AT5G14760, AT5G16170, AT5G16350, AT5G16360, AT5G16370, AT5G16400, AT5G16810, AT5G17330, AT5G17490, AT5G17760, AT5G18030, AT5G18080, AT5G18660, AT5G19110, AT5G19120, AT5G20250, AT5G20960, AT5G21280, AT5G21430, AT5G21940, AT5G22630, AT5G22920, AT5G23210, AT5G23235, AT5G23240, AT5G23590, AT5G24090, AT5G24120, AT5G24155, AT5G24200, AT5G24240, AT5G24280, AT5G24290, AT5G24300, AT5G24470, AT5G24660, AT5G24910, AT5G25130, AT5G26170, AT5G26220, AT5G26230, AT5G26920, AT5G27290, AT5G33355, AT5G35970, AT5G38130, AT5G38250, AT5G38350, AT5G38410, AT5G38510, AT5G38990, AT5G39020, AT5G39080, AT5G39210, AT5G39610, AT5G39860, AT5G40210, AT5G41180, AT5G41315, AT5G41610, AT5G41612, AT5G41730, AT5G42050, AT5G42200, AT5G43170, AT5G43440, AT5G43750, AT5G44070, AT5G44260, AT5G44380, AT5G44390, AT5G44410, AT5G44460, AT5G44680, AT5G45070, AT5G45080, AT5G45090, AT5G45110, AT5G45630, AT5G45670, AT5G45680, AT5G45820, AT5G45830, AT5G46110, AT5G46220, AT5G46410, AT5G46600, AT5G46840, AT5G47370, AT5G47960, AT5G48400, AT5G48410, AT5G48545, AT5G48570, AT5G48850, AT5G48880, AT5G49448, AT5G49450, AT5G49560, AT5G49730, AT5G49900, AT5G50450, AT5G50740, AT5G51380, AT5G51460, AT5G51550, AT5G51720, AT5G51910, AT5G52100, AT5G52720, AT5G52730, AT5G52882, AT5G53290, AT5G53360, AT5G54148, AT5G54270, AT5G54280, AT5G54770, AT5G55740, AT5G56010, AT5G56100, AT5G56544, AT5G56550, AT5G57170, AT5G57320, AT5G57560, AT5G57660, AT5G58310, AT5G58620, AT5G59130, AT5G59220, AT5G59480, AT5G59580, AT5G59590, AT5G59780, AT5G60100, AT5G60270, AT5G60310, AT5G60680, AT5G60800, AT5G60890, AT5G61160, AT5G61270, AT5G61350, AT5G61440, AT5G61590, AT5G61600, AT5G61900, AT5G61960, AT5G62140, AT5G62150, AT5G62190, AT5G62430, AT5G62480, AT5G62730, AT5G62920, AT5G63140, AT5G63380, AT5G63450, AT5G63700, AT5G63780, AT5G63820, AT5G64040, AT5G64170, AT5G64530, AT5G64570, AT5G64572, AT5G64700, AT5G64810, AT5G65280, AT5G65380, AT5G66053, AT5G66170, AT5G66520, AT5G66570, AT5G66580, AT5G66630, AT5G66650, AT5G67080, AT5G67160, AT5G67200, AT5G67370, AT5G67420, ATCG00010, ATCG00020, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01060, ATCG01160, ATCG01170, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020
## 43 NA
## 44 NA
## 45 AT1G01010, AT1G01190, AT1G01390, AT1G01640, AT1G01680, AT1G01690, AT1G02520, AT1G02610, AT1G02660, AT1G03010, AT1G03130, AT1G03600, AT1G03630, AT1G03680, AT1G03990, AT1G04250, AT1G04310, AT1G04490, AT1G04600, AT1G04770, AT1G05100, AT1G05675, AT1G05840, AT1G06040, AT1G06460, AT1G06620, AT1G06680, AT1G07050, AT1G07280, AT1G07440, AT1G07500, AT1G07570, AT1G08050, AT1G08380, AT1G09310, AT1G09340, AT1G09350, AT1G09930, AT1G09932, AT1G10020, AT1G10150, AT1G10586, AT1G10657, AT1G10760, AT1G10960, AT1G11400, AT1G12090, AT1G12380, AT1G12540, AT1G12710, AT1G12730, AT1G12845, AT1G12900, AT1G13150, AT1G13245, AT1G13260, AT1G13330, AT1G13340, AT1G13650, AT1G13830, AT1G13930, AT1G14150, AT1G14160, AT1G14200, AT1G14250, AT1G14345, AT1G14700, AT1G14740, AT1G15350, AT1G15810, AT1G15820, AT1G15830, AT1G15980, AT1G15990, AT1G17147, AT1G17380, AT1G17750, AT1G17830, AT1G17970, AT1G18000, AT1G18010, AT1G18020, AT1G18200, AT1G18265, AT1G18330, AT1G18485, AT1G18870, AT1G19150, AT1G19180, AT1G19394, AT1G19540, AT1G19640, AT1G19650, AT1G19680, AT1G20010, AT1G20020, AT1G20310, AT1G20340, AT1G20460, AT1G21130, AT1G21240, AT1G21500, AT1G21550, AT1G21740, AT1G21910, AT1G22180, AT1G22220, AT1G22370, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23060, AT1G23390, AT1G23740, AT1G23850, AT1G24020, AT1G25275, AT1G25400, AT1G25560, AT1G26730, AT1G26770, AT1G26800, AT1G26930, AT1G27330, AT1G27480, AT1G28130, AT1G28370, AT1G29430, AT1G29440, AT1G29460, AT1G29500, AT1G29510, AT1G29640, AT1G29670, AT1G29910, AT1G29920, AT1G30100, AT1G30160, AT1G30380, AT1G30850, AT1G31120, AT1G31330, AT1G31690, AT1G31770, AT1G31900, AT1G32060, AT1G32080, AT1G32220, AT1G32870, AT1G33110, AT1G33170, AT1G33475, AT1G33600, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G35140, AT1G36370, AT1G37130, AT1G43160, AT1G43245, AT1G43310, AT1G43670, AT1G43910, AT1G44130, AT1G44446, AT1G44575, AT1G47510, AT1G47890, AT1G48315, AT1G48320, AT1G48605, AT1G49200, AT1G49520, AT1G49530, AT1G50590, AT1G51080, AT1G51110, AT1G51400, AT1G51402, AT1G51610, AT1G51760, AT1G51780, AT1G51805, AT1G51860, AT1G52030, AT1G52200, AT1G52220, AT1G52230, AT1G52342, AT1G52510, AT1G52565, AT1G52855, AT1G52890, AT1G53163, AT1G53830, AT1G54010, AT1G54030, AT1G54095, AT1G54410, AT1G54780, AT1G54790, AT1G54820, AT1G55330, AT1G55370, AT1G55450, AT1G55610, AT1G55670, AT1G56300, AT1G56340, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G57990, AT1G58030, AT1G59640, AT1G59860, AT1G60190, AT1G60730, AT1G60800, AT1G61110, AT1G61120, AT1G61215, AT1G61260, AT1G61300, AT1G61340, AT1G61520, AT1G61550, AT1G62520, AT1G63840, AT1G64760, AT1G64770, AT1G65230, AT1G65390, AT1G65481, AT1G65690, AT1G65730, AT1G65845, AT1G65890, AT1G66130, AT1G66230, AT1G66280, AT1G66350, AT1G66910, AT1G66930, AT1G66960, AT1G67340, AT1G67420, AT1G67590, AT1G67740, AT1G67820, AT1G67910, AT1G68050, AT1G68110, AT1G68840, AT1G69140, AT1G69260, AT1G69360, AT1G69480, AT1G69530, AT1G69570, AT1G69572, AT1G69830, AT1G69890, AT1G70090, AT1G70420, AT1G70580, AT1G70690, AT1G70790, AT1G70820, AT1G71000, AT1G71030, AT1G71110, AT1G71390, AT1G71970, AT1G72210, AT1G72410, AT1G72416, AT1G72430, AT1G72540, AT1G72600, AT1G72610, AT1G72640, AT1G72645, AT1G72700, AT1G72770, AT1G73130, AT1G73210, AT1G73470, AT1G73480, AT1G73600, AT1G73602, AT1G73750, AT1G73870, AT1G74070, AT1G74100, AT1G74430, AT1G74710, AT1G74730, AT1G74940, AT1G75280, AT1G75450, AT1G75540, AT1G75690, AT1G75900, AT1G76080, AT1G76100, AT1G76600, AT1G76620, AT1G76640, AT1G76690, AT1G76980, AT1G77210, AT1G77280, AT1G77760, AT1G78000, AT1G78290, AT1G78600, AT1G78780, AT1G78830, AT1G78990, AT1G78995, AT1G79270, AT1G79310, AT1G79330, AT1G80110, AT1G80280, AT1G80440, AT1G80590, AT1G80840, AT1G80920, AT2G01008, AT2G01010, AT2G01020, AT2G01590, AT2G01755, AT2G01830, AT2G01870, AT2G01890, AT2G01918, AT2G02070, AT2G02340, AT2G02450, AT2G03310, AT2G03410, AT2G03420, AT2G03550, AT2G03750, AT2G04070, AT2G04430, AT2G04450, AT2G04790, AT2G04795, AT2G05070, AT2G05100, AT2G05160, AT2G05940, AT2G06520, AT2G13360, AT2G14610, AT2G14620, AT2G15090, AT2G15760, AT2G15890, AT2G15970, AT2G16270, AT2G16365, AT2G16650, AT2G16720, AT2G17230, AT2G17500, AT2G17880, AT2G18160, AT2G18162, AT2G18300, AT2G18350, AT2G18560, AT2G18660, AT2G18700, AT2G19310, AT2G20110, AT2G20142, AT2G21130, AT2G21188, AT2G21320, AT2G21330, AT2G21970, AT2G22200, AT2G22330, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G23170, AT2G23290, AT2G23840, AT2G24240, AT2G24550, AT2G24580, AT2G24645, AT2G25200, AT2G25690, AT2G25735, AT2G25900, AT2G26150, AT2G26300, AT2G26390, AT2G26400, AT2G26480, AT2G26560, AT2G26710, AT2G26870, AT2G27228, AT2G27230, AT2G27300, AT2G27385, AT2G27420, AT2G28110, AT2G28120, AT2G28450, AT2G28570, AT2G28605, AT2G28900, AT2G29100, AT2G29170, AT2G29290, AT2G29300, AT2G29310, AT2G29630, AT2G29650, AT2G29750, AT2G30020, AT2G30070, AT2G30150, AT2G30420, AT2G30540, AT2G30570, AT2G30615, AT2G30770, AT2G30820, AT2G30830, AT2G31040, AT2G31180, AT2G31945, AT2G32100, AT2G32130, AT2G32140, AT2G32460, AT2G32500, AT2G32640, AT2G32930, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34410, AT2G34420, AT2G34430, AT2G34620, AT2G35660, AT2G35940, AT2G35945, AT2G35950, AT2G36145, AT2G36390, AT2G36430, AT2G36640, AT2G37070, AT2G37440, AT2G37530, AT2G37540, AT2G37585, AT2G37750, AT2G37950, AT2G38240, AT2G38250, AT2G38400, AT2G38480, AT2G38490, AT2G38500, AT2G38760, AT2G38800, AT2G39300, AT2G39400, AT2G39435, AT2G39730, AT2G39800, AT2G39900, AT2G39980, AT2G40000, AT2G40080, AT2G40100, AT2G40150, AT2G40200, AT2G40330, AT2G40340, AT2G40460, AT2G40550, AT2G40610, AT2G40670, AT2G40840, AT2G40960, AT2G41070, AT2G41430, AT2G42060, AT2G42485, AT2G42530, AT2G42540, AT2G42760, AT2G42890, AT2G43000, AT2G43010, AT2G43120, AT2G43290, AT2G43320, AT2G43570, AT2G43620, AT2G43680, AT2G44130, AT2G44490, AT2G44578, AT2G44600, AT2G44840, AT2G44940, AT2G45180, AT2G45245, AT2G45560, AT2G45760, AT2G45850, AT2G45920, AT2G46040, AT2G46240, AT2G46400, AT2G46410, AT2G46510, AT2G46520, AT2G46660, AT2G46790, AT2G46820, AT2G46830, AT2G46900, AT2G46970, AT2G47000, AT2G47420, AT2G47770, AT2G47820, AT2G47920, AT2G47950, AT3G01060, AT3G01440, AT3G01500, AT3G01770, AT3G01810, AT3G02210, AT3G02550, AT3G02730, AT3G02885, AT3G02990, AT3G03310, AT3G03440, AT3G04000, AT3G04210, AT3G04300, AT3G04380, AT3G04420, AT3G05500, AT3G06020, AT3G06145, AT3G06160, AT3G06490, AT3G06890, AT3G07200, AT3G07310, AT3G07320, AT3G07350, AT3G08000, AT3G08920, AT3G08940, AT3G09162, AT3G09440, AT3G09580, AT3G09600, AT3G10020, AT3G10060, AT3G10520, AT3G10720, AT3G10815, AT3G10940, AT3G11090, AT3G11110, AT3G11210, AT3G11450, AT3G11480, AT3G12860, AT3G12920, AT3G13080, AT3G13100, AT3G13380, AT3G13437, AT3G13470, AT3G13610, AT3G13730, AT3G14200, AT3G14440, AT3G14680, AT3G14700, AT3G14870, AT3G15536, AT3G15570, AT3G15630, AT3G15840, AT3G15950, AT3G16130, AT3G16250, AT3G16310, AT3G16460, AT3G16620, AT3G17120, AT3G17280, AT3G17390, AT3G17420, AT3G17510, AT3G17640, AT3G17690, AT3G17840, AT3G17860, AT3G18050, AT3G18080, AT3G18500, AT3G18710, AT3G18773, AT3G18890, AT3G19000, AT3G19002, AT3G19100, AT3G19615, AT3G19680, AT3G19690, AT3G19970, AT3G20250, AT3G21055, AT3G21080, AT3G21320, AT3G21500, AT3G21670, AT3G21700, AT3G21780, AT3G21950, AT3G22160, AT3G22210, AT3G22275, AT3G22290, AT3G23880, AT3G24430, AT3G24515, AT3G24518, AT3G24520, AT3G25010, AT3G25120, AT3G25510, AT3G25670, AT3G25890, AT3G26180, AT3G26290, AT3G26440, AT3G26470, AT3G26510, AT3G26740, AT3G27170, AT3G27415, AT3G27416, AT3G27690, AT3G27810, AT3G27870, AT3G28510, AT3G28580, AT3G29320, AT3G29330, AT3G43250, AT3G44300, AT3G44717, AT3G45970, AT3G46370, AT3G46630, AT3G46640, AT3G46658, AT3G46660, AT3G46780, AT3G46970, AT3G47070, AT3G47420, AT3G47460, AT3G47470, AT3G47480, AT3G47500, AT3G47730, AT3G48090, AT3G48100, AT3G48115, AT3G48200, AT3G48280, AT3G48420, AT3G48520, AT3G48580, AT3G48700, AT3G48720, AT3G48780, AT3G49580, AT3G49790, AT3G50060, AT3G50770, AT3G50820, AT3G50840, AT3G50920, AT3G50930, AT3G50960, AT3G51080, AT3G51090, AT3G51400, AT3G51470, AT3G51670, AT3G51750, AT3G51860, AT3G52070, AT3G52072, AT3G52180, AT3G52430, AT3G52960, AT3G53210, AT3G53470, AT3G53800, AT3G54320, AT3G54366, AT3G54490, AT3G54500, AT3G54890, AT3G55060, AT3G55240, AT3G55500, AT3G55580, AT3G55630, AT3G55760, AT3G55800, AT3G55970, AT3G56160, AT3G56170, AT3G56260, AT3G56290, AT3G56940, AT3G57260, AT3G57380, AT3G57740, AT3G57950, AT3G59060, AT3G59750, AT3G59870, AT3G59900, AT3G59930, AT3G59940, AT3G60390, AT3G60420, AT3G60470, AT3G60490, AT3G60961, AT3G60966, AT3G61060, AT3G61190, AT3G61198, AT3G61420, AT3G61430, AT3G61450, AT3G61470, AT3G61550, AT3G61760, AT3G61870, AT3G61890, AT3G61930, AT3G62410, AT3G62550, AT3G62950, AT3G63010, AT3G63140, AT3G63160, AT3G63380, AT4G00165, AT4G00700, AT4G00970, AT4G01330, AT4G01430, AT4G01535, AT4G01540, AT4G01670, AT4G02075, AT4G02360, AT4G02380, AT4G02760, AT4G02770, AT4G03400, AT4G03460, AT4G03510, AT4G04020, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04810, AT4G04830, AT4G05010, AT4G05020, AT4G05070, AT4G05100, AT4G05180, AT4G06534, AT4G06744, AT4G08950, AT4G09010, AT4G09650, AT4G09760, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10500, AT4G11350, AT4G11360, AT4G11521, AT4G11990, AT4G12320, AT4G12330, AT4G12390, AT4G12480, AT4G12490, AT4G12500, AT4G12720, AT4G12735, AT4G12800, AT4G12830, AT4G12900, AT4G12980, AT4G13010, AT4G13340, AT4G13810, AT4G14270, AT4G14560, AT4G14630, AT4G14830, AT4G15210, AT4G15233, AT4G15248, AT4G15280, AT4G15417, AT4G15430, AT4G15780, AT4G15975, AT4G16146, AT4G16260, AT4G16350, AT4G16515, AT4G16880, AT4G16980, AT4G17100, AT4G17460, AT4G17660, AT4G17670, AT4G17730, AT4G17810, AT4G18205, AT4G18220, AT4G19170, AT4G19530, AT4G20320, AT4G20820, AT4G20840, AT4G21280, AT4G21445, AT4G21680, AT4G21790, AT4G21870, AT4G21990, AT4G22070, AT4G22560, AT4G22690, AT4G22890, AT4G23150, AT4G23180, AT4G23300, AT4G23310, AT4G23420, AT4G23800, AT4G23810, AT4G24240, AT4G25290, AT4G25390, AT4G25433, AT4G25480, AT4G25810, AT4G25940, AT4G26080, AT4G26120, AT4G26470, AT4G26520, AT4G26530, AT4G27030, AT4G27310, AT4G27440, AT4G27590, AT4G27700, AT4G27860, AT4G27870, AT4G28240, AT4G28270, AT4G28703, AT4G28750, AT4G29190, AT4G29380, AT4G29740, AT4G29930, AT4G30180, AT4G30650, AT4G30662, AT4G32280, AT4G32340, AT4G32590, AT4G32920, AT4G32980, AT4G33010, AT4G33150, AT4G33490, AT4G33625, AT4G33660, AT4G33980, AT4G34200, AT4G34220, AT4G34250, AT4G34630, AT4G34650, AT4G34900, AT4G35600, AT4G35655, AT4G35720, AT4G36010, AT4G36040, AT4G36430, AT4G36530, AT4G36640, AT4G36780, AT4G36950, AT4G37110, AT4G37260, AT4G37390, AT4G37610, AT4G37850, AT4G37900, AT4G37925, AT4G38550, AT4G38552, AT4G38560, AT4G38770, AT4G39030, AT4G39190, AT4G39260, AT4G39580, AT4G39710, AT4G39730, AT4G39950, AT5G01015, AT5G01520, AT5G01530, AT5G01840, AT5G01850, AT5G02100, AT5G02160, AT5G02170, AT5G02180, AT5G02760, AT5G02810, AT5G03210, AT5G03285, AT5G03435, AT5G03668, AT5G03670, AT5G03680, AT5G04860, AT5G04950, AT5G05090, AT5G05330, AT5G05440, AT5G05580, AT5G05680, AT5G05890, AT5G06110, AT5G06220, AT5G06230, AT5G06290, AT5G06610, AT5G06690, AT5G06980, AT5G07580, AT5G07650, AT5G08150, AT5G08410, AT5G08620, AT5G09660, AT5G10250, AT5G10340, AT5G10380, AT5G10690, AT5G11070, AT5G11210, AT5G11242, AT5G11390, AT5G11870, AT5G12110, AT5G12950, AT5G13210, AT5G13220, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14090, AT5G14390, AT5G14760, AT5G15190, AT5G16170, AT5G16350, AT5G16360, AT5G16370, AT5G16400, AT5G16810, AT5G17330, AT5G17490, AT5G17760, AT5G18030, AT5G18080, AT5G18660, AT5G19110, AT5G19120, AT5G19190, AT5G19940, AT5G20250, AT5G20700, AT5G20960, AT5G21280, AT5G21430, AT5G21940, AT5G21950, AT5G22540, AT5G22630, AT5G22920, AT5G23160, AT5G23210, AT5G23235, AT5G23240, AT5G23360, AT5G23380, AT5G23590, AT5G24090, AT5G24120, AT5G24155, AT5G24200, AT5G24240, AT5G24280, AT5G24290, AT5G24300, AT5G24460, AT5G24470, AT5G24660, AT5G24890, AT5G24910, AT5G25130, AT5G25280, AT5G26170, AT5G26220, AT5G26230, AT5G26270, AT5G26920, AT5G27290, AT5G28910, AT5G28919, AT5G28920, AT5G33355, AT5G35970, AT5G38130, AT5G38250, AT5G38350, AT5G38410, AT5G38510, AT5G38980, AT5G38990, AT5G39020, AT5G39210, AT5G39530, AT5G39610, AT5G39860, AT5G40210, AT5G40500, AT5G41050, AT5G41180, AT5G41315, AT5G41610, AT5G41612, AT5G41730, AT5G41761, AT5G42050, AT5G42200, AT5G43170, AT5G43440, AT5G43750, AT5G44005, AT5G44060, AT5G44070, AT5G44260, AT5G44350, AT5G44380, AT5G44390, AT5G44410, AT5G44460, AT5G44680, AT5G44990, AT5G45070, AT5G45080, AT5G45090, AT5G45110, AT5G45630, AT5G45670, AT5G45680, AT5G45820, AT5G45830, AT5G46110, AT5G46220, AT5G46410, AT5G46600, AT5G46840, AT5G47370, AT5G47960, AT5G48400, AT5G48410, AT5G48545, AT5G48570, AT5G48850, AT5G48880, AT5G49100, AT5G49280, AT5G49448, AT5G49450, AT5G49560, AT5G49730, AT5G49900, AT5G50450, AT5G50740, AT5G51380, AT5G51460, AT5G51550, AT5G51720, AT5G51910, AT5G52100, AT5G52720, AT5G52730, AT5G52882, AT5G53290, AT5G53360, AT5G54145, AT5G54148, AT5G54270, AT5G54280, AT5G54700, AT5G54770, AT5G55740, AT5G56010, AT5G56050, AT5G56100, AT5G56544, AT5G56550, AT5G56880, AT5G57170, AT5G57320, AT5G57560, AT5G57660, AT5G58310, AT5G58570, AT5G58620, AT5G59130, AT5G59220, AT5G59480, AT5G59580, AT5G59590, AT5G59780, AT5G60100, AT5G60270, AT5G60310, AT5G60400, AT5G60680, AT5G60800, AT5G60890, AT5G61160, AT5G61270, AT5G61350, AT5G61440, AT5G61590, AT5G61600, AT5G61900, AT5G61960, AT5G62140, AT5G62150, AT5G62190, AT5G62430, AT5G62480, AT5G62720, AT5G62730, AT5G62920, AT5G63140, AT5G63225, AT5G63380, AT5G63450, AT5G63700, AT5G63780, AT5G63820, AT5G64040, AT5G64170, AT5G64190, AT5G64530, AT5G64570, AT5G64572, AT5G64700, AT5G64810, AT5G65280, AT5G65380, AT5G66052, AT5G66053, AT5G66170, AT5G66520, AT5G66570, AT5G66630, AT5G66650, AT5G67080, AT5G67160, AT5G67200, AT5G67370, AT5G67420, ATCG00010, ATCG00020, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01060, ATCG01160, ATCG01170, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00030
## 46 NA
## 47 NA
## 48 AT1G01340, AT1G01560, AT1G01680, AT1G02220, AT1G02270, AT1G02390, AT1G02450, AT1G02920, AT1G03020, AT1G03050, AT1G03055, AT1G03495, AT1G03850, AT1G04240, AT1G05010, AT1G05020, AT1G05630, AT1G05675, AT1G05880, AT1G06360, AT1G08050, AT1G08860, AT1G09950, AT1G10230, AT1G11310, AT1G11330, AT1G11905, AT1G12210, AT1G12240, AT1G12540, AT1G13110, AT1G13310, AT1G13550, AT1G14200, AT1G14870, AT1G15405, AT1G15520, AT1G16370, AT1G16400, AT1G16410, AT1G17147, AT1G17615, AT1G18020, AT1G18390, AT1G19020, AT1G19250, AT1G19650, AT1G19670, AT1G21250, AT1G21520, AT1G21525, AT1G21740, AT1G22400, AT1G22770, AT1G23200, AT1G25370, AT1G25450, AT1G26730, AT1G26770, AT1G26920, AT1G27100, AT1G28010, AT1G29280, AT1G30040, AT1G30190, AT1G30270, AT1G30420, AT1G31280, AT1G31290, AT1G31690, AT1G31770, AT1G32920, AT1G32940, AT1G32960, AT1G33800, AT1G34210, AT1G35210, AT1G35230, AT1G43310, AT1G43910, AT1G44900, AT1G49520, AT1G49530, AT1G51660, AT1G51780, AT1G52200, AT1G53620, AT1G53625, AT1G54095, AT1G55450, AT1G56060, AT1G56240, AT1G56242, AT1G56520, AT1G57990, AT1G61140, AT1G61370, AT1G63040, AT1G63570, AT1G63750, AT1G63820, AT1G64710, AT1G65590, AT1G66280, AT1G66550, AT1G66600, AT1G67635, AT1G67800, AT1G67810, AT1G67920, AT1G68200, AT1G68390, AT1G69370, AT1G69480, AT1G70420, AT1G70690, AT1G71100, AT1G72140, AT1G72180, AT1G72450, AT1G72930, AT1G73210, AT1G73805, AT1G74430, AT1G74710, AT1G74950, AT1G75540, AT1G76970, AT1G77500, AT1G78380, AT1G79680, AT2G01830, AT2G02930, AT2G02990, AT2G03980, AT2G04040, AT2G04070, AT2G04430, AT2G04450, AT2G05070, AT2G06255, AT2G07687, AT2G07690, AT2G13810, AT2G15042, AT2G15480, AT2G16440, AT2G18660, AT2G20110, AT2G21510, AT2G21790, AT2G22200, AT2G22770, AT2G22930, AT2G23760, AT2G23810, AT2G24160, AT2G24240, AT2G24285, AT2G24490, AT2G25130, AT2G25737, AT2G26150, AT2G26240, AT2G26440, AT2G26560, AT2G27228, AT2G27230, AT2G28210, AT2G28570, AT2G28890, AT2G29720, AT2G30540, AT2G30820, AT2G30830, AT2G31018, AT2G31020, AT2G31270, AT2G32200, AT2G32210, AT2G34010, AT2G34070, AT2G34500, AT2G35950, AT2G36350, AT2G36380, AT2G36470, AT2G36830, AT2G37180, AT2G37560, AT2G37940, AT2G37980, AT2G38400, AT2G38750, AT2G38760, AT2G38790, AT2G39110, AT2G39250, AT2G39800, AT2G40340, AT2G40460, AT2G40550, AT2G41380, AT2G41835, AT2G42950, AT2G45760, AT2G46330, AT2G46430, AT2G46440, AT2G47130, AT2G47140, AT2G47600, AT2G47730, AT2G47950, AT3G01180, AT3G01290, AT3G02840, AT3G02990, AT3G04210, AT3G04640, AT3G05360, AT3G06020, AT3G07195, AT3G07720, AT3G09010, AT3G09440, AT3G11010, AT3G11340, AT3G11470, AT3G11480, AT3G11840, AT3G13080, AT3G13100, AT3G13610, AT3G13910, AT3G14620, AT3G14870, AT3G15356, AT3G15720, AT3G16460, AT3G16510, AT3G17510, AT3G17860, AT3G19010, AT3G19100, AT3G19260, AT3G21320, AT3G21560, AT3G21670, AT3G21780, AT3G22370, AT3G22910, AT3G23530, AT3G23910, AT3G25610, AT3G25882, AT3G26210, AT3G26470, AT3G26600, AT3G26830, AT3G27170, AT3G27960, AT3G28580, AT3G28930, AT3G29400, AT3G41768, AT3G43270, AT3G44350, AT3G44830, AT3G45260, AT3G46520, AT3G46940, AT3G47540, AT3G47750, AT3G47820, AT3G48090, AT3G48350, AT3G48520, AT3G48640, AT3G48850, AT3G49110, AT3G49540, AT3G50470, AT3G50480, AT3G52430, AT3G54150, AT3G54820, AT3G55290, AT3G55470, AT3G55500, AT3G55970, AT3G56260, AT3G56710, AT3G56870, AT3G56891, AT3G57700, AT3G57780, AT3G59710, AT3G60190, AT3G60420, AT3G60450, AT3G60966, AT3G61420, AT3G61430, AT3G61490, AT3G61760, AT3G61890, AT3G62700, AT4G00955, AT4G01360, AT4G01870, AT4G01895, AT4G01950, AT4G02380, AT4G02420, AT4G02550, AT4G03060, AT4G03400, AT4G05030, AT4G09570, AT4G10060, AT4G10390, AT4G11000, AT4G11280, AT4G11300, AT4G11840, AT4G12030, AT4G13180, AT4G14220, AT4G14368, AT4G14610, AT4G15070, AT4G15430, AT4G16740, AT4G16820, AT4G16880, AT4G18250, AT4G18880, AT4G19660, AT4G21380, AT4G21840, AT4G21903, AT4G22200, AT4G22520, AT4G22530, AT4G22980, AT4G23010, AT4G23170, AT4G23180, AT4G23250, AT4G23420, AT4G23570, AT4G24160, AT4G25110, AT4G25433, AT4G25900, AT4G27745, AT4G27870, AT4G28390, AT4G30280, AT4G30640, AT4G32780, AT4G33925, AT4G33930, AT4G34135, AT4G34390, AT4G35180, AT4G36010, AT4G36550, AT4G36700, AT4G37030, AT4G37370, AT4G37390, AT4G37850, AT4G38550, AT4G38552, AT4G39030, AT5G01040, AT5G01050, AT5G01640, AT5G01840, AT5G01980, AT5G02260, AT5G02490, AT5G02810, AT5G04930, AT5G06990, AT5G07650, AT5G07690, AT5G08335, AT5G08790, AT5G10390, AT5G10440, AT5G11160, AT5G12940, AT5G13190, AT5G13220, AT5G14700, AT5G14760, AT5G15190, AT5G17380, AT5G17490, AT5G17780, AT5G18470, AT5G19110, AT5G20400, AT5G20960, AT5G21280, AT5G22060, AT5G22300, AT5G22530, AT5G22630, AT5G23160, AT5G24205, AT5G24206, AT5G24240, AT5G24280, AT5G24290, AT5G24910, AT5G25250, AT5G25930, AT5G26260, AT5G26270, AT5G27350, AT5G27760, AT5G38210, AT5G38212, AT5G38990, AT5G39020, AT5G39040, AT5G39680, AT5G41120, AT5G41180, AT5G41730, AT5G41880, AT5G42380, AT5G42440, AT5G42650, AT5G43910, AT5G44070, AT5G44350, AT5G44635, AT5G45510, AT5G46230, AT5G47730, AT5G51630, AT5G51830, AT5G52020, AT5G52120, AT5G52570, AT5G52640, AT5G52720, AT5G52810, AT5G52882, AT5G52910, AT5G53290, AT5G54470, AT5G54490, AT5G54610, AT5G54700, AT5G54720, AT5G54860, AT5G55450, AT5G56960, AT5G57340, AT5G57800, AT5G59720, AT5G60280, AT5G60890, AT5G60900, AT5G61890, AT5G61900, AT5G61910, AT5G62180, AT5G62470, AT5G62770, AT5G62920, AT5G63450, AT5G64170, AT5G64750, AT5G64810, AT5G64870, AT5G65280, AT5G66052, AT5G66890, AT5G67150, AT5G67160, AT5G67340, ATCG00020, ATCG00120, ATCG00130, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00570, ATCG00580, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00890, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG01010, ATCG01060, ATCG01080, ATCG01090, ATCG01100, ATCG01110, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00060, ATMG00280
## 49 NA
## 50 NA
## 51 AT1G01340, AT1G01560, AT1G01680, AT1G02220, AT1G02270, AT1G02390, AT1G02450, AT1G02920, AT1G03020, AT1G03050, AT1G03055, AT1G03495, AT1G03850, AT1G04240, AT1G05010, AT1G05020, AT1G05630, AT1G05675, AT1G05880, AT1G06360, AT1G08050, AT1G08860, AT1G09950, AT1G10230, AT1G11310, AT1G11330, AT1G11905, AT1G12210, AT1G12240, AT1G12540, AT1G13110, AT1G14200, AT1G14870, AT1G15405, AT1G15520, AT1G16370, AT1G16400, AT1G16410, AT1G17615, AT1G18020, AT1G18390, AT1G19020, AT1G19250, AT1G19650, AT1G19670, AT1G21250, AT1G21520, AT1G21525, AT1G21740, AT1G22400, AT1G22770, AT1G23200, AT1G25450, AT1G26730, AT1G26770, AT1G27100, AT1G28010, AT1G29280, AT1G30040, AT1G30270, AT1G30420, AT1G31280, AT1G31290, AT1G31690, AT1G31770, AT1G32920, AT1G32940, AT1G32960, AT1G33800, AT1G34210, AT1G35210, AT1G35230, AT1G43310, AT1G43910, AT1G44900, AT1G49520, AT1G49530, AT1G51660, AT1G51780, AT1G52200, AT1G53620, AT1G55450, AT1G56240, AT1G56242, AT1G56520, AT1G57990, AT1G61140, AT1G61370, AT1G63040, AT1G63570, AT1G63750, AT1G63820, AT1G64710, AT1G65590, AT1G66280, AT1G66550, AT1G66600, AT1G67635, AT1G67800, AT1G67810, AT1G68200, AT1G68390, AT1G69370, AT1G69480, AT1G70420, AT1G70690, AT1G71100, AT1G72140, AT1G72180, AT1G72450, AT1G72930, AT1G73805, AT1G74430, AT1G74710, AT1G74950, AT1G75540, AT1G75830, AT1G76970, AT1G77500, AT1G78380, AT1G79680, AT2G01830, AT2G02930, AT2G02990, AT2G03980, AT2G04040, AT2G04070, AT2G04430, AT2G04450, AT2G05070, AT2G06255, AT2G07687, AT2G07690, AT2G13810, AT2G15042, AT2G15480, AT2G16440, AT2G18660, AT2G20110, AT2G21510, AT2G21790, AT2G22200, AT2G22770, AT2G22930, AT2G23760, AT2G23810, AT2G24160, AT2G24240, AT2G24490, AT2G25130, AT2G25737, AT2G26150, AT2G26440, AT2G26560, AT2G27228, AT2G27230, AT2G28210, AT2G28890, AT2G29720, AT2G30540, AT2G30830, AT2G31018, AT2G31020, AT2G31270, AT2G34010, AT2G34070, AT2G34500, AT2G35950, AT2G36350, AT2G36380, AT2G36830, AT2G37180, AT2G37560, AT2G37940, AT2G37980, AT2G38400, AT2G38750, AT2G38760, AT2G39110, AT2G39250, AT2G39800, AT2G40340, AT2G40460, AT2G40550, AT2G41380, AT2G42950, AT2G45760, AT2G46430, AT2G46440, AT2G47130, AT2G47140, AT2G47600, AT2G47730, AT3G01180, AT3G01290, AT3G02840, AT3G02990, AT3G04210, AT3G05360, AT3G06020, AT3G07195, AT3G07720, AT3G09010, AT3G09440, AT3G11010, AT3G11340, AT3G11470, AT3G11480, AT3G11840, AT3G13080, AT3G13100, AT3G13610, AT3G14620, AT3G14870, AT3G15356, AT3G15720, AT3G16460, AT3G16510, AT3G17510, AT3G17860, AT3G19010, AT3G19100, AT3G19260, AT3G21560, AT3G21670, AT3G21780, AT3G22370, AT3G22910, AT3G23530, AT3G23910, AT3G25610, AT3G25882, AT3G26210, AT3G26830, AT3G27170, AT3G27960, AT3G28580, AT3G28930, AT3G29400, AT3G41768, AT3G43270, AT3G44350, AT3G44830, AT3G45260, AT3G46520, AT3G46940, AT3G47540, AT3G47750, AT3G47820, AT3G48090, AT3G48350, AT3G48520, AT3G48850, AT3G49110, AT3G49540, AT3G50470, AT3G50480, AT3G52430, AT3G54150, AT3G54820, AT3G55290, AT3G55500, AT3G55970, AT3G56710, AT3G56891, AT3G57700, AT3G57780, AT3G59710, AT3G60190, AT3G60420, AT3G61420, AT3G61430, AT3G61490, AT3G61760, AT3G61890, AT3G62700, AT4G01360, AT4G01870, AT4G01895, AT4G01950, AT4G02380, AT4G02420, AT4G02550, AT4G03060, AT4G03400, AT4G05030, AT4G09570, AT4G10060, AT4G10390, AT4G11280, AT4G11840, AT4G12030, AT4G13180, AT4G14220, AT4G14368, AT4G14610, AT4G15070, AT4G15430, AT4G16740, AT4G16820, AT4G18250, AT4G18880, AT4G19660, AT4G21380, AT4G21840, AT4G21903, AT4G22200, AT4G22520, AT4G22530, AT4G23010, AT4G23170, AT4G23180, AT4G23250, AT4G23420, AT4G23570, AT4G24160, AT4G25110, AT4G25433, AT4G25900, AT4G27870, AT4G28390, AT4G29440, AT4G30280, AT4G30640, AT4G32780, AT4G33925, AT4G33930, AT4G34135, AT4G34390, AT4G35180, AT4G36010, AT4G36550, AT4G37370, AT4G37390, AT4G37850, AT4G38550, AT4G38552, AT4G39030, AT5G01040, AT5G01050, AT5G01640, AT5G01840, AT5G01980, AT5G02260, AT5G02490, AT5G02810, AT5G04930, AT5G06990, AT5G07650, AT5G07690, AT5G08335, AT5G08790, AT5G10390, AT5G10440, AT5G11160, AT5G12940, AT5G13190, AT5G13220, AT5G14090, AT5G14700, AT5G14760, AT5G17380, AT5G17490, AT5G17780, AT5G18470, AT5G19110, AT5G20400, AT5G20960, AT5G21280, AT5G22060, AT5G22300, AT5G22630, AT5G24205, AT5G24206, AT5G24240, AT5G24280, AT5G24290, AT5G24910, AT5G25250, AT5G25930, AT5G26260, AT5G27350, AT5G27760, AT5G38210, AT5G38212, AT5G38990, AT5G39020, AT5G39040, AT5G39680, AT5G41120, AT5G41180, AT5G41730, AT5G41880, AT5G42380, AT5G42440, AT5G42650, AT5G43910, AT5G44070, AT5G44635, AT5G45510, AT5G47730, AT5G51630, AT5G51830, AT5G52020, AT5G52120, AT5G52570, AT5G52640, AT5G52720, AT5G52810, AT5G52882, AT5G52910, AT5G53290, AT5G54470, AT5G54490, AT5G54610, AT5G54720, AT5G54860, AT5G55450, AT5G56960, AT5G57800, AT5G59720, AT5G60280, AT5G60890, AT5G60900, AT5G61890, AT5G61900, AT5G61910, AT5G62180, AT5G62470, AT5G62770, AT5G62920, AT5G63450, AT5G64170, AT5G64750, AT5G64810, AT5G65280, AT5G66890, AT5G67150, AT5G67160, AT5G67340, ATCG00020, ATCG00120, ATCG00130, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00570, ATCG00580, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00890, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG01010, ATCG01060, ATCG01080, ATCG01090, ATCG01100, ATCG01110, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00060, ATMG00280
## 52 NA
## 53 NA
## 54 AT1G01340, AT1G01560, AT1G01680, AT1G02220, AT1G02270, AT1G02390, AT1G02450, AT1G02920, AT1G03020, AT1G03050, AT1G03055, AT1G03495, AT1G03850, AT1G04240, AT1G04490, AT1G05010, AT1G05020, AT1G05630, AT1G05675, AT1G05880, AT1G06148, AT1G06360, AT1G08050, AT1G08860, AT1G09950, AT1G10230, AT1G11310, AT1G11330, AT1G11905, AT1G12210, AT1G12240, AT1G12540, AT1G13110, AT1G13550, AT1G14200, AT1G14870, AT1G15405, AT1G15520, AT1G16370, AT1G16400, AT1G16410, AT1G17147, AT1G17615, AT1G18020, AT1G18390, AT1G19250, AT1G19650, AT1G19670, AT1G21250, AT1G21520, AT1G21525, AT1G21740, AT1G22400, AT1G22770, AT1G23200, AT1G25370, AT1G25450, AT1G26730, AT1G26770, AT1G26920, AT1G27100, AT1G28010, AT1G29280, AT1G30040, AT1G30190, AT1G30270, AT1G30420, AT1G31280, AT1G31290, AT1G31690, AT1G31770, AT1G32920, AT1G32940, AT1G32960, AT1G33800, AT1G34210, AT1G35210, AT1G35230, AT1G43310, AT1G43910, AT1G44900, AT1G49520, AT1G49530, AT1G51660, AT1G51780, AT1G52200, AT1G53620, AT1G54095, AT1G55450, AT1G56240, AT1G56242, AT1G56520, AT1G57990, AT1G59865, AT1G61140, AT1G61370, AT1G63040, AT1G63570, AT1G63750, AT1G63820, AT1G64710, AT1G65590, AT1G66280, AT1G66550, AT1G66600, AT1G67800, AT1G67810, AT1G67920, AT1G68200, AT1G68390, AT1G69370, AT1G69480, AT1G70420, AT1G70690, AT1G71100, AT1G72140, AT1G72180, AT1G72450, AT1G72930, AT1G73210, AT1G73805, AT1G74430, AT1G74710, AT1G74950, AT1G75540, AT1G75830, AT1G76970, AT1G77500, AT1G78380, AT1G79680, AT2G01830, AT2G02930, AT2G02990, AT2G03980, AT2G04040, AT2G04070, AT2G04430, AT2G04450, AT2G05070, AT2G07687, AT2G07690, AT2G13810, AT2G15042, AT2G15480, AT2G16440, AT2G18660, AT2G20110, AT2G21510, AT2G21790, AT2G22200, AT2G22770, AT2G22930, AT2G23760, AT2G23810, AT2G24160, AT2G24240, AT2G24285, AT2G24490, AT2G25130, AT2G25737, AT2G26150, AT2G26240, AT2G26440, AT2G26560, AT2G27228, AT2G27230, AT2G28210, AT2G28570, AT2G28890, AT2G29720, AT2G30540, AT2G30820, AT2G30830, AT2G31018, AT2G31020, AT2G31270, AT2G32200, AT2G32210, AT2G34010, AT2G34070, AT2G34500, AT2G35950, AT2G36350, AT2G36380, AT2G36470, AT2G36815, AT2G36830, AT2G37180, AT2G37560, AT2G37940, AT2G37980, AT2G38400, AT2G38750, AT2G38760, AT2G39110, AT2G39250, AT2G39800, AT2G40340, AT2G40460, AT2G40550, AT2G41380, AT2G41835, AT2G42760, AT2G42950, AT2G45760, AT2G46330, AT2G46430, AT2G46440, AT2G47130, AT2G47140, AT2G47600, AT2G47730, AT2G47950, AT3G01180, AT3G01290, AT3G02840, AT3G02990, AT3G04210, AT3G04640, AT3G05360, AT3G06020, AT3G07195, AT3G07720, AT3G09010, AT3G09440, AT3G11010, AT3G11340, AT3G11470, AT3G11480, AT3G11840, AT3G13080, AT3G13100, AT3G13610, AT3G13910, AT3G14620, AT3G14870, AT3G15356, AT3G15720, AT3G16460, AT3G16510, AT3G17510, AT3G17860, AT3G19010, AT3G19100, AT3G19260, AT3G21320, AT3G21560, AT3G21670, AT3G21780, AT3G22370, AT3G22910, AT3G23530, AT3G23910, AT3G25610, AT3G25882, AT3G26210, AT3G26470, AT3G26600, AT3G26830, AT3G27170, AT3G27960, AT3G28580, AT3G28930, AT3G29240, AT3G29400, AT3G41768, AT3G43270, AT3G44350, AT3G44830, AT3G45260, AT3G46520, AT3G46940, AT3G47540, AT3G47750, AT3G47820, AT3G48090, AT3G48350, AT3G48520, AT3G48640, AT3G48850, AT3G49110, AT3G49540, AT3G50470, AT3G50480, AT3G52430, AT3G54150, AT3G54820, AT3G55290, AT3G55470, AT3G55500, AT3G55970, AT3G56260, AT3G56710, AT3G56870, AT3G56891, AT3G57700, AT3G57780, AT3G59710, AT3G60190, AT3G60420, AT3G60450, AT3G60966, AT3G61420, AT3G61430, AT3G61490, AT3G61760, AT3G61890, AT3G62700, AT4G00955, AT4G01360, AT4G01870, AT4G01895, AT4G01950, AT4G02380, AT4G02420, AT4G02550, AT4G03060, AT4G03400, AT4G05030, AT4G09300, AT4G09570, AT4G10060, AT4G10390, AT4G11000, AT4G11280, AT4G11840, AT4G12030, AT4G13180, AT4G14220, AT4G14368, AT4G14610, AT4G15070, AT4G15430, AT4G16740, AT4G16820, AT4G16880, AT4G18250, AT4G18880, AT4G19660, AT4G21380, AT4G21840, AT4G21903, AT4G22200, AT4G22520, AT4G22530, AT4G22980, AT4G23010, AT4G23170, AT4G23180, AT4G23250, AT4G23420, AT4G23570, AT4G24160, AT4G25110, AT4G25433, AT4G25780, AT4G25900, AT4G27745, AT4G27870, AT4G28390, AT4G29440, AT4G30280, AT4G30640, AT4G33925, AT4G33930, AT4G34135, AT4G34390, AT4G35180, AT4G36010, AT4G36550, AT4G36700, AT4G37030, AT4G37370, AT4G37390, AT4G37850, AT4G38550, AT4G38552, AT4G39030, AT5G01040, AT5G01050, AT5G01640, AT5G01840, AT5G01980, AT5G02260, AT5G02490, AT5G02810, AT5G04930, AT5G06990, AT5G07650, AT5G07690, AT5G08335, AT5G08790, AT5G10390, AT5G10440, AT5G11160, AT5G12930, AT5G12940, AT5G13190, AT5G13220, AT5G14090, AT5G14760, AT5G15190, AT5G17380, AT5G17490, AT5G17780, AT5G18470, AT5G19110, AT5G20400, AT5G20960, AT5G21280, AT5G22060, AT5G22300, AT5G22630, AT5G23160, AT5G24205, AT5G24206, AT5G24240, AT5G24280, AT5G24290, AT5G24910, AT5G25250, AT5G25930, AT5G26260, AT5G26270, AT5G27350, AT5G27760, AT5G38210, AT5G38212, AT5G38990, AT5G39020, AT5G39040, AT5G39680, AT5G41120, AT5G41180, AT5G41730, AT5G41880, AT5G42380, AT5G42440, AT5G42650, AT5G43910, AT5G44070, AT5G44350, AT5G44635, AT5G45510, AT5G46230, AT5G47730, AT5G51630, AT5G51830, AT5G52020, AT5G52120, AT5G52570, AT5G52640, AT5G52720, AT5G52810, AT5G52882, AT5G52910, AT5G53290, AT5G54300, AT5G54470, AT5G54490, AT5G54610, AT5G54700, AT5G54720, AT5G54860, AT5G55450, AT5G56960, AT5G57340, AT5G57800, AT5G59720, AT5G60280, AT5G60890, AT5G60900, AT5G61890, AT5G61900, AT5G61910, AT5G62180, AT5G62470, AT5G62770, AT5G62920, AT5G63450, AT5G64170, AT5G64750, AT5G64810, AT5G64870, AT5G65280, AT5G66052, AT5G66640, AT5G66890, AT5G67150, AT5G67160, AT5G67340, ATCG00020, ATCG00120, ATCG00130, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00570, ATCG00580, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00890, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG01010, ATCG01060, ATCG01080, ATCG01090, ATCG01100, ATCG01110, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00060, ATMG00280
## 55 NA
## 56 NA
## 57 AT1G01010, AT1G01070, AT1G01120, AT1G01190, AT1G01200, AT1G01300, AT1G01340, AT1G01370, AT1G01430, AT1G01480, AT1G01520, AT1G01560, AT1G01590, AT1G01610, AT1G01620, AT1G01680, AT1G01690, AT1G02220, AT1G02230, AT1G02310, AT1G02390, AT1G02450, AT1G02470, AT1G02520, AT1G02640, AT1G02650, AT1G02660, AT1G02700, AT1G02710, AT1G02750, AT1G03050, AT1G03180, AT1G03210, AT1G03290, AT1G03300, AT1G03340, AT1G03400, AT1G03495, AT1G03600, AT1G03630, AT1G03660, AT1G03680, AT1G03850, AT1G03870, AT1G03990, AT1G04040, AT1G04160, AT1G04310, AT1G04360, AT1G04420, AT1G04500, AT1G04570, AT1G04600, AT1G04780, AT1G05000, AT1G05100, AT1G05170, AT1G05310, AT1G05340, AT1G05420, AT1G05570, AT1G05680, AT1G05835, AT1G05880, AT1G06160, AT1G06180, AT1G06240, AT1G06250, AT1G06260, AT1G06265, AT1G06460, AT1G06620, AT1G06660, AT1G06680, AT1G06850, AT1G07000, AT1G07020, AT1G07110, AT1G07320, AT1G07430, AT1G07440, AT1G07476, AT1G07490, AT1G07500, AT1G07590, AT1G07600, AT1G07610, AT1G07620, AT1G07630, AT1G07880, AT1G08050, AT1G08090, AT1G08300, AT1G08630, AT1G08810, AT1G08860, AT1G08920, AT1G08940, AT1G09090, AT1G09240, AT1G09340, AT1G09350, AT1G09440, AT1G09500, AT1G09560, AT1G09630, AT1G09750, AT1G09930, AT1G09932, AT1G10070, AT1G10140, AT1G10340, AT1G10380, AT1G10410, AT1G10520, AT1G10585, AT1G10690, AT1G10710, AT1G10910, AT1G10960, AT1G11000, AT1G11100, AT1G11130, AT1G11330, AT1G11362, AT1G11400, AT1G11480, AT1G11545, AT1G11670, AT1G11720, AT1G11860, AT1G11905, AT1G11925, AT1G12060, AT1G12090, AT1G12500, AT1G12540, AT1G12730, AT1G12860, AT1G12900, AT1G13150, AT1G13250, AT1G13310, AT1G13330, AT1G13340, AT1G13380, AT1G13420, AT1G13470, AT1G13520, AT1G13550, AT1G13650, AT1G13790, AT1G13990, AT1G14030, AT1G14150, AT1G14160, AT1G14180, AT1G14185, AT1G14260, AT1G14270, AT1G14330, AT1G14345, AT1G14440, AT1G14540, AT1G14687, AT1G14700, AT1G14720, AT1G14870, AT1G14880, AT1G14900, AT1G15000, AT1G15010, AT1G15040, AT1G15080, AT1G15125, AT1G15160, AT1G15180, AT1G15260, AT1G15290, AT1G15380, AT1G15405, AT1G15415, AT1G15510, AT1G15520, AT1G15550, AT1G15670, AT1G15690, AT1G15790, AT1G15820, AT1G15980, AT1G15990, AT1G16080, AT1G16150, AT1G16300, AT1G16410, AT1G16420, AT1G16500, AT1G16670, AT1G16720, AT1G17020, AT1G17100, AT1G17200, AT1G17380, AT1G17490, AT1G17500, AT1G17600, AT1G17615, AT1G17650, AT1G17745, AT1G17750, AT1G17850, AT1G18250, AT1G18415, AT1G18420, AT1G18570, AT1G18620, AT1G18650, AT1G18735, AT1G18890, AT1G19020, AT1G19150, AT1G19160, AT1G19180, AT1G19220, AT1G19230, AT1G19250, AT1G19270, AT1G19350, AT1G19450, AT1G19490, AT1G19640, AT1G20010, AT1G20020, AT1G20190, AT1G20310, AT1G20340, AT1G20740, AT1G20780, AT1G20823, AT1G21000, AT1G21100, AT1G21200, AT1G21210, AT1G21240, AT1G21250, AT1G21370, AT1G21400, AT1G21500, AT1G21520, AT1G21525, AT1G21680, AT1G21740, AT1G21880, AT1G21910, AT1G21930, AT1G22220, AT1G22280, AT1G22330, AT1G22370, AT1G22400, AT1G22403, AT1G22410, AT1G22470, AT1G22480, AT1G22510, AT1G22550, AT1G22590, AT1G22840, AT1G22850, AT1G22985, AT1G23040, AT1G23052, AT1G23080, AT1G23120, AT1G23200, AT1G23205, AT1G23470, AT1G23480, AT1G23530, AT1G23550, AT1G23560, AT1G23740, AT1G23840, AT1G23850, AT1G23940, AT1G24140, AT1G24145, AT1G24150, AT1G24577, AT1G25240, AT1G25400, AT1G25450, AT1G26130, AT1G26150, AT1G26200, AT1G26230, AT1G26250, AT1G26290, AT1G26330, AT1G26380, AT1G26390, AT1G26410, AT1G26690, AT1G26810, AT1G26930, AT1G27020, AT1G27110, AT1G27210, AT1G27300, AT1G27420, AT1G27460, AT1G27480, AT1G27980, AT1G28330, AT1G28360, AT1G28370, AT1G28480, AT1G29090, AT1G29195, AT1G29240, AT1G29290, AT1G29600, AT1G29640, AT1G29660, AT1G29670, AT1G29680, AT1G29790, AT1G29910, AT1G29920, AT1G29930, AT1G29980, AT1G30020, AT1G30040, AT1G30135, AT1G30220, AT1G30270, AT1G30280, AT1G30360, AT1G30380, AT1G30473, AT1G30520, AT1G30620, AT1G30700, AT1G30755, AT1G30760, AT1G30840, AT1G30850, AT1G30900, AT1G30935, AT1G31010, AT1G31173, AT1G31290, AT1G31330, AT1G31540, AT1G31550, AT1G31710, AT1G31900, AT1G31950, AT1G32060, AT1G32080, AT1G32200, AT1G32210, AT1G32220, AT1G32350, AT1G32470, AT1G32540, AT1G32550, AT1G32560, AT1G32760, AT1G32860, AT1G32870, AT1G32910, AT1G32920, AT1G32940, AT1G32950, AT1G32960, AT1G32990, AT1G33030, AT1G33240, AT1G33420, AT1G33430, AT1G33440, AT1G33560, AT1G33600, AT1G33720, AT1G33730, AT1G33770, AT1G33811, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G34750, AT1G35140, AT1G35210, AT1G35230, AT1G35420, AT1G35580, AT1G35680, AT1G35710, AT1G35910, AT1G36622, AT1G36675, AT1G42970, AT1G42980, AT1G43160, AT1G43310, AT1G43910, AT1G44130, AT1G44575, AT1G45145, AT1G45163, AT1G46480, AT1G47056, AT1G47440, AT1G47510, AT1G47670, AT1G48000, AT1G48030, AT1G48315, AT1G48320, AT1G48370, AT1G48605, AT1G48870, AT1G49010, AT1G49050, AT1G49200, AT1G49230, AT1G49320, AT1G49450, AT1G49650, AT1G49730, AT1G49900, AT1G50420, AT1G50450, AT1G50560, AT1G50732, AT1G50900, AT1G50910, AT1G51080, AT1G51110, AT1G51130, AT1G51660, AT1G51670, AT1G51760, AT1G51780, AT1G51790, AT1G51800, AT1G51860, AT1G51890, AT1G51940, AT1G52000, AT1G52190, AT1G52200, AT1G52230, AT1G52240, AT1G52290, AT1G52315, AT1G52565, AT1G52690, AT1G52890, AT1G53030, AT1G53100, AT1G53230, AT1G53233, AT1G53250, AT1G53300, AT1G53620, AT1G53625, AT1G53700, AT1G53830, AT1G53920, AT1G54100, AT1G54130, AT1G54570, AT1G54730, AT1G54740, AT1G54780, AT1G54820, AT1G54890, AT1G55360, AT1G55370, AT1G55480, AT1G55490, AT1G55610, AT1G55670, AT1G55790, AT1G56120, AT1G56210, AT1G56240, AT1G56242, AT1G56430, AT1G56470, AT1G56500, AT1G56550, AT1G56650, AT1G56710, AT1G56720, AT1G57560, AT1G57630, AT1G57650, AT1G57943, AT1G57990, AT1G58150, AT1G58370, AT1G59590, AT1G59640, AT1G59740, AT1G59840, AT1G59950, AT1G60000, AT1G60160, AT1G60190, AT1G60390, AT1G60420, AT1G60550, AT1G60590, AT1G60600, AT1G60610, AT1G60690, AT1G60730, AT1G60800, AT1G60890, AT1G60950, AT1G61065, AT1G61140, AT1G61160, AT1G61215, AT1G61240, AT1G61260, AT1G61340, AT1G61420, AT1G61520, AT1G61550, AT1G61560, AT1G61800, AT1G61810, AT1G61820, AT1G62300, AT1G62422, AT1G62440, AT1G62510, AT1G62520, AT1G62570, AT1G62580, AT1G62750, AT1G62760, AT1G62975, AT1G63040, AT1G63120, AT1G63245, AT1G63400, AT1G63440, AT1G63460, AT1G63480, AT1G63720, AT1G63740, AT1G63820, AT1G63840, AT1G64150, AT1G64220, AT1G64390, AT1G64510, AT1G64610, AT1G64625, AT1G64660, AT1G64680, AT1G64720, AT1G64770, AT1G65230, AT1G65483, AT1G65490, AT1G65590, AT1G65610, AT1G65690, AT1G65860, AT1G65900, AT1G66040, AT1G66090, AT1G66100, AT1G66130, AT1G66140, AT1G66170, AT1G66180, AT1G66280, AT1G66410, AT1G66550, AT1G66570, AT1G66580, AT1G66590, AT1G66600, AT1G66725, AT1G66810, AT1G66820, AT1G66880, AT1G66960, AT1G67000, AT1G67060, AT1G67070, AT1G67090, AT1G67190, AT1G67195, AT1G67360, AT1G67520, AT1G67590, AT1G67635, AT1G67650, AT1G67700, AT1G67740, AT1G67750, AT1G67800, AT1G67810, AT1G67850, AT1G67856, AT1G67970, AT1G67980, AT1G68010, AT1G68190, AT1G68200, AT1G68250, AT1G68390, AT1G68400, AT1G68440, AT1G68520, AT1G68530, AT1G68560, AT1G68620, AT1G68700, AT1G68710, AT1G68740, AT1G68810, AT1G68820, AT1G68870, AT1G68890, AT1G68935, AT1G68940, AT1G69050, AT1G69140, AT1G69260, AT1G69480, AT1G69490, AT1G69520, AT1G69530, AT1G69610, AT1G69720, AT1G69790, AT1G69840, AT1G69880, AT1G69930, AT1G70220, AT1G70370, AT1G70410, AT1G70430, AT1G70460, AT1G70480, AT1G70500, AT1G70640, AT1G70690, AT1G70760, AT1G70810, AT1G70820, AT1G70895, AT1G70940, AT1G71100, AT1G71520, AT1G71690, AT1G71697, AT1G71870, AT1G71910, AT1G72000, AT1G72120, AT1G72125, AT1G72140, AT1G72220, AT1G72240, AT1G72270, AT1G72310, AT1G72330, AT1G72420, AT1G72540, AT1G72600, AT1G72610, AT1G72680, AT1G72690, AT1G72700, AT1G72770, AT1G72810, AT1G72890, AT1G72900, AT1G72910, AT1G72920, AT1G72940, AT1G72950, AT1G73010, AT1G73066, AT1G73110, AT1G73260, AT1G73325, AT1G73550, AT1G73590, AT1G73805, AT1G73810, AT1G73830, AT1G73965, AT1G74070, AT1G74080, AT1G74100, AT1G74200, AT1G74360, AT1G74370, AT1G74470, AT1G74670, AT1G74710, AT1G74730, AT1G74940, AT1G75170, AT1G75250, AT1G75360, AT1G75388, AT1G75390, AT1G75500, AT1G75510, AT1G75550, AT1G75690, AT1G75750, AT1G75780, AT1G75800, AT1G76040, AT1G76062, AT1G76240, AT1G76470, AT1G76590, AT1G76610, AT1G76650, AT1G76760, AT1G76970, AT1G76980, AT1G77000, AT1G77131, AT1G77145, AT1G77210, AT1G77280, AT1G77400, AT1G77490, AT1G77500, AT1G77630, AT1G77765, AT1G77890, AT1G77920, AT1G78020, AT1G78060, AT1G78190, AT1G78260, AT1G78320, AT1G78340, AT1G78380, AT1G78410, AT1G78450, AT1G78460, AT1G78570, AT1G78780, AT1G78820, AT1G78830, AT1G78860, AT1G78970, AT1G78995, AT1G79060, AT1G79400, AT1G79450, AT1G79680, AT1G79770, AT1G79900, AT1G80030, AT1G80080, AT1G80110, AT1G80120, AT1G80160, AT1G80300, AT1G80450, AT1G80520, AT1G80580, AT1G80590, AT1G80610, AT1G80630, AT1G80640, AT1G80690, AT1G80840, AT2G01010, AT2G01340, AT2G01420, AT2G01540, AT2G01590, AT2G01630, AT2G01650, AT2G01760, AT2G01818, AT2G01990, AT2G02020, AT2G02060, AT2G02061, AT2G02310, AT2G02340, AT2G02350, AT2G02390, AT2G02780, AT2G02870, AT2G02950, AT2G02980, AT2G03090, AT2G03270, AT2G03420, AT2G03750, AT2G03760, AT2G04040, AT2G04070, AT2G04100, AT2G04380, AT2G04400, AT2G04430, AT2G04450, AT2G04780, AT2G04790, AT2G04900, AT2G05070, AT2G05160, AT2G05320, AT2G05630, AT2G05790, AT2G05910, AT2G05914, AT2G05940, AT2G05995, AT2G06255, AT2G06850, AT2G07687, AT2G07688, AT2G07732, AT2G10940, AT2G12400, AT2G13360, AT2G13550, AT2G13790, AT2G13810, AT2G13820, AT2G13960, AT2G14290, AT2G14560, AT2G14620, AT2G14800, AT2G14880, AT2G14890, AT2G15090, AT2G15400, AT2G15440, AT2G15760, AT2G15880, AT2G16060, AT2G16270, AT2G16367, AT2G16530, AT2G16630, AT2G16700, AT2G16710, AT2G16720, AT2G16870, AT2G17040, AT2G17130, AT2G17220, AT2G17230, AT2G17500, AT2G17720, AT2G17740, AT2G17780, AT2G18000, AT2G18300, AT2G18560, AT2G18660, AT2G18690, AT2G18890, AT2G18969, AT2G18970, AT2G19170, AT2G19190, AT2G19620, AT2G19690, AT2G19710, AT2G19800, AT2G19930, AT2G20110, AT2G20142, AT2G20180, AT2G20210, AT2G20290, AT2G20340, AT2G20680, AT2G20825, AT2G20890, AT2G21050, AT2G21080, AT2G21140, AT2G21188, AT2G21330, AT2G21350, AT2G21470, AT2G21510, AT2G21660, AT2G21780, AT2G21830, AT2G21850, AT2G22200, AT2G22500, AT2G22560, AT2G22760, AT2G22770, AT2G22810, AT2G22890, AT2G22980, AT2G22990, AT2G23030, AT2G23100, AT2G23110, AT2G23130, AT2G23170, AT2G23320, AT2G23450, AT2G23590, AT2G23600, AT2G23680, AT2G23790, AT2G23810, AT2G24040, AT2G24060, AT2G24090, AT2G24150, AT2G24170, AT2G24240, AT2G24280, AT2G24285, AT2G24350, AT2G24580, AT2G24610, AT2G24762, AT2G24850, AT2G25130, AT2G25190, AT2G25240, AT2G25260, AT2G25270, AT2G25440, AT2G25460, AT2G25470, AT2G25520, AT2G25625, AT2G25737, AT2G25790, AT2G25840, AT2G25900, AT2G26080, AT2G26190, AT2G26250, AT2G26290, AT2G26300, AT2G26330, AT2G26400, AT2G26480, AT2G26530, AT2G26560, AT2G26640, AT2G26710, AT2G26750, AT2G26870, AT2G26900, AT2G26910, AT2G27040, AT2G27060, AT2G27130, AT2G27190, AT2G27385, AT2G27389, AT2G27390, AT2G27430, AT2G27510, AT2G27690, AT2G27810, AT2G27830, AT2G27920, AT2G28000, AT2G28040, AT2G28050, AT2G28110, AT2G28140, AT2G28160, AT2G28315, AT2G28400, AT2G28460, AT2G28500, AT2G28570, AT2G28790, AT2G28810, AT2G28870, AT2G28890, AT2G28930, AT2G28950, AT2G29050, AT2G29070, AT2G29110, AT2G29290, AT2G29310, AT2G29320, AT2G29350, AT2G29400, AT2G29460, AT2G29470, AT2G29480, AT2G29550, AT2G29630, AT2G29680, AT2G29720, AT2G29750, AT2G29950, AT2G29990, AT2G30080, AT2G30140, AT2G30170, AT2G30395, AT2G30400, AT2G30420, AT2G30550, AT2G30750, AT2G30760, AT2G30770, AT2G30790, AT2G30820, AT2G30830, AT2G31018, AT2G31020, AT2G31170, AT2G31200, AT2G31305, AT2G31390, AT2G31570, AT2G31790, AT2G31865, AT2G31870, AT2G31880, AT2G31902, AT2G31945, AT2G32100, AT2G32130, AT2G32140, AT2G32150, AT2G32160, AT2G32179, AT2G32180, AT2G32190, AT2G32210, AT2G32460, AT2G32510, AT2G32560, AT2G32640, AT2G32660, AT2G32670, AT2G32680, AT2G33060, AT2G33250, AT2G33330, AT2G33380, AT2G33520, AT2G33570, AT2G33580, AT2G33735, AT2G33860, AT2G34060, AT2G34070, AT2G34170, AT2G34180, AT2G34190, AT2G34420, AT2G34430, AT2G34490, AT2G34500, AT2G34580, AT2G34600, AT2G34610, AT2G34620, AT2G34680, AT2G34930, AT2G34940, AT2G34980, AT2G35000, AT2G35070, AT2G35190, AT2G35260, AT2G35290, AT2G35500, AT2G35550, AT2G35590, AT2G35637, AT2G35640, AT2G35730, AT2G35810, AT2G35859, AT2G35860, AT2G35940, AT2G35950, AT2G35960, AT2G36000, AT2G36050, AT2G36110, AT2G36200, AT2G36570, AT2G36640, AT2G36830, AT2G36854, AT2G36990, AT2G37070, AT2G37090, AT2G37110, AT2G37170, AT2G37180, AT2G37220, AT2G37440, AT2G37450, AT2G37640, AT2G37670, AT2G37750, AT2G37760, AT2G37870, AT2G37950, AT2G37980, AT2G38050, AT2G38080, AT2G38120, AT2G38170, AT2G38210, AT2G38240, AT2G38250, AT2G38340, AT2G38460, AT2G38490, AT2G38530, AT2G38540, AT2G38790, AT2G38860, AT2G39030, AT2G39050, AT2G39110, AT2G39130, AT2G39140, AT2G39190, AT2G39230, AT2G39320, AT2G39350, AT2G39420, AT2G39430, AT2G39470, AT2G39518, AT2G39520, AT2G39530, AT2G39700, AT2G39730, AT2G39870, AT2G40008, AT2G40095, AT2G40113, AT2G40140, AT2G40330, AT2G40340, AT2G40435, AT2G40540, AT2G40610, AT2G40690, AT2G40750, AT2G41070, AT2G41090, AT2G41100, AT2G41200, AT2G41290, AT2G41380, AT2G41410, AT2G41480, AT2G41550, AT2G41660, AT2G41720, AT2G41820, AT2G41835, AT2G41990, AT2G42060, AT2G42170, AT2G42290, AT2G42300, AT2G42320, AT2G42350, AT2G42380, AT2G42560, AT2G42870, AT2G42940, AT2G42950, AT2G42980, AT2G43000, AT2G43040, AT2G43100, AT2G43120, AT2G43140, AT2G43320, AT2G43360, AT2G43570, AT2G43580, AT2G43820, AT2G44180, AT2G44230, AT2G44383, AT2G44450, AT2G44578, AT2G44600, AT2G44740, AT2G45050, AT2G45170, AT2G45180, AT2G45220, AT2G45330, AT2G45340, AT2G45470, AT2G45500, AT2G45560, AT2G45570, AT2G45660, AT2G45760, AT2G45770, AT2G45850, AT2G45870, AT2G45960, AT2G46040, AT2G46250, AT2G46270, AT2G46380, AT2G46400, AT2G46430, AT2G46440, AT2G46510, AT2G46620, AT2G46630, AT2G46670, AT2G46680, AT2G46790, AT2G46820, AT2G46940, AT2G46980, AT2G47000, AT2G47130, AT2G47140, AT2G47190, AT2G47370, AT2G47440, AT2G47560, AT2G47590, AT2G47720, AT2G47770, AT2G47820, AT2G47840, AT2G47930, AT2G47940, AT2G47950, AT3G01060, AT3G01080, AT3G01290, AT3G01440, AT3G01480, AT3G01490, AT3G01500, AT3G01810, AT3G01830, AT3G01840, AT3G01970, AT3G02050, AT3G02140, AT3G02150, AT3G02160, AT3G02190, AT3G02640, AT3G02730, AT3G02770, AT3G02800, AT3G03310, AT3G03341, AT3G03440, AT3G03450, AT3G03460, AT3G03470, AT3G03490, AT3G03560, AT3G03610, AT3G03650, AT3G03700, AT3G03702, AT3G03780, AT3G03980, AT3G04000, AT3G04060, AT3G04070, AT3G04140, AT3G04160, AT3G04220, AT3G04420, AT3G04550, AT3G04620, AT3G04640, AT3G05190, AT3G05330, AT3G05360, AT3G05390, AT3G05500, AT3G05620, AT3G05830, AT3G05870, AT3G05905, AT3G06070, AT3G06140, AT3G06145, AT3G06160, AT3G06320, AT3G06420, AT3G06433, AT3G06490, AT3G06500, AT3G06750, AT3G06770, AT3G06890, AT3G07010, AT3G07195, AT3G07200, AT3G07210, AT3G07320, AT3G07370, AT3G07540, AT3G07600, AT3G07700, AT3G07720, AT3G07870, AT3G08030, AT3G08720, AT3G08760, AT3G08870, AT3G08920, AT3G08940, AT3G08990, AT3G09035, AT3G09160, AT3G09270, AT3G09280, AT3G09490, AT3G09580, AT3G09780, AT3G09800, AT3G09830, AT3G09910, AT3G09940, AT3G09960, AT3G10010, AT3G10040, AT3G10080, AT3G10150, AT3G10160, AT3G10200, AT3G10310, AT3G10340, AT3G10420, AT3G10490, AT3G10500, AT3G10640, AT3G10815, AT3G10840, AT3G11000, AT3G11010, AT3G11040, AT3G11080, AT3G11110, AT3G11150, AT3G11330, AT3G11340, AT3G11480, AT3G11580, AT3G11700, AT3G11820, AT3G11840, AT3G12040, AT3G12110, AT3G12220, AT3G12230, AT3G12320, AT3G12510, AT3G12520, AT3G12610, AT3G12760, AT3G12780, AT3G13000, AT3G13065, AT3G13080, AT3G13090, AT3G13100, AT3G13120, AT3G13180, AT3G13235, AT3G13240, AT3G13380, AT3G13430, AT3G13470, AT3G13510, AT3G13520, AT3G13610, AT3G13730, AT3G13750, AT3G13782, AT3G13900, AT3G13910, AT3G13950, AT3G14050, AT3G14060, AT3G14130, AT3G14210, AT3G14240, AT3G14280, AT3G14310, AT3G14330, AT3G14350, AT3G14415, AT3G14420, AT3G14430, AT3G14440, AT3G14470, AT3G14475, AT3G14560, AT3G14590, AT3G14610, AT3G14680, AT3G14700, AT3G14840, AT3G15030, AT3G15110, AT3G15354, AT3G15355, AT3G15500, AT3G15530, AT3G15536, AT3G15570, AT3G15680, AT3G15720, AT3G15760, AT3G15770, AT3G15800, AT3G15850, AT3G16150, AT3G16180, AT3G16240, AT3G16250, AT3G16330, AT3G16370, AT3G16520, AT3G16530, AT3G16565, AT3G16660, AT3G16850, AT3G16980, AT3G16990, AT3G17000, AT3G17350, AT3G17380, AT3G17420, AT3G17609, AT3G17640, AT3G17690, AT3G17790, AT3G17800, AT3G17810, AT3G17820, AT3G17830, AT3G18050, AT3G18080, AT3G18090, AT3G18110, AT3G18240, AT3G18250, AT3G18530, AT3G18560, AT3G18670, AT3G18710, AT3G18773, AT3G18800, AT3G18850, AT3G18890, AT3G19002, AT3G19010, AT3G19120, AT3G19270, AT3G19390, AT3G19480, AT3G19580, AT3G19660, AT3G19710, AT3G19850, AT3G19910, AT3G19970, AT3G20015, AT3G20260, AT3G20340, AT3G20350, AT3G20640, AT3G20760, AT3G20810, AT3G20820, AT3G21080, AT3G21150, AT3G21230, AT3G21260, AT3G21320, AT3G21460, AT3G21520, AT3G21700, AT3G21810, AT3G21870, AT3G22120, AT3G22121, AT3G22142, AT3G22150, AT3G22160, AT3G22235, AT3G22370, AT3G22400, AT3G22560, AT3G22600, AT3G22790, AT3G22810, AT3G22840, AT3G22910, AT3G23120, AT3G23240, AT3G23450, AT3G23700, AT3G23730, AT3G23760, AT3G23810, AT3G23870, AT3G23880, AT3G24255, AT3G24320, AT3G24400, AT3G24430, AT3G24460, AT3G24480, AT3G25010, AT3G25020, AT3G25130, AT3G25250, AT3G25290, AT3G25400, AT3G25410, AT3G25500, AT3G25510, AT3G25700, AT3G25805, AT3G25870, AT3G25882, AT3G25920, AT3G26060, AT3G26090, AT3G26210, AT3G26220, AT3G26240, AT3G26310, AT3G26320, AT3G26440, AT3G26445, AT3G26460, AT3G26470, AT3G26500, AT3G26510, AT3G26520, AT3G26570, AT3G26600, AT3G26650, AT3G26690, AT3G26830, AT3G26840, AT3G26932, AT3G27030, AT3G27210, AT3G27290, AT3G27810, AT3G27850, AT3G27900, AT3G28007, AT3G28040, AT3G28070, AT3G28080, AT3G28130, AT3G28200, AT3G28210, AT3G28340, AT3G28480, AT3G28510, AT3G28540, AT3G28570, AT3G28580, AT3G28600, AT3G28850, AT3G28860, AT3G28890, AT3G28930, AT3G29185, AT3G29250, AT3G29320, AT3G29575, AT3G29670, AT3G30720, AT3G30775, AT3G41768, AT3G42670, AT3G43250, AT3G43790, AT3G44300, AT3G44350, AT3G44400, AT3G44490, AT3G44717, AT3G44720, AT3G44830, AT3G44860, AT3G44990, AT3G45010, AT3G45130, AT3G45410, AT3G45420, AT3G45430, AT3G45620, AT3G45638, AT3G45940, AT3G46080, AT3G46090, AT3G46130, AT3G46280, AT3G46370, AT3G46510, AT3G46550, AT3G46580, AT3G46658, AT3G46660, AT3G46690, AT3G46780, AT3G46900, AT3G46930, AT3G46970, AT3G47090, AT3G47340, AT3G47400, AT3G47480, AT3G47490, AT3G47530, AT3G47540, AT3G47780, AT3G48020, AT3G48080, AT3G48090, AT3G48200, AT3G48240, AT3G48390, AT3G48420, AT3G48460, AT3G48490, AT3G48520, AT3G48570, AT3G48580, AT3G48610, AT3G48630, AT3G48640, AT3G48650, AT3G48700, AT3G48720, AT3G48770, AT3G48850, AT3G49110, AT3G49120, AT3G49130, AT3G49260, AT3G49290, AT3G49540, AT3G49580, AT3G49670, AT3G49740, AT3G50220, AT3G50240, AT3G50260, AT3G50280, AT3G50310, AT3G50470, AT3G50480, AT3G50550, AT3G50685, AT3G50760, AT3G50770, AT3G50790, AT3G50800, AT3G50820, AT3G50840, AT3G50890, AT3G50900, AT3G51080, AT3G51090, AT3G51150, AT3G51250, AT3G51330, AT3G51420, AT3G51430, AT3G51440, AT3G51470, AT3G51480, AT3G51510, AT3G51670, AT3G51750, AT3G51820, AT3G51860, AT3G51890, AT3G51910, AT3G52110, AT3G52115, AT3G52150, AT3G52310, AT3G52370, AT3G52400, AT3G52430, AT3G52470, AT3G52540, AT3G52630, AT3G52670, AT3G52720, AT3G52740, AT3G52742, AT3G52748, AT3G52770, AT3G52870, AT3G52940, AT3G52960, AT3G53120, AT3G53130, AT3G53140, AT3G53150, AT3G53190, AT3G53230, AT3G53235, AT3G53420, AT3G53460, AT3G53650, AT3G53800, AT3G53950, AT3G54050, AT3G54150, AT3G54270, AT3G54320, AT3G54400, AT3G54600, AT3G54690, AT3G54830, AT3G54880, AT3G54910, AT3G54920, AT3G54950, AT3G55330, AT3G55470, AT3G55630, AT3G55640, AT3G55700, AT3G55730, AT3G55800, AT3G55880, AT3G55950, AT3G56160, AT3G56170, AT3G56275, AT3G56370, AT3G56400, AT3G56500, AT3G56650, AT3G56710, AT3G56870, AT3G56891, AT3G56940, AT3G57010, AT3G57090, AT3G57180, AT3G57380, AT3G57450, AT3G57460, AT3G57480, AT3G57520, AT3G57550, AT3G57830, AT3G57880, AT3G57950, AT3G58120, AT3G58600, AT3G58620, AT3G58820, AT3G59100, AT3G59250, AT3G59400, AT3G59570, AT3G59700, AT3G59890, AT3G59900, AT3G60110, AT3G60160, AT3G60164, AT3G60180, AT3G60320, AT3G60370, AT3G60420, AT3G60450, AT3G60470, AT3G60520, AT3G60530, AT3G60540, AT3G60630, AT3G60750, AT3G60961, AT3G60966, AT3G61160, AT3G61185, AT3G61190, AT3G61198, AT3G61280, AT3G61390, AT3G61450, AT3G61470, AT3G61490, AT3G61750, AT3G61760, AT3G61820, AT3G61870, AT3G61890, AT3G61930, AT3G61950, AT3G62020, AT3G62070, AT3G62550, AT3G62590, AT3G62690, AT3G62740, AT3G62750, AT3G62760, AT3G62780, AT3G62910, AT3G62960, AT3G63010, AT3G63030, AT3G63050, AT3G63060, AT3G63110, AT3G63140, AT3G63160, AT3G63170, AT3G63380, AT3G63410, AT3G63510, AT4G00165, AT4G00234, AT4G00240, AT4G00370, AT4G00400, AT4G00550, AT4G00700, AT4G00950, AT4G01010, AT4G01130, AT4G01310, AT4G01330, AT4G01360, AT4G01430, AT4G01440, AT4G01460, AT4G01535, AT4G01540, AT4G01670, AT4G01895, AT4G02220, AT4G02290, AT4G02330, AT4G02380, AT4G02520, AT4G02550, AT4G02630, AT4G02660, AT4G02730, AT4G02770, AT4G03010, AT4G03060, AT4G03140, AT4G03190, AT4G03210, AT4G03280, AT4G03320, AT4G03450, AT4G04330, AT4G04340, AT4G04350, AT4G04450, AT4G04490, AT4G04540, AT4G04620, AT4G04695, AT4G04810, AT4G04910, AT4G05010, AT4G05020, AT4G05030, AT4G05100, AT4G05497, AT4G07400, AT4G07960, AT4G08290, AT4G08555, AT4G08770, AT4G09010, AT4G09160, AT4G09420, AT4G09460, AT4G09570, AT4G09640, AT4G09650, AT4G09750, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10720, AT4G10800, AT4G10860, AT4G10955, AT4G10960, AT4G11000, AT4G11070, AT4G11140, AT4G11170, AT4G11290, AT4G11450, AT4G11655, AT4G11690, AT4G11840, AT4G11850, AT4G11890, AT4G11910, AT4G12030, AT4G12120, AT4G12310, AT4G12320, AT4G12330, AT4G12390, AT4G12420, AT4G12480, AT4G12720, AT4G12730, AT4G12800, AT4G12830, AT4G12850, AT4G12900, AT4G12917, AT4G12970, AT4G12980, AT4G13260, AT4G13280, AT4G13340, AT4G13560, AT4G13820, AT4G13900, AT4G13990, AT4G14365, AT4G14368, AT4G14370, AT4G14480, AT4G14610, AT4G14630, AT4G14713, AT4G14740, AT4G14750, AT4G14940, AT4G15070, AT4G15100, AT4G15165, AT4G15200, AT4G15210, AT4G15230, AT4G15248, AT4G15280, AT4G15417, AT4G15420, AT4G15510, AT4G15700, AT4G15810, AT4G15960, AT4G16000, AT4G16141, AT4G16370, AT4G16690, AT4G16820, AT4G16980, AT4G17180, AT4G17340, AT4G17460, AT4G17500, AT4G17560, AT4G17600, AT4G17660, AT4G17670, AT4G17695, AT4G17810, AT4G17900, AT4G18170, AT4G18197, AT4G18250, AT4G18360, AT4G18430, AT4G18670, AT4G18760, AT4G18950, AT4G18970, AT4G18980, AT4G19045, AT4G19170, AT4G19380, AT4G19460, AT4G19530, AT4G19925, AT4G19970, AT4G20110, AT4G20130, AT4G20140, AT4G20320, AT4G20360, AT4G20430, AT4G20460, AT4G20820, AT4G20840, AT4G20970, AT4G21120, AT4G21280, AT4G21380, AT4G21390, AT4G21440, AT4G21534, AT4G21580, AT4G21610, AT4G21680, AT4G21730, AT4G21830, AT4G21840, AT4G21850, AT4G21870, AT4G21930, AT4G21980, AT4G22070, AT4G22120, AT4G22305, AT4G22520, AT4G22530, AT4G22590, AT4G22592, AT4G22690, AT4G22890, AT4G22920, AT4G22970, AT4G22980, AT4G23000, AT4G23150, AT4G23270, AT4G23271, AT4G23290, AT4G23320, AT4G23450, AT4G23470, AT4G23550, AT4G23610, AT4G23700, AT4G23740, AT4G23820, AT4G23885, AT4G23940, AT4G24000, AT4G24030, AT4G24040, AT4G24110, AT4G24250, AT4G24340, AT4G24570, AT4G24580, AT4G24660, AT4G24780, AT4G24790, AT4G24810, AT4G24930, AT4G24970, AT4G24972, AT4G24990, AT4G25050, AT4G25070, AT4G25080, AT4G25100, AT4G25225, AT4G25390, AT4G25480, AT4G25490, AT4G25610, AT4G25690, AT4G25692, AT4G25880, AT4G25910, AT4G25960, AT4G25990, AT4G26060, AT4G26070, AT4G26080, AT4G26120, AT4G26200, AT4G26260, AT4G26270, AT4G26370, AT4G26470, AT4G26520, AT4G26530, AT4G26540, AT4G26542, AT4G26810, AT4G26990, AT4G27030, AT4G27410, AT4G27440, AT4G27530, AT4G27720, AT4G27730, AT4G27740, AT4G27745, AT4G27830, AT4G27970, AT4G27980, AT4G28050, AT4G28080, AT4G28088, AT4G28162, AT4G28180, AT4G28390, AT4G28485, AT4G28570, AT4G28660, AT4G28703, AT4G28750, AT4G28780, AT4G29040, AT4G29060, AT4G29140, AT4G29230, AT4G29240, AT4G29360, AT4G29610, AT4G29740, AT4G29810, AT4G29930, AT4G29950, AT4G30020, AT4G30250, AT4G30290, AT4G30390, AT4G30410, AT4G30430, AT4G30520, AT4G30610, AT4G30640, AT4G30680, AT4G30993, AT4G31000, AT4G31060, AT4G31230, AT4G31290, AT4G31330, AT4G31800, AT4G31820, AT4G31850, AT4G31860, AT4G31870, AT4G31875, AT4G31890, AT4G32280, AT4G32340, AT4G32780, AT4G32785, AT4G32870, AT4G32880, AT4G32980, AT4G33000, AT4G33010, AT4G33050, AT4G33150, AT4G33220, AT4G33260, AT4G33300, AT4G33355, AT4G33467, AT4G33470, AT4G33660, AT4G33925, AT4G33970, AT4G34060, AT4G34090, AT4G34120, AT4G34131, AT4G34200, AT4G34220, AT4G34290, AT4G34380, AT4G34390, AT4G34770, AT4G34830, AT4G34860, AT4G34900, AT4G34970, AT4G34980, AT4G35090, AT4G35110, AT4G35165, AT4G35170, AT4G35180, AT4G35250, AT4G35290, AT4G35420, AT4G35440, AT4G35500, AT4G35590, AT4G35600, AT4G35640, AT4G35840, AT4G36090, AT4G36150, AT4G36180, AT4G36190, AT4G36380, AT4G36410, AT4G36540, AT4G36700, AT4G36710, AT4G36820, AT4G36900, AT4G36950, AT4G36988, AT4G36990, AT4G37010, AT4G37030, AT4G37150, AT4G37180, AT4G37240, AT4G37330, AT4G37370, AT4G37390, AT4G37450, AT4G37550, AT4G37553, AT4G37610, AT4G37690, AT4G37700, AT4G37800, AT4G37850, AT4G37900, AT4G37925, AT4G37930, AT4G37990, AT4G38000, AT4G38060, AT4G38160, AT4G38260, AT4G38400, AT4G38430, AT4G38560, AT4G38660, AT4G38670, AT4G38770, AT4G38970, AT4G39020, AT4G39030, AT4G39190, AT4G39350, AT4G39380, AT4G39404, AT4G39610, AT4G39670, AT4G39710, AT4G39770, AT4G39780, AT4G39830, AT4G39890, AT4G40042, AT5G01050, AT5G01075, AT5G01100, AT5G01210, AT5G01215, AT5G01240, AT5G01250, AT5G01380, AT5G01490, AT5G01530, AT5G01550, AT5G01610, AT5G01640, AT5G01730, AT5G01740, AT5G01820, AT5G01850, AT5G01900, AT5G01920, AT5G01930, AT5G02020, AT5G02100, AT5G02160, AT5G02170, AT5G02180, AT5G02320, AT5G02490, AT5G02502, AT5G02540, AT5G02570, AT5G02590, AT5G02600, AT5G02690, AT5G02760, AT5G02780, AT5G02890, AT5G02940, AT5G03150, AT5G03170, AT5G03210, AT5G03270, AT5G03350, AT5G03610, AT5G03890, AT5G04010, AT5G04160, AT5G04180, AT5G04230, AT5G04250, AT5G04360, AT5G04530, AT5G04680, AT5G04720, AT5G04810, AT5G04860, AT5G04900, AT5G04950, AT5G05300, AT5G05460, AT5G05580, AT5G05730, AT5G05740, AT5G05890, AT5G06090, AT5G06250, AT5G06310, AT5G06390, AT5G06470, AT5G06670, AT5G06750, AT5G06760, AT5G06860, AT5G06980, AT5G06990, AT5G07010, AT5G07020, AT5G07030, AT5G07070, AT5G07310, AT5G07322, AT5G07440, AT5G07570, AT5G07590, AT5G07650, AT5G07660, AT5G07690, AT5G07780, AT5G07900, AT5G07990, AT5G08000, AT5G08050, AT5G08240, AT5G08565, AT5G08630, AT5G08790, AT5G09290, AT5G09320, AT5G09440, AT5G09470, AT5G09660, AT5G09730, AT5G09800, AT5G09820, AT5G09980, AT5G10150, AT5G10180, AT5G10250, AT5G10340, AT5G10380, AT5G10430, AT5G10440, AT5G10470, AT5G10530, AT5G10625, AT5G10690, AT5G10695, AT5G11070, AT5G11210, AT5G11480, AT5G11500, AT5G11520, AT5G11550, AT5G11650, AT5G11860, AT5G11870, AT5G11920, AT5G11970, AT5G12250, AT5G12300, AT5G12340, AT5G12860, AT5G12880, AT5G12900, AT5G12950, AT5G13080, AT5G13140, AT5G13190, AT5G13220, AT5G13320, AT5G13330, AT5G13400, AT5G13510, AT5G13630, AT5G13690, AT5G13730, AT5G13820, AT5G13920, AT5G14200, AT5G14420, AT5G14450, AT5G14470, AT5G14565, AT5G14570, AT5G14650, AT5G14740, AT5G14760, AT5G14920, AT5G14930, AT5G15190, AT5G15210, AT5G15350, AT5G15580, AT5G15870, AT5G16000, AT5G16030, AT5G16170, AT5G16350, AT5G16360, AT5G16390, AT5G16400, AT5G16450, AT5G16530, AT5G16540, AT5G16590, AT5G16600, AT5G16715, AT5G16810, AT5G16880, AT5G17060, AT5G17330, AT5G17390, AT5G17450, AT5G17520, AT5G17670, AT5G17760, AT5G17780, AT5G18130, AT5G18270, AT5G18570, AT5G18660, AT5G18670, AT5G18780, AT5G19190, AT5G19230, AT5G19240, AT5G19440, AT5G19450, AT5G19490, AT5G19780, AT5G19810, AT5G19930, AT5G19940, AT5G20000, AT5G20230, AT5G20270, AT5G20400, AT5G20635, AT5G20740, AT5G20830, AT5G20870, AT5G20910, AT5G20960, AT5G21100, AT5G21222, AT5G21430, AT5G21910, AT5G21920, AT5G21930, AT5G22060, AT5G22300, AT5G22340, AT5G22380, AT5G22460, AT5G22530, AT5G22545, AT5G22570, AT5G22630, AT5G22640, AT5G22800, AT5G23010, AT5G23060, AT5G23160, AT5G23170, AT5G23210, AT5G23360, AT5G23540, AT5G23580, AT5G23870, AT5G23980, AT5G24000, AT5G24010, AT5G24090, AT5G24140, AT5G24200, AT5G24205, AT5G24206, AT5G24210, AT5G24300, AT5G24490, AT5G24530, AT5G24540, AT5G24655, AT5G24750, AT5G24910, AT5G24920, AT5G25130, AT5G25140, AT5G25190, AT5G25240, AT5G25250, AT5G25260, AT5G25280, AT5G25440, AT5G25450, AT5G25451, AT5G25460, AT5G25590, AT5G25820, AT5G25830, AT5G25910, AT5G25920, AT5G25930, AT5G26010, AT5G26170, AT5G26220, AT5G26260, AT5G26330, AT5G26340, AT5G26622, AT5G26670, AT5G26690, AT5G26700, AT5G26731, AT5G26820, AT5G26920, AT5G27000, AT5G27060, AT5G27360, AT5G27390, AT5G27420, AT5G27520, AT5G27610, AT5G27660, AT5G27730, AT5G27830, AT5G27920, AT5G28020, AT5G28050, AT5G28237, AT5G28450, AT5G28500, AT5G28610, AT5G28830, AT5G33280, AT5G34780, AT5G34795, AT5G35170, AT5G35200, AT5G35520, AT5G35580, AT5G35630, AT5G35670, AT5G35680, AT5G35740, AT5G35750, AT5G35790, AT5G36920, AT5G37070, AT5G37480, AT5G37600, AT5G37660, AT5G37740, AT5G38030, AT5G38280, AT5G38410, AT5G38420, AT5G38430, AT5G38510, AT5G38520, AT5G38710, AT5G38895, AT5G38900, AT5G39040, AT5G39050, AT5G39090, AT5G39210, AT5G39520, AT5G39610, AT5G39660, AT5G39670, AT5G39680, AT5G39785, AT5G39950, AT5G40010, AT5G40150, AT5G40210, AT5G40240, AT5G40330, AT5G40348, AT5G40380, AT5G40460, AT5G40610, AT5G40690, AT5G40730, AT5G40880, AT5G40890, AT5G41050, AT5G41080, AT5G41160, AT5G41180, AT5G41280, AT5G41315, AT5G41550, AT5G41560, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41750, AT5G41920, AT5G42010, AT5G42050, AT5G42070, AT5G42100, AT5G42200, AT5G42240, AT5G42250, AT5G42380, AT5G42830, AT5G43150, AT5G43580, AT5G43650, AT5G43750, AT5G43860, AT5G43870, AT5G43890, AT5G43910, AT5G44020, AT5G44050, AT5G44130, AT5G44160, AT5G44190, AT5G44260, AT5G44460, AT5G44480, AT5G44530, AT5G44570, AT5G44600, AT5G44680, AT5G44820, AT5G44990, AT5G45000, AT5G45070, AT5G45080, AT5G45090, AT5G45100, AT5G45110, AT5G45310, AT5G45340, AT5G45370, AT5G45440, AT5G45475, AT5G45490, AT5G45510, AT5G45630, AT5G45650, AT5G45670, AT5G45770, AT5G45830, AT5G45840, AT5G45930, AT5G46110, AT5G46180, AT5G46220, AT5G46230, AT5G46290, AT5G46350, AT5G46440, AT5G46520, AT5G46570, AT5G46600, AT5G46690, AT5G46870, AT5G47050, AT5G47060, AT5G47070, AT5G47120, AT5G47130, AT5G47140, AT5G47200, AT5G47440, AT5G47500, AT5G47550, AT5G47730, AT5G47740, AT5G47900, AT5G48180, AT5G48290, AT5G48320, AT5G48360, AT5G48400, AT5G48410, AT5G48545, AT5G48790, AT5G48820, AT5G48900, AT5G48910, AT5G49020, AT5G49170, AT5G49215, AT5G49390, AT5G49525, AT5G49570, AT5G49680, AT5G49690, AT5G49700, AT5G49730, AT5G49740, AT5G50090, AT5G50350, AT5G50360, AT5G50380, AT5G50420, AT5G50450, AT5G51060, AT5G51070, AT5G51380, AT5G51460, AT5G51480, AT5G51550, AT5G51560, AT5G51630, AT5G51640, AT5G51720, AT5G51740, AT5G51820, AT5G51830, AT5G51850, AT5G52100, AT5G52110, AT5G52190, AT5G52570, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52770, AT5G52800, AT5G52820, AT5G52970, AT5G52990, AT5G53120, AT5G53144, AT5G53290, AT5G53360, AT5G53490, AT5G53588, AT5G53710, AT5G53740, AT5G53820, AT5G53830, AT5G53900, AT5G53905, AT5G53970, AT5G54040, AT5G54070, AT5G54075, AT5G54180, AT5G54190, AT5G54270, AT5G54470, AT5G54490, AT5G54610, AT5G54650, AT5G54700, AT5G54770, AT5G54840, AT5G54860, AT5G54940, AT5G54980, AT5G55090, AT5G55170, AT5G55220, AT5G55380, AT5G55400, AT5G55410, AT5G55450, AT5G55460, AT5G55480, AT5G55740, AT5G55850, AT5G56040, AT5G56050, AT5G56340, AT5G56590, AT5G56850, AT5G56890, AT5G56970, AT5G57050, AT5G57100, AT5G57150, AT5G57170, AT5G57260, AT5G57500, AT5G57510, AT5G57780, AT5G57785, AT5G57900, AT5G57910, AT5G58140, AT5G58160, AT5G58250, AT5G58260, AT5G58300, AT5G58310, AT5G58330, AT5G58390, AT5G58480, AT5G58600, AT5G58620, AT5G58840, AT5G59130, AT5G59140, AT5G59220, AT5G59250, AT5G59490, AT5G59530, AT5G59580, AT5G59590, AT5G59680, AT5G59750, AT5G59760, AT5G59890, AT5G60280, AT5G60490, AT5G60660, AT5G60730, AT5G60800, AT5G60900, AT5G60910, AT5G61010, AT5G61070, AT5G61130, AT5G61160, AT5G61190, AT5G61210, AT5G61250, AT5G61350, AT5G61390, AT5G61420, AT5G61430, AT5G61490, AT5G61530, AT5G61560, AT5G61590, AT5G61865, AT5G61900, AT5G62020, AT5G62150, AT5G62180, AT5G62280, AT5G62350, AT5G62360, AT5G62480, AT5G62670, AT5G62720, AT5G62730, AT5G62820, AT5G62840, AT5G62890, AT5G63130, AT5G63135, AT5G63180, AT5G63225, AT5G63240, AT5G63350, AT5G63500, AT5G63650, AT5G63810, AT5G63880, AT5G63905, AT5G63990, AT5G64040, AT5G64120, AT5G64280, AT5G64370, AT5G64380, AT5G64530, AT5G64640, AT5G64780, AT5G64800, AT5G64810, AT5G64890, AT5G64990, AT5G65010, AT5G65090, AT5G65170, AT5G65207, AT5G65280, AT5G65300, AT5G65390, AT5G65410, AT5G65700, AT5G65730, AT5G66170, AT5G66330, AT5G66520, AT5G66570, AT5G66580, AT5G66770, AT5G66890, AT5G66910, AT5G66920, AT5G67080, AT5G67310, AT5G67340, AT5G67360, AT5G67385, AT5G67450, AT5G67600, ATCG00010, ATCG00020, ATCG00040, ATCG00065, ATCG00080, ATCG00100, ATCG00120, ATCG00130, ATCG00140, ATCG00150, ATCG00160, ATCG00210, ATCG00220, ATCG00270, ATCG00280, ATCG00290, ATCG00330, ATCG00340, ATCG00350, ATCG00360, ATCG00380, ATCG00400, ATCG00440, ATCG00450, ATCG00490, ATCG00500, ATCG00510, ATCG00520, ATCG00550, ATCG00560, ATCG00570, ATCG00580, ATCG00590, ATCG00600, ATCG00650, ATCG00680, ATCG00690, ATCG00710, ATCG00720, ATCG00730, ATCG00890, ATCG00900, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG01000, ATCG01010, ATCG01050, ATCG01060, ATCG01070, ATCG01080, ATCG01090, ATCG01100, ATCG01130, ATCG01150, ATCG01180, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00060, ATMG00280, ATMG01380, ATMG01390
## 58 NA
## 59 NA
## 60 AT1G01010, AT1G01070, AT1G01120, AT1G01190, AT1G01200, AT1G01300, AT1G01340, AT1G01370, AT1G01430, AT1G01480, AT1G01520, AT1G01560, AT1G01590, AT1G01610, AT1G01620, AT1G01680, AT1G01690, AT1G02220, AT1G02230, AT1G02310, AT1G02390, AT1G02450, AT1G02520, AT1G02640, AT1G02650, AT1G02660, AT1G02750, AT1G03050, AT1G03210, AT1G03290, AT1G03300, AT1G03400, AT1G03495, AT1G03600, AT1G03630, AT1G03660, AT1G03680, AT1G03850, AT1G03870, AT1G03990, AT1G04040, AT1G04160, AT1G04310, AT1G04360, AT1G04420, AT1G04570, AT1G04600, AT1G05000, AT1G05100, AT1G05170, AT1G05310, AT1G05420, AT1G05570, AT1G05680, AT1G05835, AT1G05880, AT1G06160, AT1G06180, AT1G06240, AT1G06250, AT1G06260, AT1G06265, AT1G06460, AT1G06620, AT1G06660, AT1G06680, AT1G06850, AT1G07000, AT1G07110, AT1G07320, AT1G07430, AT1G07440, AT1G07490, AT1G07500, AT1G07590, AT1G07600, AT1G07610, AT1G07620, AT1G07630, AT1G07880, AT1G08050, AT1G08090, AT1G08300, AT1G08630, AT1G08810, AT1G08860, AT1G08920, AT1G08940, AT1G09090, AT1G09240, AT1G09340, AT1G09350, AT1G09440, AT1G09500, AT1G09560, AT1G09630, AT1G09750, AT1G09930, AT1G10070, AT1G10410, AT1G10520, AT1G10585, AT1G10690, AT1G10710, AT1G10910, AT1G10960, AT1G11000, AT1G11100, AT1G11130, AT1G11330, AT1G11362, AT1G11400, AT1G11480, AT1G11545, AT1G11670, AT1G11720, AT1G11860, AT1G11905, AT1G12060, AT1G12090, AT1G12500, AT1G12540, AT1G12730, AT1G12860, AT1G12900, AT1G13150, AT1G13250, AT1G13330, AT1G13340, AT1G13420, AT1G13520, AT1G13790, AT1G14030, AT1G14150, AT1G14160, AT1G14185, AT1G14260, AT1G14270, AT1G14345, AT1G14440, AT1G14540, AT1G14687, AT1G14700, AT1G14720, AT1G14870, AT1G14880, AT1G14900, AT1G15000, AT1G15010, AT1G15040, AT1G15080, AT1G15125, AT1G15160, AT1G15180, AT1G15290, AT1G15380, AT1G15405, AT1G15510, AT1G15520, AT1G15550, AT1G15670, AT1G15690, AT1G15790, AT1G15820, AT1G15980, AT1G15990, AT1G16080, AT1G16150, AT1G16300, AT1G16410, AT1G16420, AT1G16670, AT1G16720, AT1G17020, AT1G17200, AT1G17380, AT1G17500, AT1G17600, AT1G17615, AT1G17650, AT1G17745, AT1G17750, AT1G18000, AT1G18010, AT1G18250, AT1G18415, AT1G18420, AT1G18570, AT1G18620, AT1G18735, AT1G18890, AT1G19020, AT1G19150, AT1G19180, AT1G19220, AT1G19230, AT1G19250, AT1G19270, AT1G19350, AT1G19450, AT1G19490, AT1G19640, AT1G20010, AT1G20020, AT1G20190, AT1G20340, AT1G20470, AT1G20780, AT1G20823, AT1G21100, AT1G21200, AT1G21210, AT1G21240, AT1G21250, AT1G21390, AT1G21400, AT1G21500, AT1G21520, AT1G21525, AT1G21740, AT1G21880, AT1G21910, AT1G22220, AT1G22280, AT1G22370, AT1G22400, AT1G22403, AT1G22410, AT1G22480, AT1G22510, AT1G22550, AT1G22590, AT1G22840, AT1G22985, AT1G23052, AT1G23080, AT1G23120, AT1G23200, AT1G23205, AT1G23470, AT1G23480, AT1G23550, AT1G23560, AT1G23740, AT1G23840, AT1G23940, AT1G24140, AT1G24150, AT1G24577, AT1G25240, AT1G25450, AT1G26130, AT1G26150, AT1G26200, AT1G26230, AT1G26250, AT1G26380, AT1G26390, AT1G26410, AT1G26690, AT1G26810, AT1G26930, AT1G27210, AT1G27420, AT1G27480, AT1G27980, AT1G28330, AT1G28360, AT1G28370, AT1G28480, AT1G29090, AT1G29195, AT1G29240, AT1G29290, AT1G29430, AT1G29440, AT1G29450, AT1G29460, AT1G29500, AT1G29510, AT1G29640, AT1G29660, AT1G29670, AT1G29790, AT1G29910, AT1G29920, AT1G29930, AT1G29980, AT1G30040, AT1G30135, AT1G30220, AT1G30270, AT1G30280, AT1G30360, AT1G30380, AT1G30473, AT1G30520, AT1G30620, AT1G30700, AT1G30755, AT1G30760, AT1G30840, AT1G30900, AT1G30935, AT1G31010, AT1G31173, AT1G31290, AT1G31330, AT1G31540, AT1G31550, AT1G31710, AT1G31900, AT1G31950, AT1G32060, AT1G32080, AT1G32200, AT1G32210, AT1G32220, AT1G32350, AT1G32470, AT1G32540, AT1G32550, AT1G32560, AT1G32760, AT1G32860, AT1G32870, AT1G32910, AT1G32920, AT1G32940, AT1G32950, AT1G32960, AT1G32990, AT1G33030, AT1G33240, AT1G33420, AT1G33430, AT1G33440, AT1G33560, AT1G33600, AT1G33720, AT1G33730, AT1G33770, AT1G33811, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G34750, AT1G35140, AT1G35210, AT1G35230, AT1G35420, AT1G35580, AT1G35680, AT1G35710, AT1G35910, AT1G36622, AT1G42970, AT1G42980, AT1G43160, AT1G43310, AT1G43910, AT1G44130, AT1G44575, AT1G45145, AT1G45163, AT1G45545, AT1G46480, AT1G47056, AT1G47440, AT1G47510, AT1G47670, AT1G48000, AT1G48030, AT1G48315, AT1G48320, AT1G48370, AT1G48605, AT1G48870, AT1G49010, AT1G49050, AT1G49200, AT1G49230, AT1G49320, AT1G49380, AT1G49650, AT1G49730, AT1G49900, AT1G50420, AT1G50450, AT1G50560, AT1G50732, AT1G50900, AT1G51110, AT1G51130, AT1G51660, AT1G51670, AT1G51760, AT1G51780, AT1G51790, AT1G51800, AT1G51860, AT1G51890, AT1G51940, AT1G52000, AT1G52190, AT1G52200, AT1G52230, AT1G52240, AT1G52290, AT1G52315, AT1G52690, AT1G52890, AT1G53030, AT1G53100, AT1G53230, AT1G53233, AT1G53250, AT1G53300, AT1G53620, AT1G53700, AT1G53830, AT1G53920, AT1G54100, AT1G54130, AT1G54570, AT1G54730, AT1G54780, AT1G54820, AT1G55360, AT1G55370, AT1G55480, AT1G55490, AT1G55610, AT1G55670, AT1G55790, AT1G56120, AT1G56210, AT1G56240, AT1G56242, AT1G56430, AT1G56470, AT1G56500, AT1G56550, AT1G56650, AT1G56710, AT1G56720, AT1G57560, AT1G57630, AT1G57650, AT1G57943, AT1G57990, AT1G58150, AT1G58370, AT1G59590, AT1G59640, AT1G59740, AT1G59840, AT1G59950, AT1G60160, AT1G60190, AT1G60420, AT1G60550, AT1G60590, AT1G60600, AT1G60610, AT1G60690, AT1G60730, AT1G60800, AT1G60890, AT1G60950, AT1G61140, AT1G61240, AT1G61340, AT1G61420, AT1G61520, AT1G61550, AT1G61560, AT1G61795, AT1G61800, AT1G61810, AT1G61820, AT1G62300, AT1G62422, AT1G62440, AT1G62510, AT1G62570, AT1G62580, AT1G62750, AT1G62760, AT1G62975, AT1G63040, AT1G63120, AT1G63245, AT1G63400, AT1G63440, AT1G63460, AT1G63480, AT1G63720, AT1G63740, AT1G63820, AT1G63840, AT1G64150, AT1G64220, AT1G64390, AT1G64510, AT1G64610, AT1G64625, AT1G64660, AT1G64720, AT1G64770, AT1G65483, AT1G65590, AT1G65610, AT1G65690, AT1G65860, AT1G66040, AT1G66090, AT1G66100, AT1G66130, AT1G66140, AT1G66170, AT1G66180, AT1G66280, AT1G66410, AT1G66550, AT1G66570, AT1G66580, AT1G66600, AT1G66725, AT1G66810, AT1G66820, AT1G66880, AT1G66960, AT1G67000, AT1G67070, AT1G67090, AT1G67190, AT1G67195, AT1G67360, AT1G67520, AT1G67635, AT1G67650, AT1G67700, AT1G67740, AT1G67750, AT1G67800, AT1G67810, AT1G67850, AT1G67970, AT1G67980, AT1G68010, AT1G68190, AT1G68200, AT1G68390, AT1G68400, AT1G68520, AT1G68530, AT1G68560, AT1G68620, AT1G68710, AT1G68740, AT1G68810, AT1G68820, AT1G68870, AT1G68890, AT1G68940, AT1G69140, AT1G69260, AT1G69480, AT1G69490, AT1G69520, AT1G69530, AT1G69610, AT1G69720, AT1G69790, AT1G69840, AT1G69880, AT1G69930, AT1G70410, AT1G70430, AT1G70460, AT1G70480, AT1G70500, AT1G70640, AT1G70690, AT1G70760, AT1G70810, AT1G70820, AT1G70895, AT1G70940, AT1G71100, AT1G71520, AT1G71690, AT1G71697, AT1G71870, AT1G72000, AT1G72120, AT1G72125, AT1G72140, AT1G72220, AT1G72270, AT1G72310, AT1G72330, AT1G72430, AT1G72540, AT1G72600, AT1G72610, AT1G72680, AT1G72700, AT1G72770, AT1G72810, AT1G72890, AT1G72900, AT1G72910, AT1G72920, AT1G72940, AT1G72950, AT1G73010, AT1G73066, AT1G73110, AT1G73260, AT1G73325, AT1G73550, AT1G73590, AT1G73805, AT1G73810, AT1G73830, AT1G73965, AT1G74070, AT1G74080, AT1G74100, AT1G74200, AT1G74360, AT1G74370, AT1G74470, AT1G74670, AT1G74710, AT1G74730, AT1G74940, AT1G75170, AT1G75250, AT1G75388, AT1G75390, AT1G75500, AT1G75510, AT1G75690, AT1G75750, AT1G75780, AT1G75800, AT1G75830, AT1G76040, AT1G76062, AT1G76240, AT1G76470, AT1G76610, AT1G76650, AT1G76760, AT1G76970, AT1G77000, AT1G77131, AT1G77145, AT1G77210, AT1G77280, AT1G77400, AT1G77490, AT1G77500, AT1G77630, AT1G77890, AT1G77920, AT1G78020, AT1G78060, AT1G78190, AT1G78320, AT1G78340, AT1G78380, AT1G78410, AT1G78570, AT1G78820, AT1G78830, AT1G78860, AT1G78970, AT1G79400, AT1G79680, AT1G79900, AT1G80030, AT1G80080, AT1G80110, AT1G80120, AT1G80160, AT1G80300, AT1G80530, AT1G80580, AT1G80590, AT1G80630, AT1G80640, AT1G80840, AT2G01010, AT2G01340, AT2G01420, AT2G01540, AT2G01590, AT2G01630, AT2G01650, AT2G01760, AT2G02020, AT2G02060, AT2G02310, AT2G02340, AT2G02350, AT2G02390, AT2G02780, AT2G02870, AT2G02950, AT2G02980, AT2G03090, AT2G03270, AT2G03750, AT2G03760, AT2G04040, AT2G04070, AT2G04100, AT2G04400, AT2G04430, AT2G04450, AT2G04780, AT2G04900, AT2G05070, AT2G05320, AT2G05630, AT2G05790, AT2G05910, AT2G05914, AT2G05940, AT2G05995, AT2G06255, AT2G06850, AT2G07687, AT2G07688, AT2G07732, AT2G10940, AT2G13360, AT2G13790, AT2G13810, AT2G13820, AT2G13960, AT2G14290, AT2G14560, AT2G14610, AT2G14620, AT2G14880, AT2G14890, AT2G15090, AT2G15400, AT2G15440, AT2G15880, AT2G16060, AT2G16367, AT2G16530, AT2G16630, AT2G16700, AT2G16710, AT2G16720, AT2G16870, AT2G17040, AT2G17130, AT2G17220, AT2G17230, AT2G17500, AT2G17720, AT2G17740, AT2G17780, AT2G18000, AT2G18300, AT2G18560, AT2G18660, AT2G18890, AT2G19170, AT2G19190, AT2G19620, AT2G19690, AT2G19710, AT2G19800, AT2G19930, AT2G20110, AT2G20142, AT2G20180, AT2G20210, AT2G20290, AT2G20340, AT2G20680, AT2G20825, AT2G20890, AT2G21050, AT2G21140, AT2G21188, AT2G21330, AT2G21470, AT2G21510, AT2G21660, AT2G21830, AT2G21850, AT2G22200, AT2G22500, AT2G22560, AT2G22760, AT2G22770, AT2G22810, AT2G22890, AT2G22980, AT2G22990, AT2G23030, AT2G23100, AT2G23130, AT2G23170, AT2G23320, AT2G23450, AT2G23590, AT2G23600, AT2G23680, AT2G23790, AT2G23810, AT2G24040, AT2G24060, AT2G24090, AT2G24150, AT2G24170, AT2G24240, AT2G24280, AT2G24350, AT2G24580, AT2G24610, AT2G24762, AT2G24850, AT2G25130, AT2G25240, AT2G25270, AT2G25440, AT2G25470, AT2G25520, AT2G25737, AT2G25790, AT2G25840, AT2G25900, AT2G26080, AT2G26190, AT2G26250, AT2G26290, AT2G26300, AT2G26330, AT2G26400, AT2G26480, AT2G26560, AT2G26640, AT2G26710, AT2G26750, AT2G26870, AT2G26900, AT2G26910, AT2G27040, AT2G27060, AT2G27130, AT2G27190, AT2G27389, AT2G27430, AT2G27510, AT2G27690, AT2G27810, AT2G27830, AT2G27920, AT2G28000, AT2G28040, AT2G28050, AT2G28110, AT2G28160, AT2G28315, AT2G28400, AT2G28460, AT2G28790, AT2G28810, AT2G28870, AT2G28890, AT2G28930, AT2G28950, AT2G29050, AT2G29070, AT2G29110, AT2G29290, AT2G29310, AT2G29320, AT2G29350, AT2G29400, AT2G29460, AT2G29470, AT2G29480, AT2G29550, AT2G29630, AT2G29680, AT2G29720, AT2G29750, AT2G29950, AT2G29990, AT2G30080, AT2G30140, AT2G30170, AT2G30395, AT2G30400, AT2G30420, AT2G30550, AT2G30750, AT2G30770, AT2G30790, AT2G30830, AT2G31018, AT2G31020, AT2G31170, AT2G31200, AT2G31305, AT2G31390, AT2G31570, AT2G31790, AT2G31865, AT2G31870, AT2G31880, AT2G31902, AT2G32100, AT2G32130, AT2G32140, AT2G32150, AT2G32160, AT2G32179, AT2G32460, AT2G32510, AT2G32640, AT2G32660, AT2G32670, AT2G32680, AT2G33060, AT2G33330, AT2G33380, AT2G33570, AT2G33580, AT2G33735, AT2G33860, AT2G34060, AT2G34070, AT2G34170, AT2G34180, AT2G34190, AT2G34420, AT2G34430, AT2G34490, AT2G34500, AT2G34510, AT2G34600, AT2G34620, AT2G34680, AT2G34930, AT2G34940, AT2G34980, AT2G35000, AT2G35070, AT2G35130, AT2G35190, AT2G35260, AT2G35500, AT2G35550, AT2G35590, AT2G35637, AT2G35640, AT2G35730, AT2G35859, AT2G35860, AT2G35940, AT2G35950, AT2G35960, AT2G36000, AT2G36050, AT2G36110, AT2G36200, AT2G36570, AT2G36640, AT2G36830, AT2G36854, AT2G36990, AT2G37090, AT2G37110, AT2G37170, AT2G37180, AT2G37220, AT2G37440, AT2G37450, AT2G37640, AT2G37670, AT2G37760, AT2G37870, AT2G37950, AT2G37980, AT2G38050, AT2G38080, AT2G38120, AT2G38170, AT2G38210, AT2G38240, AT2G38250, AT2G38340, AT2G38460, AT2G38490, AT2G38530, AT2G38540, AT2G38860, AT2G39030, AT2G39050, AT2G39110, AT2G39130, AT2G39140, AT2G39190, AT2G39210, AT2G39230, AT2G39320, AT2G39350, AT2G39420, AT2G39430, AT2G39470, AT2G39518, AT2G39530, AT2G39700, AT2G39730, AT2G40008, AT2G40140, AT2G40330, AT2G40340, AT2G40435, AT2G40480, AT2G40540, AT2G40610, AT2G40690, AT2G40750, AT2G41070, AT2G41090, AT2G41100, AT2G41290, AT2G41380, AT2G41410, AT2G41480, AT2G41550, AT2G41660, AT2G41720, AT2G41820, AT2G42060, AT2G42290, AT2G42300, AT2G42320, AT2G42350, AT2G42380, AT2G42560, AT2G42870, AT2G42940, AT2G42950, AT2G42980, AT2G43000, AT2G43040, AT2G43100, AT2G43120, AT2G43140, AT2G43320, AT2G43360, AT2G43570, AT2G43580, AT2G43820, AT2G44180, AT2G44230, AT2G44383, AT2G44450, AT2G44740, AT2G44920, AT2G45050, AT2G45170, AT2G45180, AT2G45210, AT2G45220, AT2G45330, AT2G45340, AT2G45470, AT2G45500, AT2G45560, AT2G45570, AT2G45660, AT2G45695, AT2G45760, AT2G45770, AT2G45850, AT2G45960, AT2G46040, AT2G46250, AT2G46270, AT2G46380, AT2G46400, AT2G46430, AT2G46440, AT2G46510, AT2G46620, AT2G46630, AT2G46670, AT2G46680, AT2G46790, AT2G46820, AT2G46980, AT2G47000, AT2G47130, AT2G47140, AT2G47190, AT2G47440, AT2G47560, AT2G47590, AT2G47640, AT2G47720, AT2G47770, AT2G47840, AT2G47930, AT2G47940, AT3G01060, AT3G01080, AT3G01290, AT3G01440, AT3G01480, AT3G01490, AT3G01500, AT3G01810, AT3G01840, AT3G01970, AT3G02050, AT3G02140, AT3G02150, AT3G02160, AT3G02190, AT3G02730, AT3G02770, AT3G02800, AT3G03310, AT3G03341, AT3G03440, AT3G03450, AT3G03470, AT3G03490, AT3G03560, AT3G03610, AT3G03650, AT3G03702, AT3G03780, AT3G03820, AT3G03980, AT3G04000, AT3G04060, AT3G04070, AT3G04140, AT3G04160, AT3G04220, AT3G04420, AT3G04550, AT3G04620, AT3G05190, AT3G05330, AT3G05360, AT3G05390, AT3G05500, AT3G05620, AT3G05870, AT3G05905, AT3G06140, AT3G06160, AT3G06320, AT3G06420, AT3G06433, AT3G06490, AT3G06500, AT3G06750, AT3G06770, AT3G07010, AT3G07195, AT3G07200, AT3G07320, AT3G07370, AT3G07540, AT3G07600, AT3G07700, AT3G07720, AT3G07870, AT3G08030, AT3G08720, AT3G08760, AT3G08870, AT3G08940, AT3G08990, AT3G09270, AT3G09490, AT3G09580, AT3G09780, AT3G09800, AT3G09830, AT3G09910, AT3G09940, AT3G09960, AT3G10010, AT3G10040, AT3G10080, AT3G10150, AT3G10160, AT3G10200, AT3G10310, AT3G10320, AT3G10340, AT3G10420, AT3G10490, AT3G10500, AT3G10640, AT3G10840, AT3G11000, AT3G11010, AT3G11040, AT3G11080, AT3G11110, AT3G11330, AT3G11340, AT3G11480, AT3G11580, AT3G11700, AT3G11820, AT3G11840, AT3G12040, AT3G12110, AT3G12220, AT3G12230, AT3G12320, AT3G12520, AT3G12610, AT3G12760, AT3G12780, AT3G12830, AT3G13000, AT3G13065, AT3G13080, AT3G13090, AT3G13100, AT3G13120, AT3G13180, AT3G13235, AT3G13380, AT3G13430, AT3G13470, AT3G13510, AT3G13610, AT3G13730, AT3G13750, AT3G13782, AT3G13900, AT3G13950, AT3G14050, AT3G14130, AT3G14210, AT3G14240, AT3G14310, AT3G14330, AT3G14350, AT3G14415, AT3G14420, AT3G14430, AT3G14440, AT3G14470, AT3G14475, AT3G14590, AT3G14610, AT3G14680, AT3G14700, AT3G14840, AT3G15030, AT3G15354, AT3G15355, AT3G15500, AT3G15530, AT3G15536, AT3G15570, AT3G15680, AT3G15720, AT3G15770, AT3G15800, AT3G15850, AT3G16150, AT3G16180, AT3G16240, AT3G16250, AT3G16370, AT3G16520, AT3G16530, AT3G16565, AT3G16850, AT3G16980, AT3G16990, AT3G17000, AT3G17350, AT3G17380, AT3G17420, AT3G17609, AT3G17640, AT3G17690, AT3G17790, AT3G17800, AT3G17810, AT3G17820, AT3G17830, AT3G18080, AT3G18090, AT3G18110, AT3G18260, AT3G18560, AT3G18670, AT3G18710, AT3G18773, AT3G18850, AT3G18890, AT3G19002, AT3G19010, AT3G19120, AT3G19270, AT3G19390, AT3G19480, AT3G19580, AT3G19710, AT3G19850, AT3G19910, AT3G20015, AT3G20260, AT3G20340, AT3G20350, AT3G20640, AT3G20760, AT3G20810, AT3G20820, AT3G21150, AT3G21230, AT3G21260, AT3G21460, AT3G21520, AT3G21700, AT3G21870, AT3G22120, AT3G22121, AT3G22142, AT3G22150, AT3G22370, AT3G22400, AT3G22560, AT3G22600, AT3G22790, AT3G22810, AT3G22840, AT3G22910, AT3G22961, AT3G23120, AT3G23240, AT3G23700, AT3G23730, AT3G23810, AT3G24320, AT3G24400, AT3G24430, AT3G24460, AT3G24480, AT3G25010, AT3G25020, AT3G25250, AT3G25290, AT3G25400, AT3G25410, AT3G25500, AT3G25510, AT3G25700, AT3G25882, AT3G25920, AT3G26060, AT3G26090, AT3G26210, AT3G26220, AT3G26240, AT3G26310, AT3G26320, AT3G26440, AT3G26445, AT3G26460, AT3G26510, AT3G26520, AT3G26570, AT3G26650, AT3G26690, AT3G26830, AT3G26840, AT3G27210, AT3G27290, AT3G27660, AT3G27810, AT3G27850, AT3G28007, AT3G28040, AT3G28070, AT3G28080, AT3G28130, AT3G28200, AT3G28210, AT3G28340, AT3G28480, AT3G28510, AT3G28540, AT3G28570, AT3G28580, AT3G28600, AT3G28850, AT3G28860, AT3G28890, AT3G28930, AT3G29185, AT3G29250, AT3G29320, AT3G29575, AT3G29670, AT3G30720, AT3G30775, AT3G41768, AT3G42670, AT3G43790, AT3G44300, AT3G44326, AT3G44350, AT3G44400, AT3G44490, AT3G44717, AT3G44720, AT3G44830, AT3G44860, AT3G44990, AT3G45010, AT3G45130, AT3G45410, AT3G45420, AT3G45430, AT3G45638, AT3G45940, AT3G46080, AT3G46090, AT3G46130, AT3G46280, AT3G46370, AT3G46510, AT3G46550, AT3G46580, AT3G46658, AT3G46660, AT3G46690, AT3G46780, AT3G46900, AT3G46930, AT3G46970, AT3G47090, AT3G47340, AT3G47400, AT3G47490, AT3G47540, AT3G47780, AT3G48080, AT3G48090, AT3G48240, AT3G48390, AT3G48420, AT3G48460, AT3G48520, AT3G48570, AT3G48580, AT3G48610, AT3G48650, AT3G48700, AT3G48720, AT3G48850, AT3G49110, AT3G49120, AT3G49130, AT3G49540, AT3G49580, AT3G49670, AT3G49740, AT3G50120, AT3G50220, AT3G50240, AT3G50260, AT3G50280, AT3G50310, AT3G50470, AT3G50480, AT3G50760, AT3G50790, AT3G50800, AT3G50820, AT3G50840, AT3G50890, AT3G51080, AT3G51150, AT3G51330, AT3G51420, AT3G51430, AT3G51440, AT3G51470, AT3G51480, AT3G51660, AT3G51670, AT3G51820, AT3G51860, AT3G51890, AT3G51910, AT3G52115, AT3G52150, AT3G52310, AT3G52370, AT3G52400, AT3G52430, AT3G52460, AT3G52470, AT3G52540, AT3G52630, AT3G52670, AT3G52720, AT3G52740, AT3G52742, AT3G52748, AT3G52770, AT3G52940, AT3G52960, AT3G53120, AT3G53130, AT3G53140, AT3G53150, AT3G53190, AT3G53230, AT3G53232, AT3G53420, AT3G53460, AT3G53650, AT3G53800, AT3G54050, AT3G54150, AT3G54270, AT3G54320, AT3G54400, AT3G54600, AT3G54690, AT3G54830, AT3G54880, AT3G54920, AT3G54950, AT3G55330, AT3G55630, AT3G55640, AT3G55700, AT3G55730, AT3G55800, AT3G55880, AT3G55950, AT3G56160, AT3G56170, AT3G56275, AT3G56370, AT3G56400, AT3G56650, AT3G56710, AT3G56891, AT3G56940, AT3G57010, AT3G57090, AT3G57180, AT3G57380, AT3G57460, AT3G57520, AT3G57550, AT3G57830, AT3G57880, AT3G58120, AT3G58600, AT3G58620, AT3G59100, AT3G59400, AT3G59570, AT3G59700, AT3G59890, AT3G59900, AT3G60070, AT3G60110, AT3G60160, AT3G60164, AT3G60180, AT3G60320, AT3G60370, AT3G60420, AT3G60470, AT3G60530, AT3G60540, AT3G60630, AT3G60750, AT3G60961, AT3G61113, AT3G61160, AT3G61185, AT3G61190, AT3G61198, AT3G61280, AT3G61390, AT3G61450, AT3G61470, AT3G61490, AT3G61750, AT3G61760, AT3G61820, AT3G61890, AT3G61930, AT3G61950, AT3G62020, AT3G62550, AT3G62590, AT3G62690, AT3G62740, AT3G62750, AT3G62760, AT3G62780, AT3G62910, AT3G62960, AT3G63010, AT3G63030, AT3G63060, AT3G63110, AT3G63140, AT3G63170, AT3G63380, AT3G63410, AT3G63510, AT4G00165, AT4G00240, AT4G00370, AT4G00400, AT4G00550, AT4G00950, AT4G01010, AT4G01130, AT4G01310, AT4G01330, AT4G01360, AT4G01430, AT4G01440, AT4G01460, AT4G01540, AT4G01895, AT4G02220, AT4G02290, AT4G02330, AT4G02380, AT4G02520, AT4G02550, AT4G02630, AT4G02660, AT4G02770, AT4G03010, AT4G03060, AT4G03140, AT4G03190, AT4G03210, AT4G03280, AT4G03320, AT4G03450, AT4G04330, AT4G04340, AT4G04350, AT4G04450, AT4G04490, AT4G04540, AT4G04620, AT4G04695, AT4G04810, AT4G04910, AT4G05020, AT4G05030, AT4G05100, AT4G05497, AT4G07400, AT4G07960, AT4G08290, AT4G08770, AT4G09010, AT4G09160, AT4G09420, AT4G09460, AT4G09570, AT4G09650, AT4G09750, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10955, AT4G10960, AT4G11070, AT4G11140, AT4G11170, AT4G11290, AT4G11655, AT4G11690, AT4G11840, AT4G11850, AT4G11890, AT4G11910, AT4G12030, AT4G12120, AT4G12310, AT4G12320, AT4G12330, AT4G12390, AT4G12410, AT4G12420, AT4G12480, AT4G12720, AT4G12730, AT4G12800, AT4G12830, AT4G12850, 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AT4G29240, AT4G29360, AT4G29610, AT4G29740, AT4G29810, AT4G29930, AT4G29950, AT4G30020, AT4G30250, AT4G30290, AT4G30410, AT4G30430, AT4G30520, AT4G30610, AT4G30640, AT4G30680, AT4G31000, AT4G31060, AT4G31230, AT4G31290, AT4G31330, AT4G31800, AT4G31820, AT4G31850, AT4G31860, AT4G31870, AT4G31890, AT4G32280, AT4G32340, AT4G32780, AT4G32785, AT4G32870, AT4G32880, AT4G32980, AT4G33000, AT4G33010, AT4G33050, AT4G33150, AT4G33220, AT4G33260, AT4G33300, AT4G33355, AT4G33467, AT4G33470, AT4G33660, AT4G33925, AT4G33970, AT4G34060, AT4G34120, AT4G34131, AT4G34200, AT4G34220, AT4G34290, AT4G34390, AT4G34760, AT4G34770, AT4G34830, AT4G34860, AT4G34900, AT4G34970, AT4G34980, AT4G35090, AT4G35110, AT4G35180, AT4G35250, AT4G35290, AT4G35420, AT4G35440, AT4G35500, AT4G35590, AT4G35600, AT4G35640, AT4G35840, AT4G36090, AT4G36110, AT4G36150, AT4G36180, AT4G36190, AT4G36380, AT4G36410, AT4G36540, AT4G36710, AT4G36820, AT4G36900, AT4G36950, AT4G36988, AT4G36990, AT4G37010, AT4G37150, AT4G37180, AT4G37240, AT4G37330, AT4G37370, AT4G37390, AT4G37450, AT4G37550, AT4G37553, AT4G37610, AT4G37690, AT4G37800, AT4G37850, AT4G37900, AT4G37925, AT4G37930, AT4G37990, AT4G38000, AT4G38160, AT4G38400, AT4G38430, AT4G38560, AT4G38660, AT4G38670, AT4G38700, AT4G38770, AT4G38840, AT4G38860, AT4G38970, AT4G39020, AT4G39030, AT4G39350, AT4G39404, AT4G39610, AT4G39670, AT4G39710, AT4G39740, AT4G39770, AT4G39780, AT4G39830, AT4G39890, AT4G40020, AT4G40042, AT5G01050, AT5G01075, AT5G01100, AT5G01210, AT5G01215, AT5G01240, AT5G01250, AT5G01380, AT5G01490, AT5G01530, AT5G01550, AT5G01640, AT5G01730, AT5G01820, AT5G01850, AT5G01900, AT5G01920, AT5G01930, AT5G02020, AT5G02100, AT5G02170, AT5G02180, AT5G02320, AT5G02490, AT5G02520, AT5G02540, AT5G02570, AT5G02590, AT5G02600, AT5G02760, AT5G02780, AT5G02890, AT5G02940, AT5G03150, AT5G03170, AT5G03210, AT5G03270, AT5G03350, AT5G03610, AT5G03890, AT5G04160, AT5G04180, AT5G04190, AT5G04230, AT5G04250, AT5G04360, AT5G04530, AT5G04720, AT5G04810, AT5G04900, AT5G04950, 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AT5G16350, AT5G16360, AT5G16390, AT5G16400, AT5G16450, AT5G16530, AT5G16540, AT5G16590, AT5G16600, AT5G16715, AT5G16810, AT5G16880, AT5G17060, AT5G17330, AT5G17390, AT5G17450, AT5G17520, AT5G17640, AT5G17670, AT5G17760, AT5G17780, AT5G18030, AT5G18080, AT5G18270, AT5G18570, AT5G18660, AT5G18670, AT5G18780, AT5G19440, AT5G19450, AT5G19780, AT5G19810, AT5G19930, AT5G20000, AT5G20230, AT5G20270, AT5G20400, AT5G20635, AT5G20740, AT5G20830, AT5G20870, AT5G20910, AT5G20960, AT5G21100, AT5G21222, AT5G21430, AT5G21920, AT5G21930, AT5G22060, AT5G22300, AT5G22380, AT5G22460, AT5G22570, AT5G22630, AT5G22640, AT5G22800, AT5G23010, AT5G23060, AT5G23170, AT5G23210, AT5G23540, AT5G23580, AT5G23870, AT5G23980, AT5G24000, AT5G24010, AT5G24090, AT5G24140, AT5G24200, AT5G24205, AT5G24206, AT5G24210, AT5G24300, AT5G24490, AT5G24530, AT5G24540, AT5G24750, AT5G24910, AT5G24920, AT5G25130, AT5G25140, AT5G25190, AT5G25250, AT5G25440, AT5G25450, AT5G25451, AT5G25460, AT5G25590, AT5G25820, AT5G25830, AT5G25910, AT5G25930, AT5G26010, AT5G26170, AT5G26220, AT5G26260, AT5G26330, AT5G26340, AT5G26622, AT5G26670, AT5G26690, AT5G26700, AT5G26820, AT5G26920, AT5G27000, AT5G27060, AT5G27360, AT5G27390, AT5G27420, AT5G27520, AT5G27610, AT5G27660, AT5G27830, AT5G27920, AT5G28020, AT5G28050, AT5G28237, AT5G28450, AT5G28646, AT5G33280, AT5G34780, AT5G34795, AT5G35170, AT5G35200, AT5G35520, AT5G35580, AT5G35630, AT5G35680, AT5G35750, AT5G35790, AT5G36920, AT5G37600, AT5G37660, AT5G37740, AT5G38030, AT5G38280, AT5G38410, AT5G38420, AT5G38430, AT5G38510, AT5G38520, AT5G38710, AT5G38895, AT5G38900, AT5G39040, AT5G39050, AT5G39090, AT5G39210, AT5G39610, AT5G39660, AT5G39680, AT5G39785, AT5G39950, AT5G40010, AT5G40150, AT5G40210, AT5G40240, AT5G40330, AT5G40348, AT5G40380, AT5G40460, AT5G40610, AT5G40690, AT5G40880, AT5G40890, AT5G41080, AT5G41160, AT5G41180, AT5G41315, AT5G41550, AT5G41560, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41750, AT5G41920, AT5G42010, AT5G42050, AT5G42100, AT5G42200, AT5G42240, AT5G42250, AT5G42380, AT5G42830, AT5G43150, AT5G43580, AT5G43650, AT5G43750, AT5G43860, AT5G43870, AT5G43890, AT5G43910, AT5G44020, AT5G44050, AT5G44130, AT5G44160, AT5G44190, AT5G44260, AT5G44460, AT5G44480, AT5G44530, AT5G44570, AT5G44600, AT5G44680, AT5G45000, AT5G45070, AT5G45080, AT5G45090, AT5G45100, AT5G45110, AT5G45310, AT5G45340, AT5G45370, AT5G45440, AT5G45475, AT5G45490, AT5G45510, AT5G45630, AT5G45650, AT5G45670, AT5G45770, AT5G45830, AT5G45840, AT5G45930, AT5G46110, AT5G46180, AT5G46220, AT5G46290, AT5G46350, AT5G46520, AT5G46570, AT5G46600, AT5G46690, AT5G46700, AT5G46870, AT5G47050, AT5G47070, AT5G47120, AT5G47130, AT5G47140, AT5G47200, AT5G47440, AT5G47500, AT5G47550, AT5G47730, AT5G47740, AT5G48180, AT5G48290, AT5G48320, AT5G48360, AT5G48400, AT5G48410, AT5G48545, AT5G48820, AT5G48900, AT5G48910, AT5G49020, AT5G49215, AT5G49390, AT5G49570, AT5G49680, AT5G49690, AT5G49700, AT5G49730, AT5G49740, AT5G50090, AT5G50350, AT5G50380, AT5G50450, AT5G50760, AT5G51060, AT5G51070, AT5G51380, AT5G51460, AT5G51480, AT5G51550, AT5G51560, AT5G51630, AT5G51640, AT5G51720, AT5G51740, AT5G51820, AT5G51830, AT5G52100, AT5G52110, AT5G52190, AT5G52300, AT5G52570, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52770, AT5G52800, AT5G52820, AT5G52990, AT5G53120, AT5G53144, AT5G53290, AT5G53360, AT5G53588, AT5G53590, AT5G53860, AT5G53900, AT5G53970, AT5G54040, AT5G54070, AT5G54075, AT5G54180, AT5G54190, AT5G54270, AT5G54470, AT5G54490, AT5G54610, AT5G54650, AT5G54770, AT5G54840, AT5G54860, AT5G54940, AT5G54980, AT5G55090, AT5G55170, AT5G55220, AT5G55380, AT5G55400, AT5G55410, AT5G55450, AT5G55460, AT5G55480, AT5G55740, AT5G55850, AT5G56040, AT5G56100, AT5G56340, AT5G56590, AT5G56850, AT5G56890, AT5G56970, AT5G57050, AT5G57100, AT5G57150, AT5G57170, AT5G57260, AT5G57500, AT5G57510, AT5G57780, AT5G57785, AT5G57900, AT5G57910, AT5G58140, AT5G58160, AT5G58260, AT5G58300, AT5G58310, AT5G58330, AT5G58390, AT5G58480, AT5G58600, AT5G58620, AT5G58840, AT5G59130, AT5G59140, AT5G59220, AT5G59250, AT5G59490, AT5G59530, AT5G59580, AT5G59590, AT5G59680, AT5G59750, AT5G59890, AT5G60280, AT5G60490, AT5G60530, AT5G60660, AT5G60730, AT5G60800, AT5G60900, AT5G60910, AT5G61010, AT5G61070, AT5G61130, AT5G61160, AT5G61190, AT5G61210, AT5G61250, AT5G61350, AT5G61390, AT5G61420, AT5G61430, AT5G61530, AT5G61560, AT5G61590, AT5G61900, AT5G62020, AT5G62150, AT5G62180, AT5G62350, AT5G62360, AT5G62480, AT5G62670, AT5G62730, AT5G62820, AT5G62840, AT5G62890, AT5G63130, AT5G63135, AT5G63180, AT5G63650, AT5G63810, AT5G63880, AT5G63905, AT5G63990, AT5G64040, AT5G64120, AT5G64280, AT5G64370, AT5G64380, AT5G64530, AT5G64640, AT5G64800, AT5G64810, AT5G64890, AT5G64990, AT5G65010, AT5G65090, AT5G65280, AT5G65390, AT5G65410, AT5G65700, AT5G65730, AT5G66170, AT5G66330, AT5G66520, AT5G66570, AT5G66580, AT5G66770, AT5G66890, AT5G66910, AT5G66920, AT5G67080, AT5G67310, AT5G67340, AT5G67360, AT5G67385, AT5G67450, AT5G67600, ATCG00010, ATCG00020, ATCG00040, ATCG00065, ATCG00070, ATCG00080, ATCG00100, ATCG00120, ATCG00130, ATCG00140, ATCG00150, ATCG00160, ATCG00210, ATCG00220, ATCG00270, ATCG00280, ATCG00290, ATCG00300, ATCG00330, ATCG00340, ATCG00350, ATCG00360, ATCG00380, ATCG00400, ATCG00440, ATCG00450, ATCG00490, ATCG00500, ATCG00510, ATCG00520, ATCG00550, ATCG00560, ATCG00570, ATCG00580, ATCG00590, ATCG00600, ATCG00630, ATCG00650, ATCG00680, ATCG00690, ATCG00710, ATCG00720, ATCG00730, ATCG00890, ATCG00900, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG01000, ATCG01010, ATCG01050, ATCG01060, ATCG01070, ATCG01080, ATCG01090, ATCG01100, ATCG01130, ATCG01150, ATCG01180, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00060, ATMG00280, ATMG01380, ATMG01390
## 61 NA
## 62 NA
## 63 AT1G01010, AT1G01070, AT1G01120, AT1G01190, AT1G01200, AT1G01300, AT1G01340, AT1G01370, AT1G01430, AT1G01480, AT1G01520, AT1G01560, AT1G01590, AT1G01610, AT1G01620, AT1G01680, AT1G01690, AT1G02220, AT1G02230, AT1G02310, AT1G02390, AT1G02405, AT1G02450, AT1G02470, AT1G02520, AT1G02640, AT1G02650, AT1G02660, AT1G02700, AT1G02710, AT1G02750, AT1G03050, AT1G03180, AT1G03210, AT1G03290, AT1G03300, AT1G03340, AT1G03400, AT1G03495, AT1G03600, AT1G03630, AT1G03660, AT1G03680, AT1G03850, AT1G03870, AT1G03990, AT1G04040, AT1G04160, AT1G04310, AT1G04360, AT1G04420, AT1G04490, AT1G04500, AT1G04570, AT1G04600, AT1G04780, AT1G05000, AT1G05100, AT1G05170, AT1G05310, AT1G05340, AT1G05420, AT1G05570, AT1G05680, AT1G05835, AT1G05880, AT1G06160, AT1G06180, AT1G06240, AT1G06250, AT1G06260, AT1G06265, AT1G06460, AT1G06620, AT1G06660, AT1G06680, AT1G06850, AT1G07000, AT1G07020, AT1G07110, AT1G07320, AT1G07430, AT1G07440, AT1G07476, AT1G07490, AT1G07500, AT1G07590, AT1G07600, AT1G07610, AT1G07620, AT1G07630, AT1G07880, AT1G08050, AT1G08090, AT1G08160, AT1G08300, AT1G08630, AT1G08810, AT1G08860, AT1G08920, AT1G08940, AT1G09090, AT1G09240, AT1G09340, AT1G09350, AT1G09440, AT1G09500, AT1G09560, AT1G09630, AT1G09750, AT1G09794, AT1G09930, AT1G09932, AT1G10070, AT1G10140, AT1G10340, AT1G10380, AT1G10410, AT1G10417, AT1G10520, AT1G10585, AT1G10657, AT1G10690, AT1G10710, AT1G10910, AT1G10960, AT1G11000, AT1G11100, AT1G11130, AT1G11330, AT1G11362, AT1G11400, AT1G11480, AT1G11545, AT1G11670, AT1G11720, AT1G11785, AT1G11860, AT1G11905, AT1G11925, AT1G12060, AT1G12090, AT1G12250, AT1G12320, AT1G12500, AT1G12540, AT1G12730, AT1G12860, AT1G12900, AT1G13150, AT1G13250, AT1G13330, AT1G13340, AT1G13380, AT1G13420, AT1G13470, AT1G13550, AT1G13650, AT1G13790, AT1G13990, AT1G14030, AT1G14150, AT1G14160, AT1G14180, AT1G14185, AT1G14260, AT1G14270, AT1G14330, AT1G14345, AT1G14440, AT1G14540, AT1G14687, AT1G14700, AT1G14720, AT1G14870, AT1G14880, AT1G14900, AT1G15000, AT1G15010, AT1G15080, AT1G15125, AT1G15160, AT1G15180, AT1G15260, AT1G15290, AT1G15380, AT1G15405, AT1G15415, AT1G15510, AT1G15520, AT1G15550, AT1G15670, AT1G15690, AT1G15790, AT1G15800, AT1G15820, AT1G15980, AT1G15990, AT1G16080, AT1G16150, AT1G16300, AT1G16410, AT1G16420, AT1G16500, AT1G16670, AT1G16720, AT1G17020, AT1G17100, AT1G17200, AT1G17380, AT1G17490, AT1G17500, AT1G17600, AT1G17615, AT1G17650, AT1G17745, AT1G17750, AT1G17850, AT1G18000, AT1G18010, AT1G18250, AT1G18415, AT1G18420, AT1G18570, AT1G18620, AT1G18650, AT1G18735, AT1G18890, AT1G19150, AT1G19160, AT1G19180, AT1G19200, AT1G19220, AT1G19230, AT1G19250, AT1G19270, AT1G19350, AT1G19450, AT1G19490, AT1G19640, AT1G20010, AT1G20020, AT1G20190, AT1G20310, AT1G20340, AT1G20470, AT1G20740, AT1G20780, AT1G20823, AT1G21000, AT1G21100, AT1G21200, AT1G21210, AT1G21240, AT1G21250, AT1G21370, AT1G21390, AT1G21400, AT1G21500, AT1G21520, AT1G21525, AT1G21680, AT1G21740, AT1G21880, AT1G21910, AT1G21930, AT1G22180, AT1G22220, AT1G22280, AT1G22330, AT1G22370, AT1G22400, AT1G22403, AT1G22410, AT1G22480, AT1G22510, AT1G22550, AT1G22590, AT1G22840, AT1G22850, AT1G22985, AT1G23040, AT1G23050, AT1G23052, AT1G23080, AT1G23200, AT1G23205, AT1G23340, AT1G23470, AT1G23480, AT1G23530, AT1G23550, AT1G23560, AT1G23740, AT1G23840, AT1G23850, AT1G23935, AT1G23940, AT1G24140, AT1G24145, AT1G24147, AT1G24150, AT1G24577, AT1G25240, AT1G25400, AT1G25450, AT1G26130, AT1G26150, AT1G26200, AT1G26230, AT1G26250, AT1G26290, AT1G26330, AT1G26380, AT1G26390, AT1G26410, AT1G26690, AT1G26761, AT1G26762, AT1G26810, AT1G26930, AT1G27020, AT1G27210, AT1G27300, AT1G27420, AT1G27460, AT1G27480, AT1G27980, AT1G28190, AT1G28330, AT1G28360, AT1G28370, AT1G28480, AT1G29090, AT1G29195, AT1G29240, AT1G29290, AT1G29430, AT1G29440, AT1G29450, AT1G29460, AT1G29500, AT1G29510, AT1G29600, AT1G29640, AT1G29660, AT1G29670, AT1G29680, AT1G29790, AT1G29910, AT1G29920, AT1G29930, AT1G29980, AT1G30020, AT1G30040, AT1G30135, AT1G30220, AT1G30270, AT1G30280, AT1G30360, AT1G30380, AT1G30473, AT1G30520, AT1G30620, AT1G30700, AT1G30755, AT1G30760, AT1G30814, AT1G30840, AT1G30850, AT1G30900, AT1G30935, AT1G31010, AT1G31173, AT1G31290, AT1G31330, AT1G31540, AT1G31550, AT1G31710, AT1G31835, AT1G31900, AT1G31950, AT1G32060, AT1G32080, AT1G32200, AT1G32210, AT1G32220, AT1G32350, AT1G32470, AT1G32540, AT1G32550, AT1G32560, AT1G32760, AT1G32860, AT1G32870, AT1G32910, AT1G32920, AT1G32940, AT1G32950, AT1G32960, AT1G32990, AT1G33030, AT1G33240, AT1G33420, AT1G33430, AT1G33440, AT1G33560, AT1G33600, AT1G33720, AT1G33730, AT1G33770, AT1G33811, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G34750, AT1G35140, AT1G35210, AT1G35230, AT1G35420, AT1G35580, AT1G35680, AT1G35710, AT1G35910, AT1G36622, AT1G36675, AT1G42970, AT1G42980, AT1G43160, AT1G43310, AT1G43910, AT1G44130, AT1G44575, AT1G45145, AT1G45163, AT1G45165, AT1G45545, AT1G46480, AT1G47056, AT1G47440, AT1G47510, AT1G47670, AT1G48000, AT1G48030, AT1G48315, AT1G48320, AT1G48370, AT1G48605, AT1G48870, AT1G49010, AT1G49050, AT1G49200, AT1G49230, AT1G49320, AT1G49380, AT1G49450, AT1G49650, AT1G49730, AT1G49900, AT1G50420, AT1G50450, AT1G50560, AT1G50732, AT1G50740, AT1G50900, AT1G51080, AT1G51110, AT1G51130, AT1G51660, AT1G51670, AT1G51760, AT1G51780, AT1G51790, AT1G51800, AT1G51860, AT1G51890, AT1G51940, AT1G52000, AT1G52190, AT1G52200, AT1G52230, AT1G52240, AT1G52290, AT1G52315, AT1G52565, AT1G52690, AT1G52855, AT1G52890, AT1G53030, AT1G53100, AT1G53230, AT1G53233, AT1G53250, AT1G53300, AT1G53620, AT1G53700, AT1G53830, AT1G53920, AT1G54100, AT1G54130, AT1G54570, AT1G54575, AT1G54730, AT1G54740, AT1G54780, AT1G54820, AT1G54890, AT1G55360, AT1G55370, AT1G55480, AT1G55490, AT1G55610, AT1G55670, AT1G55790, AT1G56120, AT1G56210, AT1G56240, AT1G56242, AT1G56430, AT1G56470, AT1G56500, AT1G56550, AT1G56650, AT1G56660, AT1G56710, AT1G56720, AT1G57560, AT1G57630, AT1G57650, AT1G57943, AT1G57990, AT1G58370, AT1G59590, AT1G59640, AT1G59740, AT1G59840, AT1G59950, AT1G60000, AT1G60160, AT1G60190, AT1G60390, AT1G60420, AT1G60550, AT1G60590, AT1G60600, AT1G60610, AT1G60690, AT1G60700, AT1G60730, AT1G60800, AT1G60890, AT1G60950, AT1G61065, AT1G61140, AT1G61160, AT1G61215, AT1G61240, AT1G61260, AT1G61340, AT1G61415, AT1G61420, AT1G61520, AT1G61550, AT1G61560, AT1G61795, AT1G61800, AT1G61810, AT1G61820, AT1G62300, AT1G62422, AT1G62440, AT1G62510, AT1G62520, AT1G62570, AT1G62580, AT1G62750, AT1G62760, AT1G62975, AT1G63040, AT1G63120, AT1G63245, AT1G63400, AT1G63440, AT1G63460, AT1G63480, AT1G63720, AT1G63740, AT1G63820, AT1G63840, AT1G64065, AT1G64150, AT1G64220, AT1G64390, AT1G64510, AT1G64610, AT1G64625, AT1G64660, AT1G64680, AT1G64720, AT1G64770, AT1G65230, AT1G65483, AT1G65490, AT1G65590, AT1G65610, AT1G65690, AT1G65860, AT1G65900, AT1G66040, AT1G66090, AT1G66100, AT1G66130, AT1G66140, AT1G66170, AT1G66180, AT1G66280, AT1G66410, AT1G66550, AT1G66570, AT1G66580, AT1G66590, AT1G66600, AT1G66725, AT1G66810, AT1G66880, AT1G66960, AT1G67000, AT1G67040, AT1G67060, AT1G67070, AT1G67090, AT1G67190, AT1G67195, AT1G67360, AT1G67520, AT1G67590, AT1G67650, AT1G67700, AT1G67740, AT1G67750, AT1G67800, AT1G67810, AT1G67850, AT1G67856, AT1G67970, AT1G67980, AT1G68010, AT1G68190, AT1G68200, AT1G68238, AT1G68250, AT1G68390, AT1G68400, AT1G68440, AT1G68520, AT1G68530, AT1G68560, AT1G68620, AT1G68700, AT1G68710, AT1G68740, AT1G68810, AT1G68820, AT1G68870, AT1G68890, AT1G68935, AT1G68940, AT1G69050, AT1G69140, AT1G69260, AT1G69480, AT1G69490, AT1G69520, AT1G69530, AT1G69610, AT1G69720, AT1G69790, AT1G69840, AT1G69880, AT1G69930, AT1G70220, AT1G70280, AT1G70370, AT1G70410, AT1G70430, AT1G70460, AT1G70480, AT1G70500, AT1G70640, AT1G70690, AT1G70760, AT1G70810, AT1G70820, AT1G70895, AT1G70940, AT1G71100, AT1G71520, AT1G71690, AT1G71697, AT1G71870, AT1G71910, AT1G72000, AT1G72120, AT1G72125, AT1G72140, AT1G72220, AT1G72240, AT1G72270, AT1G72310, AT1G72330, AT1G72420, AT1G72430, AT1G72540, AT1G72600, AT1G72610, AT1G72645, AT1G72680, AT1G72690, AT1G72700, AT1G72770, AT1G72810, AT1G72890, AT1G72900, AT1G72910, AT1G72920, AT1G72940, AT1G72950, AT1G73010, AT1G73066, AT1G73110, AT1G73260, AT1G73325, AT1G73550, AT1G73590, AT1G73805, AT1G73810, AT1G73830, AT1G73965, AT1G74070, AT1G74080, AT1G74100, AT1G74200, AT1G74360, AT1G74370, AT1G74470, AT1G74670, AT1G74710, AT1G74730, AT1G74875, AT1G74940, AT1G75170, AT1G75250, AT1G75360, AT1G75388, AT1G75390, AT1G75500, AT1G75510, AT1G75550, AT1G75690, AT1G75750, AT1G75780, AT1G75800, AT1G75830, AT1G76040, AT1G76062, AT1G76070, AT1G76240, AT1G76470, AT1G76590, AT1G76610, AT1G76650, AT1G76760, AT1G76970, AT1G76980, AT1G77000, AT1G77131, AT1G77145, AT1G77210, AT1G77280, AT1G77400, AT1G77490, AT1G77500, AT1G77630, AT1G77765, AT1G77890, AT1G77920, AT1G78020, AT1G78060, AT1G78190, AT1G78260, AT1G78320, AT1G78340, AT1G78380, AT1G78410, AT1G78450, AT1G78460, AT1G78570, AT1G78780, AT1G78820, AT1G78830, AT1G78860, AT1G78970, AT1G78995, AT1G79060, AT1G79400, AT1G79450, AT1G79680, AT1G79760, AT1G79770, AT1G79900, AT1G80030, AT1G80080, AT1G80110, AT1G80120, AT1G80160, AT1G80300, AT1G80450, 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AT3G48640, AT3G48650, AT3G48700, AT3G48720, AT3G48770, AT3G48850, AT3G49110, AT3G49120, AT3G49130, AT3G49260, AT3G49290, AT3G49540, AT3G49580, AT3G49670, AT3G49740, AT3G50120, AT3G50220, AT3G50240, AT3G50260, AT3G50280, AT3G50310, AT3G50470, AT3G50480, AT3G50550, AT3G50685, AT3G50760, AT3G50770, AT3G50790, AT3G50820, AT3G50840, AT3G50890, AT3G50900, AT3G50910, AT3G51080, AT3G51090, AT3G51150, AT3G51250, AT3G51330, AT3G51420, AT3G51430, AT3G51440, AT3G51470, AT3G51480, AT3G51510, AT3G51660, AT3G51670, AT3G51750, AT3G51820, AT3G51860, AT3G51890, AT3G51910, AT3G52110, AT3G52115, AT3G52150, AT3G52310, AT3G52370, AT3G52400, AT3G52430, AT3G52460, AT3G52470, AT3G52540, AT3G52630, AT3G52670, AT3G52720, AT3G52740, AT3G52742, AT3G52748, AT3G52770, AT3G52870, AT3G52940, AT3G52960, AT3G53120, AT3G53130, AT3G53140, AT3G53150, AT3G53190, AT3G53230, AT3G53420, AT3G53460, AT3G53650, AT3G53800, AT3G53950, AT3G54050, AT3G54150, AT3G54270, AT3G54320, AT3G54400, AT3G54600, AT3G54690, AT3G54830, AT3G54880, AT3G54910, AT3G54920, AT3G54950, AT3G55330, AT3G55470, AT3G55630, AT3G55640, AT3G55700, AT3G55730, AT3G55800, AT3G55880, AT3G55950, AT3G56160, AT3G56170, AT3G56275, AT3G56370, AT3G56400, AT3G56500, AT3G56650, AT3G56710, AT3G56870, AT3G56891, AT3G56940, AT3G57010, AT3G57090, AT3G57180, AT3G57380, AT3G57450, AT3G57480, AT3G57520, AT3G57550, AT3G57830, AT3G57880, AT3G57950, AT3G58120, AT3G58600, AT3G58620, AT3G58820, AT3G59100, AT3G59400, AT3G59570, AT3G59700, AT3G59780, AT3G59890, AT3G59900, AT3G60070, AT3G60110, AT3G60160, AT3G60164, AT3G60180, AT3G60320, AT3G60370, AT3G60420, AT3G60450, AT3G60470, AT3G60530, AT3G60540, AT3G60630, AT3G60750, AT3G60961, AT3G60966, AT3G61113, AT3G61160, AT3G61185, AT3G61190, AT3G61198, AT3G61280, AT3G61390, AT3G61450, AT3G61470, AT3G61490, AT3G61750, AT3G61760, AT3G61820, AT3G61870, AT3G61890, AT3G61930, AT3G61950, AT3G62020, AT3G62550, AT3G62590, AT3G62690, AT3G62740, AT3G62750, AT3G62760, AT3G62780, AT3G62910, AT3G62960, AT3G63010, AT3G63030, AT3G63060, AT3G63110, AT3G63140, AT3G63160, AT3G63170, AT3G63380, AT3G63410, AT3G63510, AT4G00165, AT4G00234, AT4G00240, AT4G00370, AT4G00400, AT4G00550, AT4G00700, AT4G00950, AT4G01010, AT4G01130, AT4G01310, AT4G01330, AT4G01360, AT4G01430, AT4G01440, AT4G01460, AT4G01535, AT4G01540, AT4G01670, AT4G01895, AT4G02220, AT4G02290, AT4G02330, AT4G02380, AT4G02520, AT4G02550, AT4G02630, AT4G02660, AT4G02730, AT4G02770, AT4G02880, AT4G03010, AT4G03060, AT4G03190, AT4G03210, AT4G03280, AT4G03320, AT4G03450, AT4G04330, AT4G04340, AT4G04350, AT4G04450, AT4G04490, AT4G04540, AT4G04620, AT4G04695, AT4G04810, AT4G04910, AT4G05010, AT4G05020, AT4G05030, AT4G05100, AT4G05497, AT4G07400, AT4G07960, AT4G08290, AT4G08770, AT4G09010, AT4G09160, AT4G09300, AT4G09420, AT4G09460, AT4G09570, AT4G09640, AT4G09650, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10720, AT4G10800, AT4G10955, AT4G10960, AT4G11000, AT4G11070, AT4G11140, AT4G11170, AT4G11290, AT4G11450, AT4G11655, AT4G11690, AT4G11840, AT4G11850, AT4G11890, AT4G11910, AT4G12030, AT4G12120, AT4G12310, AT4G12320, AT4G12330, AT4G12390, AT4G12410, AT4G12420, AT4G12480, AT4G12720, AT4G12730, AT4G12735, AT4G12800, AT4G12830, AT4G12850, AT4G12900, AT4G12917, AT4G12970, AT4G12980, AT4G13260, AT4G13280, AT4G13340, AT4G13560, AT4G13820, AT4G13900, AT4G13990, AT4G14365, AT4G14368, AT4G14370, AT4G14390, AT4G14480, AT4G14610, AT4G14630, AT4G14713, AT4G14740, AT4G14750, AT4G14940, AT4G15070, AT4G15100, AT4G15165, AT4G15200, AT4G15210, AT4G15230, AT4G15248, AT4G15280, AT4G15417, AT4G15420, AT4G15510, AT4G15700, AT4G15810, AT4G15960, AT4G16000, AT4G16140, AT4G16141, AT4G16370, AT4G16690, AT4G16820, AT4G16980, AT4G17180, AT4G17340, AT4G17460, AT4G17500, AT4G17560, AT4G17600, AT4G17660, AT4G17670, AT4G17695, AT4G17810, AT4G17900, AT4G18170, AT4G18197, AT4G18250, AT4G18360, AT4G18430, AT4G18670, AT4G18760, AT4G18950, AT4G18970, AT4G18980, AT4G19045, AT4G19170, AT4G19380, AT4G19460, AT4G19530, AT4G19925, AT4G19970, AT4G20110, AT4G20130, AT4G20140, AT4G20320, AT4G20325, AT4G20360, AT4G20430, AT4G20460, AT4G20820, AT4G20840, AT4G20970, AT4G21120, AT4G21280, AT4G21380, AT4G21390, AT4G21440, AT4G21534, AT4G21580, AT4G21610, AT4G21680, AT4G21730, AT4G21830, AT4G21840, AT4G21850, AT4G21870, AT4G21926, AT4G21930, AT4G21980, AT4G22070, AT4G22120, AT4G22305, AT4G22520, AT4G22530, AT4G22590, AT4G22592, AT4G22690, AT4G22890, AT4G22920, AT4G22970, AT4G22980, AT4G23000, AT4G23150, AT4G23270, AT4G23271, AT4G23290, AT4G23320, AT4G23450, AT4G23470, AT4G23550, AT4G23610, AT4G23700, AT4G23740, AT4G23820, AT4G23885, AT4G23940, AT4G24000, AT4G24026, AT4G24030, AT4G24040, AT4G24110, AT4G24250, AT4G24340, AT4G24570, AT4G24580, AT4G24660, AT4G24780, AT4G24790, AT4G24810, AT4G24930, AT4G24970, AT4G24972, AT4G24990, AT4G25050, AT4G25070, AT4G25080, AT4G25100, AT4G25200, AT4G25225, AT4G25390, AT4G25480, AT4G25490, AT4G25610, AT4G25690, AT4G25692, AT4G25780, AT4G25845, AT4G25880, AT4G25910, AT4G25960, AT4G25990, AT4G26060, AT4G26070, AT4G26080, AT4G26120, AT4G26200, AT4G26260, AT4G26270, AT4G26370, AT4G26470, AT4G26520, AT4G26530, AT4G26540, AT4G26542, AT4G26810, AT4G26990, AT4G27030, AT4G27410, AT4G27440, AT4G27720, AT4G27730, AT4G27740, AT4G27745, AT4G27830, AT4G27970, AT4G27980, AT4G28050, AT4G28080, AT4G28088, AT4G28162, AT4G28180, AT4G28390, AT4G28485, AT4G28570, AT4G28660, AT4G28703, AT4G28750, AT4G28780, AT4G29040, AT4G29060, AT4G29140, AT4G29230, AT4G29240, AT4G29310, AT4G29360, AT4G29610, AT4G29740, AT4G29810, AT4G29850, AT4G29930, AT4G29950, AT4G30020, AT4G30250, AT4G30290, AT4G30390, AT4G30410, AT4G30430, AT4G30520, AT4G30610, AT4G30640, AT4G30680, AT4G30993, AT4G31000, AT4G31060, AT4G31230, AT4G31290, AT4G31330, AT4G31800, AT4G31820, AT4G31850, AT4G31860, AT4G31870, AT4G31875, AT4G31890, AT4G32280, AT4G32340, AT4G32785, AT4G32870, AT4G32880, AT4G32980, AT4G33000, AT4G33010, AT4G33050, AT4G33150, AT4G33220, AT4G33260, AT4G33300, AT4G33355, AT4G33467, AT4G33470, AT4G33660, AT4G33925, AT4G33970, AT4G34060, AT4G34090, AT4G34120, AT4G34131, AT4G34200, AT4G34220, AT4G34290, AT4G34380, AT4G34390, AT4G34760, AT4G34770, AT4G34830, AT4G34860, AT4G34900, AT4G34970, AT4G34980, AT4G35090, AT4G35110, AT4G35165, AT4G35170, AT4G35180, AT4G35250, AT4G35290, AT4G35420, AT4G35430, AT4G35440, AT4G35500, AT4G35590, AT4G35600, AT4G35640, AT4G35840, AT4G36090, AT4G36110, AT4G36150, AT4G36180, AT4G36190, AT4G36380, AT4G36410, AT4G36540, AT4G36700, AT4G36710, AT4G36820, AT4G36900, AT4G36950, AT4G36988, AT4G36990, AT4G37010, AT4G37030, AT4G37150, AT4G37180, AT4G37330, AT4G37370, AT4G37390, AT4G37450, AT4G37550, AT4G37553, AT4G37608, AT4G37610, AT4G37690, AT4G37700, AT4G37800, AT4G37850, AT4G37900, AT4G37925, AT4G37930, AT4G37990, AT4G38000, AT4G38060, AT4G38160, AT4G38260, AT4G38400, AT4G38430, AT4G38560, AT4G38660, AT4G38670, AT4G38700, AT4G38770, AT4G38840, AT4G38860, AT4G38970, AT4G39020, AT4G39030, AT4G39190, AT4G39350, AT4G39380, AT4G39404, AT4G39610, AT4G39670, AT4G39710, AT4G39740, AT4G39770, AT4G39780, AT4G39830, AT4G39890, AT4G40020, AT4G40042, AT5G01050, AT5G01075, AT5G01100, AT5G01210, AT5G01215, AT5G01240, AT5G01250, AT5G01380, AT5G01490, AT5G01530, AT5G01550, AT5G01610, AT5G01640, AT5G01730, AT5G01820, AT5G01850, AT5G01900, AT5G01920, AT5G01930, AT5G02020, AT5G02100, AT5G02160, AT5G02170, AT5G02180, AT5G02320, AT5G02490, AT5G02502, AT5G02520, AT5G02540, AT5G02570, AT5G02590, AT5G02600, AT5G02690, AT5G02760, AT5G02780, AT5G02940, AT5G03150, AT5G03170, AT5G03210, AT5G03270, AT5G03350, AT5G03610, AT5G03890, AT5G04160, AT5G04180, AT5G04190, AT5G04230, AT5G04250, AT5G04360, AT5G04530, AT5G04680, AT5G04720, AT5G04810, AT5G04860, AT5G04900, AT5G04910, AT5G04950, AT5G05300, AT5G05430, AT5G05460, AT5G05580, AT5G05730, AT5G05740, AT5G05890, AT5G06090, AT5G06250, AT5G06310, AT5G06390, AT5G06470, AT5G06670, AT5G06750, AT5G06760, AT5G06860, AT5G06980, AT5G06990, AT5G07010, AT5G07020, AT5G07030, AT5G07070, AT5G07310, AT5G07322, AT5G07440, AT5G07570, AT5G07590, AT5G07650, AT5G07660, AT5G07690, AT5G07780, AT5G07900, AT5G07990, AT5G08000, AT5G08050, AT5G08240, AT5G08565, AT5G08630, AT5G08760, AT5G08790, AT5G09290, AT5G09320, AT5G09440, AT5G09470, AT5G09660, AT5G09730, AT5G09800, AT5G09820, AT5G09980, AT5G10150, AT5G10180, AT5G10250, AT5G10340, AT5G10380, AT5G10430, AT5G10440, AT5G10470, AT5G10530, AT5G10625, AT5G10690, AT5G10695, AT5G11070, AT5G11210, AT5G11480, AT5G11500, AT5G11520, AT5G11550, AT5G11650, AT5G11860, AT5G11870, AT5G11920, AT5G11970, AT5G12250, AT5G12300, AT5G12340, AT5G12860, AT5G12880, AT5G12900, AT5G12930, AT5G12950, AT5G13080, AT5G13140, AT5G13190, AT5G13220, AT5G13320, AT5G13330, AT5G13400, AT5G13510, AT5G13630, AT5G13690, AT5G13730, AT5G13820, AT5G13920, AT5G14200, AT5G14420, AT5G14450, AT5G14470, AT5G14565, AT5G14570, AT5G14650, AT5G14740, AT5G14760, AT5G14920, AT5G14930, AT5G15190, AT5G15210, AT5G15350, AT5G15580, AT5G15870, AT5G16000, AT5G16030, AT5G16170, AT5G16350, AT5G16360, AT5G16390, AT5G16400, AT5G16450, AT5G16530, AT5G16540, AT5G16590, AT5G16600, AT5G16715, AT5G16810, AT5G16880, AT5G17060, AT5G17330, AT5G17390, AT5G17450, AT5G17520, AT5G17640, AT5G17670, AT5G17760, AT5G17780, AT5G18030, AT5G18080, AT5G18130, AT5G18270, AT5G18570, AT5G18660, AT5G18661, AT5G18670, AT5G18690, AT5G18780, AT5G19190, AT5G19230, AT5G19240, AT5G19440, AT5G19450, AT5G19490, AT5G19780, AT5G19810, AT5G19930, AT5G19940, AT5G20000, AT5G20230, AT5G20270, AT5G20400, AT5G20635, AT5G20740, AT5G20830, AT5G20870, AT5G20910, AT5G20960, AT5G21100, AT5G21222, AT5G21430, AT5G21910, AT5G21920, AT5G21930, AT5G22060, AT5G22300, AT5G22340, AT5G22380, AT5G22460, AT5G22540, AT5G22570, AT5G22630, AT5G22640, AT5G22800, AT5G23010, AT5G23060, AT5G23160, AT5G23170, AT5G23210, AT5G23360, AT5G23540, AT5G23580, AT5G23870, AT5G23920, AT5G23980, AT5G24000, AT5G24010, AT5G24090, AT5G24140, AT5G24200, AT5G24205, AT5G24206, AT5G24210, AT5G24300, AT5G24490, AT5G24530, AT5G24540, AT5G24750, AT5G24910, AT5G24920, AT5G25130, AT5G25140, AT5G25190, AT5G25250, AT5G25260, AT5G25280, AT5G25440, AT5G25450, AT5G25451, AT5G25460, AT5G25590, AT5G25820, AT5G25830, AT5G25910, AT5G25920, AT5G25930, AT5G26010, AT5G26170, AT5G26220, AT5G26260, AT5G26330, AT5G26340, AT5G26622, AT5G26670, AT5G26690, AT5G26700, AT5G26731, AT5G26820, AT5G26920, AT5G27000, AT5G27060, AT5G27360, AT5G27390, AT5G27420, AT5G27520, AT5G27610, AT5G27660, AT5G27730, AT5G27830, AT5G27920, AT5G28020, AT5G28050, AT5G28237, AT5G28450, AT5G28500, AT5G28646, AT5G28830, AT5G33280, AT5G34780, AT5G34795, AT5G35170, AT5G35200, AT5G35520, AT5G35580, AT5G35630, AT5G35670, AT5G35680, AT5G35740, AT5G35750, AT5G35790, AT5G36920, AT5G37480, AT5G37600, AT5G37660, AT5G37740, AT5G38030, AT5G38280, AT5G38410, AT5G38420, AT5G38430, AT5G38510, AT5G38520, AT5G38710, AT5G38895, AT5G38900, AT5G39040, AT5G39050, AT5G39090, AT5G39210, AT5G39520, AT5G39610, AT5G39660, AT5G39680, AT5G39785, AT5G39950, AT5G40010, AT5G40150, AT5G40210, AT5G40240, AT5G40330, AT5G40348, AT5G40380, AT5G40610, AT5G40690, AT5G40730, AT5G40880, AT5G40890, AT5G41050, AT5G41080, AT5G41160, AT5G41180, AT5G41280, AT5G41315, AT5G41550, AT5G41560, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41750, AT5G41761, AT5G41920, AT5G42010, AT5G42050, AT5G42070, AT5G42100, AT5G42200, AT5G42240, AT5G42250, AT5G42380, AT5G42830, AT5G43150, AT5G43400, AT5G43580, AT5G43650, AT5G43750, AT5G43860, AT5G43870, AT5G43910, AT5G44020, AT5G44050, AT5G44130, AT5G44160, AT5G44190, AT5G44260, AT5G44460, AT5G44480, AT5G44530, AT5G44565, AT5G44568, AT5G44570, AT5G44585, AT5G44600, AT5G44680, AT5G44820, AT5G44990, AT5G45000, AT5G45070, AT5G45080, AT5G45090, AT5G45100, AT5G45110, AT5G45310, AT5G45340, AT5G45370, AT5G45440, AT5G45475, AT5G45510, AT5G45630, AT5G45650, AT5G45670, AT5G45770, AT5G45830, AT5G45840, AT5G45930, AT5G46110, AT5G46180, AT5G46220, AT5G46230, AT5G46290, AT5G46350, AT5G46440, AT5G46520, AT5G46570, AT5G46600, AT5G46690, AT5G46700, AT5G46870, AT5G47050, AT5G47060, AT5G47070, AT5G47120, AT5G47130, AT5G47140, AT5G47200, AT5G47440, AT5G47500, AT5G47550, AT5G47730, AT5G47740, AT5G47900, AT5G48180, AT5G48290, AT5G48320, AT5G48360, AT5G48400, AT5G48410, AT5G48545, AT5G48657, AT5G48790, AT5G48820, AT5G48900, AT5G48910, AT5G49020, AT5G49170, AT5G49215, AT5G49390, AT5G49525, AT5G49570, AT5G49680, AT5G49690, AT5G49700, AT5G49730, AT5G49740, AT5G50090, AT5G50350, AT5G50360, AT5G50380, AT5G50420, AT5G50450, AT5G50760, AT5G51060, AT5G51070, AT5G51380, AT5G51460, AT5G51480, AT5G51550, AT5G51560, AT5G51630, AT5G51640, AT5G51720, AT5G51740, AT5G51820, AT5G51830, AT5G51850, AT5G52100, AT5G52110, AT5G52190, AT5G52300, AT5G52570, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52770, AT5G52800, AT5G52820, AT5G52970, AT5G52990, AT5G53120, AT5G53144, AT5G53290, AT5G53360, AT5G53490, AT5G53588, AT5G53590, AT5G53710, AT5G53740, AT5G53820, AT5G53830, AT5G53860, AT5G53900, AT5G53905, AT5G53970, AT5G54040, AT5G54070, AT5G54075, AT5G54165, AT5G54180, AT5G54190, AT5G54270, AT5G54470, AT5G54490, AT5G54610, AT5G54650, AT5G54700, AT5G54770, AT5G54840, AT5G54860, AT5G54940, AT5G54980, AT5G55090, AT5G55170, AT5G55220, AT5G55380, AT5G55400, AT5G55410, AT5G55450, AT5G55460, AT5G55480, AT5G55740, AT5G55850, AT5G56040, AT5G56050, AT5G56100, AT5G56340, AT5G56590, AT5G56850, AT5G56890, AT5G56970, AT5G57050, AT5G57100, AT5G57150, AT5G57170, AT5G57260, AT5G57500, AT5G57510, AT5G57780, AT5G57785, AT5G57900, AT5G57910, AT5G58140, AT5G58160, AT5G58250, AT5G58260, AT5G58300, AT5G58310, AT5G58330, AT5G58390, AT5G58480, AT5G58600, AT5G58620, AT5G58840, AT5G59130, AT5G59140, AT5G59220, AT5G59250, AT5G59490, AT5G59530, AT5G59580, AT5G59590, AT5G59680, AT5G59750, AT5G59890, AT5G60280, AT5G60490, AT5G60530, AT5G60660, AT5G60730, AT5G60800, AT5G60900, AT5G60910, AT5G61010, AT5G61070, AT5G61130, AT5G61160, AT5G61190, AT5G61210, AT5G61250, AT5G61350, AT5G61390, AT5G61420, AT5G61430, AT5G61490, AT5G61530, AT5G61560, AT5G61590, AT5G61660, AT5G61865, AT5G61900, AT5G62020, AT5G62150, AT5G62180, AT5G62350, AT5G62480, AT5G62670, AT5G62720, AT5G62730, AT5G62820, AT5G62840, AT5G62890, AT5G63130, AT5G63135, AT5G63180, AT5G63225, AT5G63240, AT5G63350, AT5G63500, AT5G63650, AT5G63810, AT5G63880, AT5G63990, AT5G64040, AT5G64120, AT5G64280, AT5G64370, AT5G64380, AT5G64530, AT5G64640, AT5G64780, AT5G64800, AT5G64810, AT5G64890, AT5G64910, AT5G64990, AT5G65010, AT5G65090, AT5G65170, AT5G65280, AT5G65300, AT5G65390, AT5G65410, AT5G65700, AT5G65730, AT5G66170, AT5G66330, AT5G66520, AT5G66570, AT5G66590, AT5G66640, AT5G66770, AT5G66890, AT5G66910, AT5G66920, AT5G67080, AT5G67310, AT5G67340, AT5G67360, AT5G67385, AT5G67410, AT5G67450, AT5G67600, ATCG00010, ATCG00020, ATCG00040, ATCG00065, ATCG00070, ATCG00080, ATCG00100, ATCG00120, ATCG00130, ATCG00140, ATCG00150, ATCG00160, ATCG00210, ATCG00220, ATCG00270, ATCG00280, ATCG00290, ATCG00300, ATCG00330, ATCG00340, ATCG00350, ATCG00360, ATCG00380, ATCG00400, ATCG00440, ATCG00450, ATCG00490, ATCG00500, ATCG00510, ATCG00520, ATCG00550, ATCG00560, ATCG00570, ATCG00580, ATCG00590, ATCG00600, ATCG00630, ATCG00650, ATCG00680, ATCG00690, ATCG00710, ATCG00720, ATCG00730, ATCG00890, ATCG00900, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG01000, ATCG01010, ATCG01050, ATCG01060, ATCG01070, ATCG01080, ATCG01090, ATCG01100, ATCG01130, ATCG01150, ATCG01180, ATCG01200, ATCG01210, ATCG01250, ATMG00020, ATMG00030, ATMG00060, ATMG00280, ATMG01130, ATMG01220, ATMG01330, ATMG01380, ATMG01390
## 64 NA
## 65 NA
## 66 AT1G01010, AT1G01030, AT1G01190, AT1G01340, AT1G01430, AT1G01480, AT1G01520, AT1G01560, AT1G01600, AT1G01680, AT1G01720, AT1G01900, AT1G02205, AT1G02220, AT1G02230, AT1G02400, AT1G02450, AT1G02460, AT1G02640, AT1G02650, AT1G02710, AT1G02750, AT1G03050, AT1G03130, AT1G03300, AT1G03457, AT1G03580, AT1G03820, AT1G03870, AT1G04310, AT1G04570, AT1G04700, AT1G04730, AT1G04780, AT1G04980, AT1G05100, AT1G05420, AT1G05680, AT1G05690, AT1G05710, AT1G05880, AT1G06000, AT1G06002, AT1G06160, AT1G06180, AT1G06570, AT1G06620, AT1G06760, AT1G07150, AT1G07300, AT1G07430, AT1G07500, AT1G07590, AT1G07600, AT1G07610, AT1G07670, AT1G07880, AT1G08050, AT1G08300, AT1G08380, AT1G08560, AT1G08860, AT1G08900, AT1G08920, AT1G09080, AT1G09180, AT1G09200, AT1G09240, AT1G09350, AT1G09440, AT1G09530, AT1G09750, AT1G09950, AT1G10020, AT1G10230, AT1G10340, AT1G10380, AT1G10410, AT1G10530, AT1G10560, AT1G10585, AT1G10586, AT1G10690, AT1G10710, AT1G10770, AT1G10910, AT1G10930, AT1G10990, AT1G11000, AT1G11185, AT1G11350, AT1G11380, AT1G11400, AT1G11480, AT1G12420, AT1G12460, AT1G12540, AT1G12700, AT1G12730, AT1G12860, AT1G13110, AT1G13280, AT1G13310, AT1G13330, AT1G13340, AT1G13650, AT1G13700, AT1G13740, AT1G13920, AT1G13990, AT1G14070, AT1G14120, AT1G14180, AT1G14185, AT1G14260, AT1G14440, AT1G14700, AT1G15010, AT1G15100, AT1G15110, AT1G15125, AT1G15150, AT1G15405, AT1G15415, AT1G15420, AT1G15520, AT1G15550, AT1G15670, AT1G15890, AT1G15980, AT1G15990, AT1G16300, AT1G16640, AT1G16850, AT1G17147, AT1G17380, AT1G17420, AT1G17500, AT1G17550, AT1G17600, AT1G17750, AT1G17830, AT1G17940, AT1G17990, AT1G18020, AT1G18090, AT1G18415, AT1G18420, AT1G18550, AT1G18620, AT1G18650, AT1G19160, AT1G19180, AT1G19230, AT1G19270, AT1G19340, AT1G19490, AT1G19570, AT1G19620, AT1G19640, AT1G19650, AT1G19670, AT1G19680, AT1G20065, AT1G20070, AT1G20310, AT1G20450, AT1G20640, AT1G20970, AT1G21000, AT1G21120, AT1G21130, AT1G21326, AT1G21410, AT1G21520, AT1G21525, AT1G21550, AT1G21580, AT1G21910, AT1G21920, AT1G22220, AT1G22330, AT1G22370, AT1G22400, AT1G22470, AT1G22480, AT1G22490, AT1G22590, AT1G22740, AT1G22770, AT1G23040, AT1G23052, AT1G23080, AT1G23120, AT1G23200, AT1G23205, AT1G23390, AT1G23470, AT1G23480, AT1G23550, AT1G23750, AT1G23850, AT1G24090, AT1G24145, AT1G24210, AT1G24600, AT1G25425, AT1G25440, AT1G25450, AT1G25500, AT1G26150, AT1G26420, AT1G26660, AT1G26730, AT1G26770, AT1G26800, AT1G26920, AT1G26930, AT1G26960, AT1G27020, AT1G27110, AT1G27300, AT1G27420, AT1G27460, AT1G27480, AT1G27720, AT1G27730, AT1G27760, AT1G28010, AT1G28050, AT1G28330, AT1G28360, AT1G28370, AT1G28400, AT1G28480, AT1G28660, AT1G28670, AT1G29050, AT1G29195, AT1G29290, AT1G29330, AT1G29600, AT1G29640, AT1G29660, AT1G29715, AT1G30040, AT1G30100, AT1G30135, AT1G30240, AT1G30260, AT1G30320, AT1G30520, AT1G30620, AT1G30840, AT1G30850, AT1G31120, AT1G31173, AT1G31290, AT1G31355, AT1G31550, AT1G31820, AT1G31900, AT1G31920, AT1G31950, AT1G32560, AT1G32640, AT1G32730, AT1G32740, AT1G32870, AT1G32910, AT1G32960, AT1G33055, AT1G33110, AT1G33240, AT1G33260, AT1G33600, AT1G33770, AT1G33811, AT1G34180, AT1G34315, AT1G34420, AT1G35140, AT1G35210, AT1G36940, AT1G42980, AT1G43160, AT1G43245, AT1G43710, AT1G43910, AT1G44170, AT1G44350, AT1G44900, AT1G45145, AT1G47510, AT1G47890, AT1G48000, AT1G48100, AT1G48260, AT1G48315, AT1G48320, AT1G48370, AT1G48480, AT1G48780, AT1G49010, AT1G49050, AT1G49200, AT1G49230, AT1G49450, AT1G49520, AT1G50040, AT1G50180, AT1G50260, AT1G50590, AT1G50640, AT1G50732, AT1G51140, AT1G51660, AT1G51760, AT1G51780, AT1G51850, AT1G51940, AT1G52030, AT1G52190, AT1G52230, AT1G52315, AT1G52565, AT1G52690, AT1G52710, AT1G52720, AT1G52750, AT1G52760, AT1G52770, AT1G52800, AT1G52890, AT1G53070, AT1G53230, AT1G53233, AT1G53320, AT1G53410, AT1G53470, AT1G53560, AT1G53620, AT1G53625, AT1G53760, AT1G53830, AT1G54030, AT1G54095, AT1G54100, AT1G54120, AT1G54130, AT1G54570, AT1G54730, AT1G54740, AT1G54820, AT1G54890, AT1G55330, AT1G55370, AT1G55610, AT1G56220, AT1G56580, AT1G56720, AT1G57560, AT1G57610, AT1G57630, AT1G57650, AT1G57943, AT1G58225, AT1G58270, AT1G58360, AT1G59640, AT1G59740, AT1G59950, AT1G60190, AT1G60270, AT1G60390, AT1G60830, AT1G60860, AT1G61065, AT1G61110, AT1G61120, AT1G61140, AT1G61190, AT1G61215, AT1G61240, AT1G61255, AT1G61260, AT1G61300, AT1G61340, AT1G61500, AT1G61610, AT1G61640, AT1G61890, AT1G62520, AT1G62790, AT1G62910, AT1G63080, AT1G63245, AT1G63260, AT1G63400, AT1G63570, AT1G63720, AT1G63880, AT1G64380, AT1G64610, AT1G64620, AT1G64625, AT1G64660, AT1G64670, AT1G65295, AT1G65500, AT1G65610, AT1G65845, AT1G66090, AT1G66170, AT1G66180, AT1G66280, AT1G66550, AT1G66590, AT1G66600, AT1G66725, AT1G66760, AT1G66780, AT1G66810, AT1G66920, AT1G66940, AT1G67070, AT1G67420, AT1G67590, AT1G68190, AT1G68200, AT1G68250, AT1G68340, AT1G68350, AT1G68390, AT1G68500, AT1G68520, AT1G68620, AT1G68780, AT1G68840, AT1G68935, AT1G68940, AT1G69260, AT1G69360, AT1G69480, AT1G69600, AT1G69610, AT1G69780, AT1G69790, AT1G69840, AT1G69870, AT1G69930, AT1G70100, AT1G70220, AT1G70300, AT1G70590, AT1G70640, AT1G70690, AT1G70700, AT1G70800, AT1G70810, AT1G70940, AT1G71030, AT1G71100, AT1G71690, AT1G71697, AT1G71970, AT1G72060, AT1G72070, AT1G72120, AT1G72210, AT1G72240, AT1G72270, AT1G72330, AT1G72416, AT1G72450, AT1G72520, AT1G72600, AT1G72610, AT1G72680, AT1G72690, AT1G72700, AT1G72770, AT1G72890, AT1G72900, AT1G72910, AT1G72920, AT1G72940, AT1G73010, AT1G73110, AT1G73390, AT1G73480, AT1G73500, AT1G73690, AT1G73805, AT1G73810, AT1G73830, AT1G73890, AT1G73965, AT1G74080, AT1G74100, AT1G74200, AT1G74670, AT1G74710, AT1G74930, AT1G74940, AT1G74950, AT1G75020, AT1G75090, AT1G75120, AT1G75150, AT1G75220, AT1G75250, AT1G75370, AT1G75388, AT1G75390, AT1G75400, AT1G75440, AT1G75450, AT1G75580, AT1G75750, AT1G76040, AT1G76062, AT1G76100, AT1G76180, AT1G76240, AT1G76380, AT1G76590, AT1G76640, AT1G76650, AT1G76760, AT1G76790, AT1G76960, AT1G76980, AT1G77131, AT1G77138, AT1G77200, AT1G77210, AT1G77280, AT1G77450, AT1G77500, AT1G77510, AT1G77640, AT1G77680, AT1G77760, AT1G77890, AT1G77990, AT1G78000, AT1G78070, AT1G78080, AT1G78190, AT1G78210, AT1G78265, AT1G78270, AT1G78380, AT1G78450, AT1G78570, AT1G78820, AT1G78830, AT1G78860, AT1G78940, AT1G79110, AT1G79170, AT1G79270, AT1G79400, AT1G79520, AT1G79570, AT1G79960, AT1G80110, AT1G80120, AT1G80160, AT1G80300, AT1G80450, AT1G80580, AT1G80590, AT1G80610, AT1G80630, AT1G80820, AT1G80840, AT1G80850, AT2G01340, AT2G01420, AT2G01450, AT2G01630, AT2G01860, AT2G01890, AT2G02020, AT2G02310, AT2G02340, AT2G02780, AT2G02870, AT2G02950, AT2G02980, AT2G03310, AT2G03470, AT2G03750, AT2G03760, AT2G03980, AT2G04070, AT2G04100, AT2G04450, AT2G05160, AT2G05260, AT2G05790, AT2G05940, AT2G06050, AT2G06255, AT2G06850, AT2G07680, AT2G07690, AT2G13550, AT2G13650, AT2G13960, AT2G14050, AT2G14290, AT2G14660, AT2G14890, AT2G15760, AT2G15880, AT2G15890, AT2G16720, AT2G17036, AT2G17230, AT2G17500, AT2G17720, AT2G17740, AT2G17780, AT2G17880, AT2G18090, AT2G18196, AT2G18300, AT2G18560, AT2G18690, AT2G18890, AT2G18917, AT2G19310, AT2G19330, AT2G19930, AT2G20110, AT2G20142, AT2G20180, AT2G20825, AT2G20880, AT2G20950, AT2G21188, AT2G21350, AT2G21640, AT2G21780, AT2G22200, AT2G22330, AT2G22500, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G22860, AT2G22890, AT2G23030, AT2G23100, AT2G23110, AT2G23290, AT2G23340, AT2G23450, AT2G23600, AT2G23760, AT2G23810, AT2G24170, AT2G24210, AT2G24280, AT2G24285, AT2G24350, AT2G24610, AT2G24850, AT2G25130, AT2G25200, AT2G25240, AT2G25460, AT2G25470, AT2G25625, AT2G25680, AT2G25790, AT2G25900, AT2G26480, AT2G26530, AT2G26710, AT2G26870, AT2G27310, AT2G27500, AT2G27505, AT2G27510, AT2G27690, AT2G27830, AT2G28040, AT2G28050, AT2G28120, AT2G28200, AT2G28400, AT2G28460, AT2G28570, AT2G28720, AT2G28740, AT2G28870, AT2G28950, AT2G29290, AT2G29320, AT2G29410, AT2G29440, AT2G29450, AT2G29460, AT2G29470, AT2G29670, AT2G30020, AT2G30040, AT2G30140, AT2G30360, AT2G30362, AT2G30395, AT2G30400, AT2G30420, AT2G30424, AT2G30540, AT2G30550, AT2G30720, AT2G30750, AT2G30820, AT2G30830, AT2G30930, AT2G31150, AT2G31180, AT2G31380, AT2G31751, AT2G31940, AT2G31945, AT2G32100, AT2G32130, AT2G32140, AT2G32150, AT2G32210, AT2G32235, AT2G32510, AT2G32930, AT2G32990, AT2G33020, AT2G33050, AT2G33051, AT2G33060, AT2G33380, AT2G33480, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34500, AT2G34600, AT2G34620, AT2G34810, AT2G35170, AT2G35260, AT2G35290, AT2G35550, AT2G35590, AT2G35700, AT2G35710, AT2G35730, AT2G35940, AT2G35945, AT2G35950, AT2G36050, AT2G36080, AT2G36200, AT2G36380, AT2G36400, AT2G36590, AT2G36640, AT2G36830, AT2G36854, AT2G36970, AT2G37040, AT2G37170, AT2G37180, AT2G37440, AT2G37450, AT2G37590, AT2G37750, AT2G37760, AT2G37770, AT2G37870, AT2G37950, AT2G37980, AT2G38240, AT2G38250, AT2G38400, AT2G38490, AT2G38500, AT2G38530, AT2G38640, AT2G38750, AT2G38760, AT2G39030, AT2G39050, AT2G39180, AT2G39250, AT2G39350, AT2G39430, AT2G39520, AT2G39725, AT2G39730, AT2G39800, AT2G39980, AT2G40100, AT2G40140, AT2G40340, AT2G40435, AT2G40530, AT2G40610, AT2G40620, AT2G40711, AT2G40750, AT2G40850, AT2G41070, AT2G41250, AT2G41410, AT2G41540, AT2G41550, AT2G41660, AT2G41730, AT2G41820, AT2G41835, AT2G41870, AT2G41940, AT2G42040, AT2G42150, AT2G42170, AT2G42300, AT2G42320, AT2G42350, AT2G42380, AT2G42530, AT2G42540, AT2G42560, AT2G42690, AT2G42940, AT2G42960, AT2G43018, AT2G43020, AT2G43140, AT2G43150, AT2G43320, AT2G43535, AT2G43550, AT2G44370, AT2G44380, AT2G44450, AT2G44578, AT2G44600, AT2G44630, AT2G44740, AT2G44810, AT2G44840, AT2G44940, AT2G45180, AT2G45760, AT2G45830, AT2G45850, AT2G46040, AT2G46270, AT2G46370, AT2G46400, AT2G46510, AT2G46520, AT2G46670, AT2G46680, AT2G46790, AT2G46830, AT2G46940, AT2G47000, AT2G47140, AT2G47180, AT2G47260, AT2G47440, AT2G47480, AT2G47560, AT2G47670, AT2G47770, AT2G47780, AT2G47920, AT2G47930, AT2G47950, AT3G01280, AT3G01290, AT3G01480, AT3G01490, AT3G01830, AT3G01840, AT3G02140, AT3G02150, AT3G02160, AT3G02370, AT3G02510, AT3G02640, AT3G02875, AT3G02990, AT3G03310, AT3G03440, AT3G03650, AT3G03950, AT3G04000, AT3G04010, AT3G04060, AT3G04160, AT3G04300, AT3G04420, AT3G04720, AT3G05320, AT3G05330, AT3G05380, AT3G05390, AT3G05500, AT3G05640, AT3G05740, AT3G05800, AT3G05810, AT3G05905, AT3G06020, AT3G06030, AT3G06035, AT3G06070, AT3G06140, AT3G06420, AT3G06490, AT3G06500, AT3G06740, AT3G06890, AT3G07010, AT3G07210, AT3G07340, AT3G07350, AT3G07540, AT3G07700, AT3G07720, AT3G07870, AT3G08720, AT3G08940, AT3G08970, AT3G08990, AT3G09160, AT3G09280, AT3G09370, AT3G09450, AT3G09730, AT3G09780, AT3G09800, AT3G09830, AT3G09910, AT3G09940, AT3G10040, AT3G10120, AT3G10520, AT3G10525, AT3G10815, AT3G11110, AT3G11150, AT3G11170, AT3G11210, AT3G11330, AT3G11340, AT3G11410, AT3G11420, AT3G11450, AT3G11470, AT3G11480, AT3G11580, AT3G11840, AT3G12110, AT3G12150, AT3G12170, AT3G12320, AT3G12610, AT3G12820, AT3G12920, AT3G13000, AT3G13062, AT3G13080, AT3G13100, AT3G13610, AT3G13730, AT3G13910, AT3G14050, AT3G14060, AT3G14210, AT3G14240, AT3G14440, AT3G14560, AT3G14740, AT3G14840, AT3G14870, AT3G15210, AT3G15356, AT3G15400, AT3G15450, AT3G15500, AT3G15570, AT3G15760, AT3G15990, AT3G16150, AT3G16175, AT3G16250, AT3G16320, AT3G16330, AT3G16400, AT3G16450, AT3G16460, AT3G16500, AT3G16520, AT3G16530, AT3G16620, AT3G16990, AT3G17000, AT3G17160, AT3G17380, AT3G17510, AT3G17520, AT3G17609, AT3G17690, AT3G17800, AT3G17810, AT3G17860, AT3G18035, AT3G18050, AT3G18080, AT3G18295, AT3G18560, AT3G18730, AT3G18773, AT3G19270, AT3G19380, AT3G19580, AT3G19680, AT3G19850, AT3G19970, AT3G20015, AT3G20200, AT3G20350, AT3G20820, AT3G21060, AT3G21080, AT3G21230, AT3G21500, AT3G21660, AT3G21670, AT3G21700, AT3G21890, AT3G22060, AT3G22150, AT3G22160, AT3G22275, AT3G22290, AT3G22370, AT3G22460, AT3G22560, AT3G22660, AT3G22890, AT3G22910, AT3G22968, AT3G22970, AT3G23440, AT3G23550, AT3G23730, AT3G23740, AT3G23880, AT3G24420, AT3G24518, AT3G24520, AT3G24760, AT3G25130, AT3G25250, AT3G25500, AT3G25570, AT3G25572, AT3G25717, AT3G25760, AT3G25770, AT3G25780, AT3G25870, AT3G25882, AT3G25890, AT3G25910, AT3G26200, AT3G26320, AT3G26445, AT3G26460, AT3G26490, AT3G26510, AT3G26690, AT3G26740, AT3G26830, AT3G26840, AT3G26890, AT3G26932, AT3G27060, AT3G27170, AT3G27210, AT3G27360, AT3G27810, AT3G27870, AT3G27960, AT3G28007, AT3G28040, AT3G28070, AT3G28210, AT3G28220, AT3G28580, AT3G28600, AT3G28860, AT3G29000, AT3G29035, AT3G29250, AT3G29575, AT3G29670, AT3G29680, AT3G30380, AT3G30720, AT3G41979, AT3G42670, AT3G43250, AT3G43270, AT3G43440, AT3G44260, AT3G44717, AT3G44720, AT3G44830, AT3G44860, AT3G44870, AT3G45040, AT3G45130, AT3G45140, AT3G45290, AT3G45330, AT3G45638, AT3G45850, AT3G45940, AT3G45980, AT3G46080, AT3G46320, AT3G46510, AT3G46550, AT3G46580, AT3G46640, AT3G46650, AT3G46658, AT3G46660, AT3G46668, AT3G46670, AT3G46690, AT3G47340, AT3G47420, AT3G47500, AT3G47540, AT3G47730, AT3G47750, AT3G47960, AT3G48080, AT3G48200, AT3G48240, AT3G48350, AT3G48450, AT3G48460, AT3G48490, AT3G48510, AT3G48520, AT3G48530, AT3G48600, AT3G48660, AT3G48870, AT3G49400, AT3G49650, AT3G49870, AT3G50240, AT3G50260, AT3G50310, AT3G50410, AT3G50470, AT3G50620, AT3G50650, AT3G50760, AT3G50770, AT3G50800, AT3G50840, AT3G50930, AT3G51090, AT3G51220, AT3G51450, AT3G51740, AT3G51910, AT3G52070, AT3G52072, AT3G52100, AT3G52290, AT3G52310, AT3G52430, AT3G52470, AT3G52540, AT3G52630, AT3G52720, AT3G52740, AT3G52770, AT3G52870, AT3G53230, AT3G53600, AT3G53800, AT3G54320, AT3G54820, AT3G54910, AT3G54950, AT3G55090, AT3G55110, AT3G55290, AT3G55500, AT3G55580, AT3G55640, AT3G55880, AT3G55970, AT3G56000, AT3G56160, AT3G56260, AT3G56275, AT3G56400, AT3G56620, AT3G56710, AT3G56891, AT3G57010, AT3G57020, AT3G57157, AT3G57380, AT3G57450, AT3G57460, AT3G57480, AT3G57520, AT3G57540, AT3G57760, AT3G57880, AT3G57950, AT3G58120, AT3G58620, AT3G58795, AT3G59050, AT3G59052, AT3G59120, AT3G59250, AT3G59550, AT3G59710, AT3G59800, AT3G59900, AT3G59940, AT3G60160, AT3G60180, AT3G60320, AT3G60420, AT3G60450, AT3G60490, AT3G60961, AT3G60966, AT3G61185, AT3G61190, AT3G61390, AT3G61420, AT3G61430, AT3G61450, AT3G61630, AT3G61820, AT3G61890, AT3G61920, AT3G61930, AT3G62150, AT3G62500, AT3G62550, AT3G62690, AT3G62750, AT3G62760, AT3G63010, AT3G63060, AT3G63380, AT4G00020, AT4G00430, AT4G00950, AT4G01026, AT4G01030, AT4G01330, AT4G01360, AT4G01460, AT4G01535, AT4G01540, AT4G01850, AT4G01895, AT4G02060, AT4G02075, AT4G02110, AT4G02220, AT4G02320, AT4G02330, AT4G02380, AT4G02540, AT4G02630, AT4G02850, AT4G02900, AT4G03115, AT4G03140, AT4G03190, AT4G03210, AT4G03320, AT4G04223, AT4G05010, AT4G05020, AT4G05030, AT4G05100, AT4G05130, AT4G05497, AT4G06534, AT4G06744, AT4G07400, AT4G07950, AT4G08170, AT4G08555, AT4G08870, AT4G09160, AT4G09430, AT4G09432, AT4G09460, AT4G10120, AT4G10290, AT4G10380, AT4G10390, AT4G10600, AT4G11140, AT4G11500, AT4G11690, AT4G11890, AT4G12000, AT4G12005, AT4G12040, AT4G12390, AT4G12420, AT4G12450, AT4G12480, AT4G12710, AT4G12720, AT4G12900, AT4G12917, AT4G12980, AT4G13100, AT4G13110, AT4G13340, AT4G13493, AT4G13494, AT4G13495, AT4G13560, AT4G13810, AT4G13860, AT4G14365, AT4G14560, AT4G14620, AT4G14622, AT4G14713, AT4G14750, AT4G14940, AT4G15100, AT4G15200, AT4G15230, AT4G15248, AT4G15280, AT4G15540, AT4G15660, AT4G15670, AT4G15680, AT4G15690, AT4G15700, AT4G15770, AT4G15810, AT4G15940, AT4G15960, AT4G15990, AT4G16000, AT4G16141, AT4G16370, AT4G16563, AT4G16680, AT4G16690, AT4G16730, AT4G16740, AT4G16760, AT4G16820, AT4G16980, AT4G17180, AT4G17230, AT4G17460, AT4G17810, AT4G18160, AT4G18170, AT4G18195, AT4G18197, AT4G18205, AT4G18360, AT4G18380, AT4G18440, AT4G18540, AT4G18670, AT4G18760, AT4G18950, AT4G18970, AT4G19090, AT4G19170, AT4G19370, AT4G19420, AT4G19530, AT4G19870, AT4G20000, AT4G20140, AT4G20260, AT4G20362, AT4G20430, AT4G20830, AT4G20970, AT4G21060, AT4G21120, AT4G21200, AT4G21215, AT4G21390, AT4G21440, AT4G21445, AT4G21570, AT4G21680, AT4G21780, AT4G21790, AT4G21830, AT4G21850, AT4G21870, AT4G22070, AT4G22560, AT4G22590, AT4G22592, AT4G22690, AT4G22710, AT4G22758, AT4G23050, AT4G23060, AT4G23290, AT4G23310, AT4G23400, AT4G23420, AT4G23450, AT4G23600, AT4G23680, AT4G24010, AT4G24030, AT4G24040, AT4G24110, AT4G24190, AT4G24275, AT4G24340, AT4G24380, AT4G24570, AT4G25390, AT4G25433, AT4G25480, AT4G25670, AT4G25672, AT4G25690, AT4G25692, AT4G26060, AT4G26070, AT4G26080, AT4G26120, AT4G26470, AT4G26760, AT4G26810, AT4G27140, AT4G27300, AT4G27350, AT4G27410, AT4G27440, AT4G27530, AT4G27590, AT4G27730, AT4G27830, AT4G27860, AT4G27870, AT4G28085, AT4G28088, AT4G28140, AT4G28150, AT4G28160, AT4G28162, AT4G28290, AT4G28310, AT4G28350, AT4G29740, AT4G29930, AT4G29950, AT4G30110, AT4G30180, AT4G30210, AT4G30410, AT4G30430, AT4G30460, AT4G30470, AT4G30530, AT4G31060, AT4G31330, AT4G31780, AT4G31800, AT4G31870, AT4G31875, AT4G31890, AT4G32280, AT4G32400, AT4G32450, AT4G32980, AT4G33000, AT4G33010, AT4G33050, AT4G33467, AT4G33560, AT4G33666, AT4G34200, AT4G34220, AT4G34360, AT4G34588, AT4G34590, AT4G34650, AT4G34710, AT4G34770, AT4G34860, AT4G34970, AT4G34980, AT4G35060, AT4G35110, AT4G35160, AT4G35170, AT4G35180, AT4G35320, AT4G35480, AT4G35550, AT4G35560, AT4G35590, AT4G35600, AT4G35630, AT4G35720, AT4G36010, AT4G36220, AT4G36380, AT4G36410, AT4G36500, AT4G36540, AT4G36690, AT4G36700, AT4G36780, AT4G36820, AT4G36900, AT4G36950, AT4G36988, AT4G36990, AT4G37030, AT4G37090, AT4G37180, AT4G37370, AT4G37390, AT4G37410, AT4G37700, AT4G37760, AT4G37800, AT4G37850, AT4G37925, AT4G37990, AT4G38000, AT4G38400, AT4G38810, AT4G38940, AT4G38950, AT4G39030, AT4G39320, AT4G39360, AT4G39404, AT4G39610, AT4G39670, AT4G39780, AT4G39980, AT5G01050, AT5G01100, AT5G01200, AT5G01210, AT5G01215, AT5G01380, AT5G01500, AT5G01560, AT5G01640, AT5G01740, AT5G01820, AT5G01840, AT5G01850, AT5G01900, AT5G01930, AT5G02020, AT5G02170, AT5G02260, AT5G02320, AT5G02400, AT5G02440, AT5G02460, AT5G02540, AT5G02760, AT5G02890, AT5G03030, AT5G03120, AT5G03150, AT5G03210, AT5G03350, AT5G03552, AT5G03610, AT5G03668, AT5G03670, AT5G03830, AT5G03890, AT5G04230, AT5G04250, AT5G04340, AT5G04720, AT5G04760, AT5G04770, AT5G04860, AT5G05140, AT5G05410, AT5G05460, AT5G05590, AT5G05600, AT5G05890, AT5G05965, AT5G06090, AT5G06250, AT5G06690, AT5G06750, AT5G06760, AT5G06980, AT5G06990, AT5G07010, AT5G07070, AT5G07150, AT5G07152, AT5G07440, AT5G07570, AT5G07580, AT5G07590, AT5G08130, AT5G08640, AT5G08790, AT5G09430, AT5G09440, AT5G09500, AT5G09730, AT5G09980, AT5G10150, AT5G10250, AT5G10260, AT5G10300, AT5G10340, AT5G10530, AT5G10625, AT5G10690, AT5G10720, AT5G10770, AT5G11070, AT5G11160, AT5G11260, AT5G11610, AT5G11650, AT5G11670, AT5G11860, AT5G11870, AT5G12340, AT5G12880, AT5G12900, AT5G13060, AT5G13080, AT5G13220, AT5G13320, AT5G13330, AT5G13730, AT5G13740, AT5G13760, AT5G13800, AT5G13820, AT5G13990, AT5G14510, AT5G14700, AT5G14760, AT5G14920, AT5G15030, AT5G15160, AT5G15190, AT5G15240, AT5G15350, AT5G15580, AT5G15770, AT5G15948, AT5G15950, AT5G16000, AT5G16030, AT5G16170, AT5G16360, AT5G16450, AT5G16530, AT5G16830, AT5G17450, AT5G17460, AT5G17490, AT5G17760, AT5G17780, AT5G17850, AT5G17860, AT5G18270, AT5G18290, AT5G18660, AT5G19100, AT5G19110, AT5G19160, AT5G19190, AT5G19230, AT5G19440, AT5G19450, AT5G19810, AT5G19930, AT5G19970, AT5G20180, AT5G20190, AT5G20410, AT5G20635, AT5G21222, AT5G21280, AT5G21930, AT5G21950, AT5G22060, AT5G22110, AT5G22390, AT5G22500, AT5G22530, AT5G22545, AT5G22630, AT5G22880, AT5G22920, AT5G23170, AT5G23210, AT5G23240, AT5G23280, AT5G23480, AT5G23590, AT5G23820, AT5G23950, AT5G24000, AT5G24010, AT5G24080, AT5G24090, AT5G24150, AT5G24155, AT5G24240, AT5G24280, AT5G24290, AT5G24470, AT5G24490, AT5G24540, AT5G24570, AT5G24770, AT5G24780, AT5G24910, AT5G25130, AT5G25190, AT5G25210, AT5G25240, AT5G25250, AT5G25260, AT5G25620, AT5G25630, AT5G26010, AT5G26170, AT5G26260, AT5G26340, AT5G26690, AT5G26700, AT5G26731, AT5G26920, AT5G27060, AT5G27150, AT5G27520, AT5G27610, AT5G27930, AT5G27950, AT5G28020, AT5G28237, AT5G28490, AT5G29000, AT5G33280, AT5G35580, AT5G35750, AT5G35790, AT5G38005, AT5G38130, AT5G38140, AT5G38280, AT5G38410, AT5G38420, AT5G38430, AT5G38710, AT5G38895, AT5G39050, AT5G39090, AT5G39320, AT5G39530, AT5G39610, AT5G39660, AT5G39670, AT5G39680, AT5G39865, AT5G40150, AT5G40210, AT5G40390, AT5G40460, AT5G40540, AT5G41050, AT5G41180, AT5G41280, AT5G41315, AT5G41550, AT5G41560, AT5G41590, AT5G41600, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G42380, AT5G42650, AT5G42900, AT5G43150, AT5G43160, AT5G43170, AT5G43380, AT5G43700, AT5G44020, AT5G44050, AT5G44130, AT5G44210, AT5G44260, AT5G44460, AT5G44569, AT5G44570, AT5G44600, AT5G44635, AT5G44650, AT5G44680, AT5G44990, AT5G45000, AT5G45110, AT5G45130, AT5G45630, AT5G45650, AT5G45790, AT5G46110, AT5G46270, AT5G46280, AT5G46440, AT5G46690, AT5G47130, AT5G47220, AT5G47230, AT5G47240, AT5G47730, AT5G48320, AT5G48360, AT5G48670, AT5G48910, AT5G49215, AT5G49390, AT5G49480, AT5G49525, AT5G49730, AT5G49740, AT5G50360, AT5G50450, AT5G50940, AT5G51060, AT5G51070, AT5G51380, AT5G51550, AT5G51560, AT5G51590, AT5G51670, AT5G51790, AT5G51830, AT5G51970, AT5G52050, AT5G52100, AT5G52510, AT5G52570, AT5G52660, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52830, AT5G52882, AT5G52900, AT5G52910, AT5G53110, AT5G53120, AT5G53170, AT5G53200, AT5G53290, AT5G53360, AT5G53588, AT5G53710, AT5G53760, AT5G54040, AT5G54100, AT5G54130, AT5G54190, AT5G54470, AT5G54630, AT5G54670, AT5G54700, AT5G54940, AT5G55090, AT5G55120, AT5G55180, AT5G55400, AT5G55410, AT5G55530, AT5G55700, AT5G56220, AT5G56580, AT5G56750, AT5G56760, AT5G56840, AT5G56850, AT5G56870, AT5G56880, AT5G56970, AT5G57050, AT5G57260, AT5G57310, AT5G57390, AT5G57500, AT5G57510, AT5G57550, AT5G57560, AT5G57630, AT5G57660, AT5G57780, AT5G57900, AT5G58150, AT5G58390, AT5G58620, AT5G58700, AT5G59050, AT5G59080, AT5G59090, AT5G59220, AT5G59340, AT5G59480, AT5G59490, AT5G59510, AT5G59540, AT5G59580, AT5G59590, AT5G59750, AT5G59760, AT5G59780, AT5G59820, AT5G59970, AT5G60100, AT5G60490, AT5G60790, AT5G60800, AT5G60850, AT5G60860, AT5G60870, AT5G60890, AT5G61000, AT5G61160, AT5G61390, AT5G61590, AT5G61810, AT5G61820, AT5G61865, AT5G61890, AT5G61960, AT5G62020, AT5G62070, AT5G62150, AT5G62170, AT5G62280, AT5G62430, AT5G62470, AT5G62730, AT5G63130, AT5G63350, AT5G63410, AT5G63450, AT5G63480, AT5G63800, AT5G63970, AT5G64040, AT5G64120, AT5G64170, AT5G64260, AT5G64330, AT5G64410, AT5G64530, AT5G64630, AT5G64700, AT5G64710, AT5G64750, AT5G64810, AT5G64880, AT5G64890, AT5G65140, AT5G65280, AT5G65300, AT5G65350, AT5G65360, AT5G65380, AT5G65600, AT5G65660, AT5G65730, AT5G65890, AT5G66005, AT5G66490, AT5G66520, AT5G66650, AT5G66770, AT5G66880, AT5G66890, AT5G66910, AT5G67020, AT5G67080, AT5G67100, AT5G67160, AT5G67180, AT5G67190, AT5G67300, AT5G67310, AT5G67340, AT5G67480, ATCG00020, ATCG00065, ATCG00140, ATCG00150, ATCG00160, ATCG00270, ATCG00280, ATCG00330, ATCG00440, ATCG00450, ATCG00490, ATCG00520, ATCG00550, ATCG00580, ATCG00690, ATCG00700, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00950, ATCG01000, ATCG01010, ATCG01050, ATCG01080, ATCG01090, ATCG01150, ATCG01180, ATCG01200, ATCG01210, ATMG00020, ATMG00060, ATMG00280
## 67 NA
## 68 NA
## 69 AT1G01010, AT1G01030, AT1G01190, AT1G01340, AT1G01430, AT1G01470, AT1G01480, AT1G01520, AT1G01560, AT1G01600, AT1G01680, AT1G01720, AT1G01900, AT1G02205, AT1G02220, AT1G02230, AT1G02400, AT1G02450, AT1G02460, AT1G02640, AT1G02650, AT1G02750, AT1G03050, AT1G03130, AT1G03300, AT1G03457, AT1G03580, AT1G03870, AT1G04310, AT1G04570, AT1G04700, AT1G04730, AT1G04980, AT1G05100, AT1G05420, AT1G05680, AT1G05690, AT1G05710, AT1G05880, AT1G06000, AT1G06002, AT1G06160, AT1G06180, AT1G06570, AT1G06620, AT1G06760, AT1G07150, AT1G07430, AT1G07500, AT1G07590, AT1G07600, AT1G07610, AT1G07670, AT1G07880, AT1G08050, AT1G08300, AT1G08380, AT1G08560, AT1G08860, AT1G08900, AT1G08920, AT1G09080, AT1G09180, AT1G09200, AT1G09240, AT1G09350, AT1G09440, AT1G09530, AT1G09750, AT1G09950, AT1G10230, AT1G10410, AT1G10530, AT1G10560, AT1G10585, AT1G10586, AT1G10690, AT1G10710, AT1G10770, AT1G10910, AT1G10930, AT1G11000, AT1G11185, AT1G11350, AT1G11380, AT1G11400, AT1G11480, AT1G12420, AT1G12460, AT1G12540, AT1G12700, AT1G12730, AT1G12860, AT1G13110, AT1G13280, AT1G13330, AT1G13340, AT1G13700, AT1G13740, AT1G13930, AT1G14070, AT1G14120, AT1G14185, AT1G14260, AT1G14440, AT1G14700, AT1G15010, AT1G15100, AT1G15110, AT1G15125, AT1G15150, AT1G15405, AT1G15520, AT1G15550, AT1G15670, AT1G15890, AT1G15980, AT1G15990, AT1G16300, AT1G16640, AT1G16850, AT1G17380, AT1G17420, AT1G17500, AT1G17550, AT1G17600, AT1G17750, AT1G17940, AT1G17990, AT1G18000, AT1G18010, AT1G18020, AT1G18090, AT1G18415, AT1G18420, AT1G18550, AT1G18620, AT1G19180, AT1G19230, AT1G19270, AT1G19340, AT1G19490, AT1G19570, AT1G19610, AT1G19640, AT1G19650, AT1G19670, AT1G19680, AT1G20030, AT1G20440, AT1G20450, AT1G20640, AT1G21120, AT1G21130, AT1G21410, AT1G21520, AT1G21525, AT1G21580, AT1G21910, AT1G21920, AT1G22220, AT1G22370, AT1G22400, AT1G22480, AT1G22490, AT1G22590, AT1G22740, AT1G22770, AT1G23052, AT1G23080, AT1G23120, AT1G23200, AT1G23205, AT1G23390, AT1G23470, AT1G23480, AT1G23550, AT1G24090, AT1G24210, AT1G25425, AT1G25440, AT1G25450, AT1G26150, AT1G26420, AT1G26660, AT1G26730, AT1G26770, AT1G26800, AT1G26930, AT1G26960, AT1G27420, AT1G27480, AT1G27720, AT1G27730, AT1G27760, AT1G28010, AT1G28050, AT1G28330, AT1G28360, AT1G28370, AT1G28480, AT1G28660, AT1G28670, AT1G29050, AT1G29195, AT1G29290, AT1G29330, AT1G29430, AT1G29440, AT1G29450, AT1G29460, AT1G29500, AT1G29510, AT1G29640, AT1G29660, AT1G29715, AT1G30040, AT1G30100, AT1G30135, AT1G30260, AT1G30320, AT1G30520, AT1G30620, AT1G30840, AT1G31120, AT1G31173, AT1G31290, AT1G31355, AT1G31550, AT1G31820, AT1G31900, AT1G31950, AT1G32560, AT1G32640, AT1G32730, AT1G32740, AT1G32870, AT1G32910, AT1G32960, AT1G33055, AT1G33110, AT1G33240, AT1G33260, AT1G33600, AT1G33770, AT1G33811, AT1G34180, AT1G34420, AT1G35140, AT1G35210, AT1G42980, AT1G43160, AT1G43245, AT1G43710, AT1G43910, AT1G44170, AT1G44350, AT1G44900, AT1G45145, AT1G47510, AT1G47890, AT1G48000, AT1G48100, AT1G48260, AT1G48315, AT1G48320, AT1G48370, AT1G48480, AT1G49010, AT1G49050, AT1G49200, AT1G49230, AT1G49520, AT1G50180, AT1G50260, AT1G50640, AT1G50732, AT1G51140, AT1G51400, AT1G51660, AT1G51760, AT1G51780, AT1G51850, AT1G51940, AT1G52030, AT1G52190, AT1G52230, AT1G52315, AT1G52690, AT1G52710, AT1G52750, AT1G52760, AT1G52770, AT1G52800, AT1G52827, AT1G52890, AT1G53070, AT1G53230, AT1G53233, AT1G53320, AT1G53410, AT1G53470, AT1G53560, AT1G53620, AT1G53830, AT1G54030, AT1G54100, AT1G54130, AT1G54570, AT1G54730, AT1G54820, AT1G55370, AT1G55610, AT1G56220, AT1G56720, AT1G57560, AT1G57610, AT1G57630, AT1G57650, AT1G57943, AT1G58270, AT1G58360, AT1G59640, AT1G59740, AT1G59950, AT1G60190, AT1G60270, AT1G60830, AT1G60860, AT1G61110, AT1G61120, AT1G61140, AT1G61190, AT1G61240, AT1G61300, AT1G61340, AT1G61500, AT1G61610, AT1G61640, AT1G61795, AT1G61890, AT1G62790, AT1G62910, AT1G63080, AT1G63245, AT1G63260, AT1G63400, AT1G63530, AT1G63570, AT1G63720, AT1G63880, AT1G64320, AT1G64380, AT1G64610, AT1G64620, AT1G64625, AT1G64660, AT1G64670, AT1G65295, AT1G65610, AT1G66090, AT1G66170, AT1G66180, AT1G66280, AT1G66550, AT1G66600, AT1G66725, AT1G66760, AT1G66780, AT1G66810, AT1G66920, AT1G66940, AT1G67070, AT1G67420, AT1G68190, AT1G68200, AT1G68390, AT1G68500, AT1G68520, AT1G68620, AT1G68780, AT1G68840, AT1G68940, AT1G69260, AT1G69480, AT1G69600, AT1G69610, AT1G69780, AT1G69790, AT1G69840, AT1G69870, AT1G69930, AT1G70300, AT1G70640, AT1G70690, AT1G70700, AT1G70800, AT1G70810, AT1G70940, AT1G71030, AT1G71100, AT1G71690, AT1G71697, AT1G72060, AT1G72070, AT1G72120, AT1G72210, AT1G72270, AT1G72330, AT1G72416, AT1G72430, AT1G72450, AT1G72520, AT1G72600, AT1G72610, AT1G72680, AT1G72700, AT1G72770, AT1G72890, AT1G72900, AT1G72910, AT1G72920, AT1G72940, AT1G73010, AT1G73110, AT1G73390, AT1G73480, AT1G73500, AT1G73690, AT1G73805, AT1G73810, AT1G73830, AT1G73890, AT1G73965, AT1G74080, AT1G74100, AT1G74200, AT1G74670, AT1G74710, AT1G74930, AT1G74940, AT1G74950, AT1G75020, AT1G75090, AT1G75120, AT1G75220, AT1G75250, AT1G75370, AT1G75388, AT1G75390, AT1G75400, AT1G75440, AT1G75450, AT1G75580, AT1G75750, AT1G76040, AT1G76062, AT1G76100, AT1G76180, AT1G76240, AT1G76650, AT1G76760, AT1G76790, AT1G77131, AT1G77138, AT1G77200, AT1G77210, AT1G77280, AT1G77450, AT1G77500, AT1G77510, AT1G77640, AT1G77680, AT1G77760, AT1G77890, AT1G77990, AT1G78000, AT1G78080, AT1G78190, AT1G78210, AT1G78265, AT1G78270, AT1G78380, AT1G78570, AT1G78820, AT1G78830, AT1G78860, AT1G78940, AT1G79110, AT1G79270, AT1G79400, AT1G79520, AT1G79570, AT1G79960, AT1G80110, AT1G80120, AT1G80160, AT1G80300, AT1G80580, AT1G80590, AT1G80630, AT1G80820, AT1G80840, AT1G80850, AT2G01340, AT2G01420, AT2G01450, AT2G01630, AT2G01860, AT2G01890, AT2G02020, AT2G02310, AT2G02340, AT2G02780, AT2G02870, AT2G02950, AT2G02980, AT2G03470, AT2G03750, AT2G03760, AT2G03980, AT2G04070, AT2G04100, AT2G04450, AT2G05260, AT2G05790, AT2G05940, AT2G06050, AT2G06255, AT2G06850, AT2G07680, AT2G07690, AT2G13650, AT2G13960, AT2G14050, AT2G14290, AT2G14890, AT2G15880, AT2G15890, AT2G16720, AT2G17036, AT2G17230, AT2G17500, AT2G17720, AT2G17740, AT2G17780, AT2G17880, AT2G18090, AT2G18196, AT2G18300, AT2G18560, AT2G18890, AT2G18917, AT2G19310, AT2G19930, AT2G20110, AT2G20142, AT2G20170, AT2G20180, AT2G20825, AT2G20880, AT2G20950, AT2G21188, AT2G21640, AT2G22200, AT2G22330, AT2G22500, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G22860, AT2G22890, AT2G23030, AT2G23100, AT2G23290, AT2G23340, AT2G23450, AT2G23600, AT2G23760, AT2G23810, AT2G24170, AT2G24210, AT2G24280, AT2G24350, AT2G24610, AT2G24850, AT2G25130, AT2G25240, AT2G25470, AT2G25680, AT2G25790, AT2G25900, AT2G26480, AT2G26710, AT2G26870, AT2G27500, AT2G27510, AT2G27690, AT2G27830, AT2G28040, AT2G28050, AT2G28120, AT2G28200, AT2G28400, AT2G28460, AT2G28720, AT2G28740, AT2G28870, AT2G28950, AT2G29290, AT2G29320, AT2G29410, AT2G29440, AT2G29450, AT2G29460, AT2G29470, AT2G29670, AT2G30020, AT2G30040, AT2G30140, AT2G30360, AT2G30362, AT2G30395, AT2G30400, AT2G30420, AT2G30424, AT2G30540, AT2G30550, AT2G30750, AT2G30830, AT2G31150, AT2G31180, AT2G31380, AT2G31751, AT2G32100, AT2G32130, AT2G32140, AT2G32150, AT2G32240, AT2G32510, AT2G32930, AT2G32990, AT2G33020, AT2G33050, AT2G33051, AT2G33060, AT2G33380, AT2G33480, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34500, AT2G34510, AT2G34600, AT2G34620, AT2G34810, AT2G35170, AT2G35260, AT2G35550, AT2G35590, AT2G35700, AT2G35710, AT2G35730, AT2G35940, AT2G35945, AT2G35950, AT2G36050, AT2G36080, AT2G36200, AT2G36380, AT2G36400, AT2G36590, AT2G36640, AT2G36830, AT2G36854, AT2G36970, AT2G37040, AT2G37170, AT2G37180, AT2G37440, AT2G37450, AT2G37590, AT2G37760, AT2G37770, AT2G37870, AT2G37950, AT2G37980, AT2G38240, AT2G38250, AT2G38400, AT2G38490, AT2G38530, AT2G38640, AT2G38750, AT2G38760, AT2G39030, AT2G39050, AT2G39180, AT2G39210, AT2G39250, AT2G39350, AT2G39430, AT2G39725, AT2G39730, AT2G39800, AT2G39980, AT2G40100, AT2G40140, AT2G40340, AT2G40435, AT2G40530, AT2G40610, AT2G40620, AT2G40711, AT2G40750, AT2G40850, AT2G41070, AT2G41250, AT2G41410, AT2G41540, AT2G41550, AT2G41660, AT2G41730, AT2G41820, AT2G41940, AT2G42040, AT2G42150, AT2G42300, AT2G42320, AT2G42350, AT2G42380, AT2G42530, AT2G42540, AT2G42560, AT2G42690, AT2G42940, AT2G42960, AT2G43018, AT2G43020, AT2G43140, AT2G43150, AT2G43320, AT2G43535, AT2G44370, AT2G44380, AT2G44450, AT2G44740, AT2G44810, AT2G44840, AT2G44940, AT2G45180, AT2G45210, AT2G45760, AT2G45830, AT2G45850, AT2G46040, AT2G46270, AT2G46370, AT2G46400, AT2G46510, AT2G46520, AT2G46670, AT2G46680, AT2G46790, AT2G46830, AT2G47000, AT2G47140, AT2G47180, AT2G47260, AT2G47440, AT2G47560, AT2G47670, AT2G47770, AT2G47780, AT2G47920, AT2G47930, AT3G01280, AT3G01290, AT3G01480, AT3G01490, AT3G01840, AT3G02140, AT3G02150, AT3G02160, AT3G02875, AT3G02990, AT3G03310, AT3G03440, AT3G03650, AT3G03820, AT3G03950, AT3G04000, AT3G04010, AT3G04060, AT3G04160, AT3G04420, AT3G04630, AT3G04720, AT3G05330, AT3G05380, AT3G05390, AT3G05500, AT3G05640, AT3G05740, AT3G05800, AT3G05905, AT3G06020, AT3G06030, AT3G06140, AT3G06420, AT3G06490, AT3G06500, AT3G06740, AT3G07010, AT3G07340, AT3G07350, AT3G07540, AT3G07700, AT3G07720, AT3G07870, AT3G08720, AT3G08940, AT3G08970, AT3G08990, AT3G09370, AT3G09450, AT3G09780, AT3G09800, AT3G09830, AT3G09910, AT3G09940, AT3G10040, AT3G10520, AT3G10525, AT3G10985, AT3G11110, AT3G11170, AT3G11210, AT3G11330, AT3G11340, AT3G11410, AT3G11420, AT3G11450, AT3G11470, AT3G11480, AT3G11580, AT3G11840, AT3G12110, AT3G12150, AT3G12170, AT3G12320, AT3G12610, AT3G12820, AT3G12830, AT3G12920, AT3G13000, AT3G13080, AT3G13100, AT3G13610, AT3G13730, AT3G14050, AT3G14210, AT3G14240, AT3G14440, AT3G14740, AT3G14840, AT3G14870, AT3G15210, AT3G15356, AT3G15450, AT3G15500, AT3G15570, AT3G15990, AT3G16150, AT3G16250, AT3G16320, AT3G16400, AT3G16450, AT3G16460, AT3G16500, AT3G16520, AT3G16530, AT3G16620, AT3G16990, AT3G17000, AT3G17380, AT3G17510, AT3G17520, AT3G17609, AT3G17690, AT3G17800, AT3G17810, AT3G17860, AT3G17910, AT3G18035, AT3G18080, AT3G18560, AT3G18730, AT3G18773, AT3G19270, AT3G19380, AT3G19580, AT3G19680, AT3G19850, AT3G20015, AT3G20200, AT3G20350, AT3G20820, AT3G21060, AT3G21230, AT3G21500, AT3G21660, AT3G21670, AT3G21700, AT3G21890, AT3G22060, AT3G22150, AT3G22275, AT3G22370, AT3G22460, AT3G22550, AT3G22560, AT3G22660, AT3G22890, AT3G22910, AT3G22968, AT3G22970, AT3G23440, AT3G23550, AT3G23730, AT3G24420, AT3G24518, AT3G24520, AT3G25250, AT3G25500, AT3G25570, AT3G25572, AT3G25717, AT3G25760, AT3G25770, AT3G25780, AT3G25882, AT3G25890, AT3G25910, AT3G26200, AT3G26320, AT3G26445, AT3G26460, AT3G26490, AT3G26510, AT3G26690, AT3G26830, AT3G26840, AT3G27060, AT3G27170, AT3G27210, AT3G27360, AT3G27810, AT3G27870, AT3G27960, AT3G28007, AT3G28040, AT3G28070, AT3G28210, AT3G28220, AT3G28580, AT3G28600, AT3G28860, AT3G29035, AT3G29250, AT3G29575, AT3G29670, AT3G29680, AT3G30720, AT3G41979, AT3G42670, AT3G43270, AT3G43440, AT3G44260, AT3G44326, AT3G44717, AT3G44720, AT3G44830, AT3G44860, AT3G44870, AT3G45040, AT3G45130, AT3G45140, AT3G45290, AT3G45330, AT3G45638, AT3G45850, AT3G45940, AT3G45980, AT3G46080, AT3G46320, AT3G46510, AT3G46550, AT3G46580, AT3G46640, AT3G46650, AT3G46658, AT3G46660, AT3G46668, AT3G46670, AT3G46690, AT3G47340, AT3G47420, AT3G47500, AT3G47540, AT3G47730, AT3G47750, AT3G47960, AT3G48080, AT3G48240, AT3G48350, AT3G48450, AT3G48460, AT3G48520, AT3G48530, AT3G48600, AT3G48870, AT3G49650, AT3G49870, AT3G50120, AT3G50240, AT3G50260, AT3G50310, AT3G50410, AT3G50470, AT3G50620, AT3G50650, AT3G50760, AT3G50800, AT3G50840, AT3G50930, AT3G50970, AT3G51220, AT3G51450, AT3G51740, AT3G51910, AT3G52072, AT3G52100, AT3G52310, AT3G52430, AT3G52470, AT3G52540, AT3G52630, AT3G52720, AT3G52740, AT3G52770, AT3G53230, AT3G53232, AT3G53600, AT3G53800, AT3G54320, AT3G54820, AT3G54950, AT3G55090, AT3G55110, AT3G55290, AT3G55500, AT3G55580, AT3G55640, AT3G55880, AT3G55970, AT3G56000, AT3G56160, AT3G56275, AT3G56400, AT3G56620, AT3G56710, AT3G56891, AT3G57010, AT3G57020, AT3G57157, AT3G57380, AT3G57460, AT3G57520, AT3G57760, AT3G57880, AT3G58120, AT3G58620, AT3G58795, AT3G59050, AT3G59052, AT3G59120, AT3G59550, AT3G59710, AT3G59900, AT3G59940, AT3G60160, AT3G60180, AT3G60320, AT3G60420, AT3G60490, AT3G60961, AT3G61113, AT3G61185, AT3G61190, AT3G61390, AT3G61420, AT3G61430, AT3G61450, AT3G61630, AT3G61820, AT3G61890, AT3G61900, AT3G61920, AT3G61930, AT3G62150, AT3G62550, AT3G62690, AT3G62750, AT3G62760, AT3G63010, AT3G63060, AT3G63380, AT4G00020, AT4G00430, AT4G00950, AT4G01026, AT4G01030, AT4G01330, AT4G01360, AT4G01460, AT4G01540, AT4G01850, AT4G01895, AT4G02060, AT4G02075, AT4G02110, AT4G02220, AT4G02320, AT4G02330, AT4G02380, AT4G02540, AT4G02630, AT4G02850, AT4G02900, AT4G03115, AT4G03140, AT4G03190, AT4G03210, AT4G03320, AT4G04223, AT4G05020, AT4G05030, AT4G05100, AT4G05130, AT4G05497, AT4G06534, AT4G06744, AT4G07400, AT4G07950, AT4G08170, AT4G08870, AT4G09160, AT4G09430, AT4G09432, AT4G09460, AT4G10120, AT4G10380, AT4G10390, AT4G10600, AT4G11140, AT4G11500, AT4G11690, AT4G11890, AT4G12000, AT4G12390, AT4G12410, AT4G12420, AT4G12480, AT4G12710, AT4G12720, AT4G12900, AT4G12917, AT4G12980, AT4G13100, AT4G13110, AT4G13340, AT4G13493, AT4G13494, AT4G13495, AT4G13560, AT4G13810, AT4G14365, AT4G14560, AT4G14620, AT4G14622, AT4G14713, AT4G14750, AT4G14940, AT4G15100, AT4G15200, AT4G15230, AT4G15248, AT4G15280, AT4G15540, AT4G15660, AT4G15670, AT4G15680, AT4G15690, AT4G15700, AT4G15770, AT4G15940, AT4G15960, AT4G16141, AT4G16370, AT4G16563, AT4G16680, AT4G16690, AT4G16730, AT4G16740, AT4G16760, AT4G16820, AT4G17180, AT4G17230, AT4G17460, AT4G17810, AT4G18160, AT4G18170, AT4G18195, AT4G18197, AT4G18205, AT4G18360, AT4G18440, AT4G18670, AT4G18760, AT4G18950, AT4G18970, AT4G19090, AT4G19170, AT4G19420, AT4G19530, AT4G19870, AT4G20140, AT4G20260, AT4G20362, AT4G20430, AT4G20830, AT4G20970, AT4G21060, AT4G21120, AT4G21200, AT4G21215, AT4G21390, AT4G21440, AT4G21445, AT4G21570, AT4G21680, AT4G21790, AT4G21830, AT4G21850, AT4G21870, AT4G22070, AT4G22590, AT4G22592, AT4G22620, AT4G22690, AT4G22710, AT4G22758, AT4G23050, AT4G23060, AT4G23290, AT4G23310, AT4G23400, AT4G23420, AT4G23450, AT4G23600, AT4G23680, AT4G24010, AT4G24040, AT4G24110, AT4G24190, AT4G24275, AT4G24340, AT4G24380, AT4G24570, AT4G24960, AT4G25390, AT4G25433, AT4G25480, AT4G25670, AT4G25672, AT4G25690, AT4G25692, AT4G26060, AT4G26070, AT4G26080, AT4G26120, AT4G26470, AT4G26760, AT4G26810, AT4G27140, AT4G27300, AT4G27410, AT4G27440, AT4G27590, AT4G27730, AT4G27830, AT4G27860, AT4G27870, AT4G28140, AT4G28160, AT4G28162, AT4G28350, AT4G29740, AT4G29930, AT4G29950, AT4G30110, AT4G30180, AT4G30210, AT4G30410, AT4G30430, AT4G30470, AT4G30530, AT4G31060, AT4G31330, AT4G31780, AT4G31800, AT4G31870, AT4G31890, AT4G32280, AT4G32400, AT4G32450, AT4G32980, AT4G33000, AT4G33010, AT4G33050, AT4G33467, AT4G34200, AT4G34220, AT4G34360, AT4G34588, AT4G34590, AT4G34650, AT4G34710, AT4G34760, AT4G34770, AT4G34790, AT4G34860, AT4G34970, AT4G34980, AT4G35060, AT4G35110, AT4G35160, AT4G35180, AT4G35480, AT4G35550, AT4G35560, AT4G35590, AT4G35600, AT4G35630, AT4G35720, AT4G35770, AT4G36010, AT4G36110, AT4G36220, AT4G36380, AT4G36410, AT4G36540, AT4G36690, AT4G36780, AT4G36820, AT4G36900, AT4G36950, AT4G36988, AT4G36990, AT4G37180, AT4G37370, AT4G37390, AT4G37410, AT4G37760, AT4G37800, AT4G37850, AT4G37925, AT4G37990, AT4G38000, AT4G38080, AT4G38400, AT4G38410, AT4G38700, AT4G38810, AT4G38840, AT4G38860, AT4G38940, AT4G38950, AT4G39030, AT4G39404, AT4G39610, AT4G39670, AT4G39740, AT4G39780, AT4G39980, AT5G01050, AT5G01100, AT5G01200, AT5G01210, AT5G01215, AT5G01380, AT5G01500, AT5G01560, AT5G01640, AT5G01820, AT5G01840, AT5G01850, AT5G01900, AT5G01930, AT5G02020, AT5G02170, AT5G02260, AT5G02320, AT5G02400, AT5G02460, AT5G02540, AT5G02760, AT5G02890, AT5G03030, AT5G03150, AT5G03210, AT5G03350, AT5G03552, AT5G03610, AT5G03668, AT5G03670, AT5G03890, AT5G04230, AT5G04250, AT5G04340, AT5G04720, AT5G04760, AT5G04770, AT5G05140, AT5G05410, AT5G05460, AT5G05590, AT5G05600, AT5G05890, AT5G06090, AT5G06250, AT5G06690, AT5G06750, AT5G06760, AT5G06980, AT5G06990, AT5G07010, AT5G07070, AT5G07150, AT5G07152, AT5G07440, AT5G07570, AT5G07580, AT5G08130, AT5G08640, AT5G08790, AT5G09430, AT5G09440, AT5G09500, AT5G09730, AT5G09980, AT5G10250, AT5G10260, AT5G10300, AT5G10340, AT5G10530, AT5G10625, AT5G10720, AT5G10770, AT5G11160, AT5G11260, AT5G11610, AT5G11650, AT5G11670, AT5G11860, AT5G11870, AT5G13060, AT5G13080, AT5G13220, AT5G13320, AT5G13330, AT5G13730, AT5G13740, AT5G13760, AT5G13800, AT5G13820, AT5G13990, AT5G14510, AT5G14700, AT5G14760, AT5G14920, AT5G15030, AT5G15160, AT5G15240, AT5G15350, AT5G15580, AT5G15770, AT5G15948, AT5G15950, AT5G15960, AT5G15970, AT5G16000, AT5G16170, AT5G16360, AT5G16450, AT5G16530, AT5G16830, AT5G17450, AT5G17460, AT5G17490, AT5G17760, AT5G17780, AT5G17850, AT5G17860, AT5G18030, AT5G18080, AT5G18270, AT5G18290, AT5G18660, AT5G19100, AT5G19110, AT5G19160, AT5G19440, AT5G19450, AT5G19810, AT5G19930, AT5G20180, AT5G20410, AT5G20635, AT5G21222, AT5G21280, AT5G21930, AT5G22060, AT5G22110, AT5G22390, AT5G22500, AT5G22630, AT5G22880, AT5G22920, AT5G23170, AT5G23210, AT5G23240, AT5G23280, AT5G23480, AT5G23590, AT5G23820, AT5G23950, AT5G24000, AT5G24010, AT5G24080, AT5G24090, AT5G24150, AT5G24155, AT5G24240, AT5G24280, AT5G24290, AT5G24470, AT5G24490, AT5G24540, AT5G24770, AT5G24780, AT5G24910, AT5G25130, AT5G25190, AT5G25250, AT5G25620, AT5G26010, AT5G26170, AT5G26260, AT5G26340, AT5G26690, AT5G26700, AT5G26920, AT5G27060, AT5G27150, AT5G27520, AT5G27610, AT5G27930, AT5G27950, AT5G28020, AT5G28237, AT5G28490, AT5G29000, AT5G33280, AT5G35580, AT5G35750, AT5G35790, AT5G38005, AT5G38130, AT5G38140, AT5G38280, AT5G38410, AT5G38420, AT5G38430, AT5G38710, AT5G38895, AT5G39050, AT5G39090, AT5G39320, AT5G39610, AT5G39660, AT5G39680, AT5G39865, AT5G40150, AT5G40210, AT5G40390, AT5G40460, AT5G40540, AT5G41180, AT5G41315, AT5G41550, AT5G41560, AT5G41590, AT5G41600, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G42380, AT5G42650, AT5G42900, AT5G43150, AT5G43160, AT5G43170, AT5G43380, AT5G43700, AT5G44020, AT5G44050, AT5G44130, AT5G44210, AT5G44260, AT5G44460, AT5G44569, AT5G44570, AT5G44600, AT5G44635, AT5G44650, AT5G44680, AT5G45000, AT5G45110, AT5G45130, AT5G45630, AT5G45650, AT5G45790, AT5G46110, AT5G46270, AT5G46280, AT5G46690, AT5G47130, AT5G47220, AT5G47230, AT5G47240, AT5G47730, AT5G48320, AT5G48360, AT5G48670, AT5G48910, AT5G49215, AT5G49390, AT5G49480, AT5G49730, AT5G49740, AT5G50450, AT5G50760, AT5G50940, AT5G51060, AT5G51070, AT5G51380, AT5G51550, AT5G51560, AT5G51590, AT5G51670, AT5G51790, AT5G51830, AT5G51970, AT5G52050, AT5G52100, AT5G52300, AT5G52310, AT5G52510, AT5G52570, AT5G52660, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52830, AT5G52882, AT5G52900, AT5G52910, AT5G53110, AT5G53120, AT5G53170, AT5G53200, AT5G53290, AT5G53360, AT5G53588, AT5G53590, AT5G53760, AT5G54040, AT5G54100, AT5G54130, AT5G54190, AT5G54470, AT5G54630, AT5G54670, AT5G54730, AT5G54940, AT5G55090, AT5G55120, AT5G55180, AT5G55400, AT5G55410, AT5G55530, AT5G55700, AT5G56100, AT5G56220, AT5G56580, AT5G56750, AT5G56760, AT5G56840, AT5G56850, AT5G56870, AT5G56970, AT5G57050, AT5G57260, AT5G57310, AT5G57390, AT5G57500, AT5G57510, AT5G57550, AT5G57560, AT5G57630, AT5G57660, AT5G57780, AT5G57900, AT5G58150, AT5G58390, AT5G58620, AT5G58700, AT5G59080, AT5G59090, AT5G59220, AT5G59340, AT5G59480, AT5G59490, AT5G59510, AT5G59540, AT5G59580, AT5G59590, AT5G59750, AT5G59780, AT5G59820, AT5G59970, AT5G60100, AT5G60490, AT5G60790, AT5G60800, AT5G60850, AT5G60860, AT5G60870, AT5G60890, AT5G61000, AT5G61160, AT5G61390, AT5G61590, AT5G61810, AT5G61890, AT5G61960, AT5G62020, AT5G62070, AT5G62150, AT5G62430, AT5G62470, AT5G62730, AT5G63130, AT5G63410, AT5G63450, AT5G63480, AT5G63800, AT5G63970, AT5G64040, AT5G64120, AT5G64170, AT5G64330, AT5G64410, AT5G64530, AT5G64630, AT5G64700, AT5G64710, AT5G64750, AT5G64810, AT5G64890, AT5G65140, AT5G65280, AT5G65350, AT5G65360, AT5G65380, AT5G65600, AT5G65660, AT5G65730, AT5G65890, AT5G66005, AT5G66400, AT5G66520, AT5G66650, AT5G66770, AT5G66880, AT5G66890, AT5G66910, AT5G67080, AT5G67100, AT5G67160, AT5G67180, AT5G67190, AT5G67210, AT5G67300, AT5G67310, AT5G67340, AT5G67480, ATCG00020, ATCG00065, ATCG00070, ATCG00140, ATCG00150, ATCG00160, ATCG00270, ATCG00280, ATCG00300, ATCG00330, ATCG00440, ATCG00450, ATCG00490, ATCG00520, ATCG00550, ATCG00580, ATCG00690, ATCG00700, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00950, ATCG01000, ATCG01010, ATCG01050, ATCG01080, ATCG01090, ATCG01150, ATCG01180, ATCG01200, ATCG01210, ATMG00020, ATMG00060, ATMG00280
## 70 NA
## 71 NA
## 72 AT1G01010, AT1G01030, AT1G01190, AT1G01340, AT1G01430, AT1G01470, AT1G01480, AT1G01520, AT1G01560, AT1G01600, AT1G01680, AT1G01720, AT1G01900, AT1G02205, AT1G02220, AT1G02230, AT1G02400, AT1G02405, AT1G02450, AT1G02460, AT1G02640, AT1G02650, AT1G02710, AT1G02750, AT1G03050, AT1G03130, AT1G03300, AT1G03457, AT1G03580, AT1G03820, AT1G03870, AT1G04310, AT1G04490, AT1G04570, AT1G04700, AT1G04730, AT1G04780, AT1G04980, AT1G05100, AT1G05420, AT1G05680, AT1G05690, AT1G05710, AT1G05880, AT1G06000, AT1G06002, AT1G06160, AT1G06180, AT1G06570, AT1G06620, AT1G06760, AT1G07150, AT1G07300, AT1G07430, AT1G07500, AT1G07590, AT1G07600, AT1G07610, AT1G07670, AT1G07880, AT1G08050, AT1G08300, AT1G08380, AT1G08560, AT1G08860, AT1G08900, AT1G08920, AT1G09080, AT1G09180, AT1G09200, AT1G09240, AT1G09350, AT1G09440, AT1G09530, AT1G09750, AT1G09950, AT1G10020, AT1G10230, AT1G10340, AT1G10380, AT1G10410, AT1G10530, AT1G10560, AT1G10585, AT1G10586, AT1G10657, AT1G10690, AT1G10710, AT1G10770, AT1G10910, AT1G10930, AT1G10990, AT1G11000, AT1G11185, AT1G11350, AT1G11380, AT1G11400, AT1G11480, AT1G11785, AT1G12320, AT1G12460, AT1G12540, AT1G12700, AT1G12730, AT1G12860, AT1G13110, AT1G13280, AT1G13330, AT1G13340, AT1G13650, AT1G13700, AT1G13740, AT1G13920, AT1G13930, AT1G13990, AT1G14070, AT1G14120, AT1G14180, AT1G14185, AT1G14260, AT1G14440, AT1G14700, AT1G15010, AT1G15100, AT1G15110, AT1G15125, AT1G15150, AT1G15405, AT1G15415, AT1G15420, AT1G15430, AT1G15520, AT1G15550, AT1G15670, AT1G15890, AT1G15980, AT1G15990, AT1G16300, AT1G16640, AT1G16850, AT1G17147, AT1G17380, AT1G17420, AT1G17500, AT1G17550, AT1G17600, AT1G17750, AT1G17830, AT1G17940, AT1G17990, AT1G18000, AT1G18010, AT1G18020, AT1G18090, AT1G18415, AT1G18420, AT1G18550, AT1G18620, AT1G18650, AT1G19160, AT1G19180, AT1G19200, AT1G19230, AT1G19270, AT1G19340, AT1G19490, AT1G19570, AT1G19610, AT1G19620, AT1G19640, AT1G19650, AT1G19670, AT1G19680, AT1G20030, AT1G20065, AT1G20070, AT1G20310, AT1G20440, AT1G20450, AT1G20640, AT1G20970, AT1G21000, AT1G21050, AT1G21120, AT1G21130, AT1G21326, AT1G21410, AT1G21520, AT1G21525, AT1G21550, AT1G21580, AT1G21910, AT1G21920, AT1G22220, AT1G22330, AT1G22370, AT1G22400, AT1G22480, AT1G22490, AT1G22590, AT1G22740, AT1G22770, AT1G23040, AT1G23050, AT1G23052, AT1G23080, AT1G23200, AT1G23205, AT1G23390, AT1G23470, AT1G23480, AT1G23550, AT1G23750, AT1G23850, AT1G24090, AT1G24145, AT1G24147, AT1G24210, AT1G24600, AT1G25422, AT1G25425, AT1G25440, AT1G25450, AT1G25500, AT1G26150, AT1G26420, AT1G26660, AT1G26730, AT1G26762, AT1G26770, AT1G26800, AT1G26920, AT1G26930, AT1G26960, AT1G27020, AT1G27300, AT1G27420, AT1G27460, AT1G27480, AT1G27720, AT1G27730, AT1G27760, AT1G28010, AT1G28050, AT1G28330, AT1G28360, AT1G28370, AT1G28400, AT1G28480, AT1G28660, AT1G28670, AT1G29050, AT1G29195, AT1G29290, AT1G29330, AT1G29430, AT1G29440, AT1G29450, AT1G29460, AT1G29500, AT1G29510, AT1G29600, AT1G29640, AT1G29660, AT1G29715, AT1G30040, AT1G30100, AT1G30135, AT1G30240, AT1G30260, AT1G30320, AT1G30520, AT1G30620, AT1G30814, AT1G30840, AT1G30850, AT1G31120, AT1G31173, AT1G31290, AT1G31355, AT1G31550, AT1G31820, AT1G31835, AT1G31900, AT1G31920, AT1G31950, AT1G32560, AT1G32640, AT1G32730, AT1G32740, AT1G32870, AT1G32910, AT1G32960, AT1G33055, AT1G33110, AT1G33240, AT1G33260, AT1G33600, AT1G33770, AT1G33811, AT1G34180, AT1G34315, AT1G34420, AT1G35140, AT1G35210, AT1G36940, AT1G42980, AT1G43160, AT1G43245, AT1G43710, AT1G43910, AT1G44170, AT1G44350, AT1G44900, AT1G45145, AT1G47510, AT1G47890, AT1G48000, AT1G48100, AT1G48260, AT1G48315, AT1G48320, AT1G48370, AT1G48480, AT1G48780, AT1G49010, AT1G49050, AT1G49200, AT1G49230, AT1G49450, AT1G49520, AT1G50040, AT1G50180, AT1G50260, AT1G50590, AT1G50640, AT1G50732, AT1G51140, AT1G51400, AT1G51402, AT1G51660, AT1G51760, AT1G51780, AT1G51850, AT1G51920, AT1G51940, AT1G52030, AT1G52190, AT1G52230, AT1G52315, AT1G52565, AT1G52690, AT1G52710, AT1G52720, AT1G52750, AT1G52760, AT1G52770, AT1G52800, AT1G52827, AT1G52855, AT1G52890, AT1G52905, AT1G53070, AT1G53230, AT1G53233, AT1G53320, AT1G53410, AT1G53470, AT1G53560, AT1G53620, AT1G53760, AT1G53830, AT1G54030, AT1G54095, AT1G54100, AT1G54120, AT1G54130, AT1G54570, AT1G54730, AT1G54740, AT1G54820, AT1G54890, AT1G55330, AT1G55370, AT1G55610, AT1G56220, AT1G56580, AT1G56720, AT1G57560, AT1G57610, AT1G57630, AT1G57650, AT1G57943, AT1G58225, AT1G58270, AT1G58360, AT1G59640, AT1G59740, AT1G59950, AT1G60190, AT1G60270, AT1G60390, AT1G60830, AT1G60860, AT1G61065, AT1G61110, AT1G61120, AT1G61140, AT1G61215, AT1G61240, AT1G61255, AT1G61260, AT1G61300, AT1G61340, AT1G61500, AT1G61610, AT1G61640, AT1G61795, AT1G61890, AT1G62520, AT1G62790, AT1G62910, AT1G63080, AT1G63245, AT1G63260, AT1G63400, AT1G63530, AT1G63570, AT1G63720, AT1G63880, AT1G64320, AT1G64380, AT1G64610, AT1G64620, AT1G64625, AT1G64660, AT1G64670, AT1G65295, AT1G65500, AT1G65610, AT1G65845, AT1G66090, AT1G66170, AT1G66180, AT1G66280, AT1G66550, AT1G66590, AT1G66600, AT1G66725, AT1G66760, AT1G66780, AT1G66810, AT1G66920, AT1G66940, AT1G67070, AT1G67420, AT1G67590, AT1G68190, AT1G68200, AT1G68250, AT1G68340, AT1G68350, AT1G68390, AT1G68500, AT1G68520, AT1G68620, AT1G68780, AT1G68840, AT1G68935, AT1G68940, AT1G69260, AT1G69360, AT1G69480, AT1G69600, AT1G69610, AT1G69780, AT1G69790, AT1G69840, AT1G69870, AT1G69930, AT1G70100, AT1G70220, AT1G70300, AT1G70590, AT1G70640, AT1G70690, AT1G70700, AT1G70810, AT1G70940, AT1G71030, AT1G71100, AT1G71690, AT1G71697, AT1G71970, AT1G72060, AT1G72070, AT1G72120, AT1G72210, AT1G72240, AT1G72270, AT1G72330, AT1G72416, AT1G72430, AT1G72450, AT1G72520, AT1G72600, AT1G72610, AT1G72645, AT1G72680, AT1G72690, AT1G72700, AT1G72770, AT1G72890, AT1G72900, AT1G72910, AT1G72920, AT1G72940, AT1G73010, AT1G73110, AT1G73390, AT1G73480, AT1G73500, AT1G73690, AT1G73805, AT1G73810, AT1G73830, AT1G73890, AT1G73965, AT1G74080, AT1G74100, AT1G74200, AT1G74670, AT1G74710, AT1G74930, AT1G74940, AT1G74950, AT1G75020, AT1G75090, AT1G75120, AT1G75150, AT1G75220, AT1G75250, AT1G75370, AT1G75388, AT1G75390, 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AT4G18440, AT4G18540, AT4G18670, AT4G18760, AT4G18950, AT4G18970, AT4G19090, AT4G19170, AT4G19370, AT4G19420, AT4G19530, AT4G19870, AT4G20000, AT4G20140, AT4G20260, AT4G20362, AT4G20430, AT4G20830, AT4G20970, AT4G21060, AT4G21120, AT4G21200, AT4G21215, AT4G21390, AT4G21440, AT4G21445, AT4G21570, AT4G21680, AT4G21780, AT4G21790, AT4G21830, AT4G21850, AT4G21870, AT4G22070, AT4G22560, AT4G22590, AT4G22592, AT4G22620, AT4G22690, AT4G22710, AT4G22758, AT4G23050, AT4G23060, AT4G23290, AT4G23310, AT4G23400, AT4G23420, AT4G23450, AT4G23600, AT4G24010, AT4G24026, AT4G24030, AT4G24040, AT4G24110, AT4G24190, AT4G24275, AT4G24340, AT4G24380, AT4G24570, AT4G24960, AT4G25390, AT4G25433, AT4G25480, AT4G25670, AT4G25672, AT4G25690, AT4G25692, AT4G26060, AT4G26070, AT4G26080, AT4G26120, AT4G26470, AT4G26760, AT4G26810, AT4G27140, AT4G27300, AT4G27350, AT4G27410, AT4G27440, AT4G27590, AT4G27730, AT4G27830, AT4G27860, AT4G27870, AT4G28085, AT4G28088, AT4G28140, AT4G28150, AT4G28160, AT4G28162, AT4G28290, AT4G28300, AT4G28310, AT4G28350, AT4G29310, AT4G29740, AT4G29930, AT4G29950, AT4G30110, AT4G30180, AT4G30210, AT4G30410, AT4G30430, AT4G30450, AT4G30460, AT4G30470, AT4G30530, AT4G31060, AT4G31330, AT4G31780, AT4G31800, AT4G31870, AT4G31875, AT4G31890, AT4G32280, AT4G32400, AT4G32450, AT4G32980, AT4G33000, AT4G33010, AT4G33050, AT4G33467, AT4G33560, AT4G33666, AT4G34200, AT4G34220, AT4G34360, AT4G34588, AT4G34590, AT4G34650, AT4G34710, AT4G34760, AT4G34770, AT4G34790, AT4G34860, AT4G34970, AT4G34980, AT4G35060, AT4G35110, AT4G35160, AT4G35170, AT4G35180, AT4G35320, AT4G35480, AT4G35550, AT4G35560, AT4G35590, AT4G35600, AT4G35630, AT4G35720, AT4G35770, AT4G36010, AT4G36110, AT4G36220, AT4G36380, AT4G36410, AT4G36500, AT4G36540, AT4G36690, AT4G36700, AT4G36780, AT4G36820, AT4G36900, AT4G36950, AT4G36988, AT4G36990, AT4G37030, AT4G37090, AT4G37180, AT4G37370, AT4G37390, AT4G37409, AT4G37410, AT4G37700, AT4G37760, AT4G37800, AT4G37850, AT4G37925, AT4G37990, AT4G38000, AT4G38080, AT4G38400, AT4G38410, AT4G38700, AT4G38810, AT4G38840, AT4G38860, AT4G38940, AT4G38950, AT4G39030, AT4G39320, AT4G39360, AT4G39404, AT4G39610, AT4G39670, AT4G39740, AT4G39780, AT4G39980, AT5G01050, AT5G01100, AT5G01200, AT5G01210, AT5G01215, AT5G01380, AT5G01500, AT5G01560, AT5G01640, AT5G01820, AT5G01840, AT5G01850, AT5G01900, AT5G01930, AT5G02020, AT5G02170, AT5G02260, AT5G02320, AT5G02400, AT5G02440, AT5G02460, AT5G02540, AT5G02760, AT5G03030, AT5G03120, AT5G03150, AT5G03210, AT5G03350, AT5G03552, AT5G03610, AT5G03668, AT5G03670, AT5G03830, AT5G03890, AT5G04230, AT5G04250, AT5G04340, AT5G04720, AT5G04760, AT5G04770, AT5G04860, AT5G05140, AT5G05410, AT5G05460, AT5G05590, AT5G05600, AT5G05890, AT5G05965, AT5G06090, AT5G06250, AT5G06690, AT5G06750, AT5G06760, AT5G06980, AT5G06990, AT5G07010, AT5G07070, AT5G07150, AT5G07152, AT5G07440, AT5G07570, AT5G07580, AT5G07590, AT5G08130, AT5G08640, AT5G08790, AT5G09430, AT5G09440, AT5G09500, AT5G09730, AT5G09980, AT5G10150, AT5G10250, AT5G10260, AT5G10300, AT5G10340, AT5G10530, AT5G10625, AT5G10690, AT5G10720, AT5G10770, AT5G11070, AT5G11160, AT5G11260, AT5G11610, AT5G11650, AT5G11670, AT5G11860, AT5G11870, AT5G12340, AT5G12880, AT5G12900, AT5G13060, AT5G13080, AT5G13220, AT5G13320, AT5G13330, AT5G13730, AT5G13740, AT5G13760, AT5G13800, AT5G13820, AT5G13990, AT5G14350, AT5G14510, AT5G14760, AT5G14920, AT5G15030, AT5G15160, AT5G15190, AT5G15240, AT5G15350, AT5G15580, AT5G15770, AT5G15948, AT5G15950, AT5G15970, AT5G16000, AT5G16030, AT5G16170, AT5G16360, AT5G16450, AT5G16530, AT5G16830, AT5G17450, AT5G17460, AT5G17490, AT5G17760, AT5G17780, AT5G17850, AT5G17860, AT5G18030, AT5G18080, AT5G18270, AT5G18290, AT5G18660, AT5G19100, AT5G19110, AT5G19160, AT5G19190, AT5G19230, AT5G19440, AT5G19450, AT5G19810, AT5G19930, AT5G19970, AT5G20180, AT5G20190, AT5G20410, AT5G20450, AT5G20635, AT5G21222, AT5G21280, AT5G21930, AT5G21950, AT5G22060, AT5G22110, AT5G22390, AT5G22500, AT5G22540, AT5G22630, AT5G22880, AT5G22920, AT5G22930, AT5G23170, AT5G23210, AT5G23240, AT5G23280, AT5G23480, AT5G23590, AT5G23820, AT5G23950, AT5G24000, AT5G24010, AT5G24080, AT5G24090, AT5G24150, AT5G24155, AT5G24240, AT5G24280, AT5G24290, AT5G24470, AT5G24490, AT5G24540, AT5G24570, AT5G24770, AT5G24780, AT5G24910, AT5G25130, AT5G25190, AT5G25210, AT5G25250, AT5G25260, AT5G25620, AT5G25630, AT5G26010, AT5G26170, AT5G26260, AT5G26340, AT5G26690, AT5G26700, AT5G26731, AT5G26920, AT5G27060, AT5G27150, AT5G27520, AT5G27610, AT5G27930, AT5G27950, AT5G28020, AT5G28237, AT5G28490, AT5G29000, AT5G33280, AT5G35580, AT5G35732, AT5G35750, AT5G35790, AT5G38005, AT5G38130, AT5G38140, AT5G38280, AT5G38410, AT5G38420, AT5G38430, AT5G38710, AT5G38895, AT5G39050, AT5G39090, AT5G39320, AT5G39530, AT5G39610, AT5G39660, AT5G39680, AT5G39865, AT5G40150, AT5G40210, AT5G40390, AT5G40540, AT5G41050, AT5G41180, AT5G41280, AT5G41315, AT5G41550, AT5G41560, AT5G41600, AT5G41610, AT5G41612, AT5G41730, AT5G41740, AT5G41761, AT5G42380, AT5G42650, AT5G42900, AT5G43150, AT5G43160, AT5G43170, AT5G43380, AT5G43400, AT5G43700, AT5G44020, AT5G44050, AT5G44130, AT5G44210, AT5G44260, AT5G44460, AT5G44569, AT5G44570, AT5G44585, AT5G44600, AT5G44635, AT5G44650, AT5G44680, AT5G44990, AT5G45000, AT5G45110, AT5G45130, AT5G45520, AT5G45630, AT5G45650, AT5G45790, AT5G46110, AT5G46270, AT5G46280, AT5G46440, AT5G46690, AT5G47130, AT5G47220, AT5G47230, AT5G47240, AT5G47730, AT5G48320, AT5G48360, AT5G48670, AT5G48910, AT5G49215, AT5G49280, AT5G49390, AT5G49480, AT5G49525, AT5G49730, AT5G49740, AT5G50360, AT5G50450, AT5G50760, AT5G50940, AT5G51060, AT5G51070, AT5G51380, AT5G51550, AT5G51560, AT5G51590, AT5G51670, AT5G51790, AT5G51830, AT5G51970, AT5G52050, AT5G52100, AT5G52280, AT5G52300, AT5G52310, AT5G52510, AT5G52570, AT5G52660, AT5G52720, AT5G52730, AT5G52750, AT5G52760, AT5G52830, AT5G52882, AT5G52900, AT5G52910, AT5G53110, AT5G53120, AT5G53170, AT5G53200, AT5G53290, AT5G53360, AT5G53588, AT5G53590, AT5G53710, AT5G53760, AT5G54040, AT5G54100, AT5G54130, AT5G54165, AT5G54190, AT5G54470, AT5G54630, AT5G54670, AT5G54700, AT5G54730, AT5G54940, AT5G55090, AT5G55120, AT5G55180, AT5G55400, AT5G55410, AT5G55530, AT5G55700, AT5G56100, AT5G56220, AT5G56580, AT5G56750, AT5G56760, AT5G56840, AT5G56850, AT5G56870, AT5G56880, AT5G56970, AT5G57050, AT5G57260, AT5G57310, AT5G57390, AT5G57500, AT5G57510, AT5G57550, AT5G57560, AT5G57630, AT5G57660, AT5G57780, AT5G57900, AT5G58150, AT5G58390, AT5G58620, AT5G58700, AT5G59050, AT5G59080, AT5G59090, AT5G59220, AT5G59340, AT5G59480, AT5G59490, AT5G59510, AT5G59540, AT5G59580, AT5G59590, AT5G59750, AT5G59780, AT5G59820, AT5G59900, AT5G59970, AT5G60100, AT5G60490, AT5G60790, AT5G60800, AT5G60850, AT5G60860, AT5G60870, AT5G60890, AT5G61000, AT5G61160, AT5G61390, AT5G61590, AT5G61660, AT5G61810, AT5G61820, AT5G61865, AT5G61890, AT5G61960, AT5G62020, AT5G62070, AT5G62150, AT5G62170, AT5G62430, AT5G62470, AT5G62730, AT5G63130, AT5G63350, AT5G63410, AT5G63450, AT5G63480, AT5G63800, AT5G63970, AT5G64040, AT5G64120, AT5G64170, AT5G64260, AT5G64330, AT5G64410, AT5G64530, AT5G64630, AT5G64700, AT5G64710, AT5G64750, AT5G64810, AT5G64880, AT5G64890, AT5G65140, AT5G65280, AT5G65300, AT5G65350, AT5G65360, AT5G65380, AT5G65600, AT5G65660, AT5G65730, AT5G65890, AT5G66005, AT5G66400, AT5G66490, AT5G66520, AT5G66640, AT5G66650, AT5G66770, AT5G66880, AT5G66890, AT5G66910, AT5G67020, AT5G67080, AT5G67100, AT5G67160, AT5G67180, AT5G67190, AT5G67210, AT5G67300, AT5G67310, AT5G67340, AT5G67350, AT5G67410, AT5G67480, ATCG00020, ATCG00065, ATCG00070, ATCG00140, ATCG00150, ATCG00160, ATCG00270, ATCG00280, ATCG00300, ATCG00330, ATCG00440, ATCG00450, ATCG00490, ATCG00520, ATCG00550, ATCG00580, ATCG00690, ATCG00700, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00950, ATCG01000, ATCG01010, ATCG01050, ATCG01080, ATCG01090, ATCG01150, ATCG01180, ATCG01200, ATCG01210, ATMG00020, ATMG00060, ATMG00280, ATMG00670
## 73 NA
## 74 NA
## 75 AT1G01030, AT1G01120, AT1G01300, AT1G01370, AT1G01610, AT1G01620, AT1G01720, AT1G01900, AT1G02205, AT1G02220, AT1G02310, AT1G02360, AT1G02400, AT1G02460, AT1G02470, AT1G02920, AT1G02930, AT1G03020, AT1G03210, AT1G03850, AT1G04220, AT1G04730, AT1G04980, AT1G04990, AT1G07150, AT1G07370, AT1G07610, AT1G08200, AT1G08450, AT1G08630, AT1G09080, AT1G09200, AT1G09420, AT1G09500, AT1G09530, AT1G09950, AT1G10070, AT1G10370, AT1G10530, AT1G10560, AT1G10760, AT1G10770, AT1G11720, AT1G11925, AT1G12290, AT1G12420, AT1G13420, AT1G13520, AT1G13740, AT1G13820, AT1G13920, AT1G14120, AT1G14880, AT1G15080, AT1G15100, AT1G15125, AT1G15170, AT1G15180, AT1G15310, AT1G15380, AT1G15670, AT1G15890, AT1G16370, AT1G16410, AT1G16850, AT1G17020, AT1G17147, AT1G17420, AT1G17460, AT1G17940, AT1G17990, AT1G18020, AT1G19020, AT1G19570, AT1G19640, AT1G19650, AT1G19670, AT1G19680, AT1G19970, AT1G20070, AT1G20450, AT1G20823, AT1G21070, AT1G21120, AT1G21520, AT1G21525, AT1G21740, AT1G22550, AT1G22770, AT1G25425, AT1G25450, AT1G25500, AT1G26290, AT1G26380, AT1G26420, AT1G26730, AT1G26770, AT1G26800, AT1G26920, AT1G27030, AT1G27330, AT1G27350, AT1G27730, AT1G28010, AT1G28050, AT1G28360, AT1G29330, AT1G30240, AT1G30420, AT1G30860, AT1G31710, AT1G32210, AT1G32860, AT1G32910, AT1G33030, AT1G33055, AT1G33950, AT1G33960, AT1G34210, AT1G35670, AT1G36622, AT1G43160, AT1G44350, AT1G44900, AT1G47890, AT1G48100, AT1G48260, AT1G49450, AT1G49650, AT1G50520, AT1G50640, AT1G51090, AT1G51500, AT1G51780, AT1G51850, AT1G51860, AT1G52030, AT1G52200, AT1G52720, AT1G53170, AT1G53620, AT1G54010, AT1G54030, AT1G54040, AT1G54095, AT1G55260, AT1G55490, AT1G55790, AT1G56010, AT1G56120, AT1G56580, AT1G58180, AT1G58225, AT1G58270, AT1G58590, AT1G59740, AT1G60190, AT1G60270, AT1G61110, AT1G61160, AT1G61340, AT1G61810, AT1G61820, AT1G62440, AT1G62790, AT1G62975, AT1G63040, AT1G63460, AT1G64150, AT1G64380, AT1G64390, AT1G64620, AT1G64670, AT1G65470, AT1G65490, AT1G65845, AT1G65860, AT1G66280, AT1G66345, AT1G66960, AT1G67420, AT1G67520, AT1G67630, AT1G67810, AT1G67980, AT1G68350, AT1G68500, AT1G69140, AT1G69295, AT1G69490, AT1G69530, AT1G69543, AT1G69600, AT1G69720, AT1G69870, AT1G70300, AT1G70640, AT1G70700, AT1G71970, AT1G72040, AT1G72060, AT1G72070, AT1G72140, AT1G72180, AT1G73210, AT1G73390, AT1G73480, AT1G73500, AT1G73590, AT1G74370, AT1G74590, AT1G74950, AT1G75170, AT1G75370, AT1G75580, AT1G75800, AT1G76610, AT1G76790, AT1G76960, AT1G77145, AT1G77680, AT1G77920, AT1G78060, AT1G78070, AT1G78080, AT1G78260, AT1G78290, AT1G78380, AT1G78780, AT1G79170, AT1G79450, AT1G79570, AT1G79960, AT1G80060, AT1G80120, AT1G80460, AT1G80580, AT1G80820, AT1G80840, AT1G80850, AT2G01818, AT2G01830, AT2G01890, AT2G02060, AT2G02350, AT2G02360, AT2G02930, AT2G03760, AT2G04080, AT2G06050, AT2G06255, AT2G07690, AT2G14560, AT2G16630, AT2G17040, AT2G17450, AT2G18660, AT2G18969, AT2G18970, AT2G19190, AT2G20880, AT2G21140, AT2G21185, AT2G21187, AT2G22080, AT2G22200, AT2G22330, AT2G22770, AT2G23130, AT2G23170, AT2G23340, AT2G23760, AT2G23840, AT2G24040, AT2G24210, AT2G24240, AT2G24390, AT2G25130, AT2G25625, AT2G26560, AT2G27389, AT2G27390, AT2G27510, AT2G27660, AT2G27820, AT2G27830, AT2G27920, AT2G28110, AT2G28740, AT2G28790, AT2G28940, AT2G29350, AT2G29440, AT2G29450, AT2G29470, AT2G29670, AT2G29710, AT2G29730, AT2G29950, AT2G30040, AT2G30360, AT2G30362, AT2G30480, AT2G30540, AT2G30820, AT2G30830, AT2G31020, AT2G31380, AT2G31730, AT2G31865, AT2G32160, AT2G32235, AT2G32460, AT2G32510, AT2G32680, AT2G32990, AT2G33380, AT2G33480, AT2G33520, AT2G34070, AT2G34080, AT2G35210, AT2G35710, AT2G35960, AT2G36380, AT2G36590, AT2G36790, AT2G36792, AT2G36830, AT2G36885, AT2G37040, AT2G37170, AT2G37180, AT2G37590, AT2G37620, AT2G37640, AT2G37750, AT2G38530, AT2G38540, AT2G38750, AT2G38980, AT2G39020, AT2G39250, AT2G39320, AT2G39980, AT2G40110, AT2G40550, AT2G40620, AT2G40880, AT2G41082, AT2G41170, AT2G41250, AT2G41380, AT2G41440, AT2G41540, AT2G41730, AT2G42150, AT2G42530, AT2G42540, AT2G42600, AT2G43000, AT2G43018, AT2G43020, AT2G43150, AT2G43535, AT2G43550, AT2G44370, AT2G44380, AT2G44578, AT2G44640, AT2G44840, AT2G44980, AT2G45470, AT2G45510, AT2G45960, AT2G46370, AT2G46380, AT2G46630, AT2G46930, AT2G47180, AT2G47260, AT2G47485, AT2G47840, AT2G47950, AT3G02020, AT3G02510, AT3G02820, AT3G03190, AT3G03470, AT3G03610, AT3G03650, AT3G03780, AT3G03980, AT3G04000, AT3G04010, AT3G04070, AT3G04720, AT3G05640, AT3G05740, AT3G05800, AT3G05810, AT3G05870, AT3G06020, AT3G06030, AT3G06035, AT3G06500, AT3G07320, AT3G07580, AT3G07600, AT3G07800, AT3G08030, AT3G08670, AT3G09940, AT3G11000, AT3G11090, AT3G11170, AT3G11210, AT3G11470, AT3G11480, AT3G12120, AT3G12145, AT3G12220, AT3G12230, AT3G12920, AT3G13230, AT3G13790, AT3G14067, AT3G14280, AT3G14700, AT3G14740, AT3G14870, AT3G15210, AT3G15800, AT3G15950, AT3G16400, AT3G16420, AT3G16450, AT3G16460, AT3G16500, AT3G17510, AT3G17860, AT3G18250, AT3G18730, AT3G19390, AT3G19660, AT3G19710, AT3G19720, AT3G19820, AT3G20340, AT3G21670, AT3G21780, AT3G22275, AT3G22460, AT3G22560, AT3G23740, AT3G23810, AT3G24518, AT3G24520, AT3G25700, AT3G25760, AT3G25770, AT3G25780, AT3G26060, AT3G26210, AT3G26220, AT3G26230, AT3G26440, AT3G26470, AT3G26500, AT3G26520, AT3G27170, AT3G27180, AT3G27960, AT3G28220, AT3G28540, AT3G28570, AT3G28600, AT3G28850, AT3G28950, AT3G43250, AT3G43270, AT3G44300, AT3G44490, AT3G44870, AT3G45140, AT3G45290, AT3G45330, AT3G45860, AT3G45930, AT3G46658, AT3G46660, AT3G47500, AT3G47750, AT3G47830, AT3G47836, AT3G47960, AT3G48350, AT3G48450, AT3G48460, AT3G48490, AT3G48510, AT3G48520, AT3G48630, AT3G48640, AT3G48720, AT3G49110, AT3G49130, AT3G49540, AT3G49870, AT3G50260, AT3G50410, AT3G50550, AT3G50620, AT3G50760, AT3G51090, AT3G51250, AT3G51330, AT3G51750, AT3G51920, AT3G52290, AT3G52630, AT3G52748, AT3G53150, AT3G53235, AT3G53370, AT3G53420, AT3G54150, AT3G54820, AT3G54830, AT3G54920, AT3G54950, AT3G55290, AT3G55500, AT3G56260, AT3G56270, AT3G56500, AT3G56870, AT3G56891, AT3G57020, AT3G57157, AT3G57240, AT3G57550, AT3G57760, AT3G59050, AT3G59052, AT3G59100, AT3G59710, AT3G59940, AT3G59970, AT3G60220, AT3G60490, AT3G60540, AT3G61198, AT3G61390, AT3G61420, AT3G61430, AT3G61490, AT3G61630, AT3G61920, AT3G62590, AT3G62600, AT3G62700, AT3G62860, AT3G63030, AT3G63200, AT4G00360, AT4G00400, AT4G00430, AT4G01026, AT4G01030, AT4G01230, AT4G01500, AT4G02050, AT4G02060, AT4G02110, AT4G02520, AT4G04620, AT4G04740, AT4G04840, AT4G05010, AT4G05020, AT4G05100, AT4G06534, AT4G06536, AT4G06744, AT4G08170, AT4G08770, AT4G08870, AT4G09750, AT4G10290, AT4G10390, AT4G10860, AT4G11070, AT4G11300, AT4G11320, AT4G12000, AT4G12005, AT4G12030, AT4G13770, AT4G13860, AT4G13900, AT4G14020, AT4G14040, AT4G14440, AT4G14800, AT4G15100, AT4G15210, AT4G15530, AT4G15610, AT4G15770, AT4G15920, AT4G16730, AT4G16740, AT4G17340, AT4G17470, AT4G17550, AT4G17660, AT4G18360, AT4G18440, AT4G19370, AT4G19420, AT4G19870, AT4G20000, AT4G21060, AT4G21200, AT4G21440, AT4G21570, AT4G21610, AT4G21730, AT4G21780, AT4G21790, AT4G22010, AT4G22520, AT4G23060, AT4G23260, AT4G23271, AT4G23420, AT4G23500, AT4G23600, AT4G24510, AT4G24972, AT4G25000, AT4G25070, AT4G25433, AT4G25700, AT4G25830, AT4G25900, AT4G26700, AT4G27350, AT4G27410, AT4G27520, AT4G27590, AT4G27745, AT4G27870, AT4G28140, AT4G28150, AT4G28310, AT4G28390, AT4G29740, AT4G30180, AT4G30210, AT4G30440, AT4G30530, AT4G30640, AT4G31780, AT4G31870, AT4G32290, AT4G32780, AT4G32785, AT4G32870, AT4G33220, AT4G33355, AT4G33467, AT4G33925, AT4G33970, AT4G34060, AT4G34135, AT4G34200, AT4G34290, AT4G34650, AT4G35090, AT4G35100, AT4G35160, AT4G35320, AT4G35480, AT4G35550, AT4G35560, AT4G35720, AT4G36010, AT4G36360, AT4G36710, AT4G36780, AT4G36900, AT4G37310, AT4G37390, AT4G37410, AT4G37520, AT4G37760, AT4G37990, AT4G38160, AT4G38770, AT4G38810, AT4G39190, AT4G39330, AT4G39350, AT4G39580, AT4G39980, AT5G01210, AT5G01215, AT5G01550, AT5G01610, AT5G01760, AT5G01840, AT5G02170, AT5G02460, AT5G02502, AT5G02690, AT5G03030, AT5G03285, AT5G04180, AT5G04200, AT5G04250, AT5G04530, AT5G04770, AT5G05270, AT5G05300, AT5G05440, AT5G06310, AT5G06570, AT5G06980, AT5G07010, AT5G07030, AT5G07650, AT5G07660, AT5G07690, AT5G07700, AT5G07760, AT5G07820, AT5G07990, AT5G08020, AT5G08640, AT5G09290, AT5G09430, AT5G09440, AT5G09500, AT5G10390, AT5G10400, AT5G10440, AT5G10720, AT5G11920, AT5G11950, AT5G12860, AT5G13220, AT5G13400, AT5G14200, AT5G14420, AT5G14565, AT5G14570, AT5G14700, AT5G15030, AT5G15190, AT5G15240, AT5G15860, AT5G15870, AT5G16290, AT5G16350, AT5G16600, AT5G17330, AT5G17460, AT5G17490, AT5G17520, AT5G19100, AT5G19110, AT5G19730, AT5G20270, AT5G20400, AT5G20740, AT5G20960, AT5G21280, AT5G22500, AT5G22740, AT5G22880, AT5G23010, AT5G23420, AT5G23820, AT5G24030, AT5G24080, AT5G24150, AT5G24155, AT5G24205, AT5G24206, AT5G24230, AT5G24240, AT5G24280, AT5G24420, AT5G24770, AT5G24780, AT5G24910, AT5G24920, AT5G25450, AT5G25451, AT5G25910, AT5G26260, AT5G26731, AT5G27150, AT5G27930, AT5G28290, AT5G37600, AT5G37740, AT5G38005, AT5G38120, AT5G38130, AT5G38900, AT5G39320, AT5G39520, AT5G39680, AT5G39950, AT5G40010, AT5G40240, AT5G40380, AT5G40390, AT5G40460, AT5G40540, AT5G40690, AT5G40720, AT5G41120, AT5G41160, AT5G41315, AT5G41590, AT5G41600, AT5G41880, AT5G42530, AT5G42650, AT5G42830, AT5G42900, AT5G43170, AT5G43910, AT5G44050, AT5G44210, AT5G44635, AT5G45500, AT5G45950, AT5G46230, AT5G46500, AT5G47220, AT5G47240, AT5G47330, AT5G48180, AT5G48290, AT5G49690, AT5G50460, AT5G52050, AT5G52720, AT5G52882, AT5G52910, AT5G52990, AT5G53200, AT5G53760, AT5G53820, AT5G54490, AT5G54500, AT5G54840, AT5G55090, AT5G55180, AT5G55460, AT5G55530, AT5G56050, AT5G56120, AT5G56760, AT5G56870, AT5G56880, AT5G57010, AT5G57100, AT5G57260, AT5G57550, AT5G57800, AT5G58480, AT5G58840, AT5G58900, AT5G59030, AT5G59050, AT5G59080, AT5G59090, AT5G59130, AT5G59340, AT5G59480, AT5G59530, AT5G59662, AT5G59760, AT5G59890, AT5G60850, AT5G60860, AT5G60870, AT5G60890, AT5G61000, AT5G61070, AT5G61160, AT5G61460, AT5G61490, AT5G61810, AT5G61890, AT5G62350, AT5G62360, AT5G62430, AT5G62470, AT5G62670, AT5G62690, AT5G62700, AT5G63135, AT5G63240, AT5G63450, AT5G63550, AT5G64000, AT5G64170, AT5G64260, AT5G64280, AT5G64700, AT5G64710, AT5G64740, AT5G64750, AT5G65280, AT5G65350, AT5G65360, AT5G65660, AT5G66052, AT5G66053, AT5G66170, AT5G66650, AT5G67070, AT5G67100, AT5G67180, AT5G67190, AT5G67300, AT5G67480, AT5G67600
## 76 NA
## 77 NA
## 78 AT1G01030, AT1G01120, AT1G01300, AT1G01370, AT1G01470, AT1G01610, AT1G01620, AT1G01720, AT1G01900, AT1G02205, AT1G02220, AT1G02310, AT1G02360, AT1G02400, AT1G02460, AT1G02920, AT1G02930, AT1G03020, AT1G03210, AT1G03850, AT1G04220, AT1G04730, AT1G04980, AT1G07150, AT1G07370, AT1G07610, AT1G08200, AT1G08450, AT1G08630, AT1G09080, AT1G09200, AT1G09420, AT1G09500, AT1G09530, AT1G09950, AT1G10070, AT1G10370, AT1G10530, AT1G10560, AT1G10760, AT1G10770, AT1G11720, AT1G12290, AT1G12420, AT1G13420, AT1G13520, AT1G13740, AT1G13820, AT1G13930, AT1G14120, AT1G14880, AT1G15080, AT1G15100, AT1G15125, AT1G15170, AT1G15180, AT1G15310, AT1G15380, AT1G15670, AT1G15890, AT1G16370, AT1G16410, AT1G16850, AT1G17020, AT1G17420, AT1G17460, AT1G17940, AT1G17990, AT1G18020, AT1G19020, AT1G19570, AT1G19640, AT1G19650, AT1G19670, AT1G19680, AT1G19970, AT1G20030, AT1G20440, AT1G20450, AT1G20823, AT1G21070, AT1G21120, AT1G21520, AT1G21525, AT1G21740, AT1G22550, AT1G22770, AT1G25275, AT1G25425, AT1G25450, AT1G26380, AT1G26420, AT1G26730, AT1G26770, AT1G26800, AT1G27640, AT1G27730, AT1G28010, AT1G28050, AT1G28360, AT1G29330, AT1G30420, AT1G30860, AT1G31710, AT1G32210, AT1G32860, AT1G32910, AT1G33030, AT1G33055, AT1G33950, AT1G33960, AT1G34210, AT1G35670, AT1G36622, AT1G43160, AT1G44350, AT1G44900, AT1G47890, AT1G48100, AT1G48260, AT1G49650, AT1G50520, AT1G50640, AT1G51090, AT1G51500, AT1G51780, AT1G51850, AT1G51860, AT1G52030, AT1G52200, AT1G53170, AT1G53620, AT1G54010, AT1G54030, AT1G54040, AT1G55260, AT1G55490, AT1G55790, AT1G56010, AT1G56120, AT1G58180, AT1G58270, AT1G58590, AT1G59740, AT1G60190, AT1G60270, AT1G61110, AT1G61340, AT1G61810, AT1G61820, AT1G62440, AT1G62790, AT1G62975, AT1G63040, AT1G63460, AT1G64150, AT1G64380, AT1G64390, AT1G64620, AT1G64670, AT1G65470, AT1G65860, AT1G66280, AT1G66345, AT1G66960, AT1G67420, AT1G67520, AT1G67630, AT1G67810, AT1G67980, AT1G68500, AT1G69140, AT1G69295, AT1G69490, AT1G69530, AT1G69543, AT1G69600, AT1G69720, AT1G69870, AT1G70300, AT1G70640, AT1G70700, AT1G72040, AT1G72060, AT1G72070, AT1G72140, AT1G72180, AT1G73390, AT1G73480, AT1G73500, AT1G73590, AT1G74370, AT1G74590, AT1G74950, AT1G75170, AT1G75370, AT1G75580, AT1G75800, AT1G75830, AT1G76610, AT1G76790, AT1G77145, AT1G77680, AT1G77920, AT1G78060, AT1G78080, AT1G78290, AT1G78380, AT1G79570, AT1G79960, AT1G80060, AT1G80120, AT1G80460, AT1G80530, AT1G80580, AT1G80820, AT1G80840, AT1G80850, AT2G01830, AT2G01890, AT2G02060, AT2G02350, AT2G02360, AT2G02930, AT2G03760, AT2G04080, AT2G06050, AT2G06255, AT2G07690, AT2G14560, AT2G14610, AT2G16630, AT2G17040, AT2G17450, AT2G18660, AT2G19190, AT2G20880, AT2G21140, AT2G21187, AT2G22080, AT2G22200, AT2G22330, AT2G22770, AT2G23130, AT2G23170, AT2G23340, AT2G23760, AT2G23840, AT2G24040, AT2G24210, AT2G24240, AT2G25130, AT2G26560, AT2G27389, AT2G27510, AT2G27660, AT2G27820, AT2G27830, AT2G27920, AT2G28110, AT2G28740, AT2G28790, AT2G28940, AT2G29350, AT2G29440, AT2G29450, AT2G29470, AT2G29670, AT2G29710, AT2G29730, AT2G29950, AT2G30040, AT2G30360, AT2G30362, AT2G30540, AT2G30830, AT2G31020, AT2G31380, AT2G31730, AT2G31865, AT2G32160, AT2G32240, AT2G32460, AT2G32510, AT2G32680, AT2G32990, AT2G33380, AT2G33480, AT2G34070, AT2G34080, AT2G35210, AT2G35710, AT2G35960, AT2G36380, AT2G36590, AT2G36790, AT2G36792, AT2G36830, AT2G36885, AT2G37040, AT2G37170, AT2G37180, AT2G37590, AT2G37620, AT2G37640, AT2G38530, AT2G38540, AT2G38750, AT2G38980, AT2G39020, AT2G39250, AT2G39320, AT2G39980, AT2G40110, AT2G40550, AT2G40620, AT2G40880, AT2G41082, AT2G41250, AT2G41380, AT2G41440, AT2G41540, AT2G41730, AT2G42150, AT2G42530, AT2G42540, AT2G42600, AT2G43000, AT2G43018, AT2G43020, AT2G43150, AT2G43535, AT2G44370, AT2G44380, AT2G44840, AT2G44980, AT2G45470, AT2G45510, AT2G45960, AT2G46370, AT2G46380, AT2G46630, AT2G46930, AT2G47180, AT2G47260, AT2G47485, AT2G47840, AT3G02020, AT3G02820, AT3G03190, AT3G03470, AT3G03610, AT3G03650, AT3G03780, AT3G03980, AT3G04000, AT3G04010, AT3G04070, AT3G04630, AT3G04720, AT3G05640, AT3G05740, AT3G05800, AT3G05870, AT3G06020, AT3G06030, AT3G06500, AT3G07320, AT3G07600, AT3G07800, AT3G08030, AT3G08670, AT3G09940, AT3G10320, AT3G10985, AT3G11000, AT3G11170, AT3G11210, AT3G11470, AT3G11480, AT3G12120, AT3G12145, AT3G12220, AT3G12230, AT3G12920, AT3G13230, AT3G13790, AT3G14067, AT3G14700, AT3G14740, AT3G14870, AT3G15210, AT3G15800, AT3G15950, AT3G16400, AT3G16420, AT3G16450, AT3G16460, AT3G16500, AT3G17510, AT3G17860, AT3G18730, AT3G19390, AT3G19710, AT3G19720, AT3G19820, AT3G20340, AT3G21670, AT3G21780, AT3G22275, AT3G22460, AT3G22560, AT3G23810, AT3G24518, AT3G24520, AT3G25700, AT3G25760, AT3G25770, AT3G25780, AT3G26060, AT3G26210, AT3G26220, AT3G26230, AT3G26440, AT3G26520, AT3G27170, AT3G27180, AT3G27960, AT3G28220, AT3G28540, AT3G28570, AT3G28600, AT3G28850, AT3G43270, AT3G44300, AT3G44490, AT3G44870, AT3G45140, AT3G45290, AT3G45330, AT3G45860, AT3G45930, AT3G46658, AT3G46660, AT3G47500, AT3G47750, AT3G47830, AT3G47960, AT3G48350, AT3G48450, AT3G48460, AT3G48520, AT3G48720, AT3G49110, AT3G49130, AT3G49540, AT3G49870, AT3G50260, AT3G50410, AT3G50620, AT3G50760, AT3G51330, AT3G51660, AT3G51920, AT3G52630, AT3G52748, AT3G53150, AT3G53370, AT3G53420, AT3G54150, AT3G54820, AT3G54830, AT3G54920, AT3G54950, AT3G55290, AT3G55500, AT3G56270, AT3G56891, AT3G57020, AT3G57157, AT3G57240, AT3G57550, AT3G57760, AT3G59050, AT3G59052, AT3G59100, AT3G59710, AT3G59940, AT3G59970, AT3G60220, AT3G60490, AT3G60540, AT3G61198, AT3G61390, AT3G61420, AT3G61430, AT3G61490, AT3G61630, AT3G61900, AT3G61920, AT3G62590, AT3G62600, AT3G62700, AT3G62860, AT3G63030, AT3G63200, AT4G00360, AT4G00400, AT4G00430, AT4G01026, AT4G01030, AT4G01230, AT4G01500, AT4G02050, AT4G02060, AT4G02110, AT4G02520, AT4G04620, AT4G04740, AT4G04840, AT4G05020, AT4G05100, AT4G06534, AT4G06744, AT4G08170, AT4G08770, AT4G08870, AT4G09750, AT4G10390, AT4G11070, AT4G11320, AT4G12000, AT4G12030, AT4G12410, AT4G13770, AT4G13900, AT4G14020, AT4G14040, AT4G14440, AT4G14800, AT4G15100, AT4G15210, AT4G15530, AT4G15610, AT4G15770, AT4G15920, AT4G16730, AT4G16740, AT4G17340, AT4G17470, AT4G17550, AT4G17660, AT4G18360, AT4G18440, AT4G19420, AT4G19870, AT4G21060, AT4G21200, AT4G21440, AT4G21570, AT4G21610, AT4G21730, AT4G21790, AT4G22010, AT4G22520, AT4G22620, AT4G23060, AT4G23260, AT4G23271, AT4G23420, AT4G23500, AT4G23600, AT4G24510, AT4G24960, AT4G24972, AT4G25000, AT4G25070, AT4G25433, AT4G25700, AT4G25830, AT4G25900, AT4G26700, AT4G27410, AT4G27520, AT4G27590, AT4G27870, AT4G28140, AT4G28390, AT4G29740, AT4G30180, AT4G30210, AT4G30440, AT4G30530, AT4G30640, AT4G31780, AT4G31870, AT4G32290, AT4G32780, AT4G32785, AT4G32870, AT4G33220, AT4G33355, AT4G33467, AT4G33925, AT4G33970, AT4G34060, AT4G34135, AT4G34200, AT4G34290, AT4G34650, AT4G35090, AT4G35100, AT4G35160, AT4G35480, AT4G35550, AT4G35560, AT4G35720, AT4G36010, AT4G36360, AT4G36710, AT4G36780, AT4G36900, AT4G37310, AT4G37390, AT4G37410, AT4G37520, AT4G37760, AT4G37990, AT4G38080, AT4G38160, AT4G38410, AT4G38770, AT4G38810, AT4G39330, AT4G39350, AT4G39580, AT4G39980, AT5G01210, AT5G01215, AT5G01550, AT5G01760, AT5G01840, AT5G02170, AT5G02460, AT5G02520, AT5G03030, AT5G03285, AT5G04180, AT5G04200, AT5G04250, AT5G04530, AT5G04770, AT5G05270, AT5G05300, AT5G05440, AT5G06310, AT5G06570, AT5G06980, AT5G07010, AT5G07030, AT5G07650, AT5G07660, AT5G07690, AT5G07700, AT5G07760, AT5G07990, AT5G08020, AT5G08640, AT5G09290, AT5G09430, AT5G09440, AT5G09500, AT5G10390, AT5G10400, AT5G10440, AT5G10720, AT5G11920, AT5G11950, AT5G12860, AT5G13220, AT5G13400, AT5G14200, AT5G14420, AT5G14565, AT5G14570, AT5G14700, AT5G15030, AT5G15240, AT5G15860, AT5G15870, AT5G15960, AT5G16290, AT5G16350, AT5G16600, AT5G17330, AT5G17460, AT5G17490, AT5G17520, AT5G19100, AT5G19110, AT5G19730, AT5G20270, AT5G20400, AT5G20740, AT5G20960, AT5G21280, AT5G22500, AT5G22740, AT5G22880, AT5G23010, AT5G23420, AT5G23820, AT5G24030, AT5G24080, AT5G24150, AT5G24155, AT5G24205, AT5G24206, AT5G24230, AT5G24240, AT5G24280, AT5G24420, AT5G24770, AT5G24780, AT5G24910, AT5G24920, AT5G25450, AT5G25451, AT5G25910, AT5G26260, AT5G27150, AT5G27930, AT5G28290, AT5G28646, AT5G37600, AT5G37740, AT5G38005, AT5G38120, AT5G38130, AT5G38900, AT5G39320, AT5G39680, AT5G39950, AT5G40010, AT5G40240, AT5G40380, AT5G40390, AT5G40460, AT5G40540, AT5G40690, AT5G41120, AT5G41160, AT5G41315, AT5G41590, AT5G41600, AT5G41880, AT5G42650, AT5G42830, AT5G42900, AT5G43170, AT5G43910, AT5G44050, AT5G44210, AT5G44420, AT5G44635, AT5G45950, AT5G47220, AT5G47240, AT5G47330, AT5G48180, AT5G48290, AT5G49690, AT5G50460, AT5G52050, AT5G52310, AT5G52720, AT5G52882, AT5G52910, AT5G52990, AT5G53200, AT5G53760, AT5G54490, AT5G54500, AT5G54840, AT5G55090, AT5G55180, AT5G55460, AT5G55530, AT5G56120, AT5G56760, AT5G56870, AT5G57100, AT5G57260, AT5G57550, AT5G57800, AT5G58480, AT5G58840, AT5G58900, AT5G59030, AT5G59080, AT5G59090, AT5G59130, AT5G59340, AT5G59480, AT5G59530, AT5G59662, AT5G59890, AT5G60530, AT5G60850, AT5G60860, AT5G60870, AT5G60890, AT5G61000, AT5G61070, AT5G61160, AT5G61460, AT5G61810, AT5G61890, AT5G62350, AT5G62360, AT5G62430, AT5G62470, AT5G62670, AT5G62690, AT5G62700, AT5G63135, AT5G63450, AT5G63550, AT5G64000, AT5G64170, AT5G64280, AT5G64700, AT5G64710, AT5G64740, AT5G64750, AT5G65280, AT5G65350, AT5G65360, AT5G65660, AT5G66053, AT5G66170, AT5G66650, AT5G67070, AT5G67100, AT5G67180, AT5G67190, AT5G67210, AT5G67300, AT5G67480, AT5G67600
## 79 NA
## 80 NA
## 81 AT1G01030, AT1G01120, AT1G01300, AT1G01370, AT1G01470, AT1G01610, AT1G01620, AT1G01720, AT1G01900, AT1G02205, AT1G02220, AT1G02310, AT1G02360, AT1G02400, AT1G02405, AT1G02460, AT1G02470, AT1G02920, AT1G02930, AT1G03020, AT1G03210, AT1G03850, AT1G04220, AT1G04730, AT1G04980, AT1G04990, AT1G07150, AT1G07370, AT1G07610, AT1G08200, AT1G08450, AT1G08630, AT1G09080, AT1G09200, AT1G09420, AT1G09500, AT1G09530, AT1G09950, AT1G10070, AT1G10370, AT1G10530, AT1G10560, AT1G10760, AT1G10770, AT1G11720, AT1G11925, AT1G12290, AT1G13420, AT1G13740, AT1G13820, AT1G13920, AT1G13930, AT1G14120, AT1G14880, AT1G15080, AT1G15100, AT1G15125, AT1G15170, AT1G15180, AT1G15310, AT1G15380, AT1G15670, AT1G15890, AT1G16370, AT1G16410, AT1G16850, AT1G17020, AT1G17147, AT1G17420, AT1G17460, AT1G17940, AT1G17990, AT1G18020, AT1G19570, AT1G19640, AT1G19650, AT1G19670, AT1G19680, AT1G19970, AT1G20030, AT1G20070, AT1G20440, AT1G20450, AT1G20823, AT1G21070, AT1G21120, AT1G21520, AT1G21525, AT1G21740, AT1G22550, AT1G22770, AT1G25275, AT1G25422, AT1G25425, AT1G25450, AT1G25500, AT1G26290, AT1G26380, AT1G26420, AT1G26730, AT1G26770, AT1G26800, AT1G26920, AT1G27330, AT1G27350, AT1G27640, AT1G27730, AT1G28010, AT1G28050, AT1G28360, AT1G29330, AT1G30240, AT1G30420, AT1G30860, AT1G31710, AT1G32210, AT1G32860, AT1G32910, AT1G33030, AT1G33055, AT1G33950, AT1G33960, AT1G34210, AT1G35670, AT1G36622, AT1G43160, AT1G44350, AT1G44900, AT1G47890, AT1G48100, AT1G48260, AT1G49450, AT1G49650, AT1G50520, AT1G50640, AT1G51090, AT1G51500, AT1G51780, AT1G51850, AT1G51860, AT1G51920, AT1G52030, AT1G52200, AT1G52720, AT1G53110, AT1G53170, AT1G53620, AT1G54010, AT1G54030, AT1G54040, AT1G54095, AT1G55260, AT1G55490, AT1G55790, AT1G56010, AT1G56120, AT1G56580, AT1G58180, AT1G58225, AT1G58270, AT1G58590, AT1G59740, AT1G60190, AT1G60270, AT1G61110, AT1G61160, AT1G61340, AT1G61810, AT1G61820, AT1G62440, AT1G62790, AT1G62975, AT1G63040, AT1G63460, AT1G64150, AT1G64380, AT1G64390, AT1G64620, AT1G64670, AT1G65470, AT1G65486, AT1G65490, AT1G65845, AT1G65860, AT1G66280, AT1G66345, AT1G66960, AT1G67420, AT1G67520, AT1G67630, AT1G67810, AT1G67980, AT1G68350, AT1G68500, AT1G69140, AT1G69295, AT1G69490, AT1G69530, AT1G69543, AT1G69600, AT1G69720, AT1G69870, AT1G70300, AT1G70640, AT1G70700, AT1G71970, AT1G72040, AT1G72060, AT1G72070, AT1G72140, AT1G72180, AT1G73210, AT1G73390, AT1G73480, AT1G73500, AT1G73590, AT1G74370, AT1G74590, AT1G74950, AT1G75170, AT1G75370, AT1G75800, AT1G75830, AT1G76610, AT1G76790, AT1G76960, AT1G77145, AT1G77680, AT1G77920, AT1G78060, AT1G78070, AT1G78080, AT1G78260, AT1G78290, AT1G78380, AT1G78780, AT1G79170, AT1G79450, AT1G79570, AT1G79960, AT1G80060, AT1G80120, AT1G80460, AT1G80530, AT1G80580, AT1G80840, AT1G80850, AT2G01818, AT2G01830, AT2G01890, AT2G02060, AT2G02350, AT2G02360, AT2G02930, AT2G03760, AT2G04080, AT2G04515, AT2G06050, AT2G07690, AT2G14560, AT2G14610, AT2G16630, AT2G17040, AT2G17450, AT2G18660, AT2G18969, AT2G18970, AT2G19190, AT2G20880, AT2G21140, AT2G21185, AT2G21187, AT2G22080, AT2G22200, AT2G22330, AT2G22770, AT2G23130, AT2G23170, AT2G23340, AT2G23760, AT2G23840, AT2G24040, AT2G24210, AT2G24240, AT2G24390, AT2G25130, AT2G25625, AT2G26560, AT2G27389, AT2G27510, AT2G27660, AT2G27820, AT2G27830, AT2G27920, AT2G28110, AT2G28740, AT2G28790, AT2G28940, AT2G29350, AT2G29440, AT2G29450, AT2G29470, AT2G29670, AT2G29710, AT2G29730, AT2G29950, AT2G30040, AT2G30360, AT2G30362, AT2G30480, AT2G30540, AT2G30820, AT2G30830, AT2G31020, AT2G31380, AT2G31730, AT2G31865, AT2G32160, AT2G32235, AT2G32240, AT2G32460, AT2G32510, AT2G32680, AT2G32990, AT2G33380, AT2G33480, AT2G33520, AT2G34070, AT2G34080, AT2G35210, AT2G35710, AT2G35960, AT2G36380, AT2G36590, AT2G36790, AT2G36792, AT2G36815, AT2G36830, AT2G36885, AT2G37040, AT2G37170, AT2G37180, AT2G37590, AT2G37620, AT2G37640, AT2G37750, AT2G38530, AT2G38540, AT2G38750, AT2G38980, AT2G39020, AT2G39250, AT2G39320, AT2G39980, AT2G40110, AT2G40550, AT2G40620, AT2G40880, AT2G41082, AT2G41170, AT2G41250, AT2G41380, AT2G41440, AT2G41540, AT2G41730, AT2G42150, AT2G42530, AT2G42540, AT2G42600, AT2G43000, AT2G43018, AT2G43020, AT2G43150, AT2G43535, AT2G44370, AT2G44380, AT2G44578, AT2G44640, AT2G44840, AT2G44980, AT2G45470, AT2G45510, AT2G45960, AT2G46370, AT2G46630, AT2G46930, AT2G47180, AT2G47260, AT2G47485, AT2G47840, AT2G47950, AT3G02020, AT3G02510, AT3G02820, AT3G03190, AT3G03470, AT3G03610, AT3G03650, AT3G03780, AT3G03980, AT3G04000, AT3G04010, AT3G04070, AT3G04630, AT3G04720, AT3G05640, AT3G05740, AT3G05800, AT3G05810, AT3G05870, AT3G06020, AT3G06030, AT3G06035, AT3G06500, AT3G07320, AT3G07580, AT3G07600, AT3G07800, AT3G08030, AT3G08670, AT3G09032, AT3G09940, AT3G10985, AT3G11000, AT3G11090, AT3G11170, AT3G11210, AT3G11470, AT3G11480, AT3G12120, AT3G12145, AT3G12220, AT3G12230, AT3G12920, AT3G13230, AT3G13433, AT3G13437, AT3G13790, AT3G14067, AT3G14280, AT3G14700, AT3G14740, AT3G14870, AT3G15210, AT3G15518, AT3G15800, AT3G15950, AT3G16400, AT3G16420, AT3G16450, AT3G16460, AT3G16500, AT3G17120, AT3G17510, AT3G17860, AT3G18250, AT3G18730, AT3G19390, AT3G19615, AT3G19660, AT3G19710, AT3G19720, AT3G19820, AT3G20340, AT3G21670, AT3G21780, AT3G22275, AT3G22410, AT3G22415, AT3G22460, AT3G22560, AT3G23740, AT3G23810, AT3G24518, AT3G24520, AT3G25700, AT3G25760, AT3G25770, AT3G25780, AT3G26060, AT3G26210, AT3G26220, AT3G26230, AT3G26440, AT3G26470, AT3G26520, AT3G27170, AT3G27180, AT3G27960, AT3G28220, AT3G28540, AT3G28570, AT3G28600, AT3G28850, AT3G29240, AT3G43250, AT3G43270, AT3G44300, AT3G44490, AT3G44870, AT3G45140, AT3G45290, AT3G45330, AT3G45860, AT3G45930, AT3G46658, AT3G46660, AT3G47500, AT3G47750, AT3G47830, AT3G47836, AT3G47960, AT3G48350, AT3G48450, AT3G48460, AT3G48490, AT3G48520, AT3G48640, AT3G48720, AT3G49110, AT3G49130, AT3G49540, AT3G49870, AT3G50260, AT3G50410, AT3G50550, AT3G50620, AT3G50760, AT3G51090, AT3G51250, AT3G51330, AT3G51660, AT3G51750, AT3G51920, AT3G52290, AT3G52630, AT3G52748, AT3G53150, AT3G53370, AT3G53420, AT3G54150, AT3G54820, AT3G54830, AT3G54920, AT3G54950, AT3G55290, AT3G55500, AT3G56260, AT3G56270, AT3G56500, AT3G56870, AT3G56891, AT3G57020, AT3G57157, AT3G57240, AT3G57550, AT3G57760, AT3G59050, AT3G59052, AT3G59100, AT3G59710, AT3G59940, AT3G59970, AT3G60220, AT3G60490, AT3G60540, AT3G61198, AT3G61390, AT3G61420, AT3G61430, AT3G61490, AT3G61630, AT3G61900, AT3G61920, AT3G62590, AT3G62600, AT3G62700, AT3G62860, AT3G63030, AT3G63200, AT4G00360, AT4G00400, AT4G00430, AT4G01026, AT4G01030, AT4G01230, AT4G01500, AT4G02050, AT4G02060, AT4G02110, AT4G02360, AT4G02520, AT4G04620, AT4G04740, AT4G04840, AT4G05010, AT4G05020, AT4G05100, AT4G06534, AT4G06536, AT4G06744, AT4G08170, AT4G08770, AT4G08870, AT4G10290, AT4G10390, AT4G11070, AT4G11320, AT4G12000, AT4G12005, AT4G12030, AT4G12410, AT4G13770, AT4G13900, AT4G14020, AT4G14040, AT4G14440, AT4G14800, AT4G15100, AT4G15210, AT4G15530, AT4G15610, AT4G15770, AT4G15920, AT4G16730, AT4G16740, AT4G17340, AT4G17470, AT4G17550, AT4G17660, AT4G18360, AT4G18440, AT4G19370, AT4G19420, AT4G19870, AT4G20000, AT4G21060, AT4G21200, AT4G21440, AT4G21570, AT4G21610, AT4G21730, AT4G21780, AT4G21790, AT4G22010, AT4G22520, AT4G22620, AT4G23060, AT4G23260, AT4G23271, AT4G23420, AT4G23500, AT4G23600, AT4G24510, AT4G24960, AT4G24972, AT4G25000, AT4G25070, AT4G25433, AT4G25700, AT4G25830, AT4G25900, AT4G26700, AT4G27350, AT4G27410, AT4G27520, AT4G27590, AT4G27745, AT4G27870, AT4G28140, AT4G28150, AT4G28310, AT4G28390, AT4G29740, AT4G30180, AT4G30210, AT4G30440, AT4G30530, AT4G30640, AT4G31780, AT4G31870, AT4G32290, AT4G32785, AT4G32870, AT4G33220, AT4G33355, AT4G33467, AT4G33925, AT4G33970, AT4G34060, AT4G34135, AT4G34200, AT4G34290, AT4G34650, AT4G35090, AT4G35100, AT4G35160, AT4G35320, AT4G35480, AT4G35550, AT4G35560, AT4G35720, AT4G36010, AT4G36360, AT4G36710, AT4G36780, AT4G36900, AT4G37310, AT4G37390, AT4G37409, AT4G37410, AT4G37520, AT4G37760, AT4G37990, AT4G38080, AT4G38160, AT4G38410, AT4G38770, AT4G38810, AT4G39190, AT4G39330, AT4G39350, AT4G39580, AT4G39980, AT5G01210, AT5G01215, AT5G01550, AT5G01610, AT5G01760, AT5G01840, AT5G02170, AT5G02460, AT5G02502, AT5G02520, AT5G02690, AT5G03030, AT5G03285, AT5G04180, AT5G04200, AT5G04250, AT5G04530, AT5G04770, AT5G05270, AT5G05300, AT5G05440, AT5G06310, AT5G06570, AT5G06980, AT5G07010, AT5G07030, AT5G07650, AT5G07660, AT5G07690, AT5G07700, AT5G07760, AT5G07820, AT5G07990, AT5G08020, AT5G08640, AT5G08760, AT5G09290, AT5G09430, AT5G09440, AT5G09500, AT5G10390, AT5G10400, AT5G10440, AT5G10720, AT5G11920, AT5G11950, AT5G12860, AT5G13220, AT5G13400, AT5G14200, AT5G14420, AT5G14565, AT5G14570, AT5G15030, AT5G15190, AT5G15240, AT5G15860, AT5G15870, AT5G16290, AT5G16350, AT5G16600, AT5G17330, AT5G17460, AT5G17490, AT5G17520, AT5G19100, AT5G19110, AT5G19730, AT5G20270, AT5G20400, AT5G20740, AT5G20960, AT5G21280, AT5G22500, AT5G22740, AT5G22880, AT5G23010, AT5G23420, AT5G23820, AT5G24030, AT5G24080, AT5G24150, AT5G24155, AT5G24205, AT5G24206, AT5G24230, AT5G24240, AT5G24280, AT5G24420, AT5G24770, AT5G24780, AT5G24910, AT5G24920, AT5G25450, AT5G25451, AT5G25910, AT5G26260, AT5G26731, AT5G27150, AT5G27930, AT5G28290, AT5G28646, AT5G37600, AT5G37740, AT5G38005, AT5G38120, AT5G38130, AT5G38900, AT5G39320, AT5G39520, AT5G39680, AT5G39950, AT5G40010, AT5G40240, AT5G40380, AT5G40390, AT5G40540, AT5G40690, AT5G40720, AT5G41120, AT5G41160, AT5G41315, AT5G41600, AT5G41880, AT5G42530, AT5G42650, AT5G42830, AT5G42900, AT5G43170, AT5G43910, AT5G44050, AT5G44210, AT5G44420, AT5G44565, AT5G44635, AT5G45500, AT5G45950, AT5G46230, AT5G46500, AT5G47220, AT5G47240, AT5G47330, AT5G48180, AT5G48290, AT5G49690, AT5G50460, AT5G52050, AT5G52310, AT5G52720, AT5G52882, AT5G52910, AT5G52990, AT5G53200, AT5G53760, AT5G53820, AT5G54300, AT5G54490, AT5G54500, AT5G54840, AT5G55090, AT5G55180, AT5G55460, AT5G55530, AT5G56050, AT5G56120, AT5G56760, AT5G56870, AT5G56880, AT5G57010, AT5G57100, AT5G57260, AT5G57550, AT5G57800, AT5G58480, AT5G58840, AT5G58900, AT5G59030, AT5G59050, AT5G59080, AT5G59090, AT5G59130, AT5G59340, AT5G59480, AT5G59530, AT5G59662, AT5G59890, AT5G60530, AT5G60850, AT5G60860, AT5G60870, AT5G60890, AT5G61000, AT5G61070, AT5G61160, AT5G61460, AT5G61490, AT5G61810, AT5G61890, AT5G62350, AT5G62430, AT5G62470, AT5G62670, AT5G62690, AT5G62700, AT5G63135, AT5G63240, AT5G63450, AT5G63550, AT5G64000, AT5G64170, AT5G64190, AT5G64260, AT5G64280, AT5G64700, AT5G64710, AT5G64740, AT5G64750, AT5G65280, AT5G65350, AT5G65360, AT5G65660, AT5G66052, AT5G66053, AT5G66170, AT5G66590, AT5G66650, AT5G67070, AT5G67100, AT5G67180, AT5G67190, AT5G67210, AT5G67300, AT5G67350, AT5G67480, AT5G67600
## 82 NA
## 83 NA
## 84 AT3G21870, ATCG01310
## 85 NA
## 86 NA
## 87 AT3G21870, ATCG01310
## 88 NA
## 89 NA
## 90 AT3G21870, ATCG01310
## 91 NA
## 92 NA
## 93 AT1G01060, AT1G01190, AT1G01390, AT1G01420, AT1G01520, AT1G01600, AT1G01610, AT1G02710, AT1G02820, AT1G03050, AT1G03055, AT1G03300, AT1G03360, AT1G04220, AT1G04250, AT1G04530, AT1G04550, AT1G04770, AT1G05560, AT1G05562, AT1G05680, AT1G07010, AT1G07180, AT1G07490, AT1G08610, AT1G09180, AT1G10460, AT1G10960, AT1G12330, AT1G12370, AT1G13030, AT1G13080, AT1G13650, AT1G13730, AT1G13800, AT1G13810, AT1G14150, AT1G14345, AT1G14840, AT1G15290, AT1G15510, AT1G15550, AT1G15870, AT1G16350, AT1G16390, AT1G16730, AT1G17050, AT1G18800, AT1G19140, AT1G19150, AT1G19450, AT1G19700, AT1G21500, AT1G22590, AT1G22850, AT1G23100, AT1G23410, AT1G23740, AT1G26220, AT1G26390, AT1G27120, AT1G27480, AT1G28010, AT1G29600, AT1G29660, AT1G30960, AT1G31920, AT1G31950, AT1G32440, AT1G32760, AT1G32900, AT1G33170, AT1G33410, AT1G42550, AT1G42970, AT1G44000, AT1G44446, AT1G48100, AT1G48480, AT1G48570, AT1G49010, AT1G49430, AT1G49490, AT1G49660, AT1G50840, AT1G51080, AT1G51100, AT1G51310, AT1G52830, AT1G53090, AT1G54500, AT1G55260, AT1G55960, AT1G58520, AT1G59700, AT1G61300, AT1G62170, AT1G62180, AT1G62630, AT1G62720, AT1G62750, AT1G62760, AT1G62960, AT1G63250, AT1G64220, AT1G64500, AT1G64600, AT1G64670, AT1G64680, AT1G64770, AT1G64780, AT1G64880, AT1G64900, AT1G64970, AT1G65060, AT1G65070, AT1G65080, AT1G65490, AT1G65920, AT1G66130, AT1G66330, AT1G66540, AT1G66725, AT1G66840, AT1G67590, AT1G67750, AT1G68440, AT1G69200, AT1G70000, AT1G70250, AT1G70580, AT1G71850, AT1G72040, AT1G72270, AT1G72770, AT1G73320, AT1G73600, AT1G73602, AT1G73870, AT1G73890, AT1G74070, AT1G74290, AT1G74560, AT1G75100, AT1G75280, AT1G76240, AT1G77580, AT1G77855, AT1G78290, AT1G78370, AT1G78510, AT1G78930, AT1G80270, AT1G80760, AT2G01280, AT2G01890, AT2G02150, AT2G02230, AT2G03550, AT2G04030, AT2G04039, AT2G04790, AT2G05160, AT2G11890, AT2G14880, AT2G15000, AT2G15020, AT2G17972, AT2G18230, AT2G18330, AT2G18560, AT2G19670, AT2G20020, AT2G20585, AT2G21185, AT2G21187, AT2G21320, AT2G21330, AT2G22240, AT2G23290, AT2G23340, AT2G23430, AT2G23672, AT2G24120, AT2G24440, AT2G24540, AT2G24545, AT2G24580, AT2G24762, AT2G24820, AT2G25530, AT2G25680, AT2G26080, AT2G26692, AT2G27420, AT2G28790, AT2G29090, AT2G30100, AT2G30150, AT2G30520, AT2G30760, AT2G31380, AT2G31750, AT2G31751, AT2G32150, AT2G32530, AT2G32540, AT2G33250, AT2G35760, AT2G35950, AT2G36000, AT2G36590, AT2G36750, AT2G36800, AT2G37240, AT2G37460, AT2G37630, AT2G37970, AT2G38750, AT2G38760, AT2G39730, AT2G41050, AT2G41250, AT2G41290, AT2G41660, AT2G42710, AT2G42975, AT2G43100, AT2G43650, AT2G43710, AT2G45340, AT2G46670, AT2G46790, AT2G46810, AT2G46830, AT2G47370, AT2G47450, AT2G47485, AT2G47630, AT3G01060, AT3G01140, AT3G01142, AT3G01180, AT3G01440, AT3G02830, AT3G04140, AT3G04950, AT3G06145, AT3G06520, AT3G06750, AT3G06920, AT3G07310, AT3G07750, AT3G07770, AT3G09160, AT3G09190, AT3G09600, AT3G09650, AT3G10040, AT3G10110, AT3G10525, AT3G11090, AT3G11110, AT3G12320, AT3G13470, AT3G14810, AT3G14900, AT3G15354, AT3G15540, AT3G15850, AT3G15990, AT3G16520, AT3G17160, AT3G17170, AT3G17640, AT3G17840, AT3G18750, AT3G19000, AT3G19440, AT3G19450, AT3G19480, AT3G21390, AT3G21460, AT3G21890, AT3G22120, AT3G22121, AT3G22150, AT3G22235, AT3G23090, AT3G23210, AT3G23510, AT3G23930, AT3G23940, AT3G24170, AT3G24190, AT3G24460, AT3G25030, AT3G25670, AT3G26570, AT3G27350, AT3G28040, AT3G28540, AT3G30460, AT3G43960, AT3G44020, AT3G44300, AT3G46090, AT3G46900, AT3G47070, AT3G47420, AT3G47430, AT3G48280, AT3G48560, AT3G48660, AT3G48690, AT3G49240, AT3G49470, AT3G49570, AT3G50685, AT3G51420, AT3G51750, AT3G51895, AT3G52720, AT3G52920, AT3G53700, AT3G53830, AT3G53920, AT3G54220, AT3G54390, AT3G54490, AT3G54500, AT3G54720, AT3G54900, AT3G56080, AT3G56160, AT3G56290, AT3G56300, AT3G56330, AT3G56570, AT3G57020, AT3G57040, AT3G57180, AT3G57190, AT3G57400, AT3G58840, AT3G58990, AT3G59220, AT3G59250, AT3G59400, AT3G61220, AT3G61880, AT3G63200, AT3G63530, AT4G00050, AT4G00165, AT4G00360, AT4G01037, AT4G01070, AT4G01080, AT4G01535, AT4G02630, AT4G02990, AT4G03600, AT4G04020, AT4G04610, AT4G05110, AT4G09350, AT4G09650, AT4G10120, AT4G10600, AT4G10620, AT4G11100, AT4G11175, AT4G12390, AT4G12830, AT4G12880, AT4G12980, AT4G13800, AT4G14440, AT4G14690, AT4G15210, AT4G15248, AT4G15430, AT4G15480, AT4G15550, AT4G15810, AT4G16400, AT4G16410, AT4G16690, AT4G16980, AT4G17180, AT4G17680, AT4G17880, AT4G17970, AT4G19170, AT4G20090, AT4G20360, AT4G21990, AT4G23680, AT4G24540, AT4G24670, AT4G24700, AT4G25290, AT4G26600, AT4G26800, AT4G26850, AT4G27030, AT4G27700, AT4G28660, AT4G28700, AT4G28730, AT4G28740, AT4G28780, AT4G30470, AT4G30610, AT4G30960, AT4G31210, AT4G31390, AT4G31870, AT4G32770, AT4G33010, AT4G33560, AT4G34610, AT4G34630, AT4G35090, AT4G36580, AT4G36950, AT4G37650, AT4G37800, AT4G37925, AT4G38060, AT4G38680, AT4G38960, AT4G38970, AT4G39330, AT4G39470, AT4G39510, AT4G39800, AT5G01015, AT5G01075, AT5G01260, AT5G01410, AT5G01820, AT5G02050, AT5G02180, AT5G02230, AT5G02540, AT5G02830, AT5G03555, AT5G03760, AT5G05270, AT5G05580, AT5G06550, AT5G06790, AT5G08610, AT5G08720, AT5G09760, AT5G09840, AT5G10150, AT5G10470, AT5G12080, AT5G12110, AT5G13400, AT5G13730, AT5G13770, AT5G13920, AT5G14580, AT5G14610, AT5G14740, AT5G15845, AT5G15850, AT5G15948, AT5G15950, AT5G16340, AT5G16530, AT5G17050, AT5G17170, AT5G17300, AT5G18570, AT5G18670, AT5G19300, AT5G19730, AT5G19850, AT5G19970, AT5G20070, AT5G20220, AT5G20225, AT5G20380, AT5G21100, AT5G22390, AT5G22640, AT5G23070, AT5G23730, AT5G23750, AT5G23760, AT5G24120, AT5G24150, AT5G24165, AT5G24280, AT5G24380, AT5G24580, AT5G24660, AT5G24850, AT5G25120, AT5G25130, AT5G25140, AT5G25590, AT5G25630, AT5G28500, AT5G38420, AT5G38430, AT5G39710, AT5G43630, AT5G43850, AT5G44190, AT5G44490, AT5G45800, AT5G46220, AT5G46580, AT5G47220, AT5G47360, AT5G47560, AT5G48030, AT5G48180, AT5G48850, AT5G48910, AT5G49100, AT5G49740, AT5G50100, AT5G51540, AT5G51720, AT5G52570, AT5G53170, AT5G53200, AT5G53970, AT5G54130, AT5G54470, AT5G54585, AT5G54610, AT5G54630, AT5G55570, AT5G55730, AT5G55740, AT5G55790, AT5G56850, AT5G56860, AT5G57030, AT5G57180, AT5G57240, AT5G58770, AT5G58870, AT5G59780, AT5G61030, AT5G61130, AT5G61350, AT5G61670, AT5G62130, AT5G62140, AT5G62370, AT5G63530, AT5G63630, AT5G63700, AT5G64170, AT5G64710, AT5G64840, AT5G64940, AT5G65380, AT5G65820, AT5G66270, AT5G66740, AT5G66960, AT5G67030, AT5G67370, AT5G67385, ATCG00330, ATCG00905, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01130, ATCG01170, ATCG01190, ATCG01300, ATCG01310
## 94 NA
## 95 NA
## 96 AT1G01060, AT1G01190, AT1G01390, AT1G01420, AT1G01520, AT1G01600, AT1G01610, AT1G02820, AT1G03050, AT1G03055, AT1G03300, AT1G03360, AT1G04220, AT1G04250, AT1G04530, AT1G04550, AT1G04770, AT1G05560, AT1G05562, AT1G05680, AT1G07010, AT1G07180, AT1G07490, AT1G09180, AT1G09820, AT1G09900, AT1G10460, AT1G10960, AT1G12330, AT1G12370, AT1G13080, AT1G13730, AT1G13800, AT1G13810, AT1G14150, AT1G14345, AT1G14840, AT1G15290, AT1G15510, AT1G15550, AT1G15870, AT1G16350, AT1G16390, AT1G17050, AT1G18800, AT1G19140, AT1G19150, AT1G19450, AT1G19700, AT1G21500, AT1G22590, AT1G23100, AT1G23410, AT1G23740, AT1G26220, AT1G26390, AT1G27120, AT1G27480, AT1G28010, AT1G29660, AT1G30960, AT1G31950, AT1G32440, AT1G32760, AT1G32900, AT1G33170, AT1G33410, AT1G42550, AT1G42970, AT1G44000, AT1G44446, AT1G48100, AT1G48480, AT1G48570, AT1G49010, AT1G49430, AT1G49490, AT1G49660, AT1G50840, AT1G51310, AT1G52830, AT1G53090, AT1G54500, AT1G55260, AT1G58520, AT1G59700, AT1G61300, AT1G62170, AT1G62180, AT1G62630, AT1G62720, AT1G62750, AT1G62760, AT1G62960, AT1G63250, AT1G64220, AT1G64500, AT1G64600, AT1G64670, AT1G64770, AT1G64780, AT1G64880, AT1G64900, AT1G64970, AT1G65060, AT1G65070, AT1G65080, AT1G65920, AT1G66130, AT1G66330, AT1G66540, AT1G66725, AT1G66840, AT1G67750, AT1G69200, AT1G70000, AT1G70250, AT1G70580, AT1G71850, AT1G72040, AT1G72270, AT1G72770, AT1G73320, AT1G73600, AT1G73602, AT1G73870, AT1G73890, AT1G74070, AT1G74290, AT1G74560, AT1G75100, AT1G75280, AT1G76240, AT1G77580, AT1G78290, AT1G78370, AT1G78510, AT1G78930, AT1G80270, AT1G80760, AT2G01280, AT2G01890, AT2G02150, AT2G02230, AT2G03550, AT2G04030, AT2G04039, AT2G11890, AT2G14880, AT2G18230, AT2G18330, AT2G18560, AT2G19670, AT2G20020, AT2G20585, AT2G21187, AT2G21320, AT2G21330, AT2G22240, AT2G23290, AT2G23340, AT2G23430, AT2G23672, AT2G24120, AT2G24440, AT2G24540, AT2G24545, AT2G24580, AT2G24762, AT2G24820, AT2G25530, AT2G25680, AT2G26080, AT2G26692, AT2G27420, AT2G28790, AT2G29090, AT2G30100, AT2G30150, AT2G30520, AT2G31380, AT2G31750, AT2G31751, AT2G32150, AT2G32530, AT2G32540, AT2G35760, AT2G35950, AT2G36000, AT2G36590, AT2G36750, AT2G36800, AT2G37240, AT2G37460, AT2G37630, AT2G37970, AT2G38750, AT2G38760, AT2G39730, AT2G41050, AT2G41250, AT2G41290, AT2G41660, AT2G42710, AT2G43100, AT2G43650, AT2G43710, AT2G45340, AT2G46670, AT2G46790, AT2G46810, AT2G46830, AT2G47450, AT2G47485, AT2G47630, AT3G01060, AT3G01140, AT3G01142, AT3G01180, AT3G01440, AT3G02830, AT3G04140, AT3G04950, AT3G06520, AT3G06750, AT3G06920, AT3G07750, AT3G07770, AT3G09190, AT3G09600, AT3G09650, AT3G10040, AT3G10110, AT3G10525, AT3G11110, AT3G12320, AT3G13470, AT3G14810, AT3G14900, AT3G15354, AT3G15540, AT3G15850, AT3G15990, AT3G16520, AT3G17170, AT3G17640, AT3G17840, AT3G18750, AT3G19000, AT3G19440, AT3G19450, AT3G19480, AT3G21390, AT3G21460, AT3G21890, AT3G22120, AT3G22121, AT3G22150, AT3G23090, AT3G23210, AT3G23510, AT3G23930, AT3G23940, AT3G24170, AT3G24190, AT3G24460, AT3G25030, AT3G25670, AT3G26570, AT3G28040, AT3G28540, AT3G30460, AT3G43960, AT3G44020, AT3G44300, AT3G46090, AT3G46900, AT3G47070, AT3G47420, AT3G47430, AT3G48280, AT3G48560, AT3G48690, AT3G49240, AT3G49470, AT3G51420, AT3G51895, AT3G52720, AT3G52920, AT3G53700, AT3G53920, AT3G54220, AT3G54390, AT3G54490, AT3G54500, AT3G54720, AT3G54900, AT3G56080, AT3G56160, AT3G56290, AT3G56300, AT3G56330, AT3G56570, AT3G57020, AT3G57040, AT3G57180, AT3G57190, AT3G57400, AT3G58840, AT3G58990, AT3G59220, AT3G59400, AT3G61220, AT3G61780, AT3G61880, AT3G63200, AT3G63530, AT4G00050, AT4G00165, AT4G00360, AT4G01037, AT4G01070, AT4G01080, AT4G02630, AT4G02990, AT4G04020, AT4G04610, AT4G05110, AT4G09350, AT4G09650, AT4G10120, AT4G10600, AT4G11175, AT4G12390, AT4G12830, AT4G12880, AT4G12980, AT4G14440, AT4G14690, AT4G15210, AT4G15248, AT4G15430, AT4G15480, AT4G15550, AT4G16690, AT4G17180, AT4G17680, AT4G17880, AT4G17970, AT4G19170, AT4G20090, AT4G20360, AT4G21990, AT4G23680, AT4G24540, AT4G24670, AT4G25290, AT4G26600, AT4G26800, AT4G26850, AT4G27030, AT4G27700, AT4G28660, AT4G28700, AT4G28730, AT4G28740, AT4G28780, AT4G30470, AT4G30610, AT4G30960, AT4G31210, AT4G31390, AT4G31870, AT4G32770, AT4G33010, AT4G34610, AT4G35090, AT4G36580, AT4G36950, AT4G37650, AT4G37800, AT4G37925, AT4G38680, AT4G38960, AT4G38970, AT4G39330, AT4G39510, AT4G39800, AT5G01075, AT5G01260, AT5G01410, AT5G01820, AT5G02050, AT5G02180, AT5G02230, AT5G02540, AT5G02830, AT5G03555, AT5G03760, AT5G05270, AT5G05580, AT5G06550, AT5G08610, AT5G08720, AT5G09760, AT5G09840, AT5G10470, AT5G12080, AT5G12110, AT5G13400, AT5G13730, AT5G13770, AT5G14580, AT5G14610, AT5G14740, AT5G15845, AT5G15850, AT5G15948, AT5G15950, AT5G16340, AT5G16530, AT5G17050, AT5G17170, AT5G17300, AT5G18570, AT5G18670, AT5G19300, AT5G19730, AT5G19850, AT5G20070, AT5G20220, AT5G20225, AT5G20380, AT5G21100, AT5G22390, AT5G22640, AT5G23070, AT5G23730, AT5G23760, AT5G24120, AT5G24150, AT5G24280, AT5G24380, AT5G24580, AT5G24660, AT5G24850, AT5G25120, AT5G25130, AT5G25140, AT5G25590, AT5G38420, AT5G38430, AT5G39710, AT5G43630, AT5G43850, AT5G44190, AT5G44490, AT5G45800, AT5G46220, AT5G46580, AT5G47220, AT5G47360, AT5G47560, AT5G48030, AT5G48180, AT5G48850, AT5G48910, AT5G49740, AT5G50100, AT5G51540, AT5G51720, AT5G52570, AT5G53170, AT5G53200, AT5G53970, AT5G54130, AT5G54470, AT5G54610, AT5G54630, AT5G55570, AT5G55730, AT5G55740, AT5G56850, AT5G56860, AT5G57030, AT5G57180, AT5G57240, AT5G58770, AT5G58870, AT5G59780, AT5G61030, AT5G61130, AT5G61350, AT5G61670, AT5G62130, AT5G62140, AT5G62370, AT5G63530, AT5G63630, AT5G63700, AT5G64170, AT5G64710, AT5G64840, AT5G64940, AT5G65380, AT5G65820, AT5G66740, AT5G66960, AT5G67030, AT5G67370, AT5G67385, ATCG00330, ATCG00905, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01130, ATCG01170, ATCG01190, ATCG01300, ATCG01310
## 97 NA
## 98 NA
## 99 AT1G01060, AT1G01190, AT1G01390, AT1G01420, AT1G01520, AT1G01600, AT1G01610, AT1G02710, AT1G02820, AT1G03050, AT1G03055, AT1G03300, AT1G03360, AT1G04220, AT1G04250, AT1G04530, AT1G04550, AT1G04660, AT1G04770, AT1G05560, AT1G05562, AT1G05680, AT1G07010, AT1G07180, AT1G07490, AT1G08610, AT1G09180, AT1G09820, AT1G09900, AT1G10460, AT1G10960, AT1G12330, AT1G12370, AT1G13030, AT1G13080, AT1G13650, AT1G13730, AT1G13800, AT1G14150, AT1G14345, AT1G14840, AT1G15290, AT1G15510, AT1G15550, AT1G15870, AT1G16350, AT1G16390, AT1G16730, AT1G17050, AT1G18800, AT1G19140, AT1G19150, AT1G19450, AT1G19700, AT1G21500, AT1G22590, AT1G22850, AT1G23100, AT1G23410, AT1G23740, AT1G24148, AT1G26220, AT1G26390, AT1G26761, AT1G27120, AT1G27480, AT1G28010, AT1G29600, AT1G29660, AT1G30960, AT1G31920, AT1G31950, AT1G32440, AT1G32760, AT1G32900, AT1G33170, AT1G33410, AT1G42550, AT1G42970, AT1G44000, AT1G44446, AT1G48100, AT1G48480, AT1G48570, AT1G49010, AT1G49430, AT1G49490, AT1G49660, AT1G50840, AT1G51080, AT1G51100, AT1G51310, AT1G52830, AT1G53090, AT1G54500, AT1G55260, AT1G55960, AT1G58520, AT1G59700, AT1G61300, AT1G62170, AT1G62180, AT1G62630, AT1G62720, AT1G62750, AT1G62760, AT1G62960, AT1G63250, AT1G64220, AT1G64500, AT1G64600, AT1G64670, AT1G64680, AT1G64770, AT1G64780, AT1G64880, AT1G64900, AT1G64970, AT1G65060, AT1G65070, AT1G65080, AT1G65490, AT1G65920, AT1G66130, AT1G66330, AT1G66540, AT1G66725, AT1G66840, AT1G67590, AT1G67750, AT1G68440, AT1G69200, AT1G70000, AT1G70250, AT1G70580, AT1G71850, AT1G72040, AT1G72270, AT1G72645, AT1G72770, AT1G73320, AT1G73600, AT1G73602, AT1G73870, AT1G73890, AT1G74070, AT1G74290, AT1G74560, AT1G75100, AT1G75280, AT1G76240, AT1G77580, AT1G77855, AT1G78290, AT1G78370, AT1G78510, AT1G78930, AT1G80270, AT1G80760, AT2G01280, AT2G01890, AT2G02150, AT2G02230, AT2G03550, AT2G04030, AT2G04039, AT2G04790, AT2G05160, AT2G11890, AT2G14880, AT2G15000, AT2G17972, AT2G18230, AT2G18330, AT2G18560, AT2G19670, AT2G20020, AT2G20585, AT2G21185, AT2G21187, AT2G21320, AT2G21330, AT2G22240, AT2G23290, AT2G23340, AT2G23430, AT2G23670, AT2G23672, AT2G24120, AT2G24440, AT2G24540, AT2G24545, AT2G24580, AT2G24762, AT2G24820, AT2G25530, AT2G25680, AT2G26080, AT2G26692, AT2G27420, AT2G28790, AT2G29090, AT2G30100, AT2G30150, AT2G30520, AT2G30760, AT2G31380, AT2G31750, AT2G31751, AT2G32150, AT2G32530, AT2G32540, AT2G33250, AT2G33855, AT2G35760, AT2G35950, AT2G36000, AT2G36590, AT2G36750, AT2G36800, AT2G37240, AT2G37460, AT2G37630, AT2G37970, AT2G38750, AT2G38760, AT2G39730, AT2G41050, AT2G41250, AT2G41290, AT2G41660, AT2G42710, AT2G42975, AT2G43100, AT2G43650, AT2G43710, AT2G45340, AT2G46670, AT2G46790, AT2G46810, AT2G46830, AT2G47370, AT2G47450, AT2G47485, AT2G47630, AT3G01060, AT3G01140, AT3G01142, AT3G01180, AT3G01440, AT3G02830, AT3G04140, AT3G04950, AT3G06145, AT3G06520, AT3G06750, AT3G06920, AT3G07310, AT3G07750, AT3G07770, AT3G09160, AT3G09162, AT3G09190, AT3G09600, AT3G09650, AT3G10040, AT3G10110, AT3G10525, AT3G11090, AT3G11110, AT3G12320, AT3G13470, AT3G14810, AT3G14900, AT3G15354, AT3G15540, AT3G15850, AT3G15990, AT3G16520, AT3G17160, AT3G17170, AT3G17640, AT3G17840, AT3G18750, AT3G19000, AT3G19440, AT3G19450, AT3G19480, AT3G21390, AT3G21460, AT3G21890, AT3G22120, AT3G22121, AT3G22150, AT3G22235, AT3G23090, AT3G23210, AT3G23510, AT3G23930, AT3G23940, AT3G24170, AT3G24190, AT3G24460, AT3G25030, AT3G25670, AT3G26570, AT3G27350, AT3G27415, AT3G27416, AT3G28040, AT3G28540, AT3G30460, AT3G43960, AT3G44020, AT3G44300, AT3G46090, AT3G46900, AT3G47070, AT3G47420, AT3G47430, AT3G48280, AT3G48560, AT3G48660, AT3G48690, AT3G49240, AT3G49470, AT3G50685, AT3G51420, AT3G51750, AT3G51895, AT3G52720, AT3G52920, AT3G53700, AT3G53920, AT3G54220, AT3G54390, AT3G54490, AT3G54500, AT3G54720, AT3G54900, AT3G56080, AT3G56160, AT3G56290, AT3G56300, AT3G56330, AT3G56570, AT3G57020, AT3G57040, AT3G57180, AT3G57190, AT3G57400, AT3G58840, AT3G58990, AT3G59220, AT3G59400, AT3G61220, AT3G61780, AT3G61880, AT3G63200, AT3G63530, AT4G00050, AT4G00165, AT4G00360, AT4G01037, AT4G01070, AT4G01080, AT4G01535, AT4G02630, AT4G02990, AT4G03600, AT4G04020, AT4G04610, AT4G05110, AT4G09350, AT4G09650, AT4G10120, AT4G10600, AT4G10620, AT4G11175, AT4G12390, AT4G12830, AT4G12880, AT4G12980, AT4G13800, AT4G14440, AT4G14690, AT4G15210, AT4G15248, AT4G15430, AT4G15480, AT4G15550, AT4G15810, AT4G16140, AT4G16400, AT4G16410, AT4G16690, AT4G16980, AT4G17180, AT4G17680, AT4G17880, AT4G17970, AT4G19170, AT4G20090, AT4G20360, AT4G21880, AT4G21990, AT4G23770, AT4G24540, AT4G24670, AT4G25290, AT4G25780, AT4G26600, AT4G26800, AT4G26850, AT4G27030, AT4G27700, AT4G28660, AT4G28700, AT4G28730, AT4G28740, AT4G28780, AT4G30470, AT4G30610, AT4G30960, AT4G31210, AT4G31390, AT4G31870, AT4G32770, AT4G33010, AT4G33560, AT4G34610, AT4G34630, AT4G35090, AT4G36580, AT4G36950, AT4G37650, AT4G37800, AT4G37925, AT4G38060, AT4G38680, AT4G38960, AT4G38970, AT4G39330, AT4G39470, AT4G39510, AT4G39800, AT5G01015, AT5G01075, AT5G01260, AT5G01410, AT5G01820, AT5G02050, AT5G02180, AT5G02230, AT5G02540, AT5G02830, AT5G02950, AT5G03555, AT5G03760, AT5G05270, AT5G05580, AT5G06550, AT5G06790, AT5G08610, AT5G08720, AT5G08760, AT5G09760, AT5G09840, AT5G10150, AT5G10470, AT5G12080, AT5G12110, AT5G13400, AT5G13730, AT5G13770, AT5G13920, AT5G14350, AT5G14580, AT5G14610, AT5G14740, AT5G15600, AT5G15845, AT5G15850, AT5G15948, AT5G15950, AT5G16340, AT5G16530, AT5G17050, AT5G17170, AT5G17300, AT5G18570, AT5G18670, AT5G18690, AT5G19300, AT5G19730, AT5G19850, AT5G19970, AT5G20070, AT5G20220, AT5G20225, AT5G20380, AT5G21100, AT5G22390, AT5G22640, AT5G23070, AT5G23730, AT5G23750, AT5G23760, AT5G24105, AT5G24120, AT5G24150, AT5G24165, AT5G24280, AT5G24380, AT5G24580, AT5G24660, AT5G24850, AT5G25120, AT5G25130, AT5G25140, AT5G25590, AT5G25630, AT5G28500, AT5G38420, AT5G38430, AT5G39710, AT5G43400, AT5G43630, AT5G43850, AT5G44190, AT5G44490, AT5G45800, AT5G46220, AT5G46580, AT5G47220, AT5G47360, AT5G47560, AT5G48030, AT5G48180, AT5G48850, AT5G48910, AT5G49100, AT5G49740, AT5G50100, AT5G51540, AT5G51720, AT5G52570, AT5G53170, AT5G53200, AT5G53970, AT5G54130, AT5G54470, AT5G54610, AT5G54630, AT5G55570, AT5G55730, AT5G55740, AT5G55790, AT5G56850, AT5G56860, AT5G57030, AT5G57180, AT5G57240, AT5G58770, AT5G58870, AT5G59780, AT5G61030, AT5G61130, AT5G61350, AT5G61670, AT5G62130, AT5G62140, AT5G62370, AT5G63530, AT5G63630, AT5G63700, AT5G64170, AT5G64710, AT5G64840, AT5G64940, AT5G65380, AT5G65820, AT5G66740, AT5G66960, AT5G67030, AT5G67370, AT5G67385, ATCG00330, ATCG00905, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01130, ATCG01170, ATCG01190, ATCG01300, ATCG01310, ATMG00030, ATMG00050, ATMG01130
## 100 NA
## [ reached getOption("max.print") -- omitted 143 rows ]library("biomaRt")
m <- useMart("plants_mart", dataset="athaliana_eg_gene", host="plants.ensembl.org")
# m <- useMart("ensembl", dataset="xmaculatus_gene_ensembl", host="ensembl.org")
goslimvec <- as.character(biomaRt::getBM(attributes=c("goslim_goa_accession"), mart=m)[,1])
goslimvec## [1] "GO:0003674" "GO:0003824" "GO:0005623" "GO:0005634" "GO:0005654" "GO:0005737" "GO:0005829"
## [8] "GO:0005575" "GO:0005622" "GO:0006950" "GO:0008150" "GO:0008152" "GO:0009987" "GO:0030154"
## [15] "GO:0016740" "GO:0030234" "GO:0009605" "GO:0009607" "GO:0005886" "GO:0016020" "GO:0019538"
## [22] "GO:0005488" "GO:0005515" "GO:0005102" "GO:0009719" "GO:0006464" "GO:0003676" "GO:0003723"
## [29] "GO:0006412" "GO:0009058" "GO:0009536" "GO:0003677" "GO:0016043" "GO:0006139" "GO:0005794"
## [36] "GO:0006810" "GO:0007154" "GO:0007165" "GO:0009056" "GO:0030312" "GO:0005576" "GO:0005618"
## [43] "GO:0005773" "GO:0005840" "GO:0005198" "GO:0000003" "GO:0007275" "GO:0009653" "GO:0009790"
## [50] "GO:0009791" "GO:0140110" "GO:0003700" "GO:0000166" "GO:0005739" "GO:0005215" "GO:0009579"
## [57] "GO:0016787" "GO:0019748" "GO:0009628" "GO:0038023" "GO:0016301" "GO:0005975" "GO:0030246"
## [64] "GO:0009856" "GO:0016049" "GO:0040007" "GO:0008289" "GO:0004518" "GO:0007049" "GO:0005856"
## [71] "GO:0003682" "GO:0008219" "GO:0006259" "GO:0009991" "GO:0005730" "GO:0006629" "GO:0005768"
## [78] "GO:0005783" "GO:0040029" "GO:0009875" "GO:0009908" "GO:0015979" "GO:0008135" "GO:0005615"
## [85] "GO:0019725" "GO:0005777" "GO:0003774" "GO:0045182" "GO:0006091" "GO:0009606" "GO:0031012"
## [92] "GO:0005764" "GO:0005635" "GO:0009838" "GO:0007267" "GO:0009835" "GO:0019825" "GO:0007610"BatchResultslim <- GOCluster_Report(catdb=catdb, setlist=DEGlist, method="slim", id_type="gene", myslimv=goslimvec, CLSZ=10, cutoff=0.01, gocats=c("MF", "BP", "CC"), recordSpecGO=NULL)## debugging in: GOCluster_Report(catdb = catdb, setlist = DEGlist, method = "slim",
## id_type = "gene", myslimv = goslimvec, CLSZ = 10, cutoff = 0.01,
## gocats = c("MF", "BP", "CC"), recordSpecGO = NULL)
## debug: {
## CL_DF <- data.frame(geneID = unlist(setlist), CLID = rep(names(setlist),
## sapply(setlist, length)), ClusterSize = rep(sapply(setlist,
## length), sapply(setlist, length)))
## cluster_loop <- unique(as.vector(CL_DF[CL_DF[, 3] >= CLSZ,
## 2]))
## if (all(gsub("(^CL).*", "\\1", cluster_loop) == "CL") & all(!is.na(suppressWarnings(as.numeric(gsub("^CL",
## "", cluster_loop)))))) {
## cluster_loop <- paste("CL", sort(as.numeric(gsub("CL",
## "", as.character(cluster_loop)))), sep = "")
## }
## if (method == "all") {
## containerDF <- data.frame(CLID = NULL, CLSZ = NULL, GOID = NULL,
## NodeSize = NULL, SampleMatch = NULL, Phyper = NULL,
## Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## for (i in cluster_loop) {
## cat("\n", "Processing cluster no", i, "with method: \"all\" (GOHyperGAll) \n")
## if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb,
## affyIDs = affy_sample, probe2gene = 1)
## }
## if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] ==
## i, 1])
## }
## containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL,
## SampleMatch = NULL, Phyper = NULL, Padj = NULL,
## Term = NULL, Ont = NULL, SampleKeys = NULL)
## count <- 0
## for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb = catdb,
## gocat = j, sample = test_sample, ...)
## tempDF <- GOHyperGAll_result[GOHyperGAll_result$Padj <=
## cutoff, ]
## if (length(tempDF[, 1]) == 0) {
## tempDF <- GOHyperGAll_result[1:2, ]
## }
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j,
## SampleKeys = paste(no_annot, collapse = ", ")))
## }
## tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[,
## 2] == i, 3])), times = length(containerDF2[,
## 1])), containerDF2)
## containerDF <- rbind(containerDF, tempDF2)
## }
## return(containerDF)
## }
## if (method == "slim") {
## containerDF <- data.frame(CLID = NULL, CLSZ = NULL, GOID = NULL,
## NodeSize = NULL, SampleMatch = NULL, Phyper = NULL,
## Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## for (i in cluster_loop) {
## cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
## if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb,
## affyIDs = affy_sample, probe2gene = 1)
## }
## if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] ==
## i, 1])
## }
## containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL,
## SampleMatch = NULL, Phyper = NULL, Padj = NULL,
## Term = NULL, Ont = NULL, SampleKeys = NULL)
## count <- 0
## for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j,
## sample = test_sample, ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676",
## "GO:0000166", "GO:0019825", "GO:0005515",
## "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519",
## "GO:0007154", "GO:0016043", "GO:0006412",
## "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979",
## "GO:0005618", "GO:0005829", "GO:0005783",
## "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856",
## "GO:0005634", "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result,
## sample = test_sample, type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j,
## SampleKeys = paste(no_annot, collapse = ", ")))
## }
## tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[,
## 2] == i, 3])), times = length(containerDF2[,
## 1])), containerDF2)
## containerDF <- rbind(containerDF, tempDF2)
## }
## return(containerDF)
## }
## if (method == "simplify") {
## containerDF <- data.frame(CLID = NULL, CLSZ = NULL, GOID = NULL,
## NodeSize = NULL, SampleMatch = NULL, Phyper = NULL,
## Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL,
## GO_OL_Match = NULL)
## for (i in cluster_loop) {
## cat("\n", "Processing cluster no", i, "with method: \"simplify\" (GOHyperGAll_Simplify) \n")
## if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb,
## affyIDs = affy_sample, probe2gene = 1)
## }
## if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] ==
## i, 1])
## }
## containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL,
## SampleMatch = NULL, Phyper = NULL, Padj = NULL,
## Term = NULL, Ont = NULL, SampleKeys = NULL, GO_OL_Match = NULL)
## count <- 0
## for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j,
## sample = test_sample, ...)
## simplifyDF <- GOHyperGAll_Simplify(GOHyperGAll_result,
## gocat = j, cutoff = cutoff, correct = correct)
## if (length(simplifyDF) == 0) {
## simplifyDF <- GOHyperGAll_Simplify(GOHyperGAll_result[1:2,
## ], gocat = j, cutoff = 1, correct = TRUE)
## }
## tempDF <- data.frame(GOHyperGAll_result[GOHyperGAll_result[,
## 1] %in% simplifyDF[, 1], ], GO_OL_Match = simplifyDF[,
## 2])
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, data.frame(GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ], GO_OL_Match = GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], 3]))
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j,
## SampleKeys = paste(no_annot, collapse = ", "),
## GO_OL_Match = length(no_annot)))
## }
## tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[,
## 2] == i, 3])), times = length(containerDF2[,
## 1])), containerDF2)
## containerDF <- rbind(containerDF, tempDF2)
## }
## containerDF <- containerDF[, c(1:9, 11, 10)]
## return(containerDF)
## }
## }
## debug: CL_DF <- data.frame(geneID = unlist(setlist), CLID = rep(names(setlist),
## sapply(setlist, length)), ClusterSize = rep(sapply(setlist,
## length), sapply(setlist, length)))
## debug: cluster_loop <- unique(as.vector(CL_DF[CL_DF[, 3] >= CLSZ, 2]))
## debug: if (all(gsub("(^CL).*", "\\1", cluster_loop) == "CL") & all(!is.na(suppressWarnings(as.numeric(gsub("^CL",
## "", cluster_loop)))))) {
## cluster_loop <- paste("CL", sort(as.numeric(gsub("CL", "",
## as.character(cluster_loop)))), sep = "")
## }
## debug: if (method == "all") {
## containerDF <- data.frame(CLID = NULL, CLSZ = NULL, GOID = NULL,
## NodeSize = NULL, SampleMatch = NULL, Phyper = NULL, Padj = NULL,
## Term = NULL, Ont = NULL, SampleKeys = NULL)
## for (i in cluster_loop) {
## cat("\n", "Processing cluster no", i, "with method: \"all\" (GOHyperGAll) \n")
## if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL,
## SampleMatch = NULL, Phyper = NULL, Padj = NULL, Term = NULL,
## Ont = NULL, SampleKeys = NULL)
## count <- 0
## for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb = catdb,
## gocat = j, sample = test_sample, ...)
## tempDF <- GOHyperGAll_result[GOHyperGAll_result$Padj <=
## cutoff, ]
## if (length(tempDF[, 1]) == 0) {
## tempDF <- GOHyperGAll_result[1:2, ]
## }
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] ==
## i, 3])), times = length(containerDF2[, 1])), containerDF2)
## containerDF <- rbind(containerDF, tempDF2)
## }
## return(containerDF)
## }
## debug: if (method == "slim") {
## containerDF <- data.frame(CLID = NULL, CLSZ = NULL, GOID = NULL,
## NodeSize = NULL, SampleMatch = NULL, Phyper = NULL, Padj = NULL,
## Term = NULL, Ont = NULL, SampleKeys = NULL)
## for (i in cluster_loop) {
## cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
## if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL,
## SampleMatch = NULL, Phyper = NULL, Padj = NULL, Term = NULL,
## Ont = NULL, SampleKeys = NULL)
## count <- 0
## for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j,
## sample = test_sample, ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result,
## sample = test_sample, type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] ==
## i, 3])), times = length(containerDF2[, 1])), containerDF2)
## containerDF <- rbind(containerDF, tempDF2)
## }
## return(containerDF)
## }
## debug: containerDF <- data.frame(CLID = NULL, CLSZ = NULL, GOID = NULL,
## NodeSize = NULL, SampleMatch = NULL, Phyper = NULL, Padj = NULL,
## Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: for (i in cluster_loop) {
## cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
## if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL,
## SampleMatch = NULL, Phyper = NULL, Padj = NULL, Term = NULL,
## Ont = NULL, SampleKeys = NULL)
## count <- 0
## for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result,
## sample = test_sample, type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] ==
## i, 3])), times = length(containerDF2[, 1])), containerDF2)
## containerDF <- rbind(containerDF, tempDF2)
## }
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M1-A1_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M1-V1_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A1-V1_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M6-A6_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M6-V6_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A6-V6_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M12-A12_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M12-V12_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A12-V12_up_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M1-V1_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A1-V1_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M6-A6_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M6-V6_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A6-V6_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M12-A12_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M12-V12_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A12-V12_up with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M1-A1_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M1-V1_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A1-V1_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M6-A6_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M6-V6_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A6-V6_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M12-A12_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no M12-V12_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: cat("\n", "Processing cluster no", i, "with method: \"slim\" (GOHyperGAll_Subset) \n")
##
## Processing cluster no A12-V12_down with method: "slim" (GOHyperGAll_Subset)
## debug: if (id_type == "affy") {
## affy_sample <- CL_DF[CL_DF[, 2] == i, 1]
## test_sample <- .AffyID2GeneID(catdb = catdb, affyIDs = affy_sample,
## probe2gene = 1)
## }
## debug: if (id_type == "gene") {
## test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## }
## debug: test_sample <- as.vector(CL_DF[CL_DF[, 2] == i, 1])
## debug: containerDF2 <- data.frame(GOID = NULL, NodeSize = NULL, SampleMatch = NULL,
## Phyper = NULL, Padj = NULL, Term = NULL, Ont = NULL, SampleKeys = NULL)
## debug: count <- 0
## debug: for (j in gocats) {
## count <- count + 1
## GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575",
## "GO:0030246", "GO:0008289", "GO:0003676", "GO:0000166",
## "GO:0019825", "GO:0005515", "GO:0003824", "GO:0030234",
## "GO:0003774", "GO:0004871", "GO:0005198", "GO:0030528",
## "GO:0045182", "GO:0005215", "GO:0006519", "GO:0007154",
## "GO:0016043", "GO:0006412", "GO:0006464", "GO:0006810",
## "GO:0007275", "GO:0007049", "GO:0005975", "GO:0006629",
## "GO:0006139", "GO:0019748", "GO:0015979", "GO:0005618",
## "GO:0005829", "GO:0005783", "GO:0005768", "GO:0005794",
## "GO:0005739", "GO:0005777", "GO:0009536", "GO:0005840",
## "GO:0005773", "GO:0005764", "GO:0005856", "GO:0005634",
## "GO:0005886", "GO:0005576")
## }
## else {
## slimv <- myslimv
## }
## tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## containerDF2 <- rbind(containerDF2, tempDF)
## if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## no_annot <- no_annot[no_annot != "no_match"]
## containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## }
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: count <- count + 1
## debug: GOHyperGAll_result <- GOHyperGAll(catdb, gocat = j, sample = test_sample,
## ...)
## debug: if (any(myslimv == "default")) {
## slimv <- c("GO:0003674", "GO:0008150", "GO:0005575", "GO:0030246",
## "GO:0008289", "GO:0003676", "GO:0000166", "GO:0019825",
## "GO:0005515", "GO:0003824", "GO:0030234", "GO:0003774",
## "GO:0004871", "GO:0005198", "GO:0030528", "GO:0045182",
## "GO:0005215", "GO:0006519", "GO:0007154", "GO:0016043",
## "GO:0006412", "GO:0006464", "GO:0006810", "GO:0007275",
## "GO:0007049", "GO:0005975", "GO:0006629", "GO:0006139",
## "GO:0019748", "GO:0015979", "GO:0005618", "GO:0005829",
## "GO:0005783", "GO:0005768", "GO:0005794", "GO:0005739",
## "GO:0005777", "GO:0009536", "GO:0005840", "GO:0005773",
## "GO:0005764", "GO:0005856", "GO:0005634", "GO:0005886",
## "GO:0005576")
## } else {
## slimv <- myslimv
## }
## debug: slimv <- myslimv
## debug: tempDF <- GOHyperGAll_Subset(catdb, GOHyperGAll_result, sample = test_sample,
## type = "goSlim", myslimv = slimv)
## debug: containerDF2 <- rbind(containerDF2, tempDF)
## debug: if (length(recordSpecGO) > 0) {
## containerDF2 <- rbind(containerDF2, GOHyperGAll_result[GOHyperGAll_result[,
## 1] == recordSpecGO[count], ])
## }
## debug: no_annot <- test_sample[!test_sample %in% eval(parse(text = paste("catmap(catdb)$D_",
## j, sep = "")))[, 2]]
## debug: no_annot <- no_annot[no_annot != "no_match"]
## debug: containerDF2 <- rbind(containerDF2, data.frame(GOID = paste("no_annot_",
## j, sep = ""), NodeSize = NA, SampleMatch = length(no_annot),
## Phyper = NA, Padj = NA, Term = NA, Ont = j, SampleKeys = paste(no_annot,
## collapse = ", ")))
## debug: tempDF2 <- data.frame(CLID = rep(i, times = length(containerDF2[,
## 1])), CLSZ = rep(unique(as.vector(CL_DF[CL_DF[, 2] == i,
## 3])), times = length(containerDF2[, 1])), containerDF2)
## debug: containerDF <- rbind(containerDF, tempDF2)
## debug: return(containerDF)
## exiting from: GOCluster_Report(catdb = catdb, setlist = DEGlist, method = "slim",
## id_type = "gene", myslimv = goslimvec, CLSZ = 10, cutoff = 0.01,
## gocats = c("MF", "BP", "CC"), recordSpecGO = NULL)str(BatchResultslim)## 'data.frame': 2626 obs. of 10 variables:
## $ CLID : Factor w/ 26 levels "M1-A1_up_down",..: 1 1 1 1 1 1 1 1 1 1 ...
## $ CLSZ : int 24 24 24 24 24 24 24 24 24 24 ...
## $ GOID : Factor w/ 44919 levels "GO:0000006","GO:0000007",..: 31 422 423 424 428 439 448 461 469 965 ...
## $ NodeSize : int 0 1851 0 0 0 0 0 0 0 0 ...
## $ SampleMatch: int 0 0 0 0 0 0 0 0 0 0 ...
## $ Phyper : num 1 1 1 1 1 1 1 1 1 1 ...
## $ Padj : num 1 1 1 1 1 1 1 1 1 1 ...
## $ Term : Factor w/ 44917 levels "'de novo' actin filament nucleation",..: 26007 20704 25895 10137 7484 10138 39465 20851 5722 25890 ...
## $ Ont : Factor w/ 4 levels "BP","CC","MF",..: 3 3 3 3 3 3 3 3 3 3 ...
## $ SampleKeys : Factor w/ 145 levels "NA","AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, A"| __truncated__,..: 1 1 1 1 1 1 1 1 1 1 ...BatchResultslim## CLID CLSZ GOID NodeSize SampleMatch Phyper Padj
## 31 M1-A1_up_down 24 GO:0000166 0 0 1 1
## 422 M1-A1_up_down 24 GO:0003674 1851 0 1 1
## 423 M1-A1_up_down 24 GO:0003676 0 0 1 1
## 424 M1-A1_up_down 24 GO:0003677 0 0 1 1
## 428 M1-A1_up_down 24 GO:0003682 0 0 1 1
## 439 M1-A1_up_down 24 GO:0003700 0 0 1 1
## 448 M1-A1_up_down 24 GO:0003723 0 0 1 1
## 461 M1-A1_up_down 24 GO:0003774 0 0 1 1
## 469 M1-A1_up_down 24 GO:0003824 0 0 1 1
## 965 M1-A1_up_down 24 GO:0004518 0 0 1 1
## 1416 M1-A1_up_down 24 GO:0005102 0 0 1 1
## 1487 M1-A1_up_down 24 GO:0005198 0 0 1 1
## 1494 M1-A1_up_down 24 GO:0005215 0 0 1 1
## 1624 M1-A1_up_down 24 GO:0005488 0 0 1 1
## 1636 M1-A1_up_down 24 GO:0005515 0 0 1 1
## 1718 M1-A1_up_down 24 GO:0008135 0 0 1 1
## 1790 M1-A1_up_down 24 GO:0008289 0 0 1 1
## 2974 M1-A1_up_down 24 GO:0016301 0 0 1 1
## 3159 M1-A1_up_down 24 GO:0016740 0 0 1 1
## 3200 M1-A1_up_down 24 GO:0016787 0 0 1 1
## 3956 M1-A1_up_down 24 GO:0019825 0 0 1 1
## 4113 M1-A1_up_down 24 GO:0030234 0 0 1 1
## 4115 M1-A1_up_down 24 GO:0030246 0 0 1 1
## 5835 M1-A1_up_down 24 GO:0038023 0 0 1 1
## 6464 M1-A1_up_down 24 GO:0045182 0 0 1 1
## 10823 M1-A1_up_down 24 GO:0140110 0 0 1 1
## 1 M1-A1_up_down 24 no_annot_MF NA 24 NA NA
## 3 M1-A1_up_down 24 GO:0000003 0 0 1 1
## 1994 M1-A1_up_down 24 GO:0005975 0 0 1 1
## 2106 M1-A1_up_down 24 GO:0006091 0 0 1 1
## 2136 M1-A1_up_down 24 GO:0006139 0 0 1 1
## 2236 M1-A1_up_down 24 GO:0006259 0 0 1 1
## 2346 M1-A1_up_down 24 GO:0006412 0 0 1 1
## 2382 M1-A1_up_down 24 GO:0006464 0 0 1 1
## 2525 M1-A1_up_down 24 GO:0006629 0 0 1 1
## 2678 M1-A1_up_down 24 GO:0006810 0 0 1 1
## 2776 M1-A1_up_down 24 GO:0006950 0 0 1 1
## 2849 M1-A1_up_down 24 GO:0007049 0 0 1 1
## 2924 M1-A1_up_down 24 GO:0007154 0 0 1 1
## 2935 M1-A1_up_down 24 GO:0007165 0 0 1 1
## 3009 M1-A1_up_down 24 GO:0007267 0 0 1 1
## 3016 M1-A1_up_down 24 GO:0007275 0 0 1 1
## 3296 M1-A1_up_down 24 GO:0007610 0 0 1 1
## 3354 M1-A1_up_down 24 GO:0008150 5533 2 1 1
## 3355 M1-A1_up_down 24 GO:0008152 0 0 1 1
## 3376 M1-A1_up_down 24 GO:0008219 0 0 1 1
## 3466 M1-A1_up_down 24 GO:0009056 0 0 1 1
## 3468 M1-A1_up_down 24 GO:0009058 0 0 1 1
## 3774 M1-A1_up_down 24 GO:0009605 0 0 1 1
## 3775 M1-A1_up_down 24 GO:0009606 0 0 1 1
## 3776 M1-A1_up_down 24 GO:0009607 0 0 1 1
## 3791 M1-A1_up_down 24 GO:0009628 0 0 1 1
## 3813 M1-A1_up_down 24 GO:0009653 0 0 1 1
## 3859 M1-A1_up_down 24 GO:0009719 0 0 1 1
## 3923 M1-A1_up_down 24 GO:0009790 0 0 1 1
## 3924 M1-A1_up_down 24 GO:0009791 0 0 1 1
## 3963 M1-A1_up_down 24 GO:0009835 0 0 1 1
## 3966 M1-A1_up_down 24 GO:0009838 0 0 1 1
## 3978 M1-A1_up_down 24 GO:0009856 0 0 1 1
## 3992 M1-A1_up_down 24 GO:0009875 0 0 1 1
## 4016 M1-A1_up_down 24 GO:0009908 0 0 1 1
## 4063 M1-A1_up_down 24 GO:0009987 0 0 1 1
## 4067 M1-A1_up_down 24 GO:0009991 0 0 1 1
## 5406 M1-A1_up_down 24 GO:0015979 0 0 1 1
## 5426 M1-A1_up_down 24 GO:0016043 0 0 1 1
## 5431 M1-A1_up_down 24 GO:0016049 0 0 1 1
## 6516 M1-A1_up_down 24 GO:0019538 0 0 1 1
## 6680 M1-A1_up_down 24 GO:0019725 0 0 1 1
## 6695 M1-A1_up_down 24 GO:0019748 0 0 1 1
## 7413 M1-A1_up_down 24 GO:0030154 0 0 1 1
## 11084 M1-A1_up_down 24 GO:0040007 0 0 1 1
## 11105 M1-A1_up_down 24 GO:0040029 0 0 1 1
## 11 M1-A1_up_down 24 no_annot_BP NA 22 NA NA
## 217 M1-A1_up_down 24 GO:0005575 803 0 1 1
## 218 M1-A1_up_down 24 GO:0005576 0 0 1 1
## 254 M1-A1_up_down 24 GO:0005615 0 0 1 1
## 256 M1-A1_up_down 24 GO:0005618 0 0 1 1
## 259 M1-A1_up_down 24 GO:0005622 0 0 1 1
## 260 M1-A1_up_down 24 GO:0005623 0 0 1 1
## 266 M1-A1_up_down 24 GO:0005634 0 0 1 1
## 267 M1-A1_up_down 24 GO:0005635 0 0 1 1
## 276 M1-A1_up_down 24 GO:0005654 0 0 1 1
## 333 M1-A1_up_down 24 GO:0005730 0 0 1 1
## 337 M1-A1_up_down 24 GO:0005737 0 0 1 1
## 338 M1-A1_up_down 24 GO:0005739 0 0 1 1
## 360 M1-A1_up_down 24 GO:0005764 0 0 1 1
## 364 M1-A1_up_down 24 GO:0005768 0 0 1 1
## 368 M1-A1_up_down 24 GO:0005773 0 0 1 1
## 372 M1-A1_up_down 24 GO:0005777 0 0 1 1
## 377 M1-A1_up_down 24 GO:0005783 0 0 1 1
## 387 M1-A1_up_down 24 GO:0005794 0 0 1 1
## 409 M1-A1_up_down 24 GO:0005829 0 0 1 1
## 418 M1-A1_up_down 24 GO:0005840 0 0 1 1
## 430 M1-A1_up_down 24 GO:0005856 0 0 1 1
## 453 M1-A1_up_down 24 GO:0005886 0 0 1 1
## 661 M1-A1_up_down 24 GO:0009536 0 0 1 1
## 686 M1-A1_up_down 24 GO:0009579 0 0 1 1
## 765 M1-A1_up_down 24 GO:0016020 0 0 1 1
## 993 M1-A1_up_down 24 GO:0030312 0 0 1 1
## 1095 M1-A1_up_down 24 GO:0031012 0 0 1 1
## Term Ont
## 31 nucleotide binding MF
## 422 molecular_function MF
## 423 nucleic acid binding MF
## 424 DNA binding MF
## 428 chromatin binding MF
## 439 DNA binding transcription factor activity MF
## 448 RNA binding MF
## 461 motor activity MF
## 469 catalytic activity MF
## 965 nuclease activity MF
## 1416 signaling receptor binding MF
## 1487 structural molecule activity MF
## 1494 transporter activity MF
## 1624 binding MF
## 1636 protein binding MF
## 1718 translation factor activity, RNA binding MF
## 1790 lipid binding MF
## 2974 kinase activity MF
## 3159 transferase activity MF
## 3200 hydrolase activity MF
## 3956 oxygen binding MF
## 4113 enzyme regulator activity MF
## 4115 carbohydrate binding MF
## 5835 signaling receptor activity MF
## 6464 translation regulator activity MF
## 10823 transcription regulator activity MF
## 1 <NA> MF
## 3 reproduction BP
## 1994 carbohydrate metabolic process BP
## 2106 generation of precursor metabolites and energy BP
## 2136 nucleobase-containing compound metabolic process BP
## 2236 DNA metabolic process BP
## 2346 translation BP
## 2382 cellular protein modification process BP
## 2525 lipid metabolic process BP
## 2678 transport BP
## 2776 response to stress BP
## 2849 cell cycle BP
## 2924 cell communication BP
## 2935 signal transduction BP
## 3009 cell-cell signaling BP
## 3016 multicellular organism development BP
## 3296 behavior BP
## 3354 biological_process BP
## 3355 metabolic process BP
## 3376 cell death BP
## 3466 catabolic process BP
## 3468 biosynthetic process BP
## 3774 response to external stimulus BP
## 3775 tropism BP
## 3776 response to biotic stimulus BP
## 3791 response to abiotic stimulus BP
## 3813 anatomical structure morphogenesis BP
## 3859 response to endogenous stimulus BP
## 3923 embryo development BP
## 3924 post-embryonic development BP
## 3963 fruit ripening BP
## 3966 abscission BP
## 3978 pollination BP
## 3992 pollen-pistil interaction BP
## 4016 flower development BP
## 4063 cellular process BP
## 4067 response to extracellular stimulus BP
## 5406 photosynthesis BP
## 5426 cellular component organization BP
## 5431 cell growth BP
## 6516 protein metabolic process BP
## 6680 cellular homeostasis BP
## 6695 secondary metabolic process BP
## 7413 cell differentiation BP
## 11084 growth BP
## 11105 regulation of gene expression, epigenetic BP
## 11 <NA> BP
## 217 cellular_component CC
## 218 extracellular region CC
## 254 extracellular space CC
## 256 cell wall CC
## 259 intracellular CC
## 260 cell CC
## 266 nucleus CC
## 267 nuclear envelope CC
## 276 nucleoplasm CC
## 333 nucleolus CC
## 337 cytoplasm CC
## 338 mitochondrion CC
## 360 lysosome CC
## 364 endosome CC
## 368 vacuole CC
## 372 peroxisome CC
## 377 endoplasmic reticulum CC
## 387 Golgi apparatus CC
## 409 cytosol CC
## 418 ribosome CC
## 430 cytoskeleton CC
## 453 plasma membrane CC
## 661 plastid CC
## 686 thylakoid CC
## 765 membrane CC
## 993 external encapsulating structure CC
## 1095 extracellular matrix CC
## SampleKeys
## 31 NA
## 422 NA
## 423 NA
## 424 NA
## 428 NA
## 439 NA
## 448 NA
## 461 NA
## 469 NA
## 965 NA
## 1416 NA
## 1487 NA
## 1494 NA
## 1624 NA
## 1636 NA
## 1718 NA
## 1790 NA
## 2974 NA
## 3159 NA
## 3200 NA
## 3956 NA
## 4113 NA
## 4115 NA
## 5835 NA
## 6464 NA
## 10823 NA
## 1 AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G18540, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 3 NA
## 1994 NA
## 2106 NA
## 2136 NA
## 2236 NA
## 2346 NA
## 2382 NA
## 2525 NA
## 2678 NA
## 2776 NA
## 2849 NA
## 2924 NA
## 2935 NA
## 3009 NA
## 3016 NA
## 3296 NA
## 3354 AT4G18540 AT1G07050
## 3355 NA
## 3376 NA
## 3466 NA
## 3468 NA
## 3774 NA
## 3775 NA
## 3776 NA
## 3791 NA
## 3813 NA
## 3859 NA
## 3923 NA
## 3924 NA
## 3963 NA
## 3966 NA
## 3978 NA
## 3992 NA
## 4016 NA
## 4063 NA
## 4067 NA
## 5406 NA
## 5426 NA
## 5431 NA
## 6516 NA
## 6680 NA
## 6695 NA
## 7413 NA
## 11084 NA
## 11105 NA
## 11 AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 217 NA
## 218 NA
## 254 NA
## 256 NA
## 259 NA
## 260 NA
## 266 NA
## 267 NA
## 276 NA
## 333 NA
## 337 NA
## 338 NA
## 360 NA
## 364 NA
## 368 NA
## 372 NA
## 377 NA
## 387 NA
## 409 NA
## 418 NA
## 430 NA
## 453 NA
## 661 NA
## 686 NA
## 765 NA
## 993 NA
## 1095 NA
## [ reached getOption("max.print") -- omitted 2526 rows ]save(BatchResultslim, file="data/GO/BatchResultslim.RData")7.3 Plot batch GO term results
The data.frame generated by GOCluster can be plotted with the goBarplot function. Because of the variable size of the sample sets, it may not always be desirable to show the results from different DEG sets in the same bar plot. Plotting single sample sets is achieved by subsetting the input data frame as shown in the first line of the following example.
displayKnitStatus()
load("data/GO/BatchResultslim.RData")
gos <- BatchResultslim[grep("M6-V6_up_down", BatchResultslim$CLID), ]
str(gos)## 'data.frame': 101 obs. of 10 variables:
## $ CLID : Factor w/ 26 levels "M1-A1_up_down",..: 5 5 5 5 5 5 5 5 5 5 ...
## $ CLSZ : int 1311 1311 1311 1311 1311 1311 1311 1311 1311 1311 ...
## $ GOID : Factor w/ 44919 levels "GO:0000006","GO:0000007",..: 31 422 423 424 428 439 448 461 469 965 ...
## $ NodeSize : int 0 1851 0 0 0 0 0 0 0 0 ...
## $ SampleMatch: int 0 55 0 0 0 0 0 0 0 0 ...
## $ Phyper : num 1 1 1 1 1 1 1 1 1 1 ...
## $ Padj : num 1 1 1 1 1 1 1 1 1 1 ...
## $ Term : Factor w/ 44917 levels "'de novo' actin filament nucleation",..: 26007 20704 25895 10137 7484 10138 39465 20851 5722 25890 ...
## $ Ont : Factor w/ 4 levels "BP","CC","MF",..: 3 3 3 3 3 3 3 3 3 3 ...
## $ SampleKeys : Factor w/ 145 levels "NA","AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, A"| __truncated__,..: 1 23 1 1 1 1 1 1 1 1 ...gos## CLID CLSZ GOID NodeSize SampleMatch Phyper Padj
## 314 M6-V6_up_down 1311 GO:0000166 0 0 1 1
## 4224 M6-V6_up_down 1311 GO:0003674 1851 55 1 1
## 4234 M6-V6_up_down 1311 GO:0003676 0 0 1 1
## 4244 M6-V6_up_down 1311 GO:0003677 0 0 1 1
## 4284 M6-V6_up_down 1311 GO:0003682 0 0 1 1
## 4394 M6-V6_up_down 1311 GO:0003700 0 0 1 1
## 4484 M6-V6_up_down 1311 GO:0003723 0 0 1 1
## 4614 M6-V6_up_down 1311 GO:0003774 0 0 1 1
## 4694 M6-V6_up_down 1311 GO:0003824 0 0 1 1
## 9654 M6-V6_up_down 1311 GO:0004518 0 0 1 1
## 14164 M6-V6_up_down 1311 GO:0005102 0 0 1 1
## 14874 M6-V6_up_down 1311 GO:0005198 0 0 1 1
## 14944 M6-V6_up_down 1311 GO:0005215 0 0 1 1
## 16244 M6-V6_up_down 1311 GO:0005488 0 0 1 1
## 16364 M6-V6_up_down 1311 GO:0005515 0 0 1 1
## 17184 M6-V6_up_down 1311 GO:0008135 0 0 1 1
## 17904 M6-V6_up_down 1311 GO:0008289 0 0 1 1
## 29744 M6-V6_up_down 1311 GO:0016301 0 0 1 1
## 31594 M6-V6_up_down 1311 GO:0016740 0 0 1 1
## 32004 M6-V6_up_down 1311 GO:0016787 0 0 1 1
## 39564 M6-V6_up_down 1311 GO:0019825 0 0 1 1
## 41134 M6-V6_up_down 1311 GO:0030234 0 0 1 1
## 41154 M6-V6_up_down 1311 GO:0030246 0 0 1 1
## 58354 M6-V6_up_down 1311 GO:0038023 0 0 1 1
## 64644 M6-V6_up_down 1311 GO:0045182 0 0 1 1
## 108234 M6-V6_up_down 1311 GO:0140110 0 0 1 1
## 16 M6-V6_up_down 1311 no_annot_MF NA 1256 NA NA
## 35 M6-V6_up_down 1311 GO:0000003 0 0 1 1
## 19944 M6-V6_up_down 1311 GO:0005975 0 0 1 1
## 21064 M6-V6_up_down 1311 GO:0006091 0 0 1 1
## 21364 M6-V6_up_down 1311 GO:0006139 0 0 1 1
## 22364 M6-V6_up_down 1311 GO:0006259 0 0 1 1
## 23464 M6-V6_up_down 1311 GO:0006412 0 0 1 1
## 23824 M6-V6_up_down 1311 GO:0006464 0 0 1 1
## 25254 M6-V6_up_down 1311 GO:0006629 0 0 1 1
## 26784 M6-V6_up_down 1311 GO:0006810 0 0 1 1
## 27764 M6-V6_up_down 1311 GO:0006950 0 0 1 1
## 28494 M6-V6_up_down 1311 GO:0007049 0 0 1 1
## 29244 M6-V6_up_down 1311 GO:0007154 0 0 1 1
## 29354 M6-V6_up_down 1311 GO:0007165 0 0 1 1
## 30094 M6-V6_up_down 1311 GO:0007267 0 0 1 1
## 30164 M6-V6_up_down 1311 GO:0007275 0 0 1 1
## 32964 M6-V6_up_down 1311 GO:0007610 0 0 1 1
## 33544 M6-V6_up_down 1311 GO:0008150 5533 217 1 1
## 33554 M6-V6_up_down 1311 GO:0008152 0 0 1 1
## 33764 M6-V6_up_down 1311 GO:0008219 0 0 1 1
## 34664 M6-V6_up_down 1311 GO:0009056 0 0 1 1
## 34684 M6-V6_up_down 1311 GO:0009058 0 0 1 1
## 37744 M6-V6_up_down 1311 GO:0009605 0 0 1 1
## 37754 M6-V6_up_down 1311 GO:0009606 0 0 1 1
## 37764 M6-V6_up_down 1311 GO:0009607 0 0 1 1
## 37914 M6-V6_up_down 1311 GO:0009628 0 0 1 1
## 38134 M6-V6_up_down 1311 GO:0009653 0 0 1 1
## 38594 M6-V6_up_down 1311 GO:0009719 0 0 1 1
## 39234 M6-V6_up_down 1311 GO:0009790 0 0 1 1
## 39244 M6-V6_up_down 1311 GO:0009791 0 0 1 1
## 39634 M6-V6_up_down 1311 GO:0009835 0 0 1 1
## 39664 M6-V6_up_down 1311 GO:0009838 0 0 1 1
## 39784 M6-V6_up_down 1311 GO:0009856 0 0 1 1
## 39924 M6-V6_up_down 1311 GO:0009875 0 0 1 1
## 40164 M6-V6_up_down 1311 GO:0009908 0 0 1 1
## 40634 M6-V6_up_down 1311 GO:0009987 0 0 1 1
## 40674 M6-V6_up_down 1311 GO:0009991 0 0 1 1
## 54064 M6-V6_up_down 1311 GO:0015979 0 0 1 1
## 54264 M6-V6_up_down 1311 GO:0016043 0 0 1 1
## 54314 M6-V6_up_down 1311 GO:0016049 0 0 1 1
## 65164 M6-V6_up_down 1311 GO:0019538 0 0 1 1
## 66804 M6-V6_up_down 1311 GO:0019725 0 0 1 1
## 66954 M6-V6_up_down 1311 GO:0019748 0 0 1 1
## 74134 M6-V6_up_down 1311 GO:0030154 0 0 1 1
## 110844 M6-V6_up_down 1311 GO:0040007 0 0 1 1
## 111054 M6-V6_up_down 1311 GO:0040029 0 0 1 1
## 114 M6-V6_up_down 1311 no_annot_BP NA 1094 NA NA
## 2174 M6-V6_up_down 1311 GO:0005575 803 36 1 1
## 2184 M6-V6_up_down 1311 GO:0005576 0 0 1 1
## 2544 M6-V6_up_down 1311 GO:0005615 0 0 1 1
## 2564 M6-V6_up_down 1311 GO:0005618 0 0 1 1
## 2594 M6-V6_up_down 1311 GO:0005622 0 0 1 1
## 2604 M6-V6_up_down 1311 GO:0005623 0 0 1 1
## 2664 M6-V6_up_down 1311 GO:0005634 0 0 1 1
## 2674 M6-V6_up_down 1311 GO:0005635 0 0 1 1
## 2764 M6-V6_up_down 1311 GO:0005654 0 0 1 1
## 3334 M6-V6_up_down 1311 GO:0005730 0 0 1 1
## 3374 M6-V6_up_down 1311 GO:0005737 0 0 1 1
## 3384 M6-V6_up_down 1311 GO:0005739 0 0 1 1
## 3604 M6-V6_up_down 1311 GO:0005764 0 0 1 1
## 3644 M6-V6_up_down 1311 GO:0005768 0 0 1 1
## 3684 M6-V6_up_down 1311 GO:0005773 0 0 1 1
## 3724 M6-V6_up_down 1311 GO:0005777 0 0 1 1
## 3777 M6-V6_up_down 1311 GO:0005783 0 0 1 1
## 3874 M6-V6_up_down 1311 GO:0005794 0 0 1 1
## 4094 M6-V6_up_down 1311 GO:0005829 0 0 1 1
## 4184 M6-V6_up_down 1311 GO:0005840 0 0 1 1
## 4304 M6-V6_up_down 1311 GO:0005856 0 0 1 1
## 4534 M6-V6_up_down 1311 GO:0005886 0 0 1 1
## 6614 M6-V6_up_down 1311 GO:0009536 0 0 1 1
## 6864 M6-V6_up_down 1311 GO:0009579 0 0 1 1
## 7654 M6-V6_up_down 1311 GO:0016020 0 0 1 1
## 9934 M6-V6_up_down 1311 GO:0030312 0 0 1 1
## 10954 M6-V6_up_down 1311 GO:0031012 0 0 1 1
## Term Ont
## 314 nucleotide binding MF
## 4224 molecular_function MF
## 4234 nucleic acid binding MF
## 4244 DNA binding MF
## 4284 chromatin binding MF
## 4394 DNA binding transcription factor activity MF
## 4484 RNA binding MF
## 4614 motor activity MF
## 4694 catalytic activity MF
## 9654 nuclease activity MF
## 14164 signaling receptor binding MF
## 14874 structural molecule activity MF
## 14944 transporter activity MF
## 16244 binding MF
## 16364 protein binding MF
## 17184 translation factor activity, RNA binding MF
## 17904 lipid binding MF
## 29744 kinase activity MF
## 31594 transferase activity MF
## 32004 hydrolase activity MF
## 39564 oxygen binding MF
## 41134 enzyme regulator activity MF
## 41154 carbohydrate binding MF
## 58354 signaling receptor activity MF
## 64644 translation regulator activity MF
## 108234 transcription regulator activity MF
## 16 <NA> MF
## 35 reproduction BP
## 19944 carbohydrate metabolic process BP
## 21064 generation of precursor metabolites and energy BP
## 21364 nucleobase-containing compound metabolic process BP
## 22364 DNA metabolic process BP
## 23464 translation BP
## 23824 cellular protein modification process BP
## 25254 lipid metabolic process BP
## 26784 transport BP
## 27764 response to stress BP
## 28494 cell cycle BP
## 29244 cell communication BP
## 29354 signal transduction BP
## 30094 cell-cell signaling BP
## 30164 multicellular organism development BP
## 32964 behavior BP
## 33544 biological_process BP
## 33554 metabolic process BP
## 33764 cell death BP
## 34664 catabolic process BP
## 34684 biosynthetic process BP
## 37744 response to external stimulus BP
## 37754 tropism BP
## 37764 response to biotic stimulus BP
## 37914 response to abiotic stimulus BP
## 38134 anatomical structure morphogenesis BP
## 38594 response to endogenous stimulus BP
## 39234 embryo development BP
## 39244 post-embryonic development BP
## 39634 fruit ripening BP
## 39664 abscission BP
## 39784 pollination BP
## 39924 pollen-pistil interaction BP
## 40164 flower development BP
## 40634 cellular process BP
## 40674 response to extracellular stimulus BP
## 54064 photosynthesis BP
## 54264 cellular component organization BP
## 54314 cell growth BP
## 65164 protein metabolic process BP
## 66804 cellular homeostasis BP
## 66954 secondary metabolic process BP
## 74134 cell differentiation BP
## 110844 growth BP
## 111054 regulation of gene expression, epigenetic BP
## 114 <NA> BP
## 2174 cellular_component CC
## 2184 extracellular region CC
## 2544 extracellular space CC
## 2564 cell wall CC
## 2594 intracellular CC
## 2604 cell CC
## 2664 nucleus CC
## 2674 nuclear envelope CC
## 2764 nucleoplasm CC
## 3334 nucleolus CC
## 3374 cytoplasm CC
## 3384 mitochondrion CC
## 3604 lysosome CC
## 3644 endosome CC
## 3684 vacuole CC
## 3724 peroxisome CC
## 3777 endoplasmic reticulum CC
## 3874 Golgi apparatus CC
## 4094 cytosol CC
## 4184 ribosome CC
## 4304 cytoskeleton CC
## 4534 plasma membrane CC
## 6614 plastid CC
## 6864 thylakoid CC
## 7654 membrane CC
## 9934 external encapsulating structure CC
## 10954 extracellular matrix CC
## SampleKeys
## 314 NA
## 4224 AT2G46900 AT1G15825 AT4G12735 AT1G19394 AT1G65481 AT5G22540 AT1G29430 AT1G52855 AT5G18030 AT4G35655 AT3G09162 AT5G06220 AT1G51402 AT4G30662 AT1G13930 AT5G49280 AT2G14610 AT3G27809 AT1G18265 AT1G29510 AT3G17120 AT4G32920 AT2G42760 AT1G29440 AT1G71110 AT1G18010 AT3G13437 AT1G18000 AT5G64190 AT1G52342 AT3G19690 AT1G72645 ATMG00030 AT1G72410 AT4G02360 AT5G14090 AT1G51400 AT1G10657 AT3G27415 AT5G41761 AT2G36430 AT1G29500 AT5G44005 AT5G56100 AT3G19615 AT1G25275 AT5G18080 AT1G19960 AT1G29460 AT3G55060 AT2G01008 AT3G27416 AT1G72430 AT1G22180 AT1G04490
## 4234 NA
## 4244 NA
## 4284 NA
## 4394 NA
## 4484 NA
## 4614 NA
## 4694 NA
## 9654 NA
## 14164 NA
## 14874 NA
## 14944 NA
## 16244 NA
## 16364 NA
## 17184 NA
## 17904 NA
## 29744 NA
## 31594 NA
## 32004 NA
## 39564 NA
## 41134 NA
## 41154 NA
## 58354 NA
## 64644 NA
## 108234 NA
## 16 AT1G01010, AT1G01190, AT1G01390, AT1G01640, AT1G01680, AT1G01690, AT1G02520, AT1G02610, AT1G02660, AT1G03010, AT1G03130, AT1G03200, AT1G03600, AT1G03630, AT1G03680, AT1G03990, AT1G04250, AT1G04310, AT1G04600, AT1G04770, AT1G05100, AT1G05675, AT1G05840, AT1G06040, AT1G06460, AT1G06620, AT1G06680, AT1G07050, AT1G07280, AT1G07440, AT1G07500, AT1G07570, AT1G08050, AT1G08380, AT1G09310, AT1G09340, AT1G09350, AT1G09930, AT1G09932, AT1G10020, AT1G10150, AT1G10586, AT1G10760, AT1G10960, AT1G11400, AT1G12090, AT1G12160, AT1G12380, AT1G12540, AT1G12710, AT1G12730, AT1G12845, AT1G12900, AT1G13150, AT1G13245, AT1G13260, AT1G13310, AT1G13330, AT1G13340, AT1G13650, AT1G13830, AT1G14150, AT1G14160, AT1G14200, AT1G14250, AT1G14345, AT1G14700, AT1G14740, AT1G15350, AT1G15810, AT1G15820, AT1G15830, AT1G15980, AT1G15990, AT1G17147, AT1G17380, AT1G17750, AT1G17830, AT1G17970, AT1G18020, AT1G18200, AT1G18330, AT1G18485, AT1G18870, AT1G19150, AT1G19180, AT1G19540, AT1G19640, AT1G19650, AT1G19680, AT1G20010, AT1G20020, AT1G20310, AT1G20340, AT1G20460, AT1G21130, AT1G21240, AT1G21500, AT1G21550, AT1G21740, AT1G21910, AT1G22220, AT1G22370, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23060, AT1G23390, AT1G23740, AT1G23850, AT1G24020, AT1G25400, AT1G25560, AT1G26730, AT1G26770, AT1G26800, AT1G26930, AT1G27330, AT1G27480, AT1G28130, AT1G28370, AT1G29640, AT1G29670, AT1G29910, AT1G29920, AT1G30100, AT1G30160, AT1G30380, AT1G30850, AT1G31120, AT1G31330, AT1G31690, AT1G31770, AT1G31900, AT1G32060, AT1G32080, AT1G32220, AT1G32870, AT1G33110, AT1G33170, AT1G33475, AT1G33600, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G35140, AT1G36370, AT1G37130, AT1G43160, AT1G43245, AT1G43310, AT1G43670, AT1G43910, AT1G44130, AT1G44446, AT1G44575, AT1G47510, AT1G47890, AT1G48315, AT1G48320, AT1G48605, AT1G49200, AT1G49520, AT1G49530, AT1G50590, AT1G51080, AT1G51110, AT1G51610, AT1G51760, AT1G51780, AT1G51805, AT1G51860, AT1G52030, AT1G52200, AT1G52220, AT1G52230, AT1G52510, AT1G52565, AT1G52890, AT1G53163, AT1G53830, AT1G54010, AT1G54030, AT1G54095, AT1G54410, AT1G54780, AT1G54790, AT1G54820, AT1G55330, AT1G55370, AT1G55450, AT1G55610, AT1G55670, AT1G56300, AT1G56340, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G57990, AT1G58030, AT1G59640, AT1G59860, AT1G60190, AT1G60730, AT1G60800, AT1G61110, AT1G61120, AT1G61190, AT1G61215, AT1G61260, AT1G61300, AT1G61340, AT1G61520, AT1G61550, AT1G62520, AT1G63840, AT1G64760, AT1G64770, AT1G65230, AT1G65390, AT1G65690, AT1G65730, AT1G65845, AT1G65890, AT1G66130, AT1G66230, AT1G66280, AT1G66350, AT1G66910, AT1G66930, AT1G66960, AT1G67340, AT1G67420, AT1G67590, AT1G67635, AT1G67740, AT1G67820, AT1G67910, AT1G68050, AT1G68110, AT1G68840, AT1G69140, AT1G69260, AT1G69360, AT1G69480, AT1G69530, AT1G69570, AT1G69572, AT1G69830, AT1G69890, AT1G70090, AT1G70420, AT1G70580, AT1G70690, AT1G70790, AT1G70820, AT1G71000, AT1G71030, AT1G71390, AT1G71970, AT1G72210, AT1G72416, AT1G72540, AT1G72600, AT1G72610, AT1G72640, AT1G72700, AT1G72770, AT1G73130, AT1G73210, AT1G73470, AT1G73480, AT1G73600, AT1G73602, AT1G73750, AT1G73870, AT1G74070, AT1G74100, AT1G74430, AT1G74710, AT1G74730, AT1G74940, AT1G75280, AT1G75450, AT1G75540, AT1G75580, AT1G75690, AT1G75900, AT1G76080, AT1G76100, AT1G76600, AT1G76620, AT1G76640, AT1G76690, AT1G76980, AT1G77210, AT1G77280, AT1G77760, AT1G78000, AT1G78290, AT1G78600, AT1G78780, AT1G78830, AT1G78990, AT1G78995, AT1G79270, AT1G79310, AT1G79330, AT1G80110, AT1G80280, AT1G80440, AT1G80590, AT1G80840, AT1G80920, AT2G01010, AT2G01020, AT2G01590, AT2G01755, AT2G01830, AT2G01870, AT2G01890, AT2G01918, AT2G02070, AT2G02340, AT2G02450, AT2G03310, AT2G03410, AT2G03420, AT2G03440, AT2G03550, AT2G03750, AT2G04070, AT2G04430, AT2G04450, AT2G04790, AT2G04795, AT2G05070, AT2G05100, AT2G05160, AT2G05940, AT2G06255, AT2G06520, AT2G13360, AT2G14620, AT2G15090, AT2G15760, AT2G15890, AT2G15970, AT2G16270, AT2G16365, AT2G16650, AT2G16720, AT2G17230, AT2G17500, AT2G17880, AT2G18160, AT2G18162, AT2G18300, AT2G18350, AT2G18560, AT2G18660, AT2G18700, AT2G19310, AT2G20110, AT2G20142, AT2G21130, AT2G21188, AT2G21320, AT2G21330, AT2G21970, AT2G22200, AT2G22330, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G23170, AT2G23290, AT2G23840, AT2G24240, AT2G24550, AT2G24580, AT2G24645, AT2G25200, AT2G25690, AT2G25735, AT2G25900, AT2G26150, AT2G26300, AT2G26390, AT2G26400, AT2G26480, AT2G26560, AT2G26710, AT2G26870, AT2G27228, AT2G27230, AT2G27300, AT2G27385, AT2G27420, AT2G28110, AT2G28120, AT2G28450, AT2G28570, AT2G28605, AT2G28900, AT2G29100, AT2G29170, AT2G29290, AT2G29300, AT2G29310, AT2G29360, AT2G29630, AT2G29650, AT2G29750, AT2G30020, AT2G30070, AT2G30150, AT2G30420, AT2G30540, AT2G30570, AT2G30615, AT2G30770, AT2G30820, AT2G30830, AT2G31040, AT2G31180, AT2G31945, AT2G32100, AT2G32130, AT2G32140, AT2G32460, AT2G32500, AT2G32640, AT2G32930, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34410, AT2G34420, AT2G34430, AT2G34620, AT2G35660, AT2G35940, AT2G35945, AT2G35950, AT2G36145, AT2G36390, AT2G36640, AT2G37070, AT2G37440, AT2G37530, AT2G37540, AT2G37585, AT2G37750, AT2G37950, AT2G38240, AT2G38250, AT2G38400, AT2G38480, AT2G38490, AT2G38500, AT2G38760, AT2G38800, AT2G39300, AT2G39400, AT2G39435, AT2G39730, AT2G39800, AT2G39900, AT2G39980, AT2G40000, AT2G40080, AT2G40100, AT2G40150, AT2G40200, AT2G40330, AT2G40340, AT2G40460, AT2G40550, AT2G40610, AT2G40670, AT2G40840, AT2G40960, AT2G41070, AT2G41430, AT2G42060, AT2G42485, AT2G42530, AT2G42540, AT2G42890, AT2G43000, AT2G43010, AT2G43120, AT2G43290, AT2G43320, AT2G43570, AT2G43620, AT2G43680, AT2G44130, AT2G44490, AT2G44578, AT2G44600, AT2G44840, AT2G44940, AT2G45180, AT2G45245, AT2G45560, AT2G45760, AT2G45850, AT2G45920, AT2G46040, AT2G46240, AT2G46400, AT2G46410, AT2G46510, AT2G46520, AT2G46660, AT2G46790, AT2G46820, AT2G46830, AT2G46970, AT2G47000, AT2G47420, AT2G47770, AT2G47820, AT2G47920, AT2G47950, AT3G01060, AT3G01440, AT3G01500, AT3G01770, AT3G01810, AT3G02210, AT3G02550, AT3G02730, AT3G02885, AT3G02990, AT3G03310, AT3G03440, AT3G04000, AT3G04210, AT3G04300, AT3G04380, AT3G04420, AT3G05500, AT3G06020, AT3G06070, AT3G06145, AT3G06160, AT3G06490, AT3G06890, AT3G07200, AT3G07310, AT3G07320, AT3G07350, AT3G08000, AT3G08920, AT3G08940, AT3G09440, AT3G09580, AT3G09600, AT3G09960, AT3G10020, AT3G10060, AT3G10520, AT3G10720, AT3G10815, AT3G10940, AT3G11090, AT3G11110, AT3G11210, AT3G11450, AT3G11480, AT3G12860, AT3G12920, AT3G13080, AT3G13100, AT3G13380, AT3G13470, AT3G13610, AT3G13730, AT3G14200, AT3G14440, AT3G14680, AT3G14700, AT3G14870, AT3G15536, AT3G15570, AT3G15630, AT3G15840, AT3G15950, AT3G16130, AT3G16250, AT3G16310, AT3G16460, AT3G16620, AT3G17280, AT3G17390, AT3G17420, AT3G17510, AT3G17640, AT3G17690, AT3G17840, AT3G17860, AT3G18050, AT3G18080, AT3G18500, AT3G18710, AT3G18773, AT3G18890, AT3G19000, AT3G19002, AT3G19100, AT3G19680, AT3G19970, AT3G20250, AT3G21055, AT3G21080, AT3G21320, AT3G21500, AT3G21670, AT3G21700, AT3G21780, AT3G21950, AT3G22160, AT3G22210, AT3G22275, AT3G22290, AT3G23880, AT3G24430, AT3G24515, AT3G24518, AT3G24520, AT3G25010, AT3G25120, AT3G25510, AT3G25670, AT3G25890, AT3G26180, AT3G26290, AT3G26440, AT3G26470, AT3G26510, AT3G26740, AT3G27170, AT3G27690, AT3G27810, AT3G27870, AT3G28510, AT3G28580, AT3G29320, AT3G29330, AT3G43250, AT3G44300, AT3G44717, AT3G45970, AT3G46370, AT3G46630, AT3G46640, AT3G46658, AT3G46660, AT3G46780, AT3G46970, AT3G47070, AT3G47420, AT3G47460, AT3G47470, AT3G47480, AT3G47500, AT3G47730, AT3G48090, AT3G48100, AT3G48115, AT3G48200, AT3G48280, AT3G48420, AT3G48520, AT3G48580, AT3G48630, AT3G48700, AT3G48720, AT3G48780, AT3G49570, AT3G49580, AT3G49790, AT3G50060, AT3G50770, AT3G50820, AT3G50840, AT3G50920, AT3G50930, AT3G50960, AT3G51080, AT3G51090, AT3G51400, AT3G51470, AT3G51670, AT3G51750, AT3G51860, AT3G52070, AT3G52072, AT3G52180, AT3G52430, AT3G52960, AT3G53210, AT3G53470, AT3G53800, AT3G53830, AT3G54320, AT3G54366, AT3G54490, AT3G54500, AT3G54890, AT3G55240, AT3G55500, AT3G55580, AT3G55630, AT3G55760, AT3G55800, AT3G55970, AT3G56160, AT3G56170, AT3G56260, AT3G56290, AT3G56940, AT3G57260, AT3G57380, AT3G57460, AT3G57740, AT3G57950, AT3G59060, AT3G59750, AT3G59870, AT3G59900, AT3G59930, AT3G59940, AT3G60390, AT3G60420, AT3G60470, AT3G60490, AT3G60961, AT3G60966, AT3G61060, AT3G61190, AT3G61198, AT3G61420, AT3G61430, AT3G61450, AT3G61470, AT3G61550, AT3G61760, AT3G61870, AT3G61890, AT3G61930, AT3G62410, AT3G62550, AT3G62950, AT3G63010, AT3G63140, AT3G63160, AT3G63380, AT4G00165, AT4G00700, AT4G00970, AT4G01330, AT4G01430, AT4G01535, AT4G01540, AT4G01670, AT4G02075, AT4G02380, AT4G02760, AT4G02770, AT4G03400, AT4G03460, AT4G03510, AT4G04020, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04810, AT4G04830, AT4G05010, AT4G05020, AT4G05070, AT4G05100, AT4G05180, AT4G06534, AT4G06744, AT4G08950, AT4G09010, AT4G09650, AT4G09750, AT4G09760, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10500, AT4G11240, AT4G11300, AT4G11350, AT4G11360, AT4G11521, AT4G11990, AT4G12320, AT4G12330, AT4G12390, AT4G12480, AT4G12490, AT4G12500, AT4G12720, AT4G12800, AT4G12830, AT4G12900, AT4G12980, AT4G13010, AT4G13340, AT4G13810, AT4G14270, AT4G14560, AT4G14630, AT4G14830, AT4G15210, AT4G15233, AT4G15248, AT4G15280, AT4G15417, AT4G15430, AT4G15780, AT4G15975, AT4G16146, AT4G16260, AT4G16350, AT4G16515, AT4G16880, AT4G16980, AT4G17100, AT4G17460, AT4G17660, AT4G17670, AT4G17730, AT4G17810, AT4G18205, AT4G18220, AT4G19170, AT4G19530, AT4G20320, AT4G20820, AT4G20840, AT4G21280, AT4G21445, AT4G21680, AT4G21790, AT4G21870, AT4G21990, AT4G22070, AT4G22560, AT4G22690, AT4G22890, AT4G23150, AT4G23180, AT4G23300, AT4G23310, AT4G23420, AT4G23800, AT4G23810, AT4G24240, AT4G25290, AT4G25390, AT4G25433, AT4G25480, AT4G25810, AT4G25940, AT4G26080, AT4G26120, AT4G26470, AT4G26520, AT4G26530, AT4G27030, AT4G27310, AT4G27440, AT4G27590, AT4G27700, AT4G27860, AT4G27870, AT4G28240, AT4G28270, AT4G28703, AT4G28750, AT4G29190, AT4G29380, AT4G29740, AT4G29930, AT4G30180, AT4G30650, AT4G32280, AT4G32340, AT4G32590, AT4G32980, AT4G33010, AT4G33150, AT4G33490, AT4G33625, AT4G33660, AT4G33980, AT4G34200, AT4G34220, AT4G34250, AT4G34630, AT4G34650, AT4G34900, AT4G35600, AT4G35720, AT4G36010, AT4G36040, AT4G36430, AT4G36530, AT4G36640, AT4G36780, AT4G36950, AT4G37110, AT4G37260, AT4G37390, AT4G37610, AT4G37850, AT4G37900, AT4G37925, AT4G38550, AT4G38552, AT4G38560, AT4G38770, AT4G39030, AT4G39190, AT4G39260, AT4G39580, AT4G39710, AT4G39730, AT4G39950, AT5G01015, AT5G01520, AT5G01530, AT5G01840, AT5G01850, AT5G02100, AT5G02160, AT5G02170, AT5G02180, AT5G02760, AT5G02810, AT5G02890, AT5G03210, AT5G03285, AT5G03360, AT5G03435, AT5G03668, AT5G03670, AT5G03680, AT5G04860, AT5G04950, AT5G05090, AT5G05330, AT5G05440, AT5G05580, AT5G05680, AT5G05890, AT5G06110, AT5G06230, AT5G06290, AT5G06610, AT5G06690, AT5G06980, AT5G07580, AT5G07650, AT5G08150, AT5G08410, AT5G08620, AT5G09660, AT5G10250, AT5G10340, AT5G10380, AT5G10690, AT5G11070, AT5G11210, AT5G11242, AT5G11390, AT5G11870, AT5G12110, AT5G12950, AT5G13210, AT5G13220, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14390, AT5G14700, AT5G14760, AT5G15190, AT5G16170, AT5G16350, AT5G16360, AT5G16370, AT5G16400, AT5G16810, AT5G17330, AT5G17490, AT5G17760, AT5G18660, AT5G19110, AT5G19120, AT5G19190, AT5G19940, AT5G20250, AT5G20700, AT5G20960, AT5G21280, AT5G21430, AT5G21940, AT5G21950, AT5G22545, AT5G22630, AT5G22920, AT5G23160, AT5G23210, AT5G23235, AT5G23240, AT5G23360, AT5G23380, AT5G23590, AT5G24090, AT5G24120, AT5G24155, AT5G24200, AT5G24240, AT5G24280, AT5G24290, AT5G24300, AT5G24460, AT5G24470, AT5G24660, AT5G24890, AT5G24910, AT5G25130, AT5G25240, AT5G25280, AT5G26170, AT5G26220, AT5G26230, AT5G26270, AT5G26920, AT5G27290, AT5G28610, AT5G28630, AT5G28910, AT5G28919, AT5G28920, AT5G33355, AT5G35480, AT5G35970, AT5G38130, AT5G38250, AT5G38350, AT5G38410, AT5G38510, AT5G38980, AT5G38990, AT5G39020, AT5G39080, AT5G39210, AT5G39530, AT5G39610, AT5G39670, AT5G39860, AT5G40210, AT5G40500, AT5G41050, AT5G41180, AT5G41315, AT5G41610, AT5G41612, AT5G41730, AT5G42050, AT5G42200, AT5G43170, AT5G43440, AT5G43750, AT5G44060, AT5G44070, AT5G44260, AT5G44350, AT5G44380, AT5G44390, AT5G44410, AT5G44460, AT5G44680, AT5G44990, AT5G45070, AT5G45080, AT5G45090, AT5G45110, AT5G45630, AT5G45670, AT5G45680, AT5G45820, AT5G45830, AT5G46110, AT5G46220, AT5G46410, AT5G46600, AT5G46840, AT5G47370, AT5G47960, AT5G48400, AT5G48410, AT5G48545, AT5G48570, AT5G48850, AT5G48880, AT5G49100, AT5G49448, AT5G49450, AT5G49560, AT5G49730, AT5G49900, AT5G50450, AT5G50740, AT5G51380, AT5G51460, AT5G51550, AT5G51720, AT5G51910, AT5G52100, AT5G52720, AT5G52730, AT5G52882, AT5G53290, AT5G53360, AT5G54145, AT5G54148, AT5G54240, AT5G54270, AT5G54280, AT5G54585, AT5G54700, AT5G54770, AT5G55740, AT5G56010, AT5G56050, AT5G56544, AT5G56550, AT5G56880, AT5G57170, AT5G57320, AT5G57560, AT5G57660, AT5G58310, AT5G58570, AT5G58620, AT5G59130, AT5G59220, AT5G59480, AT5G59580, AT5G59590, AT5G59780, AT5G60100, AT5G60270, AT5G60310, AT5G60400, AT5G60680, AT5G60800, AT5G60890, AT5G61160, AT5G61270, AT5G61350, AT5G61440, AT5G61590, AT5G61600, AT5G61900, AT5G61960, AT5G62140, AT5G62150, AT5G62190, AT5G62280, AT5G62430, AT5G62480, AT5G62720, AT5G62730, AT5G62920, AT5G63140, AT5G63225, AT5G63380, AT5G63450, AT5G63700, AT5G63780, AT5G63820, AT5G64040, AT5G64170, AT5G64530, AT5G64570, AT5G64572, AT5G64700, AT5G64810, AT5G65207, AT5G65280, AT5G65380, AT5G66052, AT5G66053, AT5G66170, AT5G66520, AT5G66570, AT5G66580, AT5G66630, AT5G66650, AT5G67080, AT5G67160, AT5G67200, AT5G67370, AT5G67420, ATCG00010, ATCG00020, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01060, ATCG01160, ATCG01170, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020
## 35 NA
## 19944 NA
## 21064 NA
## 21364 NA
## 22364 NA
## 23464 NA
## 23824 NA
## 25254 NA
## 26784 NA
## 27764 NA
## 28494 NA
## 29244 NA
## 29354 NA
## 30094 NA
## 30164 NA
## 32964 NA
## 33544 AT3G51750 AT2G01755 AT1G15825 AT4G11300 AT1G20310 AT5G66052 AT3G22290 AT4G12735 AT1G65230 AT1G73130 AT5G20700 AT1G19394 AT2G47820 AT5G28919 AT2G36145 AT3G06070 AT4G16980 AT1G65481 AT5G40500 AT5G39530 AT5G22540 AT3G22210 AT3G11090 AT4G14830 AT5G54145 AT3G53470 AT4G33625 AT3G21080 AT1G52565 AT2G32500 AT1G76640 AT5G21950 AT1G52855 AT5G23160 AT1G55330 AT4G35655 AT3G29330 AT3G09162 AT1G65845 AT1G52220 AT1G54095 AT5G06220 AT3G15630 AT1G78780 AT4G16146 AT5G25280 AT2G16270 AT1G09310 AT5G28910 AT1G13310 AT1G51402 AT3G43250 AT2G44600 AT1G03200 AT3G49790 AT1G61260 AT1G69360 AT5G04860 AT2G25690 AT3G51090 AT3G23880 AT2G44578 AT4G28240 AT5G62280 AT5G11390 AT4G30662 AT2G03420 AT4G39190 AT5G11070 AT5G26270 AT1G18485 AT3G07310 AT3G08000 AT5G49280 AT1G61215 AT4G22560 AT2G40960 AT1G67910 AT1G17830 AT5G54585 AT3G27809 AT1G21550 AT5G38980 AT1G18265 AT2G43290 AT2G01870 AT3G26740 AT2G37750 AT1G78995 AT5G63225 AT5G24460 AT3G21320 AT5G41050 AT2G31945 AT3G17120 AT4G32920 AT1G10020 AT5G14390 AT5G22545 AT2G24550 AT2G42760 AT1G73470 AT5G01015 AT1G51080 AT3G52070 AT4G17670 AT3G47480 AT1G71110 AT3G59870 AT3G61870 AT5G62720 AT3G06890 AT3G13437 AT1G12845 AT1G15830 AT3G48200 AT1G13650 AT3G60966 AT2G27385 AT5G28630 AT5G56880 AT5G64190 AT1G52342 AT4G01670 AT5G54240 AT3G04300 AT2G38500 AT5G44350 AT4G16880 AT2G39300 AT4G02760 AT5G15190 AT3G08920 AT5G58570 AT2G30615 AT4G05070 AT3G19690 AT3G17280 AT1G72645 ATMG00030 AT1G72410 AT1G07280 AT5G10690 AT4G02360 AT2G03410 AT5G24890 AT1G76980 AT2G28570 AT1G10657 AT3G27415 AT5G44990 AT5G41761 AT3G19970 AT1G73210 AT2G03310 AT5G25240 AT3G57950 AT3G50770 AT4G01535 AT5G44005 AT1G12380 AT3G19615 AT3G22160 AT5G02160 AT1G30850 AT5G39670 AT1G19960 AT5G23360 AT3G10815 AT2G37070 AT5G65207 AT5G28610 AT1G27330 AT3G56260 AT4G05010 AT2G47950 AT1G07050 AT2G25200 AT3G48630 AT5G44060 AT3G06145 AT2G05160 AT3G55060 AT1G71970 AT5G56050 AT1G23060 AT2G01008 AT5G35480 AT2G25735 AT4G00700 AT1G09932 AT2G04790 AT3G27416 AT2G30820 AT1G62520 AT3G63160 AT1G23850 AT5G19190 AT4G34630 AT5G54700 AT3G53830 AT5G23380 AT5G28920 AT1G20460 AT3G18050 AT5G49100 AT3G49570 AT2G15760 AT1G22180 AT5G19940 AT1G25400 AT1G04490 AT1G17147 AT1G50590 AT5G60400 AT1G67590 AT3G26470
## 33554 NA
## 33764 NA
## 34664 NA
## 34684 NA
## 37744 NA
## 37754 NA
## 37764 NA
## 37914 NA
## 38134 NA
## 38594 NA
## 39234 NA
## 39244 NA
## 39634 NA
## 39664 NA
## 39784 NA
## 39924 NA
## 40164 NA
## 40634 NA
## 40674 NA
## 54064 NA
## 54264 NA
## 54314 NA
## 65164 NA
## 66804 NA
## 66954 NA
## 74134 NA
## 110844 NA
## 111054 NA
## 114 AT1G01010, AT1G01190, AT1G01390, AT1G01640, AT1G01680, AT1G01690, AT1G02520, AT1G02610, AT1G02660, AT1G03010, AT1G03130, AT1G03600, AT1G03630, AT1G03680, AT1G03990, AT1G04250, AT1G04310, AT1G04600, AT1G04770, AT1G05100, AT1G05675, AT1G05840, AT1G06040, AT1G06460, AT1G06620, AT1G06680, AT1G07440, AT1G07500, AT1G07570, AT1G08050, AT1G08380, AT1G09340, AT1G09350, AT1G09930, AT1G10150, AT1G10586, AT1G10760, AT1G10960, AT1G11400, AT1G12090, AT1G12160, AT1G12540, AT1G12710, AT1G12730, AT1G12900, AT1G13150, AT1G13245, AT1G13260, AT1G13330, AT1G13340, AT1G13830, AT1G13930, AT1G14150, AT1G14160, AT1G14200, AT1G14250, AT1G14345, AT1G14700, AT1G14740, AT1G15350, AT1G15810, AT1G15820, AT1G15980, AT1G15990, AT1G17380, AT1G17750, AT1G17970, AT1G18000, AT1G18010, AT1G18020, AT1G18200, AT1G18330, AT1G18870, AT1G19150, AT1G19180, AT1G19540, AT1G19640, AT1G19650, AT1G19680, AT1G20010, AT1G20020, AT1G20340, AT1G21130, AT1G21240, AT1G21500, AT1G21740, AT1G21910, AT1G22220, AT1G22370, AT1G22590, AT1G22630, AT1G22690, AT1G22770, AT1G23390, AT1G23740, AT1G24020, AT1G25275, AT1G25560, AT1G26730, AT1G26770, AT1G26800, AT1G26930, AT1G27480, AT1G28130, AT1G28370, AT1G29430, AT1G29440, AT1G29460, AT1G29500, AT1G29510, AT1G29640, AT1G29670, AT1G29910, AT1G29920, AT1G30100, AT1G30160, AT1G30380, AT1G31120, AT1G31330, AT1G31690, AT1G31770, AT1G31900, AT1G32060, AT1G32080, AT1G32220, AT1G32870, AT1G33110, AT1G33170, AT1G33475, AT1G33600, AT1G33950, AT1G33960, AT1G34180, AT1G34420, AT1G35140, AT1G36370, AT1G37130, AT1G43160, AT1G43245, AT1G43310, AT1G43670, AT1G43910, AT1G44130, AT1G44446, AT1G44575, AT1G47510, AT1G47890, AT1G48315, AT1G48320, AT1G48605, AT1G49200, AT1G49520, AT1G49530, AT1G51110, AT1G51400, AT1G51610, AT1G51760, AT1G51780, AT1G51805, AT1G51860, AT1G52030, AT1G52200, AT1G52230, AT1G52510, AT1G52890, AT1G53163, AT1G53830, AT1G54010, AT1G54030, AT1G54410, AT1G54780, AT1G54790, AT1G54820, AT1G55370, AT1G55450, AT1G55610, AT1G55670, AT1G56300, AT1G56340, AT1G57560, AT1G57590, AT1G57630, AT1G57650, AT1G57990, AT1G58030, AT1G59640, AT1G59860, AT1G60190, AT1G60730, AT1G60800, AT1G61110, AT1G61120, AT1G61190, AT1G61300, AT1G61340, AT1G61520, AT1G61550, AT1G63840, AT1G64760, AT1G64770, AT1G65390, AT1G65690, AT1G65730, AT1G65890, AT1G66130, AT1G66230, AT1G66280, AT1G66350, AT1G66910, AT1G66930, AT1G66960, AT1G67340, AT1G67420, AT1G67635, AT1G67740, AT1G67820, AT1G68050, AT1G68110, AT1G68840, AT1G69140, AT1G69260, AT1G69480, AT1G69530, AT1G69570, AT1G69572, AT1G69830, AT1G69890, AT1G70090, AT1G70420, AT1G70580, AT1G70690, AT1G70790, AT1G70820, AT1G71000, AT1G71030, AT1G71390, AT1G72210, AT1G72416, AT1G72430, AT1G72540, AT1G72600, AT1G72610, AT1G72640, AT1G72700, AT1G72770, AT1G73480, AT1G73600, AT1G73602, AT1G73750, AT1G73870, AT1G74070, AT1G74100, AT1G74430, AT1G74710, AT1G74730, AT1G74940, AT1G75280, AT1G75450, AT1G75540, AT1G75580, AT1G75690, AT1G75900, AT1G76080, AT1G76100, AT1G76600, AT1G76620, AT1G76690, AT1G77210, AT1G77280, AT1G77760, AT1G78000, AT1G78290, AT1G78600, AT1G78830, AT1G78990, AT1G79270, AT1G79310, AT1G79330, AT1G80110, AT1G80280, AT1G80440, AT1G80590, AT1G80840, AT1G80920, AT2G01010, AT2G01020, AT2G01590, AT2G01830, AT2G01890, AT2G01918, AT2G02070, AT2G02340, AT2G02450, AT2G03440, AT2G03550, AT2G03750, AT2G04070, AT2G04430, AT2G04450, AT2G04795, AT2G05070, AT2G05100, AT2G05940, AT2G06255, AT2G06520, AT2G13360, AT2G14610, AT2G14620, AT2G15090, AT2G15890, AT2G15970, AT2G16365, AT2G16650, AT2G16720, AT2G17230, AT2G17500, AT2G17880, AT2G18160, AT2G18162, AT2G18300, AT2G18350, AT2G18560, AT2G18660, AT2G18700, AT2G19310, AT2G20110, AT2G20142, AT2G21130, AT2G21188, AT2G21320, AT2G21330, AT2G21970, AT2G22200, AT2G22330, AT2G22760, AT2G22770, AT2G22810, AT2G22830, AT2G23170, AT2G23290, AT2G23840, AT2G24240, AT2G24580, AT2G24645, AT2G25900, AT2G26150, AT2G26300, AT2G26390, AT2G26400, AT2G26480, AT2G26560, AT2G26710, AT2G26870, AT2G27228, AT2G27230, AT2G27300, AT2G27420, AT2G28110, AT2G28120, AT2G28450, AT2G28605, AT2G28900, AT2G29100, AT2G29170, AT2G29290, AT2G29300, AT2G29310, AT2G29360, AT2G29630, AT2G29650, AT2G29750, AT2G30020, AT2G30070, AT2G30150, AT2G30420, AT2G30540, AT2G30570, AT2G30770, AT2G30830, AT2G31040, AT2G31180, AT2G32100, AT2G32130, AT2G32140, AT2G32460, AT2G32640, AT2G32930, AT2G33830, AT2G34010, AT2G34070, AT2G34080, AT2G34410, AT2G34420, AT2G34430, AT2G34620, AT2G35660, AT2G35940, AT2G35945, AT2G35950, AT2G36390, AT2G36430, AT2G36640, AT2G37440, AT2G37530, AT2G37540, AT2G37585, AT2G37950, AT2G38240, AT2G38250, AT2G38400, AT2G38480, AT2G38490, AT2G38760, AT2G38800, AT2G39400, AT2G39435, AT2G39730, AT2G39800, AT2G39900, AT2G39980, AT2G40000, AT2G40080, AT2G40100, AT2G40150, AT2G40200, AT2G40330, AT2G40340, AT2G40460, AT2G40550, AT2G40610, AT2G40670, AT2G40840, AT2G41070, AT2G41430, AT2G42060, AT2G42485, AT2G42530, AT2G42540, AT2G42890, AT2G43000, AT2G43010, AT2G43120, AT2G43320, AT2G43570, AT2G43620, AT2G43680, AT2G44130, AT2G44490, AT2G44840, AT2G44940, AT2G45180, AT2G45245, AT2G45560, AT2G45760, AT2G45850, AT2G45920, AT2G46040, AT2G46240, AT2G46400, AT2G46410, AT2G46510, AT2G46520, AT2G46660, AT2G46790, AT2G46820, AT2G46830, AT2G46900, AT2G46970, AT2G47000, AT2G47420, AT2G47770, AT2G47920, AT3G01060, AT3G01440, AT3G01500, AT3G01770, AT3G01810, AT3G02210, AT3G02550, AT3G02730, AT3G02885, AT3G02990, AT3G03310, AT3G03440, AT3G04000, AT3G04210, AT3G04380, AT3G04420, AT3G05500, AT3G06020, AT3G06160, AT3G06490, AT3G07200, AT3G07320, AT3G07350, AT3G08940, AT3G09440, AT3G09580, AT3G09600, AT3G09960, AT3G10020, AT3G10060, AT3G10520, AT3G10720, AT3G10940, AT3G11110, AT3G11210, AT3G11450, AT3G11480, AT3G12860, AT3G12920, AT3G13080, AT3G13100, AT3G13380, AT3G13470, AT3G13610, AT3G13730, AT3G14200, AT3G14440, AT3G14680, AT3G14700, AT3G14870, AT3G15536, AT3G15570, AT3G15840, AT3G15950, AT3G16130, AT3G16250, AT3G16310, AT3G16460, AT3G16620, AT3G17390, AT3G17420, AT3G17510, AT3G17640, AT3G17690, AT3G17840, AT3G17860, AT3G18080, AT3G18500, AT3G18710, AT3G18773, AT3G18890, AT3G19000, AT3G19002, AT3G19100, AT3G19680, AT3G20250, AT3G21055, AT3G21500, AT3G21670, AT3G21700, AT3G21780, AT3G21950, AT3G22275, AT3G24430, AT3G24515, AT3G24518, AT3G24520, AT3G25010, AT3G25120, AT3G25510, AT3G25670, AT3G25890, AT3G26180, AT3G26290, AT3G26440, AT3G26510, AT3G27170, AT3G27690, AT3G27810, AT3G27870, AT3G28510, AT3G28580, AT3G29320, AT3G44300, AT3G44717, AT3G45970, AT3G46370, AT3G46630, AT3G46640, AT3G46658, AT3G46660, AT3G46780, AT3G46970, AT3G47070, AT3G47420, AT3G47460, AT3G47470, AT3G47500, AT3G47730, AT3G48090, AT3G48100, AT3G48115, AT3G48280, AT3G48420, AT3G48520, AT3G48580, AT3G48700, AT3G48720, AT3G48780, AT3G49580, AT3G50060, AT3G50820, AT3G50840, AT3G50920, AT3G50930, AT3G50960, AT3G51080, AT3G51400, AT3G51470, AT3G51670, AT3G51860, AT3G52072, AT3G52180, AT3G52430, AT3G52960, AT3G53210, AT3G53800, AT3G54320, AT3G54366, AT3G54490, AT3G54500, AT3G54890, AT3G55240, AT3G55500, AT3G55580, AT3G55630, AT3G55760, AT3G55800, AT3G55970, AT3G56160, AT3G56170, AT3G56290, AT3G56940, AT3G57260, AT3G57380, AT3G57460, AT3G57740, AT3G59060, AT3G59750, AT3G59900, AT3G59930, AT3G59940, AT3G60390, AT3G60420, AT3G60470, AT3G60490, AT3G60961, AT3G61060, AT3G61190, AT3G61198, AT3G61420, AT3G61430, AT3G61450, AT3G61470, AT3G61550, AT3G61760, AT3G61890, AT3G61930, AT3G62410, AT3G62550, AT3G62950, AT3G63010, AT3G63140, AT3G63380, AT4G00165, AT4G00970, AT4G01330, AT4G01430, AT4G01540, AT4G02075, AT4G02380, AT4G02770, AT4G03400, AT4G03460, AT4G03510, AT4G04020, AT4G04223, AT4G04330, AT4G04340, AT4G04490, AT4G04500, AT4G04510, AT4G04810, AT4G04830, AT4G05020, AT4G05100, AT4G05180, AT4G06534, AT4G06744, AT4G08950, AT4G09010, AT4G09650, AT4G09750, AT4G09760, AT4G09770, AT4G10120, AT4G10340, AT4G10390, AT4G10500, AT4G11240, AT4G11350, AT4G11360, AT4G11521, AT4G11990, AT4G12320, AT4G12330, AT4G12390, AT4G12480, AT4G12490, AT4G12500, AT4G12720, AT4G12800, AT4G12830, AT4G12900, AT4G12980, AT4G13010, AT4G13340, AT4G13810, AT4G14270, AT4G14560, AT4G14630, AT4G15210, AT4G15233, AT4G15248, AT4G15280, AT4G15417, AT4G15430, AT4G15780, AT4G15975, AT4G16260, AT4G16350, AT4G16515, AT4G17100, AT4G17460, AT4G17660, AT4G17730, AT4G17810, AT4G18205, AT4G18220, AT4G19170, AT4G19530, AT4G20320, AT4G20820, AT4G20840, AT4G21280, AT4G21445, AT4G21680, AT4G21790, AT4G21870, AT4G21990, AT4G22070, AT4G22690, AT4G22890, AT4G23150, AT4G23180, AT4G23300, AT4G23310, AT4G23420, AT4G23800, AT4G23810, AT4G24240, AT4G25290, AT4G25390, AT4G25433, AT4G25480, AT4G25810, AT4G25940, AT4G26080, AT4G26120, AT4G26470, AT4G26520, AT4G26530, AT4G27030, AT4G27310, AT4G27440, AT4G27590, AT4G27700, AT4G27860, AT4G27870, AT4G28270, AT4G28703, AT4G28750, AT4G29190, AT4G29380, AT4G29740, AT4G29930, AT4G30180, AT4G30650, AT4G32280, AT4G32340, AT4G32590, AT4G32980, AT4G33010, AT4G33150, AT4G33490, AT4G33660, AT4G33980, AT4G34200, AT4G34220, AT4G34250, AT4G34650, AT4G34900, AT4G35600, AT4G35720, AT4G36010, AT4G36040, AT4G36430, AT4G36530, AT4G36640, AT4G36780, AT4G36950, AT4G37110, AT4G37260, AT4G37390, AT4G37610, AT4G37850, AT4G37900, AT4G37925, AT4G38550, AT4G38552, AT4G38560, AT4G38770, AT4G39030, AT4G39260, AT4G39580, AT4G39710, AT4G39730, AT4G39950, AT5G01520, AT5G01530, AT5G01840, AT5G01850, AT5G02100, AT5G02170, AT5G02180, AT5G02760, AT5G02810, AT5G02890, AT5G03210, AT5G03285, AT5G03360, AT5G03435, AT5G03668, AT5G03670, AT5G03680, AT5G04950, AT5G05090, AT5G05330, AT5G05440, AT5G05580, AT5G05680, AT5G05890, AT5G06110, AT5G06230, AT5G06290, AT5G06610, AT5G06690, AT5G06980, AT5G07580, AT5G07650, AT5G08150, AT5G08410, AT5G08620, AT5G09660, AT5G10250, AT5G10340, AT5G10380, AT5G11210, AT5G11242, AT5G11870, AT5G12110, AT5G12950, AT5G13210, AT5G13220, AT5G13320, AT5G13630, AT5G13730, AT5G13820, AT5G14090, AT5G14700, AT5G14760, AT5G16170, AT5G16350, AT5G16360, AT5G16370, AT5G16400, AT5G16810, AT5G17330, AT5G17490, AT5G17760, AT5G18030, AT5G18080, AT5G18660, AT5G19110, AT5G19120, AT5G20250, AT5G20960, AT5G21280, AT5G21430, AT5G21940, AT5G22630, AT5G22920, AT5G23210, AT5G23235, AT5G23240, AT5G23590, AT5G24090, AT5G24120, AT5G24155, AT5G24200, AT5G24240, AT5G24280, AT5G24290, AT5G24300, AT5G24470, AT5G24660, AT5G24910, AT5G25130, AT5G26170, AT5G26220, AT5G26230, AT5G26920, AT5G27290, AT5G33355, AT5G35970, AT5G38130, AT5G38250, AT5G38350, AT5G38410, AT5G38510, AT5G38990, AT5G39020, AT5G39080, AT5G39210, AT5G39610, AT5G39860, AT5G40210, AT5G41180, AT5G41315, AT5G41610, AT5G41612, AT5G41730, AT5G42050, AT5G42200, AT5G43170, AT5G43440, AT5G43750, AT5G44070, AT5G44260, AT5G44380, AT5G44390, AT5G44410, AT5G44460, AT5G44680, AT5G45070, AT5G45080, AT5G45090, AT5G45110, AT5G45630, AT5G45670, AT5G45680, AT5G45820, AT5G45830, AT5G46110, AT5G46220, AT5G46410, AT5G46600, AT5G46840, AT5G47370, AT5G47960, AT5G48400, AT5G48410, AT5G48545, AT5G48570, AT5G48850, AT5G48880, AT5G49448, AT5G49450, AT5G49560, AT5G49730, AT5G49900, AT5G50450, AT5G50740, AT5G51380, AT5G51460, AT5G51550, AT5G51720, AT5G51910, AT5G52100, AT5G52720, AT5G52730, AT5G52882, AT5G53290, AT5G53360, AT5G54148, AT5G54270, AT5G54280, AT5G54770, AT5G55740, AT5G56010, AT5G56100, AT5G56544, AT5G56550, AT5G57170, AT5G57320, AT5G57560, AT5G57660, AT5G58310, AT5G58620, AT5G59130, AT5G59220, AT5G59480, AT5G59580, AT5G59590, AT5G59780, AT5G60100, AT5G60270, AT5G60310, AT5G60680, AT5G60800, AT5G60890, AT5G61160, AT5G61270, AT5G61350, AT5G61440, AT5G61590, AT5G61600, AT5G61900, AT5G61960, AT5G62140, AT5G62150, AT5G62190, AT5G62430, AT5G62480, AT5G62730, AT5G62920, AT5G63140, AT5G63380, AT5G63450, AT5G63700, AT5G63780, AT5G63820, AT5G64040, AT5G64170, AT5G64530, AT5G64570, AT5G64572, AT5G64700, AT5G64810, AT5G65280, AT5G65380, AT5G66053, AT5G66170, AT5G66520, AT5G66570, AT5G66580, AT5G66630, AT5G66650, AT5G67080, AT5G67160, AT5G67200, AT5G67370, AT5G67420, ATCG00010, ATCG00020, ATCG00140, ATCG00270, ATCG00280, ATCG00330, ATCG00340, ATCG00350, ATCG00490, ATCG00550, ATCG00680, ATCG00710, ATCG00720, ATCG00730, ATCG00920, ATCG00930, ATCG00940, ATCG00950, ATCG00960, ATCG00970, ATCG01060, ATCG01160, ATCG01170, ATCG01180, ATCG01190, ATCG01200, ATCG01210, ATCG01250, ATMG00020
## 2174 AT1G15825 AT4G11300 AT3G06070 AT4G11240 AT2G29360 AT1G61190 AT5G02890 AT1G13310 AT1G03200 AT5G14700 AT2G03440 AT5G62280 AT5G03360 AT5G66580 AT5G54585 AT3G27809 AT5G22545 AT1G12160 AT2G06255 AT4G09750 AT5G28630 AT5G54240 AT1G67635 AT5G25240 AT3G09960 AT5G39670 AT1G19960 AT5G65207 AT5G28610 AT3G48630 AT5G39080 AT3G57460 AT5G35480 AT3G53830 AT3G49570 AT1G75580
## 2184 NA
## 2544 NA
## 2564 NA
## 2594 NA
## 2604 NA
## 2664 NA
## 2674 NA
## 2764 NA
## 3334 NA
## 3374 NA
## 3384 NA
## 3604 NA
## 3644 NA
## 3684 NA
## 3724 NA
## 3777 NA
## 3874 NA
## 4094 NA
## 4184 NA
## 4304 NA
## 4534 NA
## 6614 NA
## 6864 NA
## 7654 NA
## 9934 NA
## 10954 NA
## [ reached getOption("max.print") -- omitted 1 row ]gos <- BatchResultslim
str(gos)## 'data.frame': 2626 obs. of 10 variables:
## $ CLID : Factor w/ 26 levels "M1-A1_up_down",..: 1 1 1 1 1 1 1 1 1 1 ...
## $ CLSZ : int 24 24 24 24 24 24 24 24 24 24 ...
## $ GOID : Factor w/ 44919 levels "GO:0000006","GO:0000007",..: 31 422 423 424 428 439 448 461 469 965 ...
## $ NodeSize : int 0 1851 0 0 0 0 0 0 0 0 ...
## $ SampleMatch: int 0 0 0 0 0 0 0 0 0 0 ...
## $ Phyper : num 1 1 1 1 1 1 1 1 1 1 ...
## $ Padj : num 1 1 1 1 1 1 1 1 1 1 ...
## $ Term : Factor w/ 44917 levels "'de novo' actin filament nucleation",..: 26007 20704 25895 10137 7484 10138 39465 20851 5722 25890 ...
## $ Ont : Factor w/ 4 levels "BP","CC","MF",..: 3 3 3 3 3 3 3 3 3 3 ...
## $ SampleKeys : Factor w/ 145 levels "NA","AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, A"| __truncated__,..: 1 1 1 1 1 1 1 1 1 1 ...gos## CLID CLSZ GOID NodeSize SampleMatch Phyper Padj
## 31 M1-A1_up_down 24 GO:0000166 0 0 1 1
## 422 M1-A1_up_down 24 GO:0003674 1851 0 1 1
## 423 M1-A1_up_down 24 GO:0003676 0 0 1 1
## 424 M1-A1_up_down 24 GO:0003677 0 0 1 1
## 428 M1-A1_up_down 24 GO:0003682 0 0 1 1
## 439 M1-A1_up_down 24 GO:0003700 0 0 1 1
## 448 M1-A1_up_down 24 GO:0003723 0 0 1 1
## 461 M1-A1_up_down 24 GO:0003774 0 0 1 1
## 469 M1-A1_up_down 24 GO:0003824 0 0 1 1
## 965 M1-A1_up_down 24 GO:0004518 0 0 1 1
## 1416 M1-A1_up_down 24 GO:0005102 0 0 1 1
## 1487 M1-A1_up_down 24 GO:0005198 0 0 1 1
## 1494 M1-A1_up_down 24 GO:0005215 0 0 1 1
## 1624 M1-A1_up_down 24 GO:0005488 0 0 1 1
## 1636 M1-A1_up_down 24 GO:0005515 0 0 1 1
## 1718 M1-A1_up_down 24 GO:0008135 0 0 1 1
## 1790 M1-A1_up_down 24 GO:0008289 0 0 1 1
## 2974 M1-A1_up_down 24 GO:0016301 0 0 1 1
## 3159 M1-A1_up_down 24 GO:0016740 0 0 1 1
## 3200 M1-A1_up_down 24 GO:0016787 0 0 1 1
## 3956 M1-A1_up_down 24 GO:0019825 0 0 1 1
## 4113 M1-A1_up_down 24 GO:0030234 0 0 1 1
## 4115 M1-A1_up_down 24 GO:0030246 0 0 1 1
## 5835 M1-A1_up_down 24 GO:0038023 0 0 1 1
## 6464 M1-A1_up_down 24 GO:0045182 0 0 1 1
## 10823 M1-A1_up_down 24 GO:0140110 0 0 1 1
## 1 M1-A1_up_down 24 no_annot_MF NA 24 NA NA
## 3 M1-A1_up_down 24 GO:0000003 0 0 1 1
## 1994 M1-A1_up_down 24 GO:0005975 0 0 1 1
## 2106 M1-A1_up_down 24 GO:0006091 0 0 1 1
## 2136 M1-A1_up_down 24 GO:0006139 0 0 1 1
## 2236 M1-A1_up_down 24 GO:0006259 0 0 1 1
## 2346 M1-A1_up_down 24 GO:0006412 0 0 1 1
## 2382 M1-A1_up_down 24 GO:0006464 0 0 1 1
## 2525 M1-A1_up_down 24 GO:0006629 0 0 1 1
## 2678 M1-A1_up_down 24 GO:0006810 0 0 1 1
## 2776 M1-A1_up_down 24 GO:0006950 0 0 1 1
## 2849 M1-A1_up_down 24 GO:0007049 0 0 1 1
## 2924 M1-A1_up_down 24 GO:0007154 0 0 1 1
## 2935 M1-A1_up_down 24 GO:0007165 0 0 1 1
## 3009 M1-A1_up_down 24 GO:0007267 0 0 1 1
## 3016 M1-A1_up_down 24 GO:0007275 0 0 1 1
## 3296 M1-A1_up_down 24 GO:0007610 0 0 1 1
## 3354 M1-A1_up_down 24 GO:0008150 5533 2 1 1
## 3355 M1-A1_up_down 24 GO:0008152 0 0 1 1
## 3376 M1-A1_up_down 24 GO:0008219 0 0 1 1
## 3466 M1-A1_up_down 24 GO:0009056 0 0 1 1
## 3468 M1-A1_up_down 24 GO:0009058 0 0 1 1
## 3774 M1-A1_up_down 24 GO:0009605 0 0 1 1
## 3775 M1-A1_up_down 24 GO:0009606 0 0 1 1
## 3776 M1-A1_up_down 24 GO:0009607 0 0 1 1
## 3791 M1-A1_up_down 24 GO:0009628 0 0 1 1
## 3813 M1-A1_up_down 24 GO:0009653 0 0 1 1
## 3859 M1-A1_up_down 24 GO:0009719 0 0 1 1
## 3923 M1-A1_up_down 24 GO:0009790 0 0 1 1
## 3924 M1-A1_up_down 24 GO:0009791 0 0 1 1
## 3963 M1-A1_up_down 24 GO:0009835 0 0 1 1
## 3966 M1-A1_up_down 24 GO:0009838 0 0 1 1
## 3978 M1-A1_up_down 24 GO:0009856 0 0 1 1
## 3992 M1-A1_up_down 24 GO:0009875 0 0 1 1
## 4016 M1-A1_up_down 24 GO:0009908 0 0 1 1
## 4063 M1-A1_up_down 24 GO:0009987 0 0 1 1
## 4067 M1-A1_up_down 24 GO:0009991 0 0 1 1
## 5406 M1-A1_up_down 24 GO:0015979 0 0 1 1
## 5426 M1-A1_up_down 24 GO:0016043 0 0 1 1
## 5431 M1-A1_up_down 24 GO:0016049 0 0 1 1
## 6516 M1-A1_up_down 24 GO:0019538 0 0 1 1
## 6680 M1-A1_up_down 24 GO:0019725 0 0 1 1
## 6695 M1-A1_up_down 24 GO:0019748 0 0 1 1
## 7413 M1-A1_up_down 24 GO:0030154 0 0 1 1
## 11084 M1-A1_up_down 24 GO:0040007 0 0 1 1
## 11105 M1-A1_up_down 24 GO:0040029 0 0 1 1
## 11 M1-A1_up_down 24 no_annot_BP NA 22 NA NA
## 217 M1-A1_up_down 24 GO:0005575 803 0 1 1
## 218 M1-A1_up_down 24 GO:0005576 0 0 1 1
## 254 M1-A1_up_down 24 GO:0005615 0 0 1 1
## 256 M1-A1_up_down 24 GO:0005618 0 0 1 1
## 259 M1-A1_up_down 24 GO:0005622 0 0 1 1
## 260 M1-A1_up_down 24 GO:0005623 0 0 1 1
## 266 M1-A1_up_down 24 GO:0005634 0 0 1 1
## 267 M1-A1_up_down 24 GO:0005635 0 0 1 1
## 276 M1-A1_up_down 24 GO:0005654 0 0 1 1
## 333 M1-A1_up_down 24 GO:0005730 0 0 1 1
## 337 M1-A1_up_down 24 GO:0005737 0 0 1 1
## 338 M1-A1_up_down 24 GO:0005739 0 0 1 1
## 360 M1-A1_up_down 24 GO:0005764 0 0 1 1
## 364 M1-A1_up_down 24 GO:0005768 0 0 1 1
## 368 M1-A1_up_down 24 GO:0005773 0 0 1 1
## 372 M1-A1_up_down 24 GO:0005777 0 0 1 1
## 377 M1-A1_up_down 24 GO:0005783 0 0 1 1
## 387 M1-A1_up_down 24 GO:0005794 0 0 1 1
## 409 M1-A1_up_down 24 GO:0005829 0 0 1 1
## 418 M1-A1_up_down 24 GO:0005840 0 0 1 1
## 430 M1-A1_up_down 24 GO:0005856 0 0 1 1
## 453 M1-A1_up_down 24 GO:0005886 0 0 1 1
## 661 M1-A1_up_down 24 GO:0009536 0 0 1 1
## 686 M1-A1_up_down 24 GO:0009579 0 0 1 1
## 765 M1-A1_up_down 24 GO:0016020 0 0 1 1
## 993 M1-A1_up_down 24 GO:0030312 0 0 1 1
## 1095 M1-A1_up_down 24 GO:0031012 0 0 1 1
## Term Ont
## 31 nucleotide binding MF
## 422 molecular_function MF
## 423 nucleic acid binding MF
## 424 DNA binding MF
## 428 chromatin binding MF
## 439 DNA binding transcription factor activity MF
## 448 RNA binding MF
## 461 motor activity MF
## 469 catalytic activity MF
## 965 nuclease activity MF
## 1416 signaling receptor binding MF
## 1487 structural molecule activity MF
## 1494 transporter activity MF
## 1624 binding MF
## 1636 protein binding MF
## 1718 translation factor activity, RNA binding MF
## 1790 lipid binding MF
## 2974 kinase activity MF
## 3159 transferase activity MF
## 3200 hydrolase activity MF
## 3956 oxygen binding MF
## 4113 enzyme regulator activity MF
## 4115 carbohydrate binding MF
## 5835 signaling receptor activity MF
## 6464 translation regulator activity MF
## 10823 transcription regulator activity MF
## 1 <NA> MF
## 3 reproduction BP
## 1994 carbohydrate metabolic process BP
## 2106 generation of precursor metabolites and energy BP
## 2136 nucleobase-containing compound metabolic process BP
## 2236 DNA metabolic process BP
## 2346 translation BP
## 2382 cellular protein modification process BP
## 2525 lipid metabolic process BP
## 2678 transport BP
## 2776 response to stress BP
## 2849 cell cycle BP
## 2924 cell communication BP
## 2935 signal transduction BP
## 3009 cell-cell signaling BP
## 3016 multicellular organism development BP
## 3296 behavior BP
## 3354 biological_process BP
## 3355 metabolic process BP
## 3376 cell death BP
## 3466 catabolic process BP
## 3468 biosynthetic process BP
## 3774 response to external stimulus BP
## 3775 tropism BP
## 3776 response to biotic stimulus BP
## 3791 response to abiotic stimulus BP
## 3813 anatomical structure morphogenesis BP
## 3859 response to endogenous stimulus BP
## 3923 embryo development BP
## 3924 post-embryonic development BP
## 3963 fruit ripening BP
## 3966 abscission BP
## 3978 pollination BP
## 3992 pollen-pistil interaction BP
## 4016 flower development BP
## 4063 cellular process BP
## 4067 response to extracellular stimulus BP
## 5406 photosynthesis BP
## 5426 cellular component organization BP
## 5431 cell growth BP
## 6516 protein metabolic process BP
## 6680 cellular homeostasis BP
## 6695 secondary metabolic process BP
## 7413 cell differentiation BP
## 11084 growth BP
## 11105 regulation of gene expression, epigenetic BP
## 11 <NA> BP
## 217 cellular_component CC
## 218 extracellular region CC
## 254 extracellular space CC
## 256 cell wall CC
## 259 intracellular CC
## 260 cell CC
## 266 nucleus CC
## 267 nuclear envelope CC
## 276 nucleoplasm CC
## 333 nucleolus CC
## 337 cytoplasm CC
## 338 mitochondrion CC
## 360 lysosome CC
## 364 endosome CC
## 368 vacuole CC
## 372 peroxisome CC
## 377 endoplasmic reticulum CC
## 387 Golgi apparatus CC
## 409 cytosol CC
## 418 ribosome CC
## 430 cytoskeleton CC
## 453 plasma membrane CC
## 661 plastid CC
## 686 thylakoid CC
## 765 membrane CC
## 993 external encapsulating structure CC
## 1095 extracellular matrix CC
## SampleKeys
## 31 NA
## 422 NA
## 423 NA
## 424 NA
## 428 NA
## 439 NA
## 448 NA
## 461 NA
## 469 NA
## 965 NA
## 1416 NA
## 1487 NA
## 1494 NA
## 1624 NA
## 1636 NA
## 1718 NA
## 1790 NA
## 2974 NA
## 3159 NA
## 3200 NA
## 3956 NA
## 4113 NA
## 4115 NA
## 5835 NA
## 6464 NA
## 10823 NA
## 1 AT1G07050, AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G18540, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 3 NA
## 1994 NA
## 2106 NA
## 2136 NA
## 2236 NA
## 2346 NA
## 2382 NA
## 2525 NA
## 2678 NA
## 2776 NA
## 2849 NA
## 2924 NA
## 2935 NA
## 3009 NA
## 3016 NA
## 3296 NA
## 3354 AT4G18540 AT1G07050
## 3355 NA
## 3376 NA
## 3466 NA
## 3468 NA
## 3774 NA
## 3775 NA
## 3776 NA
## 3791 NA
## 3813 NA
## 3859 NA
## 3923 NA
## 3924 NA
## 3963 NA
## 3966 NA
## 3978 NA
## 3992 NA
## 4016 NA
## 4063 NA
## 4067 NA
## 5406 NA
## 5426 NA
## 5431 NA
## 6516 NA
## 6680 NA
## 6695 NA
## 7413 NA
## 11084 NA
## 11105 NA
## 11 AT1G16090, AT1G31690, AT1G33030, AT1G48210, AT1G68050, AT2G17740, AT2G19190, AT2G19450, AT2G21130, AT3G09405, AT3G19260, AT3G21870, AT4G12480, AT4G23550, AT4G33980, AT4G39230, AT5G40760, AT5G42900, AT5G48250, AT5G51790, AT5G60100, ATCG01310
## 217 NA
## 218 NA
## 254 NA
## 256 NA
## 259 NA
## 260 NA
## 266 NA
## 267 NA
## 276 NA
## 333 NA
## 337 NA
## 338 NA
## 360 NA
## 364 NA
## 368 NA
## 372 NA
## 377 NA
## 387 NA
## 409 NA
## 418 NA
## 430 NA
## 453 NA
## 661 NA
## 686 NA
## 765 NA
## 993 NA
## 1095 NA
## [ reached getOption("max.print") -- omitted 2526 rows ]pdf("GOslimbarplotMF.pdf", height=8, width=10); goBarplot(gos, gocat="MF"); dev.off()## png
## 2goBarplot(gos, gocat="BP")
goBarplot(gos, gocat="CC")
Figure 5: GO Slim Barplot for MF Ontology
8 (8)Clustering and heat maps
The following example performs hierarchical clustering on the rlog transformed expression matrix subsetted by the DEGs identified in the above differential expression analysis. It uses a Pearson correlation-based distance measure and complete linkage for cluster joining.
library(pheatmap)
geneids <- unique(as.character(unlist(DEG_list[[1]])))
geneids## [1] "AT1G07050" "AT1G16090" "AT1G31690" "AT1G33030" "AT1G48210" "AT1G68050" "AT2G17740"
## [8] "AT2G19190" "AT2G19450" "AT2G21130" "AT3G09405" "AT3G19260" "AT3G21870" "AT4G12480"
## [15] "AT4G18540" "AT4G23550" "AT4G33980" "AT4G39230" "AT5G40760" "AT5G42900" "AT5G48250"
## [22] "AT5G51790" "AT5G60100" "ATCG01310" "AT1G01060" "AT1G01190" "AT1G01390" "AT1G01420"
## [29] "AT1G01520" "AT1G01600" "AT1G01610" "AT1G01640" "AT1G02710" "AT1G02820" "AT1G02920"
## [36] "AT1G02930" "AT1G03050" "AT1G03055" "AT1G03300" "AT1G03360" "AT1G03905" "AT1G04220"
## [43] "AT1G04250" "AT1G04280" "AT1G04530" "AT1G04550" "AT1G04620" "AT1G04660" "AT1G04770"
## [50] "AT1G04990" "AT1G05020" "AT1G05300" "AT1G05560" "AT1G05562" "AT1G05680" "AT1G05710"
## [57] "AT1G06460" "AT1G07010" "AT1G07040" "AT1G07160" "AT1G07180" "AT1G07420" "AT1G07485"
## [64] "AT1G07490" "AT1G08610" "AT1G08980" "AT1G09180" "AT1G09820" "AT1G09900" "AT1G10040"
## [71] "AT1G10070" "AT1G10200" "AT1G10460" "AT1G10710" "AT1G10960" "AT1G10990" "AT1G11200"
## [78] "AT1G11362" "AT1G11925" "AT1G11950" "AT1G12330" "AT1G12370" "AT1G12710" "AT1G12730"
## [85] "AT1G13030" "AT1G13080" "AT1G13110" "AT1G13270" "AT1G13650" "AT1G13730" "AT1G13800"
## [92] "AT1G13810" "AT1G14150" "AT1G14170" "AT1G14345" "AT1G14540" "AT1G14840" "AT1G14870"
## [99] "AT1G15125" "AT1G15290" "AT1G15510" "AT1G15550" "AT1G15670" "AT1G15870" "AT1G15890"
## [106] "AT1G16350" "AT1G16390" "AT1G16730" "AT1G17050" "AT1G17665" "AT1G18800" "AT1G19130"
## [113] "AT1G19140" "AT1G19150" "AT1G19370" "AT1G19450" "AT1G19700" "AT1G20010" "AT1G20620"
## [120] "AT1G20630" "AT1G20840" "AT1G21100" "AT1G21110" "AT1G21120" "AT1G21130" "AT1G21500"
## [127] "AT1G22180" "AT1G22370" "AT1G22480" "AT1G22490" "AT1G22590" "AT1G22770" "AT1G22850"
## [134] "AT1G23100" "AT1G23410" "AT1G23740" "AT1G24148" "AT1G25320" "AT1G25390" "AT1G25480"
## [141] "AT1G26220" "AT1G26380" "AT1G26390" "AT1G26410" "AT1G26420" "AT1G26665" "AT1G26761"
## [148] "AT1G27020" "AT1G27120" "AT1G27480" "AT1G27630" "AT1G28010" "AT1G28050" "AT1G28330"
## [155] "AT1G29160" "AT1G29600" "AT1G29660" "AT1G30280" "AT1G30282" "AT1G30420" "AT1G30620"
## [162] "AT1G30700" "AT1G30755" "AT1G30960" "AT1G31920" "AT1G31950" "AT1G32440" "AT1G32760"
## [169] "AT1G32900" "AT1G33170" "AT1G33410" "AT1G34380" "AT1G42550" "AT1G42970" "AT1G44000"
## [176] "AT1G44446" "AT1G48100" "AT1G48200" "AT1G48370" "AT1G48480" "AT1G48570" "AT1G48605"
## [183] "AT1G49010" "AT1G49230" "AT1G49430" "AT1G49490" "AT1G49660" "AT1G49720" "AT1G50840"
## [190] "AT1G51080" "AT1G51100" "AT1G51310" "AT1G51610" "AT1G51620" "AT1G51850" "AT1G51890"
## [197] "AT1G51920" "AT1G51940" "AT1G52200" "AT1G52830" "AT1G53035" "AT1G53090" "AT1G53100"
## [204] "AT1G53625" "AT1G54500" "AT1G55260" "AT1G55450" "AT1G55960" "AT1G56140" "AT1G56145"
## [211] "AT1G56150" "AT1G56300" "AT1G56470" "AT1G57630" "AT1G58520" "AT1G59700" "AT1G59950"
## [218] "AT1G60730" "AT1G61300" "AT1G61360" "AT1G61420" "AT1G61550" "AT1G61560" "AT1G62170"
## [225] "AT1G62180" "AT1G62630" "AT1G62720" "AT1G62750" "AT1G62760" "AT1G62960" "AT1G63180"
## [232] "AT1G63250" "AT1G64110" "AT1G64220" "AT1G64500" "AT1G64600" "AT1G64670" "AT1G64680"
## [239] "AT1G64760" "AT1G64770" "AT1G64780" "AT1G64880" "AT1G64900" "AT1G64970" "AT1G65060"
## [246] "AT1G65070" "AT1G65080" "AT1G65490" "AT1G65820" "AT1G65920" "AT1G66130" "AT1G66330"
## [253] "AT1G66540" "AT1G66700" "AT1G66725" "AT1G66780" "AT1G66840" "AT1G67370" "AT1G67590"
## [260] "AT1G67750" "AT1G67970" "AT1G67980" "AT1G68440" "AT1G69200" "AT1G69520" "AT1G70000"
## [267] "AT1G70220" "AT1G70250" "AT1G70580" "AT1G70800" "AT1G71000" "AT1G71400" "AT1G71520"
## [274] "AT1G71850" "AT1G72040" "AT1G72270" "AT1G72330" "AT1G72416" "AT1G72645" "AT1G72770"
## [281] "AT1G73320" "AT1G73600" "AT1G73602" "AT1G73870" "AT1G73890" "AT1G74010" "AT1G74070"
## [288] "AT1G74290" "AT1G74560" "AT1G75100" "AT1G75280" "AT1G75830" "AT1G76240" "AT1G76470"
## [295] "AT1G76790" "AT1G77380" "AT1G77580" "AT1G77810" "AT1G77855" "AT1G78290" "AT1G78370"
## [302] "AT1G78510" "AT1G78930" "AT1G79440" "AT1G79460" "AT1G79680" "AT1G80270" "AT1G80760"
## [309] "AT2G01280" "AT2G01540" "AT2G01890" "AT2G02010" "AT2G02100" "AT2G02150" "AT2G02220"
## [316] "AT2G02230" "AT2G02410" "AT2G02930" "AT2G03550" "AT2G04030" "AT2G04039" "AT2G04790"
## [323] "AT2G05160" "AT2G05630" "AT2G05753" "AT2G11890" "AT2G14170" "AT2G14880" "AT2G15000"
## [330] "AT2G15020" "AT2G15890" "AT2G16365" "AT2G17972" "AT2G18230" "AT2G18330" "AT2G18560"
## [337] "AT2G19670" "AT2G20020" "AT2G20585" "AT2G21185" "AT2G21187" "AT2G21320" "AT2G21330"
## [344] "AT2G21660" "AT2G22240" "AT2G22450" "AT2G22970" "AT2G22980" "AT2G23030" "AT2G23110"
## [351] "AT2G23290" "AT2G23340" "AT2G23430" "AT2G23670" "AT2G23672" "AT2G24120" "AT2G24440"
## [358] "AT2G24540" "AT2G24545" "AT2G24570" "AT2G24580" "AT2G24645" "AT2G24762" "AT2G24820"
## [365] "AT2G25530" "AT2G25680" "AT2G25730" "AT2G25930" "AT2G26080" "AT2G26560" "AT2G26650"
## [372] "AT2G26692" "AT2G27200" "AT2G27420" "AT2G28190" "AT2G28790" "AT2G28930" "AT2G29090"
## [379] "AT2G29720" "AT2G29740" "AT2G30100" "AT2G30150" "AT2G30395" "AT2G30424" "AT2G30520"
## [386] "AT2G30750" "AT2G30760" "AT2G30770" "AT2G31010" "AT2G31380" "AT2G31750" "AT2G31751"
## [393] "AT2G32150" "AT2G32530" "AT2G32540" "AT2G33250" "AT2G33830" "AT2G33855" "AT2G35760"
## [400] "AT2G35950" "AT2G35980" "AT2G36000" "AT2G36390" "AT2G36590" "AT2G36750" "AT2G36800"
## [407] "AT2G36815" "AT2G37240" "AT2G37430" "AT2G37460" "AT2G37630" "AT2G37940" "AT2G37970"
## [414] "AT2G38465" "AT2G38750" "AT2G38760" "AT2G38860" "AT2G39200" "AT2G39380" "AT2G39400"
## [421] "AT2G39518" "AT2G39530" "AT2G39660" "AT2G39710" "AT2G39730" "AT2G39900" "AT2G39920"
## [428] "AT2G40080" "AT2G40110" "AT2G40113" "AT2G40340" "AT2G41050" "AT2G41250" "AT2G41290"
## [435] "AT2G41660" "AT2G42360" "AT2G42710" "AT2G42975" "AT2G43100" "AT2G43590" "AT2G43620"
## [442] "AT2G43650" "AT2G43710" "AT2G43940" "AT2G44080" "AT2G45340" "AT2G46670" "AT2G46790"
## [449] "AT2G46810" "AT2G46830" "AT2G46940" "AT2G47370" "AT2G47390" "AT2G47450" "AT2G47485"
## [456] "AT2G47630" "AT3G01060" "AT3G01140" "AT3G01142" "AT3G01180" "AT3G01440" "AT3G02800"
## [463] "AT3G02830" "AT3G04140" "AT3G04420" "AT3G04950" "AT3G05390" "AT3G06145" "AT3G06520"
## [470] "AT3G06750" "AT3G06920" "AT3G07310" "AT3G07640" "AT3G07650" "AT3G07750" "AT3G07770"
## [477] "AT3G09160" "AT3G09162" "AT3G09190" "AT3G09390" "AT3G09600" "AT3G09650" "AT3G10040"
## [484] "AT3G10110" "AT3G10410" "AT3G10525" "AT3G11020" "AT3G11090" "AT3G11110" "AT3G11230"
## [491] "AT3G12030" "AT3G12220" "AT3G12230" "AT3G12320" "AT3G13450" "AT3G13470" "AT3G13700"
## [498] "AT3G13710" "AT3G14360" "AT3G14810" "AT3G14900" "AT3G15354" "AT3G15356" "AT3G15518"
## [505] "AT3G15540" "AT3G15620" "AT3G15850" "AT3G15990" "AT3G16180" "AT3G16360" "AT3G16520"
## [512] "AT3G16530" "AT3G16565" "AT3G17160" "AT3G17170" "AT3G17640" "AT3G17840" "AT3G18080"
## [519] "AT3G18750" "AT3G19000" "AT3G19210" "AT3G19440" "AT3G19450" "AT3G19480" "AT3G19615"
## [526] "AT3G20410" "AT3G21240" "AT3G21390" "AT3G21460" "AT3G21470" "AT3G21890" "AT3G22120"
## [533] "AT3G22121" "AT3G22150" "AT3G22235" "AT3G22460" "AT3G23090" "AT3G23210" "AT3G23280"
## [540] "AT3G23510" "AT3G23930" "AT3G23940" "AT3G24170" "AT3G24190" "AT3G24460" "AT3G25030"
## [547] "AT3G25670" "AT3G26500" "AT3G26570" "AT3G26670" "AT3G26680" "AT3G26740" "AT3G26830"
## [554] "AT3G27210" "AT3G27300" "AT3G27350" "AT3G27415" "AT3G27416" "AT3G28040" "AT3G28370"
## [561] "AT3G28540" "AT3G30460" "AT3G30720" "AT3G43670" "AT3G43790" "AT3G43960" "AT3G44020"
## [568] "AT3G44300" "AT3G44730" "AT3G45060" "AT3G45390" "AT3G46090" "AT3G46440" "AT3G46640"
## [575] "AT3G46690" "AT3G46900" "AT3G47070" "AT3G47360" "AT3G47420" "AT3G47430" "AT3G47800"
## [582] "AT3G47860" "AT3G48280" "AT3G48490" "AT3G48560" "AT3G48660" "AT3G48690" "AT3G49110"
## [589] "AT3G49120" "AT3G49130" "AT3G49240" "AT3G49470" "AT3G49570" "AT3G50120" "AT3G50210"
## [596] "AT3G50480" "AT3G50500" "AT3G50685" "AT3G50810" "AT3G51330" "AT3G51420" "AT3G51750"
## [603] "AT3G51895" "AT3G52450" "AT3G52720" "AT3G52920" "AT3G53700" "AT3G53830" "AT3G53920"
## [610] "AT3G54150" "AT3G54220" "AT3G54390" "AT3G54490" "AT3G54500" "AT3G54720" "AT3G54900"
## [617] "AT3G55150" "AT3G55450" "AT3G56080" "AT3G56160" "AT3G56290" "AT3G56300" "AT3G56330"
## [624] "AT3G56500" "AT3G56570" "AT3G57020" "AT3G57040" "AT3G57180" "AT3G57190" "AT3G57400"
## [631] "AT3G57550" "AT3G57700" "AT3G58570" "AT3G58840" "AT3G58990" "AT3G59220" "AT3G59250"
## [638] "AT3G59330" "AT3G59350" "AT3G59400" "AT3G59700" "AT3G59900" "AT3G61160" "AT3G61220"
## [645] "AT3G61780" "AT3G61880" "AT3G62150" "AT3G63160" "AT3G63200" "AT3G63380" "AT3G63530"
## [652] "AT4G00050" "AT4G00165" "AT4G00360" "AT4G01037" "AT4G01070" "AT4G01080" "AT4G01130"
## [659] "AT4G01250" "AT4G01535" "AT4G01750" "AT4G02380" "AT4G02520" "AT4G02630" "AT4G02990"
## [666] "AT4G03460" "AT4G03600" "AT4G04020" "AT4G04330" "AT4G04610" "AT4G05110" "AT4G09020"
## [673] "AT4G09350" "AT4G09650" "AT4G10120" "AT4G10600" "AT4G10620" "AT4G11100" "AT4G11175"
## [680] "AT4G11470" "AT4G11521" "AT4G11600" "AT4G12390" "AT4G12470" "AT4G12830" "AT4G12880"
## [687] "AT4G12980" "AT4G13800" "AT4G14270" "AT4G14440" "AT4G14690" "AT4G15210" "AT4G15233"
## [694] "AT4G15248" "AT4G15430" "AT4G15480" "AT4G15550" "AT4G15810" "AT4G16140" "AT4G16146"
## [701] "AT4G16400" "AT4G16410" "AT4G16690" "AT4G16820" "AT4G16980" "AT4G17140" "AT4G17180"
## [708] "AT4G17680" "AT4G17880" "AT4G17970" "AT4G18430" "AT4G18800" "AT4G19120" "AT4G19170"
## [715] "AT4G19390" "AT4G19410" "AT4G19810" "AT4G19880" "AT4G20000" "AT4G20090" "AT4G20360"
## [722] "AT4G21880" "AT4G21990" "AT4G22710" "AT4G22770" "AT4G23280" "AT4G23680" "AT4G23770"
## [729] "AT4G23810" "AT4G24540" "AT4G24670" "AT4G24700" "AT4G25290" "AT4G25780" "AT4G25810"
## [736] "AT4G25900" "AT4G26270" "AT4G26600" "AT4G26670" "AT4G26800" "AT4G26850" "AT4G27030"
## [743] "AT4G27130" "AT4G27700" "AT4G27950" "AT4G27970" "AT4G28150" "AT4G28550" "AT4G28660"
## [750] "AT4G28700" "AT4G28730" "AT4G28740" "AT4G28780" "AT4G29600" "AT4G30470" "AT4G30610"
## [757] "AT4G30690" "AT4G30960" "AT4G31050" "AT4G31210" "AT4G31390" "AT4G31550" "AT4G31620"
## [764] "AT4G31870" "AT4G32340" "AT4G32770" "AT4G33010" "AT4G33160" "AT4G33560" "AT4G33985"
## [771] "AT4G34550" "AT4G34580" "AT4G34610" "AT4G34630" "AT4G34770" "AT4G34900" "AT4G34950"
## [778] "AT4G34990" "AT4G35090" "AT4G35180" "AT4G35380" "AT4G36580" "AT4G36760" "AT4G36770"
## [785] "AT4G36950" "AT4G37030" "AT4G37390" "AT4G37409" "AT4G37410" "AT4G37650" "AT4G37800"
## [792] "AT4G37925" "AT4G38000" "AT4G38060" "AT4G38410" "AT4G38540" "AT4G38545" "AT4G38680"
## [799] "AT4G38960" "AT4G38970" "AT4G39270" "AT4G39330" "AT4G39470" "AT4G39510" "AT4G39800"
## [806] "AT4G40070" "AT5G01015" "AT5G01075" "AT5G01260" "AT5G01410" "AT5G01820" "AT5G02050"
## [813] "AT5G02160" "AT5G02180" "AT5G02230" "AT5G02260" "AT5G02540" "AT5G02780" "AT5G02830"
## [820] "AT5G02950" "AT5G03460" "AT5G03555" "AT5G03760" "AT5G05190" "AT5G05270" "AT5G05410"
## [827] "AT5G05580" "AT5G06550" "AT5G06690" "AT5G06790" "AT5G08380" "AT5G08490" "AT5G08610"
## [834] "AT5G08720" "AT5G08760" "AT5G09500" "AT5G09760" "AT5G09840" "AT5G10150" "AT5G10470"
## [841] "AT5G10520" "AT5G10820" "AT5G10860" "AT5G11150" "AT5G11210" "AT5G11670" "AT5G12080"
## [848] "AT5G12110" "AT5G12880" "AT5G12930" "AT5G13400" "AT5G13730" "AT5G13770" "AT5G13920"
## [855] "AT5G14350" "AT5G14560" "AT5G14580" "AT5G14610" "AT5G14740" "AT5G15030" "AT5G15600"
## [862] "AT5G15640" "AT5G15840" "AT5G15845" "AT5G15850" "AT5G15948" "AT5G15950" "AT5G16340"
## [869] "AT5G16380" "AT5G16530" "AT5G17050" "AT5G17170" "AT5G17300" "AT5G18470" "AT5G18525"
## [876] "AT5G18540" "AT5G18570" "AT5G18670" "AT5G18690" "AT5G19300" "AT5G19730" "AT5G19850"
## [883] "AT5G19970" "AT5G20070" "AT5G20220" "AT5G20225" "AT5G20380" "AT5G20950" "AT5G21100"
## [890] "AT5G22390" "AT5G22640" "AT5G23070" "AT5G23235" "AT5G23240" "AT5G23575" "AT5G23660"
## [897] "AT5G23730" "AT5G23750" "AT5G23760" "AT5G24030" "AT5G24105" "AT5G24110" "AT5G24120"
## [904] "AT5G24150" "AT5G24165" "AT5G24240" "AT5G24280" "AT5G24380" "AT5G24470" "AT5G24580"
## [911] "AT5G24660" "AT5G24850" "AT5G25120" "AT5G25130" "AT5G25140" "AT5G25340" "AT5G25590"
## [918] "AT5G25630" "AT5G26260" "AT5G26340" "AT5G26570" "AT5G27760" "AT5G28450" "AT5G28500"
## [925] "AT5G33290" "AT5G34780" "AT5G37740" "AT5G38420" "AT5G38430" "AT5G38895" "AT5G39410"
## [932] "AT5G39580" "AT5G39710" "AT5G40240" "AT5G41260" "AT5G43400" "AT5G43630" "AT5G43850"
## [939] "AT5G44010" "AT5G44190" "AT5G44380" "AT5G44480" "AT5G44490" "AT5G44910" "AT5G45800"
## [946] "AT5G46050" "AT5G46220" "AT5G46580" "AT5G46600" "AT5G46860" "AT5G46871" "AT5G47220"
## [953] "AT5G47360" "AT5G47560" "AT5G48030" "AT5G48180" "AT5G48430" "AT5G48850" "AT5G48910"
## [960] "AT5G49015" "AT5G49100" "AT5G49740" "AT5G49900" "AT5G50100" "AT5G50200" "AT5G51540"
## [967] "AT5G51570" "AT5G51720" "AT5G52570" "AT5G53110" "AT5G53170" "AT5G53200" "AT5G53970"
## [974] "AT5G54130" "AT5G54190" "AT5G54470" "AT5G54585" "AT5G54610" "AT5G54630" "AT5G54930"
## [981] "AT5G54960" "AT5G55050" "AT5G55090" "AT5G55530" "AT5G55570" "AT5G55730" "AT5G55740"
## [988] "AT5G55790" "AT5G56580" "AT5G56850" "AT5G56860" "AT5G56960" "AT5G57030" "AT5G57110"
## [995] "AT5G57180" "AT5G57220" "AT5G57240" "AT5G57630" "AT5G57640" "AT5G58600"
## [ reached getOption("max.print") -- omitted 4955 entries ]y <- assay(rlog(dds))[geneids, ]
y## M1A M1B A1A A1B V1A V1B M6A M6B
## AT1G07050 6.5949061 6.2013193 7.3559949 7.9863726 9.3102735 8.6288582 9.4343019 10.2050020
## AT1G16090 6.6187225 6.6558008 7.6499004 7.8402974 7.8485860 7.9338764 6.7266357 6.7711902
## AT1G31690 7.7881456 6.9417258 8.2740868 8.6591630 8.6178441 8.7704644 9.1913588 9.7062975
## AT1G33030 5.3158348 5.8856913 6.5221116 7.2050963 7.3419420 6.5032958 5.9504663 6.3251775
## AT1G48210 9.5105375 9.0227791 10.2397476 10.0284520 10.4925990 10.5462106 11.1219260 11.0830843
## AT1G68050 7.8243769 6.8405511 9.0950398 8.3619481 10.6953466 10.3115556 10.0528792 10.3571747
## AT2G17740 6.7903044 7.8023009 8.7208836 10.0490916 10.0669639 9.3299128 7.3769006 8.4205837
## AT2G19190 8.5763232 9.1784513 9.9968481 11.2335047 11.1341169 10.7746675 8.1566146 9.1290943
## AT2G19450 8.5854037 8.8179795 9.5211762 9.5428854 10.0946789 10.3511804 9.6672751 9.7241534
## AT2G21130 7.8717607 7.9103631 8.6365775 8.7002251 9.1575475 8.7965633 9.5827537 9.8752303
## AT3G09405 7.4771240 7.8706630 8.6264031 9.2954315 9.2122122 9.4142377 7.6256819 8.4853270
## AT3G19260 8.9294029 8.6830289 9.7985859 9.6627844 10.3836178 10.3600549 8.2040134 8.3241750
## AT3G21870 5.0266398 5.4873313 4.1822890 3.8245552 4.5513127 4.6369629 5.4804472 6.1474682
## AT4G12480 8.5773340 8.4950955 9.1200804 9.4986911 9.9545207 9.5311200 10.6679505 11.2023157
## AT4G18540 3.2595498 2.5280722 5.2912124 4.4013143 4.4212868 5.6859919 2.6455171 3.0903014
## AT4G23550 7.7775481 7.6960694 9.1210779 9.0375174 9.8982034 9.1545067 6.0488803 6.4457553
## AT4G33980 6.3093244 6.2348157 7.0999485 6.6841940 9.3194099 8.2697814 9.5250089 10.4108522
## AT4G39230 8.6571332 8.8559768 9.4363877 9.7187334 9.8500987 9.8724494 7.8495386 7.9285040
## AT5G40760 10.8204796 11.1025109 11.9361582 11.8877016 11.9798514 11.7521655 11.0739502 11.3404730
## AT5G42900 7.8767813 7.6701618 8.7132348 8.0037809 10.5682641 10.2160240 10.9650081 10.8362155
## AT5G48250 8.0728811 7.7641935 8.8042909 8.4824331 10.1705811 10.3139631 10.1975790 10.0372653
## AT5G51790 3.4901500 3.2717128 3.9156570 4.6520370 4.0817534 4.0729605 4.5256151 5.1118182
## AT5G60100 6.6547146 6.7274355 7.3690509 7.9250179 8.6828700 8.8781531 9.5660847 9.8278233
## ATCG01310 5.7339714 9.1349668 5.8199005 5.7746361 5.9449447 5.7899188 7.8921303 8.2132333
## AT1G01060 7.8079886 8.8751237 7.3553667 7.4078510 6.5427098 6.3380247 5.4542873 5.2655176
## AT1G01190 6.4357153 6.0475390 5.0117645 5.7287391 4.8169374 5.6417558 5.6989826 6.3767859
## AT1G01390 5.7587901 6.4842508 5.6700118 6.6623698 5.2425308 5.3759840 6.1023400 6.1207929
## AT1G01420 8.2938047 8.6399420 8.0178190 8.2343427 7.7671170 7.9109000 8.2888335 7.9361795
## AT1G01520 1.9161179 4.4181599 1.7445132 3.7860416 2.1036553 2.0187771 1.4600987 1.8836037
## AT1G01600 5.5530055 6.7564558 5.7661913 5.8710045 5.5655786 5.1990640 5.8242666 5.1906962
## AT1G01610 11.3056402 12.0164218 11.3928217 11.6189512 11.2472697 10.8191263 11.2527681 10.8204461
## AT1G01640 5.6453674 5.3997424 5.6984040 5.3589656 6.1741472 5.9887194 5.9071893 5.9595254
## AT1G02710 4.1549727 4.7832139 4.2832560 4.9199820 3.5220395 3.6312042 4.4891414 4.4590459
## AT1G02820 6.0718255 10.1364859 4.9578149 7.4817411 4.7404832 5.0121136 3.5648430 3.9356797
## AT1G02920 12.1227792 12.0305596 13.1524013 13.1701768 13.6583962 13.7454316 11.0908131 12.0683505
## AT1G02930 14.1451579 13.7093378 14.8635961 14.4224224 15.1150572 15.2585254 12.8617166 13.3821636
## AT1G03050 3.1596705 3.4191525 2.4984806 2.1840161 2.5250015 2.1405330 2.0819165 2.6349261
## AT1G03055 6.5954876 6.1966955 5.7302860 5.2859296 5.1540689 5.0455561 5.1911120 5.4282669
## AT1G03300 4.5968786 4.9989314 4.0771380 5.1308409 4.1857083 4.2239549 5.9285307 5.8063556
## AT1G03360 7.6149500 7.4462009 7.4064812 7.3312572 7.0090514 6.6530344 7.9119327 7.9490445
## AT1G03905 6.8410838 7.0708529 7.6952850 7.5638375 8.0369580 7.3837428 5.8511056 6.0844452
## AT1G04220 8.7456187 9.8327007 8.0104639 8.7472295 8.0715459 7.9112489 7.6341670 6.8415848
## AT1G04250 8.3478871 8.2380309 7.4291648 8.2279375 7.0016251 7.3540835 7.9387933 7.9948205
## AT1G04280 7.7152470 7.4086040 8.0140868 7.7807955 8.3156447 8.2467922 8.4727900 8.5882516
## AT1G04530 11.5348042 11.3401096 11.1256266 11.1663935 10.8772221 10.6483658 10.4690167 10.3702914
## AT1G04550 7.2666235 7.8326310 7.0305968 7.4380540 6.9430596 6.8102887 7.9595187 7.9642721
## AT1G04620 8.3596289 8.3144636 8.2083587 8.3625290 8.9177258 9.0268082 10.1321210 10.0440013
## AT1G04660 2.4875427 3.7126427 2.3203834 3.9685833 2.3401864 2.1296281 2.6335031 3.5564262
## AT1G04770 9.0527598 10.3971641 9.1205642 10.0769744 8.8044556 7.5689438 8.1546065 10.1483908
## AT1G04990 8.8553118 8.9817431 9.5210692 9.3665866 9.8018867 10.0365145 9.6830045 9.7365585
## AT1G05020 7.0905129 6.5649736 7.4705370 7.2338242 7.2562489 8.0759702 5.0739298 5.2617699
## AT1G05300 8.3699436 8.5842874 9.0072162 9.6321568 9.6669641 9.2398022 7.9043723 8.3129258
## AT1G05560 9.8753003 11.3112332 9.4530511 11.0097573 10.0129501 9.7814214 11.3287987 11.3009003
## AT1G05562 9.5909730 10.9900870 9.2055637 10.7231384 9.6554132 9.5806151 11.0270101 10.9948375
## AT1G05680 7.2922411 7.7578469 6.6688911 6.6622132 7.1278022 6.6400900 8.1483617 8.2451397
## A6A A6B V6A V6B M12A M12B A12A A12B
## AT1G07050 8.4839478 8.9888174 8.5665834 8.8049781 8.4514331 8.6874967 7.904630 8.1783973
## AT1G16090 7.6197159 6.9684764 7.1970281 6.8155053 7.2709324 7.5738858 7.127786 6.9125780
## AT1G31690 9.1077684 9.1695997 8.2842026 7.6278792 8.3017505 7.8575435 7.550886 7.6564078
## AT1G33030 7.6835798 7.3784001 6.9160823 6.2338866 5.9999200 5.6525599 6.929067 6.9380382
## AT1G48210 11.6415639 11.3386047 11.3798791 10.5999558 11.0118259 10.6277888 11.536365 11.3861539
## AT1G68050 9.5322293 9.2077830 9.0452374 8.7178079 8.7989702 8.7692985 8.892862 8.5146462
## AT2G17740 8.0612653 7.9622978 8.3172928 7.4325659 7.2732465 7.4066665 6.282449 6.6063960
## AT2G19190 10.1830393 9.6030841 9.8316958 8.2514165 8.3846495 7.7639336 9.042590 8.6864564
## AT2G19450 9.8256250 9.8481590 9.3474686 9.7699736 9.3215832 9.3256986 9.303529 9.5329587
## AT2G21130 8.8473047 9.1679138 8.4001622 8.8202985 7.5555450 7.6939627 7.608488 7.4867005
## AT3G09405 9.2256208 9.1308034 8.6535791 8.0921916 8.0667519 7.1811162 8.027954 8.2217559
## AT3G19260 8.8566503 8.7752427 8.4164129 7.8535408 8.5144407 7.9890312 8.460396 8.4876298
## AT3G21870 4.1164302 5.2814120 4.6629992 5.4931000 6.6069066 7.0328786 5.966383 6.2521736
## AT4G12480 10.9900728 11.7625516 11.9506179 11.6158406 11.4226116 11.2183629 10.237756 10.7097696
## AT4G18540 2.7994038 2.8750635 3.3219468 2.6234871 2.3328110 2.4819979 2.403774 2.2457318
## AT4G23550 6.5033048 6.4693680 6.9328396 6.2537846 5.7243271 5.5878667 5.629732 6.4482062
## AT4G33980 8.7337924 9.1953336 8.4817244 8.8074892 8.2556291 8.9480009 8.482171 8.7377544
## AT4G39230 7.9130648 8.0683390 8.1031377 7.7754045 7.5662533 7.4652732 7.575215 7.6398198
## AT5G40760 11.6920845 11.7718514 11.7643291 11.5332124 11.0558402 10.7049633 11.246520 11.3353611
## AT5G42900 10.2546871 10.8295228 10.5714974 11.0362622 9.7985450 10.1062611 9.439385 10.2047101
## AT5G48250 9.5051883 9.6170144 9.5770758 9.5730032 9.6383350 9.9234331 9.646073 9.4859091
## AT5G51790 4.3639501 4.7035235 4.6843874 4.4588212 4.7675024 4.9725753 4.732850 4.4582314
## AT5G60100 9.0280372 9.0664111 8.8125910 8.6709485 8.6473715 8.3374292 7.987244 7.8599756
## ATCG01310 7.6447720 8.1804038 7.8487136 7.9106491 8.2666708 8.3532682 5.708186 8.2701596
## AT1G01060 5.3032371 5.1353807 4.9113155 5.3213776 8.4536951 8.3294214 8.843905 8.3874947
## AT1G01190 4.9026156 5.8798517 5.0702225 5.3018594 5.3630894 6.4220387 4.653389 5.3612668
## AT1G01390 4.9861285 4.9627946 4.8497052 4.8013103 6.0915333 6.2986996 5.710289 5.5320464
## AT1G01420 7.9871965 7.7393346 8.1748867 7.7433940 8.5146106 8.2216198 8.330832 7.9999913
## AT1G01520 1.4456198 1.6532651 1.3666841 1.3787538 1.6178681 1.6652448 2.924287 1.7516016
## AT1G01600 5.3817852 4.9961746 5.5770792 5.6090849 5.0899952 4.8645645 5.660113 4.7174893
## AT1G01610 10.3521707 10.6360586 10.8730567 11.1573986 11.3300117 10.8838756 10.341364 10.0253698
## AT1G01640 6.5484258 6.3189110 6.7005098 6.4381227 6.6141179 6.6533295 6.789498 7.1131504
## AT1G02710 4.2111244 4.7055246 3.9642359 4.4301967 5.8819955 5.4025877 4.250257 4.7891565
## AT1G02820 3.1809817 3.0163166 3.2938956 3.2607172 3.1270688 4.0389987 3.314913 3.1696570
## AT1G02920 13.0213171 12.7964475 12.3702803 11.3150939 11.3413223 11.0070711 11.481657 11.7348500
## AT1G02930 13.9475137 13.9631873 13.6018722 12.6802704 12.5709497 12.2337563 12.677039 12.6733054
## AT1G03050 4.5796798 3.0973652 2.6674404 2.4064025 2.6374567 2.5902199 4.826973 3.7683635
## AT1G03055 6.0668202 5.1075517 5.0628427 4.5444767 4.9513410 5.3982449 5.504305 5.8723214
## AT1G03300 5.2666472 5.2857908 5.3496863 5.6250430 5.8834118 6.3287301 5.276588 5.5137112
## AT1G03360 8.2352794 7.6409041 7.8843450 7.8741901 7.2280774 7.3387505 7.319381 7.0879303
## AT1G03905 5.9649890 6.1793938 5.9864964 5.8769070 5.3871130 5.6806372 5.990093 5.7566537
## AT1G04220 6.8108487 7.2944413 7.5008170 7.4753352 7.5616383 6.5745626 7.355070 6.0100678
## AT1G04250 7.6199176 7.3614343 7.2216604 7.4184785 7.7796558 7.8897244 8.062284 7.4715954
## AT1G04280 9.1355169 9.1962598 8.9708880 8.6819690 8.7346135 8.9881197 9.053905 9.5659937
## AT1G04530 10.5885903 10.5957585 10.5285111 9.9952176 10.2089088 10.2906629 10.695991 10.6827865
## AT1G04550 7.8063531 7.8098056 7.9485947 7.9725123 8.1096753 8.6554706 8.179874 8.0805406
## AT1G04620 9.8525552 9.8324058 9.6784680 9.9573745 10.1624948 10.3112755 9.590868 9.7136840
## AT1G04660 3.0115270 3.9379284 2.4374951 3.1280282 2.8655249 2.9529428 2.338213 3.1535202
## AT1G04770 8.3696797 8.0422248 8.7172368 8.2247418 8.5842575 8.6937694 8.538695 8.1145523
## AT1G04990 10.3464933 10.0346164 9.6566604 9.4932462 9.8280410 9.2652070 10.338067 9.9653914
## AT1G05020 5.9331423 5.7849693 4.7371631 4.7731094 5.1331781 4.9301358 5.588933 5.3176175
## AT1G05300 7.8590737 7.9269962 7.6780996 7.6832189 7.8295526 7.9929612 7.467650 7.8812109
## AT1G05560 11.3587099 11.7467862 10.7780261 11.5109208 10.8373853 11.3702340 11.067263 11.4836534
## AT1G05562 11.0882930 11.4229399 10.5566485 11.2162272 10.6258835 11.0913066 10.801922 11.1495216
## AT1G05680 8.3386612 8.8734433 7.6932406 8.2197636 7.1186043 7.8181068 8.347287 9.3207207
## V12A V12B
## AT1G07050 7.810398 8.3461855
## AT1G16090 7.144078 6.8458164
## AT1G31690 7.770929 7.6403494
## AT1G33030 6.336950 5.7051858
## AT1G48210 11.411304 10.8747775
## AT1G68050 8.740185 8.9338336
## AT2G17740 6.223463 6.1755182
## AT2G19190 8.187751 7.4965599
## AT2G19450 9.470513 9.4633727
## AT2G21130 7.687889 7.7709306
## AT3G09405 8.322151 7.5960954
## AT3G19260 8.187797 7.7859236
## AT3G21870 6.245226 6.4167937
## AT4G12480 10.312572 10.3816208
## AT4G18540 2.319661 2.1511948
## AT4G23550 5.699881 5.6898540
## AT4G33980 8.279692 9.0234950
## AT4G39230 7.601511 7.4444572
## AT5G40760 11.413653 11.1977293
## AT5G42900 10.618270 11.3188554
## AT5G48250 9.487510 9.5985382
## AT5G51790 4.459525 4.0815779
## AT5G60100 7.850741 7.8470382
## ATCG01310 8.687641 7.6649804
## AT1G01060 8.176933 8.0713182
## AT1G01190 4.964850 5.1697381
## AT1G01390 5.915392 5.4423688
## AT1G01420 8.399950 8.0155952
## AT1G01520 2.616834 3.0458932
## AT1G01600 5.886424 5.4434713
## AT1G01610 11.483200 11.1708913
## AT1G01640 6.740894 6.7253192
## AT1G02710 5.097165 4.6778423
## AT1G02820 4.084531 3.7019159
## AT1G02920 10.938561 10.4931922
## AT1G02930 12.181758 11.7198167
## AT1G03050 4.207918 2.6257474
## AT1G03055 5.293173 4.9480661
## AT1G03300 5.194882 4.8443738
## AT1G03360 7.296197 7.7132606
## AT1G03905 6.048841 5.7230006
## AT1G04220 8.190014 7.3840238
## AT1G04250 8.008249 7.8856581
## AT1G04280 9.004969 8.8055710
## AT1G04530 10.465829 10.9804281
## AT1G04550 7.996406 8.4558423
## AT1G04620 9.788649 9.9801291
## AT1G04660 2.223338 3.0518597
## AT1G04770 8.187368 7.8772866
## AT1G04990 9.767589 9.1963910
## AT1G05020 5.367333 4.6302427
## AT1G05300 7.675512 7.2885099
## AT1G05560 11.042912 11.1892146
## AT1G05562 10.826222 10.8811751
## AT1G05680 9.100294 9.6876731
## [ reached getOption("max.print") -- omitted 5900 rows ]pdf("heatmap1.pdf")
pheatmap(y, scale="row", clustering_distance_rows="correlation", clustering_distance_cols="correlation")
dev.off()## pdf
## 3#knitr::knit_exit()
Figure 6: Heat Map with Hierarchical Clustering Dendrograms of DEGs
9 (9)clusterProfiler Integration
system("echo HOSTNAME HOSTNAME HOSTNAME HOSTNAME HOSTNAME HOSTNAME HOSTNAME")
system("hostname") # should return name of a compute node starting with i or c
system("date")
system("echo ==============================================================")
library(org.Hs.eg.db) # Homo sapiens## keytypes(org.Hs.eg.db)## [1] "ACCNUM" "ALIAS" "ENSEMBL" "ENSEMBLPROT" "ENSEMBLTRANS" "ENTREZID"
## [7] "ENZYME" "EVIDENCE" "EVIDENCEALL" "GENENAME" "GO" "GOALL"
## [13] "IPI" "MAP" "OMIM" "ONTOLOGY" "ONTOLOGYALL" "PATH"
## [19] "PFAM" "PMID" "PROSITE" "REFSEQ" "SYMBOL" "UCSCKG"
## [25] "UNIGENE" "UNIPROT"x <- c("GPX3", "GLRX", "LBP", "CRYAB", "DEFB1", "HCLS1", "SOD2", "HSPA2",
"ORM1", "IGFBP1", "PTHLH", "GPC3", "IGFBP3","TOB1", "MITF", "NDRG1",
"NR1H4", "FGFR3", "PVR", "IL6", "PTPRM", "ERBB2", "NID2", "LAMB1",
"COMP", "PLS3", "MCAM", "SPP1", "LAMC1", "COL4A2", "COL4A1", "MYOC",
"ANXA4", "TFPI2", "CST6", "SLPI", "TIMP2", "CPM", "GGT1", "NNMT",
"MAL", "EEF1A2", "HGD", "TCN2", "CDA", "PCCA", "CRYM", "PDXK",
"STC1", "WARS", "HMOX1", "FXYD2", "RBP4", "SLC6A12", "KDELR3", "ITM2B")
eg = bitr(x, fromType="SYMBOL", toType="ENTREZID", OrgDb="org.Hs.eg.db")## 'select()' returned 1:1 mapping between keys and columnshead(eg)## SYMBOL ENTREZID
## 1 GPX3 2878
## 2 GLRX 2745
## 3 LBP 3929
## 4 CRYAB 1410
## 5 DEFB1 1672
## 6 HCLS1 3059eg## SYMBOL ENTREZID
## 1 GPX3 2878
## 2 GLRX 2745
## 3 LBP 3929
## 4 CRYAB 1410
## 5 DEFB1 1672
## 6 HCLS1 3059
## 7 SOD2 6648
## 8 HSPA2 3306
## 9 ORM1 5004
## 10 IGFBP1 3484
## 11 PTHLH 5744
## 12 GPC3 2719
## 13 IGFBP3 3486
## 14 TOB1 10140
## 15 MITF 4286
## 16 NDRG1 10397
## 17 NR1H4 9971
## 18 FGFR3 2261
## 19 PVR 5817
## 20 IL6 3569
## 21 PTPRM 5797
## 22 ERBB2 2064
## 23 NID2 22795
## 24 LAMB1 3912
## 25 COMP 1311
## 26 PLS3 5358
## 27 MCAM 4162
## 28 SPP1 6696
## 29 LAMC1 3915
## 30 COL4A2 1284
## 31 COL4A1 1282
## 32 MYOC 4653
## 33 ANXA4 307
## 34 TFPI2 7980
## 35 CST6 1474
## 36 SLPI 6590
## 37 TIMP2 7077
## 38 CPM 1368
## 39 GGT1 2678
## 40 NNMT 4837
## 41 MAL 4118
## 42 EEF1A2 1917
## 43 HGD 3081
## 44 TCN2 6948
## 45 CDA 978
## 46 PCCA 5095
## 47 CRYM 1428
## 48 PDXK 8566
## 49 STC1 6781
## 50 WARS 7453
## 51 HMOX1 3162
## 52 FXYD2 486
## 53 RBP4 5950
## 54 SLC6A12 6539
## 55 KDELR3 11015
## 56 ITM2B 9445library(org.At.tair.db) # Arabidopsis thaliana## keytypes(org.At.tair.db)## [1] "ARACYC" "ARACYCENZYME" "ENTREZID" "ENZYME" "EVIDENCE" "EVIDENCEALL"
## [7] "GENENAME" "GO" "GOALL" "ONTOLOGY" "ONTOLOGYALL" "PATH"
## [13] "PMID" "REFSEQ" "SYMBOL" "TAIR"load(file="descv.RData")
length(names(descv)) # descv is from line 521 ## [1] 28279de = names(descv)[1:100]
de = names(descv)
str(de)## chr [1:28279] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" "AT3G18710" "AT4G25880" ...length(de)## [1] 28279head(de)## [1] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" "AT3G18710" "AT4G25880"# eg = bitr(de, fromType="TAIR", toType=c("ENTREZID","SYMBOL","GO"), OrgDb="org.At.tair.db", drop = FALSE)
eg = bitr(de, fromType="TAIR", toType=c("GOALL"), OrgDb="org.At.tair.db", drop = FALSE)## 'select()' returned 1:many mapping between keys and columns## Warning in bitr(de, fromType = "TAIR", toType = c("GOALL"), OrgDb = "org.At.tair.db", : 6.36% of
## input gene IDs are fail to map...str(eg)## 'data.frame': 1329517 obs. of 4 variables:
## $ TAIR : chr "AT5G16970" "AT5G16970" "AT5G16970" "AT5G16970" ...
## $ GOALL : chr "GO:0003674" "GO:0003824" "GO:0005575" "GO:0005575" ...
## $ EVIDENCEALL: chr "IDA" "IDA" "IDA" "ISM" ...
## $ ONTOLOGYALL: chr "MF" "MF" "CC" "CC" ...head(eg)## TAIR GOALL EVIDENCEALL ONTOLOGYALL
## 1 AT5G16970 GO:0003674 IDA MF
## 2 AT5G16970 GO:0003824 IDA MF
## 3 AT5G16970 GO:0005575 IDA CC
## 4 AT5G16970 GO:0005575 ISM CC
## 5 AT5G16970 GO:0005622 IDA CC
## 6 AT5G16970 GO:0005622 ISM CC# nrow(eg)
# eg[1:10]# takes time 5:00
# still need to work on two formula interfaces
displayKnitStatus()
## Not run:
data(gcSample)
str(gcSample)
# head(gcSample)
xx <- compareCluster(gcSample, fun="enrichKEGG", organism="hsa", pvalueCutoff=0.05)
str(xx) # 58 obs. of 10 variables
# as.data.frame(xx)
# graphics::plot(xx, type="dot", caption="KEGG Enrichment Comparison")
## formula interface
mydf <- data.frame(Entrez=c('1', '100', '1000', '100101467', '100127206', '100128071'),
group = c('A', 'A', 'A', 'B', 'B', 'B'),
othergroup = c('good', 'good', 'bad', 'bad', 'good', 'bad'))
xx.formula <- compareCluster(Entrez~group, data=mydf,
fun='groupGO', OrgDb='org.Hs.eg.db') # takes a minute or so
str(xx.formula) # 44 obs. of 7 variables
as.data.frame(xx.formula)
## formula interface with more than one grouping variable
xx.formula.twogroups <- compareCluster(Entrez~group+othergroup, data=mydf,
fun='groupGO', OrgDb='org.Hs.eg.db')
str(xx.formula.twogroups) # 88 obs. of 8 variables
# as.data.frame(xx.formula.twogroups) # takes a minute or so
## End(Not run)
# my code
load(file="DEGlist.RData")
str(DEGlist) # now list of 19 (blanks are gone)
xxx <- clusterProfiler::compareCluster(DEGlist, fun="enrichKEGG", organism="ath", qvalueCutoff=0.05, pvalueCutoff=0.2)
str(xxx) # 14 obs. of 10 variables
as.data.frame(xxx)```{r try.clusterProfiler.pdf.pg11.enrichGO, eval=FALSEdoallCPchunks} # FALSE as of 2019-0304, I believe Yu changed his enrichGO(), error = unused arg (keytype=“TAIR”) # takes time 1:15 displayKnitStatus()
9.1 Not run:
data(geneList) str(geneList) head(geneList) de <- names(geneList)[1:100] yy <- enrichGO(de, ‘org.Hs.eg.db’, ont=“BP”, pvalueCutoff=0.01) head(yy) ## End(Not run)
10 my code
load(file=“descv.RData”) de = names(descv)[1:100] de = names(descv) if (length(de) == 100) { Cutoff = 1.0 } else { Cutoff = 0.55 # 0.01 # try 1.0 if needed } Cutoff yyy = clusterProfiler::enrichGO(de, OrgDb = ‘org.At.tair.db’, keytype=“TAIR”, ont=“MF”, pAdjustMethod = “BH”, qvalueCutoff=Cutoff, pvalueCutoff=Cutoff) ego = yyy # ego is for visualization str(yyy) # yyy@result str(yyy@result) # commented 2018-0620 no more slots on this object yyy@result[,c(1:7,9)] # commented 2018-0620 no more slots on this object # head(summary(yyy)) yyy2 = DOSE::setReadable(yyy, OrgDb = ‘org.At.tair.db’, keytype=“TAIR”) str(yyy2) # head(summary(yyy2)) save(ego, file=“ego.RData”) # save for clusterProfiler visualization ```
load("ego.RData")
data(geneList)
# clusterProfiler Visualization
barplot(ego, showCategory=8)
dotplot(ego)
DOSE::enrichMap(ego) # will be removed in next version, use emapplot## Warning: enrichMap will be removed in the next version; please use emapplotemapplot(ego)
cnetplot(ego, categorySize="pvalue", foldChange=geneList)
plotGOgraph(ego)## Loading required package: topGO## Loading required package: graph##
## Attaching package: 'graph'## The following objects are masked from 'package:ape':
##
## complement, edges## The following object is masked from 'package:Biostrings':
##
## complement## Loading required package: SparseM##
## Attaching package: 'SparseM'## The following object is masked from 'package:base':
##
## backsolve##
## groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.##
## Attaching package: 'topGO'## The following object is masked from 'package:GenomicFeatures':
##
## genes## The following object is masked from 'package:IRanges':
##
## members##
## groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.##
## Building most specific GOs .....## ( 2333 GO terms found. )##
## Build GO DAG topology ..........## ( 2362 GO terms and 3032 relations. )##
## Annotating nodes ...............## ( 20603 genes annotated to the GO terms. )## Loading required package: Rgraphviz## Loading required package: grid##
## Attaching package: 'grid'## The following object is masked from 'package:topGO':
##
## depth## The following object is masked from 'package:BBmisc':
##
## explode##
## Attaching package: 'Rgraphviz'## The following object is masked from 'package:ShortRead':
##
## name## The following objects are masked from 'package:IRanges':
##
## from, to## The following objects are masked from 'package:S4Vectors':
##
## from, to
## $dag
## A graphNEL graph with directed edges
## Number of Nodes = 29
## Number of Edges = 36
##
## $complete.dag
## [1] "A graph with 29 nodes."# and run all of the clusterProfiler Visualizations again to save to file
# if this takes too much time, use the html code to display the files
grDevices::pdf("results/cP_ego_barplot.pdf")
barplot(ego, showCategory=8)
dev.off()## png
## 2grDevices::pdf("results/cP_ego_dotplot.pdf")
dotplot(ego)
dev.off()## png
## 2#grDevices::pdf("results/cP_ego_enrichMap.pdf")
#clusterProfiler::enrichMap(ego)
#dev.off()
grDevices::pdf("results/cP_ego_cnetplot.pdf")
cnetplot(ego, categorySize="pvalue", foldChange=geneList)
dev.off()## png
## 2grDevices::pdf("results/cP_ego_plotGOgraph.pdf")
plotGOgraph(ego)##
## groupGOTerms: GOBPTerm, GOMFTerm, GOCCTerm environments built.##
## Building most specific GOs .....## ( 2333 GO terms found. )##
## Build GO DAG topology ..........## ( 2362 GO terms and 3032 relations. )##
## Annotating nodes ...............## ( 20603 genes annotated to the GO terms. )## $dag
## A graphNEL graph with directed edges
## Number of Nodes = 29
## Number of Edges = 36
##
## $complete.dag
## [1] "A graph with 29 nodes."dev.off()## png
## 2# takes time <:03 # eval=T is ok
## Not run:
data(geneList)
head(geneList)## 1095_s_at 1130_at 1196_at 1329_s_at 1340_s_at 1342_g_at
## 1.0000000 1.0000000 0.6223795 0.5412240 1.0000000 1.0000000de <- names(geneList)[1:100]
de <- names(geneList)
# head(de)
yy <- enrichKEGG(de, qvalueCutoff=1, pvalueCutoff=1)## --> No gene can be mapped....## --> Expected input gene ID: 84532,8789,130589,9562,51104,5161## --> return NULL...eKEGG = yy
head(yy)## NULL# plot(yy) # where does this output to? # needs X11
# grDevices::pdf("results/cP_eKEGG_plot.pdf")
# plot(eKEGG) # made a blank page, nothing to plot in eKEGG, error in knit - needs finite xlim
# dev.off()
## End(Not run)
# my code
load(file="descv.RData")
length(names(descv))## [1] 28279de = names(descv)[1:100]
de = names(descv)
head(de)## [1] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" "AT3G18710" "AT4G25880"if (length(de) == 100) {
Cutoff = 1.0
} else {
Cutoff = 0.01 # try 1.0 if needed
}## debug at <text>#27: Cutoff = 0.01Cutoff## [1] 0.01yyy = clusterProfiler::enrichKEGG(de, organism='ath', pvalueCutoff=Cutoff, qvalueCutoff=Cutoff)
str(yyy)## Formal class 'enrichResult' [package "DOSE"] with 12 slots
## ..@ result :'data.frame': 113 obs. of 9 variables:
## .. ..$ ID : chr [1:113] "ath04075" "ath01230" "ath04141" "ath03040" ...
## .. ..$ Description: chr [1:113] "Plant hormone signal transduction" "Biosynthesis of amino acids" "Protein processing in endoplasmic reticulum" "Spliceosome" ...
## .. ..$ GeneRatio : chr [1:113] "273/4836" "250/4836" "211/4836" "192/4836" ...
## .. ..$ BgRatio : chr [1:113] "273/4999" "250/4999" "211/4999" "192/4999" ...
## .. ..$ pvalue : num [1:113] 9.05e-05 2.03e-04 7.86e-04 1.52e-03 3.12e-03 ...
## .. ..$ p.adjust : num [1:113] 0.0102 0.0114 0.0296 0.0428 0.0542 ...
## .. ..$ qvalue : num [1:113] 0.00877 0.00981 0.02538 0.0367 0.04645 ...
## .. ..$ geneID : chr [1:113] "AT2G38310/AT1G72450/AT1G04310/AT4G27260/AT4G34800/AT1G75580/AT1G22070/AT3G16500/AT2G01830/AT4G34750/AT2G16580/A"| __truncated__ "AT2G43750/AT2G17630/AT1G09795/AT4G23590/AT1G72330/AT4G34200/AT1G08630/AT3G03780/AT4G35640/AT5G14060/AT3G60100/A"| __truncated__ "AT3G55380/AT3G20920/AT5G14030/AT4G29330/AT3G08690/AT1G09210/AT5G05470/AT4G27670/AT2G47470/AT1G43140/AT4G34100/A"| __truncated__ "AT3G50670/AT4G20440/AT3G15010/AT5G37370/AT5G57370/AT4G39680/AT5G41770/AT1G55310/AT2G47580/AT1G51380/AT5G08290/A"| __truncated__ ...
## .. ..$ Count : int [1:113] 273 250 211 192 171 170 167 165 264 144 ...
## ..@ pvalueCutoff : num 0.01
## ..@ pAdjustMethod: chr "BH"
## ..@ qvalueCutoff : num 0.01
## ..@ organism : chr "ath"
## ..@ ontology : chr "KEGG"
## ..@ gene : chr [1:28279] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" ...
## ..@ keytype : chr "kegg"
## ..@ universe : chr [1:4999] "AT1G01090" "AT1G09780" "AT1G09870" "AT1G12000" ...
## ..@ gene2Symbol : chr(0)
## ..@ geneSets :List of 136
## .. ..$ ath00010: chr [1:116] "AT1G01090" "AT1G09780" "AT1G09870" "AT1G12000" ...
## .. ..$ ath00020: chr [1:63] "AT1G01090" "AT1G04410" "AT1G09430" "AT1G10670" ...
## .. ..$ ath00030: chr [1:58] "AT1G09420" "AT1G12000" "AT1G12230" "AT1G13700" ...
## .. ..$ ath00040: chr [1:96] "AT1G02790" "AT1G02810" "AT1G04680" "AT1G05650" ...
## .. ..$ ath00051: chr [1:64] "AT1G01220" "AT1G02310" "AT1G06020" "AT1G06030" ...
## .. ..$ ath00052: chr [1:57] "AT1G09350" "AT1G12240" "AT1G12780" "AT1G23190" ...
## .. ..$ ath00053: chr [1:53] "AT1G07890" "AT1G14520" "AT1G19550" "AT1G19570" ...
## .. ..$ ath00061: chr [1:41] "AT1G08510" "AT1G24360" "AT1G36160" "AT1G36180" ...
## .. ..$ ath00062: chr [1:45] "AT1G01120" "AT1G01710" "AT1G04220" "AT1G07720" ...
## .. ..$ ath00071: chr [1:47] "AT1G04710" "AT1G06290" "AT1G06310" "AT1G22430" ...
## .. ..$ ath00072: chr [1:4] "AT2G26800" "AT4G11820" "AT5G47720" "AT5G48230"
## .. ..$ ath00073: chr [1:31] "AT1G01600" "AT1G02190" "AT1G02205" "AT1G23240" ...
## .. ..$ ath00100: chr [1:34] "AT1G07420" "AT1G11680" "AT1G20050" "AT1G20330" ...
## .. ..$ ath00130: chr [1:38] "AT1G06570" "AT1G18870" "AT1G23360" "AT1G30520" ...
## .. ..$ ath00190: chr [1:160] "AT1G01050" "AT1G02410" "AT1G04630" "AT1G12840" ...
## .. ..$ ath00195: chr [1:77] "AT1G03130" "AT1G03600" "AT1G06680" "AT1G08380" ...
## .. ..$ ath00196: chr [1:22] "AT1G15820" "AT1G19150" "AT1G29910" "AT1G29920" ...
## .. ..$ ath00220: chr [1:36] "AT1G17290" "AT1G23310" "AT1G44820" "AT1G48470" ...
## .. ..$ ath00230: chr [1:100] "AT1G09830" "AT1G14230" "AT1G14240" "AT1G14250" ...
## .. ..$ ath00232: chr [1:3] "AT2G26230" "AT4G34890" "AT4G34900"
## .. ..$ ath00240: chr [1:57] "AT1G14230" "AT1G14240" "AT1G14250" "AT1G26190" ...
## .. ..$ ath00250: chr [1:49] "AT1G17290" "AT1G23310" "AT1G29900" "AT1G36280" ...
## .. ..$ ath00260: chr [1:70] "AT1G08630" "AT1G09780" "AT1G11860" "AT1G12550" ...
## .. ..$ ath00261: chr [1:14] "AT1G14810" "AT1G19920" "AT1G31230" "AT2G44040" ...
## .. ..$ ath00270: chr [1:116] "AT1G01480" "AT1G02500" "AT1G04410" "AT1G05010" ...
## .. ..$ ath00280: chr [1:51] "AT1G03090" "AT1G04710" "AT1G06550" "AT1G10060" ...
## .. ..$ ath00290: chr [1:22] "AT1G10060" "AT1G10070" "AT1G18500" "AT1G31180" ...
## .. ..$ ath00300: chr [1:15] "AT1G14810" "AT1G31230" "AT2G13810" "AT2G44040" ...
## .. ..$ ath00310: chr [1:34] "AT1G02580" "AT1G17770" "AT1G23800" "AT1G44170" ...
## .. ..$ ath00330: chr [1:54] "AT1G08980" "AT1G20270" "AT1G23800" "AT1G23820" ...
## .. ..$ ath00340: chr [1:18] "AT1G09795" "AT1G23800" "AT1G31860" "AT1G43710" ...
## .. ..$ ath00350: chr [1:40] "AT1G06570" "AT1G12050" "AT1G22430" "AT1G22440" ...
## .. ..$ ath00360: chr [1:44] "AT1G06570" "AT1G08980" "AT1G24735" "AT1G31670" ...
## .. ..$ ath00380: chr [1:60] "AT1G04180" "AT1G04580" "AT1G04610" "AT1G08980" ...
## .. ..$ ath00400: chr [1:56] "AT1G07780" "AT1G08250" "AT1G11790" "AT1G15710" ...
## .. ..$ ath00410: chr [1:44] "AT1G06550" "AT1G23800" "AT1G23820" "AT1G31670" ...
## .. ..$ ath00430: chr [1:14] "AT1G18490" "AT1G65960" "AT1G69820" "AT2G02000" ...
## .. ..$ ath00440: chr [1:6] "AT1G13560" "AT2G32260" "AT2G38670" "AT3G25585" ...
## .. ..$ ath00450: chr [1:18] "AT1G08490" "AT1G19920" "AT1G33320" "AT1G64660" ...
## .. ..$ ath00460: chr [1:67] "AT1G02850" "AT1G22020" "AT1G26560" "AT1G36370" ...
## .. ..$ ath00480: chr [1:102] "AT1G02920" "AT1G02930" "AT1G02940" "AT1G02950" ...
## .. ..$ ath00500: chr [1:165] "AT1G02850" "AT1G03310" "AT1G04920" "AT1G05610" ...
## .. ..$ ath00510: chr [1:44] "AT1G02145" "AT1G11560" "AT1G12990" "AT1G16570" ...
## .. ..$ ath00511: chr [1:19] "AT1G05590" "AT1G33700" "AT1G65590" "AT1G67830" ...
## .. ..$ ath00514: chr [1:13] "AT1G17270" "AT1G19360" "AT1G53770" "AT1G75110" ...
## .. ..$ ath00520: chr [1:131] "AT1G01220" "AT1G02000" "AT1G02730" "AT1G05590" ...
## .. ..$ ath00531: chr [1:7] "AT1G05590" "AT1G65590" "AT1G72990" "AT3G52840" ...
## .. ..$ ath00561: chr [1:60] "AT1G01610" "AT1G02390" "AT1G06520" "AT1G12640" ...
## .. ..$ ath00562: chr [1:78] "AT1G01460" "AT1G07230" "AT1G09870" "AT1G10900" ...
## .. ..$ ath00563: chr [1:24] "AT1G08750" "AT1G11880" "AT1G12730" "AT1G16040" ...
## .. ..$ ath00564: chr [1:97] "AT1G01610" "AT1G02390" "AT1G06520" "AT1G07230" ...
## .. ..$ ath00565: chr [1:27] "AT1G07230" "AT1G12640" "AT1G13560" "AT1G52570" ...
## .. ..$ ath00590: chr [1:17] "AT1G63460" "AT1G69820" "AT2G06925" "AT2G25080" ...
## .. ..$ ath00591: chr [1:9] "AT1G17420" "AT1G55020" "AT1G67560" "AT1G72520" ...
## .. ..$ ath00592: chr [1:43] "AT1G04710" "AT1G06290" "AT1G06310" "AT1G09400" ...
## .. ..$ ath00600: chr [1:27] "AT1G07380" "AT1G14290" "AT1G27980" "AT1G33700" ...
## .. ..$ ath00601: chr [1:3] "AT1G61050" "AT2G38150" "AT3G09020"
## .. ..$ ath00603: chr [1:9] "AT1G05590" "AT1G61050" "AT1G65590" "AT2G38150" ...
## .. ..$ ath00604: chr [1:5] "AT1G05590" "AT1G65590" "AT1G72990" "AT3G52840" ...
## .. ..$ ath00620: chr [1:86] "AT1G01090" "AT1G04410" "AT1G06130" "AT1G08110" ...
## .. ..$ ath00630: chr [1:78] "AT1G04410" "AT1G11860" "AT1G12550" "AT1G17650" ...
## .. ..$ ath00640: chr [1:37] "AT1G06550" "AT1G21400" "AT1G36160" "AT1G36180" ...
## .. ..$ ath00650: chr [1:18] "AT1G17650" "AT1G65960" "AT1G79440" "AT2G02000" ...
## .. ..$ ath00660: chr [1:7] "AT1G31180" "AT1G80560" "AT2G31810" "AT2G43090" ...
## .. ..$ ath00670: chr [1:20] "AT1G11860" "AT1G22020" "AT1G31220" "AT1G36370" ...
## .. ..$ ath00710: chr [1:69] "AT1G04410" "AT1G12900" "AT1G13440" "AT1G16300" ...
## .. ..$ ath00730: chr [1:21] "AT1G02880" "AT1G22940" "AT1G67440" "AT2G29630" ...
## .. ..$ ath00740: chr [1:18] "AT1G14700" "AT1G25230" "AT1G79790" "AT2G01880" ...
## .. ..$ ath00750: chr [1:15] "AT1G17710" "AT1G72810" "AT1G73010" "AT2G17630" ...
## .. ..$ ath00760: chr [1:16] "AT1G21640" "AT1G55090" "AT1G72880" "AT1G78590" ...
## .. ..$ ath00770: chr [1:28] "AT1G10060" "AT1G10070" "AT1G12350" "AT1G48605" ...
## .. ..$ ath00780: chr [1:16] "AT1G24360" "AT1G37150" "AT1G74960" "AT2G04540" ...
## .. ..$ ath00785: chr [1:5] "AT1G04640" "AT1G47578" "AT2G20860" "AT4G31050" ...
## .. ..$ ath00790: chr [1:26] "AT1G01290" "AT1G16540" "AT1G69190" "AT1G78660" ...
## .. ..$ ath00860: chr [1:53] "AT1G03475" "AT1G03630" "AT1G04620" "AT1G08520" ...
## .. ..$ ath00900: chr [1:59] "AT1G11755" "AT1G17050" "AT1G31910" "AT1G49530" ...
## .. ..$ ath00901: chr [1:4] "AT1G74000" "AT1G74010" "AT1G74020" "AT2G20340"
## .. ..$ ath00902: chr [1:7] "AT1G61680" "AT2G24190" "AT2G24210" "AT3G25810" ...
## .. ..$ ath00903: chr [1:6] "AT1G23800" "AT1G44170" "AT3G48000" "AT4G16210" ...
## .. ..$ ath00904: chr [1:22] "AT1G02400" "AT1G05160" "AT1G15550" "AT1G30040" ...
## .. ..$ ath00905: chr [1:8] "AT2G26710" "AT2G38050" "AT3G13730" "AT3G30180" ...
## .. ..$ ath00906: chr [1:29] "AT1G03055" "AT1G06820" "AT1G08550" "AT1G10830" ...
## .. ..$ ath00908: chr [1:23] "AT1G22400" "AT1G25410" "AT1G67110" "AT1G68460" ...
## .. ..$ ath00909: chr [1:23] "AT1G58440" "AT1G78500" "AT1G78950" "AT1G78955" ...
## .. ..$ ath00910: chr [1:43] "AT1G08065" "AT1G08080" "AT1G08090" "AT1G08100" ...
## .. ..$ ath00920: chr [1:39] "AT1G16460" "AT1G19920" "AT1G33320" "AT1G53580" ...
## .. ..$ ath00940: chr [1:167] "AT1G02850" "AT1G05240" "AT1G05250" "AT1G05260" ...
## .. ..$ ath00941: chr [1:22] "AT1G24735" "AT1G61720" "AT1G67980" "AT2G30490" ...
## .. ..$ ath00942: chr [1:2] "AT4G14090" "AT5G54060"
## .. ..$ ath00944: chr [1:4] "AT1G30530" "AT2G36790" "AT5G07990" "AT5G17050"
## .. ..$ ath00945: chr [1:7] "AT1G24735" "AT1G67980" "AT2G30490" "AT2G40890" ...
## .. ..$ ath00950: chr [1:22] "AT1G31670" "AT1G31690" "AT1G31710" "AT1G62800" ...
## .. ..$ ath00960: chr [1:35] "AT1G07450" "AT1G31670" "AT1G31690" "AT1G31710" ...
## .. ..$ ath00965: chr [1:2] "AT2G20340" "AT4G15093"
## .. ..$ ath00966: chr [1:23] "AT1G10060" "AT1G10070" "AT1G16400" "AT1G16410" ...
## .. ..$ ath00970: chr [1:115] "AT1G09620" "AT1G11870" "AT1G14610" "AT1G17960" ...
## .. ..$ ath00999: chr [1:2] "AT1G32100" "AT4G13660"
## .. ..$ ath01040: chr [1:24] "AT1G01710" "AT1G04710" "AT1G06290" "AT1G06310" ...
## .. ..$ ath01100: chr [1:1981] "AT1G01090" "AT1G01120" "AT1G01220" "AT1G01290" ...
## .. .. [list output truncated]
## ..@ readable : logi FALSE# head(summary(yyy))
yyy2 = DOSE::setReadable(yyy, OrgDb = 'org.At.tair.db', keytype="TAIR")
str(yyy2)## Formal class 'enrichResult' [package "DOSE"] with 12 slots
## ..@ result :'data.frame': 113 obs. of 9 variables:
## .. ..$ ID : chr [1:113] "ath04075" "ath01230" "ath04141" "ath03040" ...
## .. ..$ Description: chr [1:113] "Plant hormone signal transduction" "Biosynthesis of amino acids" "Protein processing in endoplasmic reticulum" "Spliceosome" ...
## .. ..$ GeneRatio : chr [1:113] "273/4836" "250/4836" "211/4836" "192/4836" ...
## .. ..$ BgRatio : chr [1:113] "273/4999" "250/4999" "211/4999" "192/4999" ...
## .. ..$ pvalue : num [1:113] 9.05e-05 2.03e-04 7.86e-04 1.52e-03 3.12e-03 ...
## .. ..$ p.adjust : num [1:113] 0.0102 0.0114 0.0296 0.0428 0.0542 ...
## .. ..$ qvalue : num [1:113] 0.00877 0.00981 0.02538 0.0367 0.04645 ...
## .. ..$ geneID : chr [1:113] "PYL4/JAZ6/ERS2/GH3.5/SAUR4/SAUR51/TGA3/IAA26/AHK4/SAUR49/SAUR8/NA/APRR4/SAUR71/JAZ9/ATMAPK6/ATNPR3/NA/IAA6/NA/A"| __truncated__ "ACS1/PSAT2/ATATP-PRT2/NA/ALAAT2/EDA9/THA1/ATMS2/ATSERAT3;2/CARAB-AK-LYS/CSY5/IDH-IV/SHM7/RPI2/ATSERAT1;1/AtFBA8"| __truncated__ "UBC14/NA/NA/DER1/ATUBC11/AtCRT1b/ATEIF2-A2/HSP21/ATPDI11/NA/CER9/ATPDI6/NA/CEF/STT3A/DSK2a/HSP18.2/ASK7/ASK1/AS"| __truncated__ "U1-70K/smB/NA/ATSRL1/NA/NA/NA/At-SCL33/U1A/NA/YLS8/SMP1/ATU2AF35B/AtHPR1/MAC5C/LSM6B/At-SC35/NA/NA/NA/At-SCL28/"| __truncated__ ...
## .. ..$ Count : int [1:113] 273 250 211 192 171 170 167 165 264 144 ...
## ..@ pvalueCutoff : num 0.01
## ..@ pAdjustMethod: chr "BH"
## ..@ qvalueCutoff : num 0.01
## ..@ organism : chr "ath"
## ..@ ontology : chr "KEGG"
## ..@ gene : chr [1:28279] "AT5G16970" "AT4G32100" "AT2G43120" "AT1G30814" ...
## ..@ keytype : chr "TAIR"
## ..@ universe : chr [1:4999] "AT1G01090" "AT1G09780" "AT1G09870" "AT1G12000" ...
## ..@ gene2Symbol : Named chr [1:37280] "AER" "AT-AER" NA NA ...
## .. ..- attr(*, "names")= chr [1:37280] "AT5G16970" "AT5G16970" "AT4G32100" "AT2G43120" ...
## ..@ geneSets :List of 136
## .. ..$ ath00010: chr [1:116] "AT1G01090" "AT1G09780" "AT1G09870" "AT1G12000" ...
## .. ..$ ath00020: chr [1:63] "AT1G01090" "AT1G04410" "AT1G09430" "AT1G10670" ...
## .. ..$ ath00030: chr [1:58] "AT1G09420" "AT1G12000" "AT1G12230" "AT1G13700" ...
## .. ..$ ath00040: chr [1:96] "AT1G02790" "AT1G02810" "AT1G04680" "AT1G05650" ...
## .. ..$ ath00051: chr [1:64] "AT1G01220" "AT1G02310" "AT1G06020" "AT1G06030" ...
## .. ..$ ath00052: chr [1:57] "AT1G09350" "AT1G12240" "AT1G12780" "AT1G23190" ...
## .. ..$ ath00053: chr [1:53] "AT1G07890" "AT1G14520" "AT1G19550" "AT1G19570" ...
## .. ..$ ath00061: chr [1:41] "AT1G08510" "AT1G24360" "AT1G36160" "AT1G36180" ...
## .. ..$ ath00062: chr [1:45] "AT1G01120" "AT1G01710" "AT1G04220" "AT1G07720" ...
## .. ..$ ath00071: chr [1:47] "AT1G04710" "AT1G06290" "AT1G06310" "AT1G22430" ...
## .. ..$ ath00072: chr [1:4] "AT2G26800" "AT4G11820" "AT5G47720" "AT5G48230"
## .. ..$ ath00073: chr [1:31] "AT1G01600" "AT1G02190" "AT1G02205" "AT1G23240" ...
## .. ..$ ath00100: chr [1:34] "AT1G07420" "AT1G11680" "AT1G20050" "AT1G20330" ...
## .. ..$ ath00130: chr [1:38] "AT1G06570" "AT1G18870" "AT1G23360" "AT1G30520" ...
## .. ..$ ath00190: chr [1:160] "AT1G01050" "AT1G02410" "AT1G04630" "AT1G12840" ...
## .. ..$ ath00195: chr [1:77] "AT1G03130" "AT1G03600" "AT1G06680" "AT1G08380" ...
## .. ..$ ath00196: chr [1:22] "AT1G15820" "AT1G19150" "AT1G29910" "AT1G29920" ...
## .. ..$ ath00220: chr [1:36] "AT1G17290" "AT1G23310" "AT1G44820" "AT1G48470" ...
## .. ..$ ath00230: chr [1:100] "AT1G09830" "AT1G14230" "AT1G14240" "AT1G14250" ...
## .. ..$ ath00232: chr [1:3] "AT2G26230" "AT4G34890" "AT4G34900"
## .. ..$ ath00240: chr [1:57] "AT1G14230" "AT1G14240" "AT1G14250" "AT1G26190" ...
## .. ..$ ath00250: chr [1:49] "AT1G17290" "AT1G23310" "AT1G29900" "AT1G36280" ...
## .. ..$ ath00260: chr [1:70] "AT1G08630" "AT1G09780" "AT1G11860" "AT1G12550" ...
## .. ..$ ath00261: chr [1:14] "AT1G14810" "AT1G19920" "AT1G31230" "AT2G44040" ...
## .. ..$ ath00270: chr [1:116] "AT1G01480" "AT1G02500" "AT1G04410" "AT1G05010" ...
## .. ..$ ath00280: chr [1:51] "AT1G03090" "AT1G04710" "AT1G06550" "AT1G10060" ...
## .. ..$ ath00290: chr [1:22] "AT1G10060" "AT1G10070" "AT1G18500" "AT1G31180" ...
## .. ..$ ath00300: chr [1:15] "AT1G14810" "AT1G31230" "AT2G13810" "AT2G44040" ...
## .. ..$ ath00310: chr [1:34] "AT1G02580" "AT1G17770" "AT1G23800" "AT1G44170" ...
## .. ..$ ath00330: chr [1:54] "AT1G08980" "AT1G20270" "AT1G23800" "AT1G23820" ...
## .. ..$ ath00340: chr [1:18] "AT1G09795" "AT1G23800" "AT1G31860" "AT1G43710" ...
## .. ..$ ath00350: chr [1:40] "AT1G06570" "AT1G12050" "AT1G22430" "AT1G22440" ...
## .. ..$ ath00360: chr [1:44] "AT1G06570" "AT1G08980" "AT1G24735" "AT1G31670" ...
## .. ..$ ath00380: chr [1:60] "AT1G04180" "AT1G04580" "AT1G04610" "AT1G08980" ...
## .. ..$ ath00400: chr [1:56] "AT1G07780" "AT1G08250" "AT1G11790" "AT1G15710" ...
## .. ..$ ath00410: chr [1:44] "AT1G06550" "AT1G23800" "AT1G23820" "AT1G31670" ...
## .. ..$ ath00430: chr [1:14] "AT1G18490" "AT1G65960" "AT1G69820" "AT2G02000" ...
## .. ..$ ath00440: chr [1:6] "AT1G13560" "AT2G32260" "AT2G38670" "AT3G25585" ...
## .. ..$ ath00450: chr [1:18] "AT1G08490" "AT1G19920" "AT1G33320" "AT1G64660" ...
## .. ..$ ath00460: chr [1:67] "AT1G02850" "AT1G22020" "AT1G26560" "AT1G36370" ...
## .. ..$ ath00480: chr [1:102] "AT1G02920" "AT1G02930" "AT1G02940" "AT1G02950" ...
## .. ..$ ath00500: chr [1:165] "AT1G02850" "AT1G03310" "AT1G04920" "AT1G05610" ...
## .. ..$ ath00510: chr [1:44] "AT1G02145" "AT1G11560" "AT1G12990" "AT1G16570" ...
## .. ..$ ath00511: chr [1:19] "AT1G05590" "AT1G33700" "AT1G65590" "AT1G67830" ...
## .. ..$ ath00514: chr [1:13] "AT1G17270" "AT1G19360" "AT1G53770" "AT1G75110" ...
## .. ..$ ath00520: chr [1:131] "AT1G01220" "AT1G02000" "AT1G02730" "AT1G05590" ...
## .. ..$ ath00531: chr [1:7] "AT1G05590" "AT1G65590" "AT1G72990" "AT3G52840" ...
## .. ..$ ath00561: chr [1:60] "AT1G01610" "AT1G02390" "AT1G06520" "AT1G12640" ...
## .. ..$ ath00562: chr [1:78] "AT1G01460" "AT1G07230" "AT1G09870" "AT1G10900" ...
## .. ..$ ath00563: chr [1:24] "AT1G08750" "AT1G11880" "AT1G12730" "AT1G16040" ...
## .. ..$ ath00564: chr [1:97] "AT1G01610" "AT1G02390" "AT1G06520" "AT1G07230" ...
## .. ..$ ath00565: chr [1:27] "AT1G07230" "AT1G12640" "AT1G13560" "AT1G52570" ...
## .. ..$ ath00590: chr [1:17] "AT1G63460" "AT1G69820" "AT2G06925" "AT2G25080" ...
## .. ..$ ath00591: chr [1:9] "AT1G17420" "AT1G55020" "AT1G67560" "AT1G72520" ...
## .. ..$ ath00592: chr [1:43] "AT1G04710" "AT1G06290" "AT1G06310" "AT1G09400" ...
## .. ..$ ath00600: chr [1:27] "AT1G07380" "AT1G14290" "AT1G27980" "AT1G33700" ...
## .. ..$ ath00601: chr [1:3] "AT1G61050" "AT2G38150" "AT3G09020"
## .. ..$ ath00603: chr [1:9] "AT1G05590" "AT1G61050" "AT1G65590" "AT2G38150" ...
## .. ..$ ath00604: chr [1:5] "AT1G05590" "AT1G65590" "AT1G72990" "AT3G52840" ...
## .. ..$ ath00620: chr [1:86] "AT1G01090" "AT1G04410" "AT1G06130" "AT1G08110" ...
## .. ..$ ath00630: chr [1:78] "AT1G04410" "AT1G11860" "AT1G12550" "AT1G17650" ...
## .. ..$ ath00640: chr [1:37] "AT1G06550" "AT1G21400" "AT1G36160" "AT1G36180" ...
## .. ..$ ath00650: chr [1:18] "AT1G17650" "AT1G65960" "AT1G79440" "AT2G02000" ...
## .. ..$ ath00660: chr [1:7] "AT1G31180" "AT1G80560" "AT2G31810" "AT2G43090" ...
## .. ..$ ath00670: chr [1:20] "AT1G11860" "AT1G22020" "AT1G31220" "AT1G36370" ...
## .. ..$ ath00710: chr [1:69] "AT1G04410" "AT1G12900" "AT1G13440" "AT1G16300" ...
## .. ..$ ath00730: chr [1:21] "AT1G02880" "AT1G22940" "AT1G67440" "AT2G29630" ...
## .. ..$ ath00740: chr [1:18] "AT1G14700" "AT1G25230" "AT1G79790" "AT2G01880" ...
## .. ..$ ath00750: chr [1:15] "AT1G17710" "AT1G72810" "AT1G73010" "AT2G17630" ...
## .. ..$ ath00760: chr [1:16] "AT1G21640" "AT1G55090" "AT1G72880" "AT1G78590" ...
## .. ..$ ath00770: chr [1:28] "AT1G10060" "AT1G10070" "AT1G12350" "AT1G48605" ...
## .. ..$ ath00780: chr [1:16] "AT1G24360" "AT1G37150" "AT1G74960" "AT2G04540" ...
## .. ..$ ath00785: chr [1:5] "AT1G04640" "AT1G47578" "AT2G20860" "AT4G31050" ...
## .. ..$ ath00790: chr [1:26] "AT1G01290" "AT1G16540" "AT1G69190" "AT1G78660" ...
## .. ..$ ath00860: chr [1:53] "AT1G03475" "AT1G03630" "AT1G04620" "AT1G08520" ...
## .. ..$ ath00900: chr [1:59] "AT1G11755" "AT1G17050" "AT1G31910" "AT1G49530" ...
## .. ..$ ath00901: chr [1:4] "AT1G74000" "AT1G74010" "AT1G74020" "AT2G20340"
## .. ..$ ath00902: chr [1:7] "AT1G61680" "AT2G24190" "AT2G24210" "AT3G25810" ...
## .. ..$ ath00903: chr [1:6] "AT1G23800" "AT1G44170" "AT3G48000" "AT4G16210" ...
## .. ..$ ath00904: chr [1:22] "AT1G02400" "AT1G05160" "AT1G15550" "AT1G30040" ...
## .. ..$ ath00905: chr [1:8] "AT2G26710" "AT2G38050" "AT3G13730" "AT3G30180" ...
## .. ..$ ath00906: chr [1:29] "AT1G03055" "AT1G06820" "AT1G08550" "AT1G10830" ...
## .. ..$ ath00908: chr [1:23] "AT1G22400" "AT1G25410" "AT1G67110" "AT1G68460" ...
## .. ..$ ath00909: chr [1:23] "AT1G58440" "AT1G78500" "AT1G78950" "AT1G78955" ...
## .. ..$ ath00910: chr [1:43] "AT1G08065" "AT1G08080" "AT1G08090" "AT1G08100" ...
## .. ..$ ath00920: chr [1:39] "AT1G16460" "AT1G19920" "AT1G33320" "AT1G53580" ...
## .. ..$ ath00940: chr [1:167] "AT1G02850" "AT1G05240" "AT1G05250" "AT1G05260" ...
## .. ..$ ath00941: chr [1:22] "AT1G24735" "AT1G61720" "AT1G67980" "AT2G30490" ...
## .. ..$ ath00942: chr [1:2] "AT4G14090" "AT5G54060"
## .. ..$ ath00944: chr [1:4] "AT1G30530" "AT2G36790" "AT5G07990" "AT5G17050"
## .. ..$ ath00945: chr [1:7] "AT1G24735" "AT1G67980" "AT2G30490" "AT2G40890" ...
## .. ..$ ath00950: chr [1:22] "AT1G31670" "AT1G31690" "AT1G31710" "AT1G62800" ...
## .. ..$ ath00960: chr [1:35] "AT1G07450" "AT1G31670" "AT1G31690" "AT1G31710" ...
## .. ..$ ath00965: chr [1:2] "AT2G20340" "AT4G15093"
## .. ..$ ath00966: chr [1:23] "AT1G10060" "AT1G10070" "AT1G16400" "AT1G16410" ...
## .. ..$ ath00970: chr [1:115] "AT1G09620" "AT1G11870" "AT1G14610" "AT1G17960" ...
## .. ..$ ath00999: chr [1:2] "AT1G32100" "AT4G13660"
## .. ..$ ath01040: chr [1:24] "AT1G01710" "AT1G04710" "AT1G06290" "AT1G06310" ...
## .. ..$ ath01100: chr [1:1981] "AT1G01090" "AT1G01120" "AT1G01220" "AT1G01290" ...
## .. .. [list output truncated]
## ..@ readable : logi TRUE# head(summary(yyy2))```{r try.clusterProfiler.pdf.pg16.groupGO, eval=FALSEdoallCPchunks} # FALSE as of 2019-0304, I believe Yu changed his groupGO(), error = unused arg (keytype=“TAIR”) # takes time 2:00 displayKnitStatus()
10.1 Not run:
data(gcSample) yy <- groupGO(gcSample[[1]], ‘org.Hs.eg.db’, ont=“BP”, level=2) str(yy) # head(summary(yy)) #plot(yy)
11 my code
rebuild_DEGlist_deprecated <- function() { # get edgeDF from line 518 above edgeDF <- read.delim(“results/edgeRglm_allcomp.xls”, row.names=1, check.names=FALSE) str(edgeDF) summary(edgeDF) head(edgeDF) # get the DEGlist from line 626 above load(“data/GO/catdb.RData”) DEG_list <- filterDEGs(degDF=edgeDF, filter=c(Fold=2, FDR=50), plot=FALSE) str(DEG_list) # Actual DEG_list DEG_list up_down <- DEG_list\(UporDown; names(up_down) <- paste(names(up_down), "_up_down", sep="") str(up_down) # list of up_down's for 9 CMP's up_down up <- DEG_list\)Up; names(up) <- paste(names(up), “_up“, sep=”“) up down <- DEG_list$Down; names(down) <- paste(names(down),”_down“, sep=”“) down DEGlist <- c(up_down, up, down) str(DEGlist) # now list of 27 DEGlist DEGlist <- DEGlist[sapply(DEGlist, length) > 0] str(DEGlist) # now list of 19 (blanks are gone) DEGlist } load(file=”DEGlist.RData“) str(DEGlist) # now list of 19 (blanks are gone)
yyyyBP <- clusterProfiler::groupGO(DEGlist[[1]], OrgDb = ‘org.At.tair.db’, keytype=“TAIR”, ont=“BP”, level=2) ggo = yyyyBP # ggo is for the visualization head(summary(yyyyBP)) yyyyCC <- clusterProfiler::groupGO(DEGlist[[1]], OrgDb = ‘org.At.tair.db’, keytype=“TAIR”, ont=“CC”, level=2) head(summary(yyyyCC)) yyyyMF <- clusterProfiler::groupGO(DEGlist[[1]], OrgDb = ‘org.At.tair.db’, keytype=“TAIR”, ont=“MF”, level=2) head(summary(yyyyMF)) save(ggo, file=“ggo.RData”) # save for clusterProfiler visualization ```
load("ggo.RData")
# clusterProfiler Visualization
barplot(ggo, drop=TRUE, showCategory=12)
grDevices::pdf("results/cP_ggo_barplot.pdf")
barplot(ggo, drop=TRUE, showCategory=12)
dev.off()## png
## 2## End(Not run)12 Version Information
sessionInfo()## R version 3.5.0 (2018-04-23)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: CentOS Linux 7 (Core)
##
## Matrix products: default
## BLAS: /usr/lib64/libblas.so.3.4.2
## LAPACK: /usr/lib64/liblapack.so.3.4.2
##
## locale:
## [1] LC_CTYPE=en_US.utf-8 LC_NUMERIC=C LC_TIME=en_US.utf-8
## [4] LC_COLLATE=en_US.utf-8 LC_MONETARY=en_US.utf-8 LC_MESSAGES=en_US.utf-8
## [7] LC_PAPER=en_US.utf-8 LC_NAME=C LC_ADDRESS=C
## [10] LC_TELEPHONE=C LC_MEASUREMENT=en_US.utf-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] grid stats4 parallel stats graphics utils datasets grDevices methods
## [10] base
##
## other attached packages:
## [1] Rgraphviz_2.24.0 topGO_2.32.0 SparseM_1.77
## [4] graph_1.58.2 org.At.tair.db_3.6.0 org.Hs.eg.db_3.6.0
## [7] pheatmap_1.0.10 GO.db_3.6.0 biomaRt_2.36.1
## [10] edgeR_3.22.5 limma_3.36.5 DESeq2_1.20.0
## [13] GenomicFeatures_1.32.3 AnnotationDbi_1.42.1 BatchJobs_1.7
## [16] BBmisc_1.11 DOSE_3.6.1 clusterProfiler_3.8.1
## [19] ape_5.2 ggplot2_3.1.0 systemPipeR_1.15.1
## [22] ShortRead_1.38.0 GenomicAlignments_1.16.0 SummarizedExperiment_1.10.1
## [25] DelayedArray_0.6.6 matrixStats_0.54.0 Biobase_2.40.0
## [28] BiocParallel_1.14.2 Rsamtools_1.32.3 Biostrings_2.48.0
## [31] XVector_0.20.0 GenomicRanges_1.32.7 GenomeInfoDb_1.16.0
## [34] IRanges_2.14.12 S4Vectors_0.18.3 BiocGenerics_0.26.0
## [37] BiocStyle_2.8.2
##
## loaded via a namespace (and not attached):
## [1] backports_1.1.2 GOstats_2.46.0 Hmisc_4.1-1 fastmatch_1.1-0
## [5] plyr_1.8.4 igraph_1.2.1 lazyeval_0.2.1 GSEABase_1.42.0
## [9] splines_3.5.0 digest_0.6.18 htmltools_0.3.6 GOSemSim_2.6.2
## [13] viridis_0.5.1 magrittr_1.5 checkmate_1.8.5 memoise_1.1.0
## [17] cluster_2.0.7-1 annotate_1.58.0 enrichplot_1.0.2 prettyunits_1.0.2
## [21] colorspace_1.3-2 blob_1.1.1 ggrepel_0.8.0 dplyr_0.7.7
## [25] crayon_1.3.4 RCurl_1.95-4.10 genefilter_1.62.0 bindr_0.1.1
## [29] brew_1.0-6 survival_2.42-6 sendmailR_1.2-1 glue_1.3.0
## [33] gtable_0.2.0 zlibbioc_1.26.0 UpSetR_1.3.3 scales_1.0.0
## [37] DBI_1.0.0 Rcpp_0.12.19 viridisLite_0.3.0 xtable_1.8-3
## [41] progress_1.2.0 htmlTable_1.12 units_0.6-1 foreign_0.8-71
## [45] bit_1.1-14 Formula_1.2-3 AnnotationForge_1.22.2 htmlwidgets_1.3
## [49] httr_1.3.1 fgsea_1.6.0 RColorBrewer_1.1-2 acepack_1.4.1
## [53] pkgconfig_2.0.2 XML_3.98-1.11 farver_1.0 nnet_7.3-12
## [57] locfit_1.5-9.1 labeling_0.3 tidyselect_0.2.5 rlang_0.3.0.1
## [61] reshape2_1.4.3 munsell_0.5.0 tools_3.5.0 RSQLite_2.1.1
## [65] ggridges_0.5.1 evaluate_0.12 stringr_1.3.1 yaml_2.2.0
## [69] knitr_1.20 bit64_0.9-7 purrr_0.2.5 ggraph_1.0.2
## [73] bindrcpp_0.2.2 RBGL_1.56.0 nlme_3.1-137 DO.db_2.9
## [77] rstudioapi_0.8 compiler_3.5.0 curl_3.2 geneplotter_1.58.0
## [81] tibble_1.4.2 tweenr_1.0.0 stringi_1.2.4 lattice_0.20-35
## [85] Matrix_1.2-14 pillar_1.3.0 data.table_1.11.8 cowplot_0.9.3
## [89] bitops_1.0-6 rtracklayer_1.40.6 qvalue_2.12.0 R6_2.3.0
## [93] latticeExtra_0.6-28 hwriter_1.3.2 gridExtra_2.3 MASS_7.3-51
## [97] assertthat_0.2.0 Category_2.46.0 rprojroot_1.3-2 rjson_0.2.20
## [101] withr_2.1.2 GenomeInfoDbData_1.1.0 hms_0.4.2 rpart_4.1-13
## [105] tidyr_0.8.2 rmarkdown_1.10 rvcheck_0.1.1 ggforce_0.1.3
## [109] base64enc_0.1-3displayKnitStatus()13 Funding
This project was supported by funds from the National Institutes of Health (NIH).
References
H Backman, Tyler W, and Thomas Girke. 2016. “systemPipeR: NGS workflow and report generation environment.” BMC Bioinformatics 17 (1): 388. doi:10.1186/s12859-016-1241-0.
Howard, Brian E, Qiwen Hu, Ahmet Can Babaoglu, Manan Chandra, Monica Borghi, Xiaoping Tan, Luyan He, et al. 2013. “High-Throughput RNA Sequencing of Pseudomonas-Infected Arabidopsis Reveals Hidden Transcriptome Complexity and Novel Splice Variants.” PLoS One 8 (10): e74183. doi:10.1371/journal.pone.0074183.
Kim, Daehwan, Geo Pertea, Cole Trapnell, Harold Pimentel, Ryan Kelley, and Steven L Salzberg. 2013. “TopHat2: Accurate Alignment of Transcriptomes in the Presence of Insertions, Deletions and Gene Fusions.” Genome Biol. 14 (4): R36. doi:10.1186/gb-2013-14-4-r36.
Langmead, Ben, and Steven L Salzberg. 2012. “Fast Gapped-Read Alignment with Bowtie 2.” Nat. Methods 9 (4). Nature Publishing Group: 357–59. doi:10.1038/nmeth.1923.
Lawrence, Michael, Wolfgang Huber, Hervé Pagès, Patrick Aboyoun, Marc Carlson, Robert Gentleman, Martin T Morgan, and Vincent J Carey. 2013. “Software for Computing and Annotating Genomic Ranges.” PLoS Comput. Biol. 9 (8): e1003118. doi:10.1371/journal.pcbi.1003118.
Robinson, M D, D J McCarthy, and G K Smyth. 2010. “EdgeR: A Bioconductor Package for Differential Expression Analysis of Digital Gene Expression Data.” Bioinformatics 26 (1): 139–40. doi:10.1093/bioinformatics/btp616.